Pregenerated sensors for GPR20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045281Ensembl transcript IDs: ENSMUST00000064166.5
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGCAGTGGTTAGTGGGTTCAGGACTGTTCCCGGGCTGGGTCTTTaGAGTCTGAGAGGTAGCCATGGAAGCAGGAGCTGGGATGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: GAVVSGFRTVPGLGL*SLRGSHGSRSWDAG Trigger: TCCAGCATCCCAGCTCCTGCTTCCATGGCTACCTCTCAGACTCCAAAGACCCAGCCCGGGAACAGTCCTGAACCCACTAACCACTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR TCA 90 bp | TGGTTAGTGGGTTCAGGACTGTTCCCGGGCTGGGTCTTTGGAGTCTaGGAGGTAGCCATGGAAGCAGGAGCTGGGATGCTGGAGCCTGTA | + |
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Preference number: 1 (lower is better) Translates to: WLVGSGLFPGWVFGV*EVAMEAGAGMLEPV Trigger: TACAGGCTCCAGCATCCCAGCTCCTGCTTCCATGGCTACCTCTCAGACTCCAAAGACCCAGCCCGGGAACAGTCCTGAACCCACTAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR CCA 90 bp | CATGGAAGCAGGAGCTGGGATGCTGGAGCCTGTAAGATTGAGTCTTaGCACCACTATAATCCAGTGGTGGTGACTGGGTCAATTCCCCCT | + |
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Preference number: 1 (lower is better) Translates to: HGSRSWDAGACKIES*HHYNPVVVTGSIPP Trigger: AGGGGGAATTGACCCAGTCACCACCACTGGATTATAGTGGTGCCAAGACTCAATCTTACAGGCTCCAGCATCCCAGCTCCTGCTTCCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR TCA 90 bp | GGGTGTCTCCACTCCCTGTACCTAACACTATTGCCCCCAAAACATTaGCCTTCTCCTCTTGTTTCTCCATCTGCCTGTGGTGAACTCTTC | + |
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Preference number: 1 (lower is better) Translates to: GCLHSLYLTLLPPKH*PSPLVSPSACGELF Trigger: GAAGAGTTCACCACAGGCAGATGGAGAAACAAGAGGAGAAGGTCAATGTTTTGGGGGCAATAGTGTTAGGTACAGGGAGTGGAGACACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR TCA 90 bp | CCCAAAACATTGACCTTCTCCTCTTGTTTCTCCATCTGCCTGTGGTaGACTCTTCTGGTTGGGTTTAACCCTCCTGGGAGTCATCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: PKTLTFSSCFSICLW*TLLVGFNPPGSHQK Trigger: TTTCTGATGACTCCCAGGAGGGTTAAACCCAACCAGAAGAGTTCACCACAGGCAGATGGAGAAACAAGAGGAGAAGGTCAATGTTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR-3UTR TCA 90 bp | TACCCAAGTCCAACTCCTGATACACAGAGGGCCACCTTGGATTGCTATGCTGGCTCCATCTGCCTGTGGTaGACTCTTCTGGTTGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: YPSPTPDTQRATLDCYAGSICLW*TLLVGF Trigger: AAACCCAACCAGAAGAGTTCACCACAGGCAGATGGA...GCCAGCATAGCAATCCAAGGTGGCCCTCTGTGTATCAGGAGTTGGACTTGGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR-3UTR CCA 90 bp | CCAACTCCTGATACACAGAGGGCCACCTTGGATTGCTATGCTGGCCTGTGGTGTTCAATCACAGCACAGTaGGCTCAGGTTGTCAACATA | + |
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Preference number: 2 (lower is better) Translates to: PTPDTQRATLDCYAGLWCSITAQ*AQVVNI Trigger: TATGTTGACAACCTGAGCCCACTGTGCTGTGATTGA...ACACCACAGGCCAGCATAGCAATCCAAGGTGGCCCTCTGTGTATCAGGAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR-3UTR CCA 90 bp | CCATCTGCCTGTGGTGAACTCTTCTGGTTGGGTTTAACCCTCCTGGGAGTCATCGTCAACATAACACACTaGACAGCCATATCCAACGGA | + |
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Preference number: 2 (lower is better) Translates to: PSACGELFWLGLTLLGVIVNITH*TAISNG Trigger: TCCGTTGGATATGGCTGTCCAGTGTGTTATGTTGAC...GATGACTCCCAGGAGGGTTAAACCCAACCAGAAGAGTTCACCACAGGCAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR-3UTR TCA 90 bp | CATTTTCTACCACTGGAGAGGACTGTGGCCACACAGAGTCTGGGGCAGTGGTTAGAGTCATCAGAAAGTTaGTCTTTGTGCTTTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: HFLPLERTVATQSLGQWLESSES*SLCFLW Trigger: CCAGAGAAAGCACAAAGATCAACTTTCTGATGACTC...TAACCACTGCCCCAGACTCTGTGTGGCCACAGTCCTCTCCAGTGGTAGAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR CAA 90 bp | CCTTCTCCTCTTGTTTCTCCATCTGCCTGTGGTGAACTCTTCTGGTaGGGTTTAACCCTCCTGGGAGTCATCAGAAAGTTGATCTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: PSPLVSPSACGELFW*GLTLLGVIRKLIFV Trigger: CACAAAGATCAACTTTCTGATGACTCCCAGGAGGGTTAAACCCAACCAGAAGAGTTCACCACAGGCAGATGGAGAAACAAGAGGAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCTAACATTTTCTACCACTGGAGAGGACTGTGGCCACACAGAGTCTGGGGCATCTTTGTGCTTTCTCTaGAAGAGTTTCTTCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: FLTFSTTGEDCGHTESGASLCFL*KSFFRE Trigger: TTCCCTGAAGAAACTCTTCCAGAGAAAGCACAAAGA...TGCCCCAGACTCTGTGTGGCCACAGTCCTCTCCAGTGGTAGAAAATGTTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR CAA 90 bp | TCCAGCATTCATACCATTATACCCCATCTGGAGCCCTTACAGACATaGCTAATCAATCACAGCACAGTGGGCTCAGGTTGTCAACATAAC | + |
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Preference number: 2 (lower is better) Translates to: SSIHTIIPHLEPLQT*LINHSTVGSGCQHN Trigger: GTTATGTTGACAACCTGAGCCCACTGTGCTGTGATTGATTAGCAATGTCTGTAAGGGCTCCAGATGGGGTATAATGGTATGAATGCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR-3UTR GCA 90 bp | GTTGGGTTTAACCCTCCTGGGAGTCATCAGAAAGTTGATCTTTGTGCTTTCTCTACAGCCACAGGAAAGTaGAGCATCCAGCATTCATAC | + |
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Preference number: 2 (lower is better) Translates to: VGFNPPGSHQKVDLCAFSTATGK*SIQHSY Trigger: GTATGAATGCTGGATGCTGCACTTTCCTGTGGCTGT...AGAGAAAGCACAAAGATCAACTTTCTGATGACTCCCAGGAGGGTTAAACCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR CCA 72 bp | CTGGAGAGGACTGTGGCCACACAGAGTCTGGGGCAGTaGTTAGTGGGTTCAGGACTGTTCCCGGGCTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: LERTVATQSLGQ*LVGSGLFPGWV Trigger: GACCCAGCCCGGGAACAGTCCTGAACCCACTAACCACTGCCCCAGACTCTGTGTGGCCACAGTCCTCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR TCA 72 bp | GGTTCAGGACTGTTCCCGGGCTGGGTCTTTGGAGTCTaGGAGGTAGCCATGGAAGCAGGAGCTGGGATGCTG | + |
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Preference number: 3 (lower is better) Translates to: GSGLFPGWVFGV*EVAMEAGAGML Trigger: CAGCATCCCAGCTCCTGCTTCCATGGCTACCTCTCAGACTCCAAAGACCCAGCCCGGGAACAGTCCTGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR CCA 72 bp | GTTAGTGGGTTCAGGACTGTTCCCGGGCTGGGTCTTTaGAGTCTGAGAGGTAGCCATGGAAGCAGGAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VSGFRTVPGLGL*SLRGSHGSRSW Trigger: CCAGCTCCTGCTTCCATGGCTACCTCTCAGACTCCAAAGACCCAGCCCGGGAACAGTCCTGAACCCACTAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR CCA 72 bp | AGGAGCTGGGATGCTGGAGCCTGTAAGATTGAGTCTTaGCACCACTATAATCCAGTGGTGGTGACTGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: RSWDAGACKIES*HHYNPVVVTGS Trigger: TGACCCAGTCACCACCACTGGATTATAGTGGTGCCAAGACTCAATCTTACAGGCTCCAGCATCCCAGCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR-3UTR CAA 90 bp | CATTTTCTACCACTGGAGAGGACTGTGGCCACACAGAGTCTGGGGCAGTGGTTACTGGAGCCTGTAAGATaGAGTCTTGGCACCACTATA | + |
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Preference number: 3 (lower is better) Translates to: HFLPLERTVATQSLGQWLLEPVR*SLGTTI Trigger: TATAGTGGTGCCAAGACTCAATCTTACAGGCTCCAG...TAACCACTGCCCCAGACTCTGTGTGGCCACAGTCCTCTCCAGTGGTAGAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR TCA 72 bp | TTGACCTTCTCCTCTTGTTTCTCCATCTGCCTGTGGTaGACTCTTCTGGTTGGGTTTAACCCTCCTGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: LTFSSCFSICLW*TLLVGFNPPGS Trigger: ACTCCCAGGAGGGTTAAACCCAACCAGAAGAGTTCACCACAGGCAGATGGAGAAACAAGAGGAGAAGGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR CCA 72 bp | CCTCTTGTTTCTCCATCTGCCTGTGGTGAACTCTTCTaGTTGGGTTTAACCCTCCTGGGAGTCATCAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: PLVSPSACGELF*LGLTLLGVIRK Trigger: CTTTCTGATGACTCCCAGGAGGGTTAAACCCAACCAGAAGAGTTCACCACAGGCAGATGGAGAAACAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR TCA 72 bp | CACTCCCTGTACCTAACACTATTGCCCCCAAAACATTaGCCTTCTCCTCTTGTTTCTCCATCTGCCTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: HSLYLTLLPPKH*PSPLVSPSACG Trigger: ACCACAGGCAGATGGAGAAACAAGAGGAGAAGGTCAATGTTTTGGGGGCAATAGTGTTAGGTACAGGGAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR CCA 72 bp | TTGCTTTGTATCTTTATTCCTAACATTTTCTACCACTaGAGAGGACTGTGGCCACACAGAGTCTGGGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: LLCIFIPNIFYH*RGLWPHRVWGS Trigger: ACTGCCCCAGACTCTGTGTGGCCACAGTCCTCTCCAGTGGTAGAAAATGTTAGGAATAAAGATACAAAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR CCA 72 bp | ACACACAAGAATACAACTAAAACTAGCCTCTTCATTTaGGGTTGCAGTGGTTCAAATGCCAACCAGATACCC | + |
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Preference number: 3 (lower is better) Translates to: THKNTTKTSLFI*GCSGSNANQIP Trigger: GGGTATCTGGTTGGCATTTGAACCACTGCAACCCCAAATGAAGAGGCTAGTTTTAGTTGTATTCTTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR GCA 90 bp | CCATCTGCCTGTGGTGAACTCTTCTGGTTGGGTTTAACCCTCCTGGGAGTCATCACCGTGAGCAGCAGCTaGATGGCCCTCACGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: PSACGELFWLGLTLLGVITVSSS*MALTRR Trigger: GCGGCGCGTGAGGGCCATGCAGCTGCTGCTCACGGT...GATGACTCCCAGGAGGGTTAAACCCAACCAGAAGAGTTCACCACAGGCAGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR GCA 90 bp | CCAACTCCTGATACACAGAGGGCCACCTTGGATTGCTATGCTGGCCTGTGGTGTTACGTTAGGCCACAGTaGCACAGCCACCTGGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: PTPDTQRATLDCYAGLWCYVRPQ*HSHLAG Trigger: GCCCGCCAGGTGGCTGTGGCACTGTGGCCTAACGTA...ACACCACAGGCCAGCATAGCAATCCAAGGTGGCCCTCTGTGTATCAGGAGTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR CCA 90 bp | CTACCACTGGAGAGGACTGTGGCCACACAGAGTCTGGGGCAGTGGTTAGTGGGTCCGGCACACTTCCATTaGTCCATGCTGCTGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LPLERTVATQSLGQWLVGPAHFH*SMLLQW Trigger: CCACTGCAGCAGCATGGACCAATGGAAGTGTGCCGG...ACCCACTAACCACTGCCCCAGACTCTGTGTGGCCACAGTCCTCTCCAGTGGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR CCA 90 bp | TTCCTAACATTTTCTACCACTGGAGAGGACTGTGGCCACACAGAGTCTGGGGCACTGCTGCAGTGGTGTTaGGGAGTGCAGCATCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FLTFSTTGEDCGHTESGALLQWC*GVQHPR Trigger: CCTGGGATGCTGCACTCCCCAACACCACTGCAGCAG...TGCCCCAGACTCTGTGTGGCCACAGTCCTCTCCAGTGGTAGAAAATGTTAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR TCA 90 bp | CCATCTGCCTGTGGTGAACTCTTCTGGTTGGGTTTAACCCTCCTGGGAGTCATCTGTGGGAACCGATGCTaGGGATGTGAATGGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PSACGELFWLGLTLLGVICGNRC*GCEWEL Trigger: CAGCTCCCATTCACATCCTCAGCATCGGTTCCCACA...GATGACTCCCAGGAGGGTTAAACCCAACCAGAAGAGTTCACCACAGGCAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR CCA 90 bp | TACCCAAGTCCAACTCCTGATACACAGAGGGCCACCTTGGATTGCTATGCTGGCTCCATGCTGCTGCAGTaGTGTTGGGGAGTGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: YPSPTPDTQRATLDCYAGSMLLQ*CWGVQH Trigger: ATGCTGCACTCCCCAACACCACTGCAGCAGCATGGA...GCCAGCATAGCAATCCAAGGTGGCCCTCTGTGTATCAGGAGTTGGACTTGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR CCA 90 bp | CCATCTGCCTGTGGTGAACTCTTCTGGTTGGGTTTAACCCTCCTGGGAGTCATCCCTCGGACAGTGGCCTaGAAGCCACTGGTGATGAAA | + |
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Preference number: 4 (lower is better) Translates to: PSACGELFWLGLTLLGVIPRTVA*KPLVMK Trigger: TTTCATCACCAGTGGCTTCCAGGCCACTGTCCGAGG...GATGACTCCCAGGAGGGTTAAACCCAACCAGAAGAGTTCACCACAGGCAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR TCA 90 bp | GAAATCAACTTGCTGTCCAGGACCATGATGTGGTTGCCTGGTAACCTCCTAGAGGATGGTATAGGTGACTaGAGGGGTCTTGGCCCGCGT | + |
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Preference number: 4 (lower is better) Translates to: EINLLSRTMMWLPGNLLEDGIGD*RGLGPR Trigger: ACGCGGGCCAAGACCCCTTCAGTCACCTATACCATC...CTCTAGGAGGTTACCAGGCAACCACATCATGGTCCTGGACAGCAAGTTGATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR TCA 90 bp | GAAATCAACTTGCTGTCCAGGACCATGATGTGGTTGCCTGGTAACCTCCTAGAGCCGATGCTGAGGATGTaGATGGGAGCTGAGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: EINLLSRTMMWLPGNLLEPMLRM*MGAEAL Trigger: CAAGGCCTCAGCTCCCATTCACATCCTCAGCATCGG...CTCTAGGAGGTTACCAGGCAACCACATCATGGTCCTGGACAGCAAGTTGATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR GCA 90 bp | GTTTCTCCATCTGCCTGTGGTGAACTCTTCTGGTTGGGTTTAACCCTCCTGGGATCCATTGGTCCATGCTaGTGCAGTGGTGTTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: VSPSACGELFWLGLTLLGSIGPC*CSGVGE Trigger: CTCCCCAACACCACTGCAGCAGCATGGACCAATGGA...TCCCAGGAGGGTTAAACCCAACCAGAAGAGTTCACCACAGGCAGATGGAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR GCA 90 bp | ACATTTTCTACCACTGGAGAGGACTGTGGCCACACAGAGTCTGGGGCAGTGGTTGCAGAAGACATACAGTaGCAGTCCGTTGAGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: TFSTTGEDCGHTESGAVVAEDIQ*QSVEHQ Trigger: CTGGTGCTCAACGGACTGGCACTGTATGTCTTCTGC...AACCACTGCCCCAGACTCTGTGTGGCCACAGTCCTCTCCAGTGGTAGAAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR CCA 90 bp | GAAATCAACTTGCTGTCCAGGACCATGATGTGGTTGCCTGGTAACCTCCTAGAGAGACAGCAAAGCGTGTaGGCAGGGACAGGCCCACTA | + |
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Preference number: 4 (lower is better) Translates to: EINLLSRTMMWLPGNLLERQQSV*AGTGPL Trigger: TAGTGGGCCTGTCCCTGCCCACACGCTTTGCTGTCT...CTCTAGGAGGTTACCAGGCAACCACATCATGGTCCTGGACAGCAAGTTGATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR CAA 72 bp | TACCCAAGTCCAACTCCTGATACACAGAGGGCCACCTaGGATTGCTATGCTGGCCTGTGGTGTAGTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: YPSPTPDTQRAT*DCYAGLWCSSQ Trigger: CTGTGAACTACACCACAGGCCAGCATAGCAATCCAAGGTGGCCCTCTGTGTATCAGGAGTTGGACTTGGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR GCA 90 bp | GAAATCAACTTGCTGTCCAGGACCATGATGTGGTTGCCTGGTAACCTCCTAGAGATTGGTCCATGCTGCTaGAGTGGTGTTGGGGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: EINLLSRTMMWLPGNLLEIGPCC*SGVGEC Trigger: GCACTCCCCAACACCACTGCAGCAGCATGGACCAAT...CTCTAGGAGGTTACCAGGCAACCACATCATGGTCCTGGACAGCAAGTTGATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR GCA 90 bp | CCTAACACTATTGCCCCCAAAACATTGACCTTCTCCTCTTGTTTCTCCATCTGCCTGGGGAAGGTGGCTTaGAGTTCCTCATCCAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: PNTIAPKTLTFSSCFSICLGKVA*SSSSSR Trigger: CCGGCTGGATGAGGAACTGCAAGCCACCTTCCCCAG...GCAGATGGAGAAACAAGAGGAGAAGGTCAATGTTTTGGGGGCAATAGTGTTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR TCA 90 bp | GTTGGGTTTAACCCTCCTGGGAGTCATCAGAAAGTTGATCTTTGTGCTTTCTCTTCCAGCCGGGCAAAGTaGTGGAACAGGGGCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: VGFNPPGSHQKVDLCAFSSSRAK*WNRGIS Trigger: GGAGATGCCCCTGTTCCATCACTTTGCCCGGCTGGA...AGAGAAAGCACAAAGATCAACTTTCTGATGACTCCCAGGAGGGTTAAACCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR TCA 90 bp | GTTTCTCCATCTGCCTGTGGTGAACTCTTCTGGTTGGGTTTAACCCTCCTGGGATGGAACAGTGCATGTTaGGGAAGTAGCCCAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: VSPSACGELFWLGLTLLGWNSAC*GSSPGH Trigger: ATGTCCTGGGCTACTTCCTCAACATGCACTGTTCCA...TCCCAGGAGGGTTAAACCCAACCAGAAGAGTTCACCACAGGCAGATGGAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR GCA 90 bp | CCTAACACTATTGCCCCCAAAACATTGACCTTCTCCTCTTGTTTCTCCATCTGCGGGTCTTGGCCCGCGTaGGACAGCAGAAGACATACA | + |
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Preference number: 4 (lower is better) Translates to: PNTIAPKTLTFSSCFSICGSWPA*DSRRHT Trigger: TGTATGTCTTCTGCTGTCGCACGCGGGCCAAGACCC...GCAGATGGAGAAACAAGAGGAGAAGGTCAATGTTTTGGGGGCAATAGTGTTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR GCA 90 bp | TGGTTGGGTTTAACCCTCCTGGGAGTCATCAGAAAGTTGATCTTTGTGCTTTCTCCAGCCACACAAAGATaGACACGGCCTTGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: WLGLTLLGVIRKLIFVLSPATQR*TRPWRR Trigger: CCTGCGCCAAGGCCGTGTGCATCTTTGTGTGGCTGG...AGAAAGCACAAAGATCAACTTTCTGATGACTCCCAGGAGGGTTAAACCCAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR CCA 90 bp | GTTGGGTTTAACCCTCCTGGGAGTCATCAGAAAGTTGATCTTTGTGCTTTCTCTGTGCTTGCCACAGGCTaGGGAAGGTGGCTTGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: VGFNPPGSHQKVDLCAFSVLATG*GRWLAV Trigger: AACTGCAAGCCACCTTCCCCAGCCTGTGGCAAGCAC...AGAGAAAGCACAAAGATCAACTTTCTGATGACTCCCAGGAGGGTTAAACCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| 3UTR CAA 72 bp | CTTGTTTCTCCATCTGCCTGTGGTGAACTCTTCTGGTaGGGTTTAACCCTCCTGGGAGTCATCAGAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: LVSPSACGELFW*GLTLLGVIRKL Trigger: CAACTTTCTGATGACTCCCAGGAGGGTTAAACCCAACCAGAAGAGTTCACCACAGGCAGATGGAGAAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR GCA 90 bp | ATCTTTGTGCTTTCTCTGGAAGAGTTTCTTCAGGGAACAAATTCACAGAGGCTAAGTGGTGTTGGGGAGTaGAGCATCCCAGGGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: IFVLSLEEFLQGTNSQRLSGVGE*SIPGPH Trigger: ATGAGGCCCTGGGATGCTGCACTCCCCAACACCACT...TAGCCTCTGTGAATTTGTTCCCTGAAGAAACTCTTCCAGAGAAAGCACAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS CCA 90 bp | GGGTCACGACTCCTGCTGCCAGCCACACAAAGATGCACACGGCCTTaGCGCAGGCCGGCTGGCGCCAGCGGCGGGAACCCTCGGGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: GSRLLLPATQRCTRP*RRPAGASGGNPRVA Trigger: TGCAACCCGAGGGTTCCCGCCGCTGGCGCCAGCCGGCCTGCGCCAAGGCCGTGTGCATCTTTGTGTGGCTGGCAGCAGGAGTCGTGACCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS TCA 90 bp | ATGACCAGCACCGTGAGCAGCAGCTGCATGGCCCTCACGCGCCGCTaGCGGCCCTGGCGTAGCAGACCCGGCCTCGACAGCGCACACATG | + |
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Preference number: 5 (lower is better) Translates to: MTSTVSSSCMALTRR*RPWRSRPGLDSAHM Trigger: CATGTGTGCGCTGTCGAGGCCGGGTCTGCTACGCCAGGGCCGTCAGCGGCGCGTGAGGGCCATGCAGCTGCTGCTCACGGTGCTGGTCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS GCA 90 bp | CCAGCACAGACAGGGTCACGACTCCTGCTGCCAGCCACACAAAGATaGACACGGCCTTGGCGCAGGCCGGCTGGCGCCAGCGGCGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: PAQTGSRLLLPATQR*TRPWRRPAGASGGN Trigger: GTTCCCGCCGCTGGCGCCAGCCGGCCTGCGCCAAGGCCGTGTGCATCTTTGTGTGGCTGGCAGCAGGAGTCGTGACCCTGTCTGTGCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS GCA 90 bp | TCGTCCACCCGACTTCACACCCAGCACAGACAGGGTCACGACTCCTaGTGCCAGCCACACAAAGATGCACACGGCCTTGGCGCAGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: SSTRLHTQHRQGHDS*CQPHKDAHGLGAGR Trigger: CCGGCCTGCGCCAAGGCCGTGTGCATCTTTGTGTGGCTGGCAGCAGGAGTCGTGACCCTGTCTGTGCTGGGTGTGAAGTCGGGTGGACGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS CCA 90 bp | GCCGGGCAAAGTGATGGAACAGGGGCATCTCCGGCACACTTCCATTaGTCCATGCTGCTGCAGTGGTGTTGGGGAGTGCAGCATCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: AGQSDGTGASPAHFH*SMLLQWCWGVQHPR Trigger: CCTGGGATGCTGCACTCCCCAACACCACTGCAGCAGCATGGACCAATGGAAGTGTGCCGGAGATGCCCCTGTTCCATCACTTTGCCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS TCA 90 bp | TCTTGGCCCGCGTGCGACAGCAGAAGACATACAGTGCCAGTCCGTTaGGCACCAGCCCGGCAAGGAAGATGGTGCCGTGCACGACCATTA | + |
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Preference number: 5 (lower is better) Translates to: SWPACDSRRHTVPVR*APARQGRWCRARPL Trigger: TAATGGTCGTGCACGGCACCATCTTCCTTGCCGGGCTGGTGCTCAACGGACTGGCACTGTATGTCTTCTGCTGTCGCACGCGGGCCAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS TCA 90 bp | AGGCAGCAGGAACTCCAGAACGGTCAGAGCAAAGACACGGCAGCATaGTCGTCCACCCGACTTCACACCCAGCACAGACAGGGTCACGAC | + |
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Preference number: 5 (lower is better) Translates to: RQQELQNGQSKDTAA*SSTRLHTQHRQGHD Trigger: GTCGTGACCCTGTCTGTGCTGGGTGTGAAGTCGGGTGGACGATCATGCTGCCGTGTCTTTGCTCTGACCGTTCTGGAGTTCCTGCTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS GCA 90 bp | GTGATGGAACAGGGGCATCTCCGGCACACTTCCATTGGTCCATGCTaGTGCAGTGGTGTTGGGGAGTGCAGCATCCCAGGGCCTCATAGA | + |
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Preference number: 5 (lower is better) Translates to: VMEQGHLRHTSIGPC*CSGVGECSIPGPHR Trigger: TCTATGAGGCCCTGGGATGCTGCACTCCCCAACACCACTGCAGCAGCATGGACCAATGGAAGTGTGCCGGAGATGCCCCTGTTCCATCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR CAA 90 bp | CAACTCCTGATACACAGAGGGCCACCTTGGATTGCTATGCTGGCCTGTGGTGTAGCGGGAACCCTCGGGTaGCACAATGGCCAGGTAGCG | + |
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Preference number: 5 (lower is better) Translates to: QLLIHRGPPWIAMLACGVAGTLG*HNGQVA Trigger: CGCTACCTGGCCATTGTGCAACCCGAGGGTTCCCGC...TACACCACAGGCCAGCATAGCAATCCAAGGTGGCCCTCTGTGTATCAGGAGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS GCA 90 bp | AAAGTGATGGAACAGGGGCATCTCCGGCACACTTCCATTGGTCCATaGTGCTGCAGTGGTGTTGGGGAGTGCAGCATCCCAGGGCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: KVMEQGHLRHTSIGP*CCSGVGECSIPGPH Trigger: ATGAGGCCCTGGGATGCTGCACTCCCCAACACCACTGCAGCAGCATGGACCAATGGAAGTGTGCCGGAGATGCCCCTGTTCCATCACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS CCA 90 bp | CAAGGAAGATGGTGCCGTGCACGACCATTAGTGCTTGCCACAGGCTaGGGAAGGTGGCTTGCAGTTCCTCATCCAGCCGGGCAAAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: QGRWCRARPLVLATG*GRWLAVPHPAGQSD Trigger: ATCACTTTGCCCGGCTGGATGAGGAACTGCAAGCCACCTTCCCCAGCCTGTGGCAAGCACTAATGGTCGTGCACGGCACCATCTTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR CAA 90 bp | ACATTTTCTACCACTGGAGAGGACTGTGGCCACACAGAGTCTGGGGCAGTGGTTGCTGCTGCAGTGGTGTaGGGGAGTGCAGCATCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TFSTTGEDCGHTESGAVVAAAVV*GSAASQ Trigger: CTGGGATGCTGCACTCCCCAACACCACTGCAGCAGC...AACCACTGCCCCAGACTCTGTGTGGCCACAGTCCTCTCCAGTGGTAGAAAATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR CAA 90 bp | CCATCTGCCTGTGGTGAACTCTTCTGGTTGGGTTTAACCCTCCTGGGAGTCATCTACAGTGCCAGTCCGTaGAGCACCAGCCCGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSACGELFWLGLTLLGVIYSASP*STSPAR Trigger: CCTTGCCGGGCTGGTGCTCAACGGACTGGCACTGTA...GATGACTCCCAGGAGGGTTAAACCCAACCAGAAGAGTTCACCACAGGCAGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS TCA 90 bp | CTGGGTAAGGGTGTGGGAACCGATGCTGAGGATGTGAATGGGAGCTaGGGCCTTGGTGCTCTTGTGCATGCTGACCACATCCATACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGKGVGTDAEDVNGS*GLGALVHADHIHTA Trigger: AGCAGTATGGATGTGGTCAGCATGCACAAGAGCACCAAGGCCTCAGCTCCCATTCACATCCTCAGCATCGGTTCCCACACCCTTACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS TCA 90 bp | TTGGTCAAAGGCTGGGTAAGGGTGTGGGAACCGATGCTGAGGATGTaGATGGGAGCTGAGGCCTTGGTGCTCTTGTGCATGCTGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: LVKGWVRVWEPMLRM*MGAEALVLLCMLTT Trigger: TGTGGTCAGCATGCACAAGAGCACCAAGGCCTCAGCTCCCATTCACATCCTCAGCATCGGTTCCCACACCCTTACCCAGCCTTTGACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR CAA 90 bp | CATTTTCTACCACTGGAGAGGACTGTGGCCACACAGAGTCTGGGGCAGTGGTTATCCGGCACACTTCCATaGGTCCATGCTGCTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HFLPLERTVATQSLGQWLSGTLP*VHAAAV Trigger: CACTGCAGCAGCATGGACCAATGGAAGTGTGCCGGA...TAACCACTGCCCCAGACTCTGTGTGGCCACAGTCCTCTCCAGTGGTAGAAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR CAA 90 bp | ACATTTTCTACCACTGGAGAGGACTGTGGCCACACAGAGTCTGGGGCAGTGGTTGAGGCCTTGGTGCTCTaGTGCATGCTGACCACATCC | + |
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Preference number: 5 (lower is better) Translates to: TFSTTGEDCGHTESGAVVEALVL*CMLTTS Trigger: GGATGTGGTCAGCATGCACAAGAGCACCAAGGCCTC...AACCACTGCCCCAGACTCTGTGTGGCCACAGTCCTCTCCAGTGGTAGAAAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS-3UTR CAA 90 bp | CCATCTGCCTGTGGTGAACTCTTCTGGTTGGGTTTAACCCTCCTGGGAGTCATCATGGGAGCTGAGGCCTaGGTGCTCTTGTGCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSACGELFWLGLTLLGVIMGAEA*VLLCML Trigger: CAGCATGCACAAGAGCACCAAGGCCTCAGCTCCCAT...GATGACTCCCAGGAGGGTTAAACCCAACCAGAAGAGTTCACCACAGGCAGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS TCA 72 bp | ACCGTGAGCAGCAGCTGCATGGCCCTCACGCGCCGCTaGCGGCCCTGGCGTAGCAGACCCGGCCTCGACAGC | + |
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Preference number: 6 (lower is better) Translates to: TVSSSCMALTRR*RPWRSRPGLDS Trigger: GCTGTCGAGGCCGGGTCTGCTACGCCAGGGCCGTCAGCGGCGCGTGAGGGCCATGCAGCTGCTGCTCACGGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS CAA 90 bp | AGGGTCACGACTCCTGCTGCCAGCCACACAAAGATGCACACGGCCTaGGCGCAGGCCGGCTGGCGCCAGCGGCGGGAACCCTCGGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: RVTTPAASHTKMHTA*AQAGWRQRREPSGC Trigger: GCAACCCGAGGGTTCCCGCCGCTGGCGCCAGCCGGCCTGCGCCAAGGCCGTGTGCATCTTTGTGTGGCTGGCAGCAGGAGTCGTGACCCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS GCA 72 bp | ACAGGGTCACGACTCCTGCTGCCAGCCACACAAAGATaGACACGGCCTTGGCGCAGGCCGGCTGGCGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TGSRLLLPATQR*TRPWRRPAGAS Trigger: GCTGGCGCCAGCCGGCCTGCGCCAAGGCCGTGTGCATCTTTGTGTGGCTGGCAGCAGGAGTCGTGACCCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS CCA 72 bp | CACACAAAGATGCACACGGCCTTGGCGCAGGCCGGCTaGCGCCAGCGGCGGGAACCCTCGGGTTGCACAATG | + |
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Preference number: 6 (lower is better) Translates to: HTKMHTALAQAG*RQRREPSGCTM Trigger: CATTGTGCAACCCGAGGGTTCCCGCCGCTGGCGCCAGCCGGCCTGCGCCAAGGCCGTGTGCATCTTTGTGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS GCA 72 bp | GGGCATCTCCGGCACACTTCCATTGGTCCATGCTGCTaGAGTGGTGTTGGGGAGTGCAGCATCCCAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GHLRHTSIGPCC*SGVGECSIPGP Trigger: AGGCCCTGGGATGCTGCACTCCCCAACACCACTGCAGCAGCATGGACCAATGGAAGTGTGCCGGAGATGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS GCA 72 bp | CAGGGGCATCTCCGGCACACTTCCATTGGTCCATGCTaGTGCAGTGGTGTTGGGGAGTGCAGCATCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: QGHLRHTSIGPC*CSGVGECSIPG Trigger: CCCTGGGATGCTGCACTCCCCAACACCACTGCAGCAGCATGGACCAATGGAAGTGTGCCGGAGATGCCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS GCA 72 bp | CCGTTGAGCACCAGCCCGGCAAGGAAGATGGTGCCGTaGACGACCATTAGTGCTTGCCACAGGCTGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PLSTSPARKMVP*TTISACHRLGK Trigger: CTTCCCCAGCCTGTGGCAAGCACTAATGGTCGTGCACGGCACCATCTTCCTTGCCGGGCTGGTGCTCAACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS CCA 72 bp | TGGTGCCGTGCACGACCATTAGTGCTTGCCACAGGCTaGGGAAGGTGGCTTGCAGTTCCTCATCCAGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: WCRARPLVLATG*GRWLAVPHPAG Trigger: CCCGGCTGGATGAGGAACTGCAAGCCACCTTCCCCAGCCTGTGGCAAGCACTAATGGTCGTGCACGGCACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS CCA 72 bp | GACAGCCTCGGGCACCGTAGAAGACAGCAAAGCGTGTaGGCAGGGACAGGCCCACTAGCAGGTCAGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: DSLGHRRRQQSV*AGTGPLAGQSP Trigger: TGGTGACTGACCTGCTAGTGGGCCTGTCCCTGCCCACACGCTTTGCTGTCTTCTACGGTGCCCGAGGCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS CAA 72 bp | CGCGTGCGACAGCAGAAGACATACAGTGCCAGTCCGTaGAGCACCAGCCCGGCAAGGAAGATGGTGCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: RVRQQKTYSASP*STSPARKMVPC Trigger: GCACGGCACCATCTTCCTTGCCGGGCTGGTGCTCAACGGACTGGCACTGTATGTCTTCTGCTGTCGCACGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS CAA 90 bp | GGCATCTCCGGCACACTTCCATTGGTCCATGCTGCTGCAGTGGTGTaGGGGAGTGCAGCATCCCAGGGCCTCATAGACAACGCAGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: GISGTLPLVHAAAVV*GSAASQGLIDNAEG Trigger: GCCCTCTGCGTTGTCTATGAGGCCCTGGGATGCTGCACTCCCCAACACCACTGCAGCAGCATGGACCAATGGAAGTGTGCCGGAGATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS CAA 90 bp | GTCTTGGCCCGCGTGCGACAGCAGAAGACATACAGTGCCAGTCCGTaGAGCACCAGCCCGGCAAGGAAGATGGTGCCGTGCACGACCATT | + |
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Preference number: 6 (lower is better) Translates to: VLARVRQQKTYSASP*STSPARKMVPCTTI Trigger: AATGGTCGTGCACGGCACCATCTTCCTTGCCGGGCTGGTGCTCAACGGACTGGCACTGTATGTCTTCTGCTGTCGCACGCGGGCCAAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS TCA 72 bp | GCGTGCGACAGCAGAAGACATACAGTGCCAGTCCGTTaGGCACCAGCCCGGCAAGGAAGATGGTGCCGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ACDSRRHTVPVR*APARQGRWCRA Trigger: TGCACGGCACCATCTTCCTTGCCGGGCTGGTGCTCAACGGACTGGCACTGTATGTCTTCTGCTGTCGCACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS GCA 72 bp | GGTCTTGGCCCGCGTGCGACAGCAGAAGACATACAGTaGCAGTCCGTTGAGCACCAGCCCGGCAAGGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: GLGPRATAEDIQ*QSVEHQPGKED Trigger: ATCTTCCTTGCCGGGCTGGTGCTCAACGGACTGGCACTGTATGTCTTCTGCTGTCGCACGCGGGCCAAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS GCA 72 bp | CGACTTCACACCCAGCACAGACAGGGTCACGACTCCTaGTGCCAGCCACACAAAGATGCACACGGCCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RLHTQHRQGHDS*CQPHKDAHGLG Trigger: GCCAAGGCCGTGTGCATCTTTGTGTGGCTGGCAGCAGGAGTCGTGACCCTGTCTGTGCTGGGTGTGAAGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS GCA 72 bp | GAACAGGGGCATCTCCGGCACACTTCCATTGGTCCATaGTGCTGCAGTGGTGTTGGGGAGTGCAGCATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EQGHLRHTSIGP*CCSGVGECSIP Trigger: TGGGATGCTGCACTCCCCAACACCACTGCAGCAGCATGGACCAATGGAAGTGTGCCGGAGATGCCCCTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS TCA 72 bp | CAGGTCAGTCACCACCAGGTTGATGGTATAGGTGACTaGAGGGGTCTTGGCCCGCGTGCGACAGCAGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: QVSHHQVDGIGD*RGLGPRATAED Trigger: GTCTTCTGCTGTCGCACGCGGGCCAAGACCCCTTCAGTCACCTATACCATCAACCTGGTGGTGACTGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS TCA 72 bp | GGCTGGGTAAGGGTGTGGGAACCGATGCTGAGGATGTaGATGGGAGCTGAGGCCTTGGTGCTCTTGTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: GWVRVWEPMLRM*MGAEALVLLCM Trigger: CATGCACAAGAGCACCAAGGCCTCAGCTCCCATTCACATCCTCAGCATCGGTTCCCACACCCTTACCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS CCA 72 bp | TGCTTAGGTACGTTAGGCCACAGTGCCACAGCCACCTaGCGGGCATGGAAGGGTGTGAAACAGACCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CLGTLGHSATAT*RAWKGVKQTRK Trigger: CTTCCTGGTCTGTTTCACACCCTTCCATGCCCGCCAGGTGGCTGTGGCACTGTGGCCTAACGTACCTAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS CAA 72 bp | GGCACACTTCCATTGGTCCATGCTGCTGCAGTGGTGTaGGGGAGTGCAGCATCCCAGGGCCTCATAGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: GTLPLVHAAAVV*GSAASQGLIDN Trigger: GTTGTCTATGAGGCCCTGGGATGCTGCACTCCCCAACACCACTGCAGCAGCATGGACCAATGGAAGTGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS TCA 72 bp | GAACTCCAGAACGGTCAGAGCAAAGACACGGCAGCATaGTCGTCCACCCGACTTCACACCCAGCACAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: ELQNGQSKDTAA*SSTRLHTQHRQ Trigger: CTGTCTGTGCTGGGTGTGAAGTCGGGTGGACGATCATGCTGCCGTGTCTTTGCTCTGACCGTTCTGGAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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| CDS TCA 72 bp | GGTGTGGGAACCGATGCTGAGGATGTGAATGGGAGCTaGGGCCTTGGTGCTCTTGTGCATGCTGACCACATC | + |
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Preference number: 6 (lower is better) Translates to: GVGTDAEDVNGS*GLGALVHADHI Trigger: GATGTGGTCAGCATGCACAAGAGCACCAAGGCCTCAGCTCCCATTCACATCCTCAGCATCGGTTCCCACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064166.5 |
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