Pregenerated sensors for GPR182 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058396Ensembl transcript IDs: ENSMUST00000079692.6
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGATGCCTGGGTGGAGGATCCATCCTGTTGAGCCAGCTGCCGGGTaGCTGCCCACGACCCAGCTTGCTGGCTGTAATCCCCACCCCCTT | + |
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Preference number: 1 (lower is better) Translates to: WMPGWRIHPVEPAAG*LPTTQLAGCNPHPL Trigger: AAGGGGGTGGGGATTACAGCCAGCAAGCTGGGTCGTGGGCAGGCACCCGGCAGCTGGCTCAACAGGATGGATCCTCCACCCAGGCATCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR GCA 90 bp | CCTGCTCCAGCTCGTTCCGGCTCGCTCCGGCTTGCTTCAGGAGCTTaGACCAGCCCAGCAGATGCCTGGACTCTTTCAGGCACCACACAG | + |
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Preference number: 1 (lower is better) Translates to: PAPARSGSLRLASGA*TSPADAWTLSGTTQ Trigger: CTGTGTGGTGCCTGAAAGAGTCCAGGCATCTGCTGGGCTGGTGCAAGCTCCTGAAGCAAGCCGGAGCGAGCCGGAACGAGCTGGAGCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR CCA 90 bp | TCGCTCCGGCTTGCTTCAGGAGCTTGCACCAGCCCAGCAGATGCCTaGACTCTTTCAGGCACCACACAGTTTTCCTGGGGCCGGGATTCC | + |
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Preference number: 1 (lower is better) Translates to: SLRLASGACTSPADA*TLSGTTQFSWGRDS Trigger: GGAATCCCGGCCCCAGGAAAACTGTGTGGTGCCTGAAAGAGTCCAGGCATCTGCTGGGCTGGTGCAAGCTCCTGAAGCAAGCCGGAGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR TCA 90 bp | GGAATCACTGGTGGCTGTGTCTCCCTAGGAGAGAAAGGTCATCTGTaGGGAGGCCCCTGCTTTGGGGGAGGAGGAGCAGGATGGATGGGG | + |
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Preference number: 1 (lower is better) Translates to: GITGGCVSLGEKGHL*GGPCFGGGGAGWMG Trigger: CCCCATCCATCCTGCTCCTCCTCCCCCAAAGCAGGGGCCTCCTCACAGATGACCTTTCTCTCCTAGGGAGACACAGCCACCAGTGATTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR GCA 90 bp | CTTCCGGCCAGGGTGATTTATGAAACAAGGGCAGCTAGTTCCCTCTaGAGAGCATCCCTTAGCCTCCCTGCCTTCCTCAACCCAGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LPARVIYETRAASSL*RASLSLPAFLNPAG Trigger: TCCAGCTGGGTTGAGGAAGGCAGGGAGGCTAAGGGATGCTCTGCAGAGGGAACTAGCTGCCCTTGTTTCATAAATCACCCTGGCCGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR TCA 90 bp | CTCTGCAGCCGTCTCAGCCCAGAGCTAGGAAGCAATGGTTCTTGCTaGCCACTTCATGGTGAAGTGGTGCATCTGAGTGGGAGGCAGATG | + |
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Preference number: 1 (lower is better) Translates to: LCSRLSPELGSNGSC*PLHGEVVHLSGRQM Trigger: CATCTGCCTCCCACTCAGATGCACCACTTCACCATGAAGTGGTCAGCAAGAACCATTGCTTCCTAGCTCTGGGCTGAGACGGCTGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR CCA 90 bp | CTTTGCCCTATTCTGGAGAGAGAAGGTGGGTGTGGGAATCACTGGTaGCTGTGTCTCCCTAGGAGAGAAAGGTCATCTGTGAGGAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: LCPILEREGGCGNHW*LCLPRRERSSVRRP Trigger: GGGCCTCCTCACAGATGACCTTTCTCTCCTAGGGAGACACAGCCACCAGTGATTCCCACACCCACCTTCTCTCTCCAGAATAGGGCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR GCA 90 bp | GCAGTAGCCCCCAGAGTGTTCTCAGAATGGATGTCCCCTGATCTTTaGCCTATTCTGGAGAGAGAAGGTGGGTGTGGGAATCACTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: AVAPRVFSEWMSPDL*PILEREGGCGNHWW Trigger: CCACCAGTGATTCCCACACCCACCTTCTCTCTCCAGAATAGGGCAAAGATCAGGGGACATCCATTCTGAGAACACTCTGGGGGCTACTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR GCA 90 bp | GAGGAAAGTACAGGGACACCCATTTACCAGAGCAGACTGTGGGTCTaGAGGTCCATTGCCCTCCAAATGGTTTCCAGAGGCCATGGACAC | + |
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Preference number: 1 (lower is better) Translates to: EESTGTPIYQSRLWV*RSIALQMVSRGHGH Trigger: GTGTCCATGGCCTCTGGAAACCATTTGGAGGGCAATGGACCTGCAGACCCACAGTCTGCTCTGGTAAATGGGTGTCCCTGTACTTTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR TCA 90 bp | CCTATCCCTTCCACGGGGGCACAGACCCTGAGGAGGTTCATTTGGTaGTGCATGGTCTCAGGCATGAGGCTTCTGAGATCACCTATGTAT | + |
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Preference number: 1 (lower is better) Translates to: PIPSTGAQTLRRFIW*CMVSGMRLLRSPMY Trigger: ATACATAGGTGATCTCAGAAGCCTCATGCCTGAGACCATGCATCACCAAATGAACCTCCTCAGGGTCTGTGCCCCCGTGGAAGGGATAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR CCA 90 bp | GATCTTTGCCCTATTCTGGAGAGAGAAGGTGGGTGTGGGAATCACTaGTGGCTGTGTCTCCCTAGGAGAGAAAGGTCATCTGTGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: DLCPILEREGGCGNH*WLCLPRRERSSVRR Trigger: CCTCCTCACAGATGACCTTTCTCTCCTAGGGAGACACAGCCACCAGTGATTCCCACACCCACCTTCTCTCTCCAGAATAGGGCAAAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR CCA 90 bp | CCAGAGTGTTCTCAGAATGGATGTCCCCTGATCTTTGCCCTATTCTaGAGAGAGAAGGTGGGTGTGGGAATCACTGGTGGCTGTGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: PECSQNGCPLIFALF*REKVGVGITGGCVS Trigger: GGAGACACAGCCACCAGTGATTCCCACACCCACCTTCTCTCTCCAGAATAGGGCAAAGATCAGGGGACATCCATTCTGAGAACACTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR TCA 90 bp | AGTACCTGCAGTAGCCCCCAGAGTGTTCTCAGAATGGATGTCCCCTaGTCTTTGCCCTATTCTGGAGAGAGAAGGTGGGTGTGGGAATCA | + |
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Preference number: 1 (lower is better) Translates to: STCSSPQSVLRMDVP*SLPYSGERRWVWES Trigger: TGATTCCCACACCCACCTTCTCTCTCCAGAATAGGGCAAAGATCAGGGGACATCCATTCTGAGAACACTCTGGGGGCTACTGCAGGTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR TCA 90 bp | CAGCCCAGAGCTAGGAAGCAATGGTTCTTGCTGACCACTTCATGGTaGAGTGGTGCATCTGAGTGGGAGGCAGATGTAGAGGGGAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: QPRARKQWFLLTTSW*SGASEWEADVEGKE Trigger: TTCTTTCCCCTCTACATCTGCCTCCCACTCAGATGCACCACTTCACCATGAAGTGGTCAGCAAGAACCATTGCTTCCTAGCTCTGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR CCA 90 bp | TTTACCAGAGCAGACTGTGGGTCTGCAGGTCCATTGCCCTCCAAATaGTTTCCAGAGGCCATGGACACAGAAGGCAGATGCTATAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: FTRADCGSAGPLPSK*FPEAMDTEGRCYSL Trigger: CAGACTATAGCATCTGCCTTCTGTGTCCATGGCCTCTGGAAACCATTTGGAGGGCAATGGACCTGCAGACCCACAGTCTGCTCTGGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR CCA 90 bp | AGATCAGAGGAAAGTACAGGGACACCCATTTACCAGAGCAGACTGTaGGTCTGCAGGTCCATTGCCCTCCAAATGGTTTCCAGAGGCCAT | + |
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Preference number: 1 (lower is better) Translates to: RSEESTGTPIYQSRL*VCRSIALQMVSRGH Trigger: ATGGCCTCTGGAAACCATTTGGAGGGCAATGGACCTGCAGACCCACAGTCTGCTCTGGTAAATGGGTGTCCCTGTACTTTCCTCTGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR TCA 90 bp | AATGGTTTCCAGAGGCCATGGACACAGAAGGCAGATGCTATAGTCTaGAGCTTTTGTGCATATGTCAGTCTGGTAAATGAACCTTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: NGFQRPWTQKADAIV*SFCAYVSLVNEPLP Trigger: TGGCAAAGGTTCATTTACCAGACTGACATATGCACAAAAGCTTCAGACTATAGCATCTGCCTTCTGTGTCCATGGCCTCTGGAAACCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR TCA 90 bp | CCAACTGGTGAACTTGAGGTTCTCAGAATAGAAGATGGAAGCCATTaGGGAAGACATCTGCCATTGGTCTTTAGGTTTGGTCTACAGTCA | + |
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Preference number: 1 (lower is better) Translates to: PTGELEVLRIEDGSH*GRHLPLVFRFGLQS Trigger: TGACTGTAGACCAAACCTAAAGACCAATGGCAGATGTCTTCCTCAATGGCTTCCATCTTCTATTCTGAGAACCTCAAGTTCACCAGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR CAA 90 bp | TCCATCCTGTTGAGCCAGCTGCCGGGTGCCTGCCCACGACCCAGCTaGCTGGCTGTAATCCCCACCCCCTTGATTTATCAAACTCCCGGG | + |
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Preference number: 2 (lower is better) Translates to: SILLSQLPGACPRPS*LAVIPTPLIYQTPG Trigger: CCCGGGAGTTTGATAAATCAAGGGGGTGGGGATTACAGCCAGCAAGCTGGGTCGTGGGCAGGCACCCGGCAGCTGGCTCAACAGGATGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR GCA 90 bp | GCTGACTTGCTCCAGCTTGCTCTGGCCTGCTCCGGCCTGCTCCAGCTCGTTCCGGACACAGAAGGCAGATaGTATAGTCTGAAGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: ADLLQLALACSGLLQLVPDTEGR*YSLKLL Trigger: CAAAAGCTTCAGACTATAGCATCTGCCTTCTGTGTC...CGGAACGAGCTGGAGCAGGCCGGAGCAGGCCAGAGCAAGCTGGAGCAAGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCACTGAGTGGCAGTCTAGGACTCAAGACCCTCTTAGCTTAGCCATTGAGGGCCTCCTGGGTCCTTaGCCTCTGGCCTCTTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: CATEWQSRTQDPLSLAIEGLLGP*PLASCP Trigger: AGGACAAGAGGCCAGAGGCCAAGGACCCAGGAGGCC...CTCAATGGCTAAGCTAAGAGGGTCTTGAGTCCTAGACTGCCACTCAGTGGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR CAA 90 bp | TCTGCCTATCCCTTCCACGGGGGCACAGACCCTGAGGAGGTTCATTaGGTGATGCATGGTCTCAGGCATGAGGCTTCTGAGATCACCTAT | + |
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Preference number: 2 (lower is better) Translates to: SAYPFHGGTDPEEVH*VMHGLRHEASEITY Trigger: ATAGGTGATCTCAGAAGCCTCATGCCTGAGACCATGCATCACCAAATGAACCTCCTCAGGGTCTGTGCCCCCGTGGAAGGGATAGGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR TCA 90 bp | ACACAAAACCATTCTCGGCGTACTGCTGGTAGGAGAACCAGGAAGACAGAGATCGAGAAAGGTCATCTGTaGGGAGGCCCCTGCTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: TQNHSRRTAGRRTRKTEIEKGHL*GGPCFG Trigger: CCCAAAGCAGGGGCCTCCTCACAGATGACCTTTCTC...GATCTCTGTCTTCCTGGTTCTCCTACCAGCAGTACGCCGAGAATGGTTTTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR TCA 90 bp | CATTGCCCTCCAAATGGTTTCCAGAGGCCATGGACACAGAAGGCAGATGCTATACTGGAAATCAGCCTTTaGCCTCCCCTCTCCCTGCGT | + |
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Preference number: 2 (lower is better) Translates to: HCPPNGFQRPWTQKADAILEISL*PPLSLR Trigger: ACGCAGGGAGAGGGGAGGTCAAAGGCTGATTTCCAG...TATAGCATCTGCCTTCTGTGTCCATGGCCTCTGGAAACCATTTGGAGGGCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR GCA 90 bp | CATTGCCCTCCAAATGGTTTCCAGAGGCCATGGACACAGAAGGCAGATGCTATAGCCACATTTCCTGGATaGCTGGGTGGAGGATCCATC | + |
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Preference number: 2 (lower is better) Translates to: HCPPNGFQRPWTQKADAIATFPG*LGGGSI Trigger: GATGGATCCTCCACCCAGGCATCCAGGAAATGTGGC...TATAGCATCTGCCTTCTGTGTCCATGGCCTCTGGAAACCATTTGGAGGGCAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR CCA 90 bp | AAAACCATTCTCGGCGTACTGCTGGTAGGAGAACCAGGAAGACAGAGATCAGAGTCCTGGATGCCTGGGTaGAGGATCCATCCTGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: KTILGVLLVGEPGRQRSESWMPG*RIHPVE Trigger: CTCAACAGGATGGATCCTCCACCCAGGCATCCAGGA...CTCTGATCTCTGTCTTCCTGGTTCTCCTACCAGCAGTACGCCGAGAATGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR CCA 90 bp | GTTAAATTTCTACTGTACCTTCAGCAGCAAGTAAGACTTCTGGGTCAGCAAGCCAGGAGGCCCCTGCTTTaGGGGAGGAGGAGCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: VKFLLYLQQQVRLLGQQARRPLL*GRRSRM Trigger: CATCCTGCTCCTCCTCCCCCAAAGCAGGGGCCTCCT...GGCTTGCTGACCCAGAAGTCTTACTTGCTGCTGAAGGTACAGTAGAAATTTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR CCA 90 bp | GAACTCACTATAGTGTTCTGGAAATCAGCCTTTGACCTCCCCTCTCCCTGCGTGTGTGGGAATCACTGGTaGCTGTGTCTCCCTAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: ELTIVFWKSAFDLPSPCVCGNHW*LCLPRR Trigger: TCTCCTAGGGAGACACAGCCACCAGTGATTCCCACA...CACGCAGGGAGAGGGGAGGTCAAAGGCTGATTTCCAGAACACTATAGTGAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR CCA 90 bp | CATTGCCCTCCAAATGGTTTCCAGAGGCCATGGACACAGAAGGCAGATGCTATATCTGGAGAGAGAAGGTaGGTGTGGGAATCACTGGTG | + |
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Preference number: 2 (lower is better) Translates to: HCPPNGFQRPWTQKADAISGERR*VWESLV Trigger: CACCAGTGATTCCCACACCCACCTTCTCTCTCCAGA...TATAGCATCTGCCTTCTGTGTCCATGGCCTCTGGAAACCATTTGGAGGGCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR CCA 90 bp | AAAACCATTCTCGGCGTACTGCTGGTAGGAGAACCAGGAAGACAGAGATCAGAGCCATTGCCCTCCAAATaGTTTCCAGAGGCCATGGAC | + |
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Preference number: 2 (lower is better) Translates to: KTILGVLLVGEPGRQRSEPLPSK*FPEAMD Trigger: GTCCATGGCCTCTGGAAACCATTTGGAGGGCAATGG...CTCTGATCTCTGTCTTCCTGGTTCTCCTACCAGCAGTACGCCGAGAATGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR TCA 90 bp | GGAAGACATCTGCCATTGGTCTTTAGGTTTGGTCTACAGTCACACACACACACACCCTTCCGGCCAGGGTaGTTTATGAAACAAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GRHLPLVFRFGLQSHTHTPFRPG*FMKQGQ Trigger: CTGCCCTTGTTTCATAAATCACCCTGGCCGGAAGGG...TGTGTGTGTGTGTGACTGTAGACCAAACCTAAAGACCAATGGCAGATGTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR TCA 90 bp | AAAACCATTCTCGGCGTACTGCTGGTAGGAGAACCAGGAAGACAGAGATCAGAGAGAATGGATGTCCCCTaGTCTTTGCCCTATTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: KTILGVLLVGEPGRQRSERMDVP*SLPYSG Trigger: TCCAGAATAGGGCAAAGATCAGGGGACATCCATTCT...CTCTGATCTCTGTCTTCCTGGTTCTCCTACCAGCAGTACGCCGAGAATGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR GCA 90 bp | GAACTCACTATAGTGTTCTGGAAATCAGCCTTTGACCTCCCCTCTCCCTGCGTGATGTCCCCTGATCTTTaGCCTATTCTGGAGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: ELTIVFWKSAFDLPSPCVMSPDL*PILERE Trigger: TTCTCTCTCCAGAATAGGGCAAAGATCAGGGGACAT...CACGCAGGGAGAGGGGAGGTCAAAGGCTGATTTCCAGAACACTATAGTGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACATCTGCCATTGGTCTTTAGGTTTGGTCTACAGTCACACACACACACAATCTTTGCCCTATTCTaGAGAGAGAAGGTGGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GRHLPLVFRFGLQSHTHTIFALF*REKVGV Trigger: CACACCCACCTTCTCTCTCCAGAATAGGGCAAAGAT...TGTGTGTGTGTGTGACTGTAGACCAAACCTAAAGACCAATGGCAGATGTCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR CCA 90 bp | ACACAAAACCATTCTCGGCGTACTGCTGGTAGGAGAACCAGGAAGACAGAGATCCTCACTATAGTGTTCTaGAAATCAGCCTTTGACCTC | + |
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Preference number: 2 (lower is better) Translates to: TQNHSRRTAGRRTRKTEILTIVF*KSAFDL Trigger: GAGGTCAAAGGCTGATTTCCAGAACACTATAGTGAG...GATCTCTGTCTTCCTGGTTCTCCTACCAGCAGTACGCCGAGAATGGTTTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR TCA 90 bp | GTTAAATTTCTACTGTACCTTCAGCAGCAAGTAAGACTTCTGGGTCAGCAAGCCGAAGATGGAAGCCATTaGGGAAGACATCTGCCATTG | + |
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Preference number: 2 (lower is better) Translates to: VKFLLYLQQQVRLLGQQAEDGSH*GRHLPL Trigger: CAATGGCAGATGTCTTCCTCAATGGCTTCCATCTTC...GGCTTGCTGACCCAGAAGTCTTACTTGCTGCTGAAGGTACAGTAGAAATTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR CCA 90 bp | CAAATAGTGTACTATCAAGGAAAGATCCATTCTCTGTCCTTCCCGAACCGTTTCGAACTTTCTTGTTGGTaGAGGAAGCTAGAGTCTACC | + |
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Preference number: 2 (lower is better) Translates to: QIVYYQGKIHSLSFPNRFELSCW*RKLEST Trigger: GGTAGACTCTAGCTTCCTCCACCAACAAGAAAGTTC...GAAACGGTTCGGGAAGGACAGAGAATGGATCTTTCCTTGATAGTACACTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR TCA 90 bp | AGTACACACTTCTCAGAGATTCCCAGCACGGGTGTCTCTATGATTTATTTATTTTACTTAAATTGGCCCTaGACAAGCCAGTCCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: STHFSEIPSTGVSMIYLFYLNWP*TSQSFP Trigger: TGGGAAGGACTGGCTTGTTCAGGGCCAATTTAAGTA...AAATAAATAAATCATAGAGACACCCGTGCTGGGAATCTCTGAGAAGTGTGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR CAA 90 bp | TGGGGACGAGCGAAGAAGGTCTTTTTAGTGCAATTTCTGCATTATTaGGTTAAATTTCTACTGTACCTTCAGCAGCAAGTAAGACTTCTG | + |
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Preference number: 2 (lower is better) Translates to: WGRAKKVFLVQFLHY*VKFLLYLQQQVRLL Trigger: CAGAAGTCTTACTTGCTGCTGAAGGTACAGTAGAAATTTAACCAAATAATGCAGAAATTGCACTAAAAAGACCTTCTTCGCTCGTCCCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR-3UTR CCA 90 bp | AGTACACACTTCTCAGAGATTCCCAGCACGGGTGTCTCTATGATTTATTTATTTTCTGAACTTTCTTGTTaGTGGAGGAAGCTAGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: STHFSEIPSTGVSMIYLFSELSC*WRKLES Trigger: AGACTCTAGCTTCCTCCACCAACAAGAAAGTTCAGA...AAATAAATAAATCATAGAGACACCCGTGCTGGGAATCTCTGAGAAGTGTGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR GCA 72 bp | CTGACTTGCTCCAGCTTGCTCTGGCCTGCTCCGGCCTaGTCCAGCTCGTTCCGGCTCGCTCCGGCTTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: LTCSSLLWPAPA*SSSFRLAPACF Trigger: GAAGCAAGCCGGAGCGAGCCGGAACGAGCTGGAGCAGGCCGGAGCAGGCCAGAGCAAGCTGGAGCAAGTCAG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR GCA 72 bp | GGGTGGAGGATCCATCCTGTTGAGCCAGCTGCCGGGTaGCTGCCCACGACCCAGCTTGCTGGCTGTAATCCC | + |
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Preference number: 3 (lower is better) Translates to: GWRIHPVEPAAG*LPTTQLAGCNP Trigger: GGGATTACAGCCAGCAAGCTGGGTCGTGGGCAGGCACCCGGCAGCTGGCTCAACAGGATGGATCCTCCACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR TCA 72 bp | CATTTCCTGGATGCCTGGGTGGAGGATCCATCCTGTTaGGCCAGCTGCCGGGTGCCTGCCCACGACCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: HFLDAWVEDPSC*ASCRVPAHDPA Trigger: AGCTGGGTCGTGGGCAGGCACCCGGCAGCTGGCTCAACAGGATGGATCCTCCACCCAGGCATCCAGGAAATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR GCA 72 bp | GTGTTCTGGAAATCAGCCTTTGACCTCCCCTCTCCCTaGGTGGGAGGTAGAGTACCTGCAGTAGCCCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: VFWKSAFDLPSP*VGGRVPAVAPR Trigger: TCTGGGGGCTACTGCAGGTACTCTACCTCCCACGCAGGGAGAGGGGAGGTCAAAGGCTGATTTCCAGAACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR GCA 72 bp | CCGGCTTGCTTCAGGAGCTTGCACCAGCCCAGCAGATaGCTGGACTCTTTCAGGCACCACACAGTTTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: PACFRSLHQPSR*LDSFRHHTVFL Trigger: CAGGAAAACTGTGTGGTGCCTGAAAGAGTCCAGGCATCTGCTGGGCTGGTGCAAGCTCCTGAAGCAAGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR CCA 72 bp | GATGCCTGGACTCTTTCAGGCACCACACAGTTTTCCTaGGGCCGGGATTCCCCAGGACAGGCTTTGCTGACT | + |
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Preference number: 3 (lower is better) Translates to: DAWTLSGTTQFS*GRDSPGQALLT Trigger: AGTCAGCAAAGCCTGTCCTGGGGAATCCCGGCCCCAGGAAAACTGTGTGGTGCCTGAAAGAGTCCAGGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| 3UTR CCA 72 bp | CTTGCTTCAGGAGCTTGCACCAGCCCAGCAGATGCCTaGACTCTTTCAGGCACCACACAGTTTTCCTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LASGACTSPADA*TLSGTTQFSWG Trigger: GCCCCAGGAAAACTGTGTGGTGCCTGAAAGAGTCCAGGCATCTGCTGGGCTGGTGCAAGCTCCTGAAGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR TCA 72 bp | TCCCACCCCCTCCCACAGACCTCTCGCATCCCCCTCTaGACTTTCTTGTTGGTGGAGGAAGCTAGAGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SHPLPQTSRIPL*TFLLVEEARVY Trigger: GTAGACTCTAGCTTCCTCCACCAACAAGAAAGTTCAGAGGGGGATGCGAGAGGTCTGTGGGAGGGGGTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR TCA 72 bp | TCCACGGGGGCACAGACCCTGAGGAGGTTCATTTGGTaGTGCATGGTCTCAGGCATGAGGCTTCTGAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: STGAQTLRRFIW*CMVSGMRLLRS Trigger: TGATCTCAGAAGCCTCATGCCTGAGACCATGCATCACCAAATGAACCTCCTCAGGGTCTGTGCCCCCGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR TCA 72 bp | TGTATCTGCCTATCCCTTCCACGGGGGCACAGACCCTaGGGAGGTTCATTTGGTGATGCATGGTCTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CICLSLPRGHRP*GGSFGDAWSQA Trigger: TGCCTGAGACCATGCATCACCAAATGAACCTCCTCAGGGTCTGTGCCCCCGTGGAAGGGATAGGCAGATACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR GCA 72 bp | ACAGGGACACCCATTTACCAGAGCAGACTGTGGGTCTaGAGGTCCATTGCCCTCCAAATGGTTTCCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TGTPIYQSRLWV*RSIALQMVSRG Trigger: GCCTCTGGAAACCATTTGGAGGGCAATGGACCTGCAGACCCACAGTCTGCTCTGGTAAATGGGTGTCCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR TCA 72 bp | CGTCTCAGCCCAGAGCTAGGAAGCAATGGTTCTTGCTaGCCACTTCATGGTGAAGTGGTGCATCTGAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RLSPELGSNGSC*PLHGEVVHLSG Trigger: CCCACTCAGATGCACCACTTCACCATGAAGTGGTCAGCAAGAACCATTGCTTCCTAGCTCTGGGCTGAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR GCA 72 bp | AGGATACCACAGGGAAATAGAGCCACATTTCCTGGATaGCTGGGTGGAGGATCCATCCTGTTGAGCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RIPQGNRATFPG*LGGGSILLSQL Trigger: CAGCTGGCTCAACAGGATGGATCCTCCACCCAGGCATCCAGGAAATGTGGCTCTATTTCCCTGTGGTATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR CCA 72 bp | CTTCTGGGTCAGCAAGCCTTTAGCTGTGCCACTGAGTaGCAGTCTAGGACTCAAGACCCTCTTAGCTTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLGQQAFSCATE*QSRTQDPLSLA Trigger: GGCTAAGCTAAGAGGGTCTTGAGTCCTAGACTGCCACTCAGTGGCACAGCTAAAGGCTTGCTGACCCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR-3UTR CAA 90 bp | AACTCCCGGGTTAGGGATGAGGCACAGCTAGGGAACGTCCTGCCGAGGCCTCCTTTTGATATACTTAAATaGGCCCTGAACAAGCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: NSRVRDEAQLGNVLPRPPFDILK*ALNKPV Trigger: GACTGGCTTGTTCAGGGCCAATTTAAGTATATCAAA...AGGAGGCCTCGGCAGGACGTTCCCTAGCTGTGCCTCATCCCTAACCCGGGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR TCA 72 bp | AGTAGCCCCCAGAGTGTTCTCAGAATGGATGTCCCCTaGTCTTTGCCCTATTCTGGAGAGAGAAGGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSPQSVLRMDVP*SLPYSGERRWV Trigger: CACCCACCTTCTCTCTCCAGAATAGGGCAAAGATCAGGGGACATCCATTCTGAGAACACTCTGGGGGCTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR CCA 72 bp | GAAAGTACAGGGACACCCATTTACCAGAGCAGACTGTaGGTCTGCAGGTCCATTGCCCTCCAAATGGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ESTGTPIYQSRL*VCRSIALQMVS Trigger: GGAAACCATTTGGAGGGCAATGGACCTGCAGACCCACAGTCTGCTCTGGTAAATGGGTGTCCCTGTACTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR-3UTR CAA 90 bp | GAACTCACTATAGTGTTCTGGAAATCAGCCTTTGACCTCCCCTCTCCCTGCGTGCACAAAGGGAAAGTTTaGCAAGGTTCCTGTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ELTIVFWKSAFDLPSPCVHKGKV*QGSCGA Trigger: AGCCCCACAGGAACCTTGCAAAACTTTCCCTTTGTG...CACGCAGGGAGAGGGGAGGTCAAAGGCTGATTTCCAGAACACTATAGTGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR TCA 72 bp | GCTAGGAAGCAATGGTTCTTGCTGACCACTTCATGGTaGAGTGGTGCATCTGAGTGGGAGGCAGATGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ARKQWFLLTTSW*SGASEWEADVE Trigger: CTCTACATCTGCCTCCCACTCAGATGCACCACTTCACCATGAAGTGGTCAGCAAGAACCATTGCTTCCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCCCTTCCGGCCAGGGTGATTTATGAAACAAGGGCAGCTAGTTCCCTCTGCCCCCACAGCAACATTTaGATATACTTAAATTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: FPLPARVIYETRAASSLCPHSNI*IYLNWP Trigger: GGGCCAATTTAAGTATATCAAAATGTTGCTGTGGGG...GCAGAGGGAACTAGCTGCCCTTGTTTCATAAATCACCCTGGCCGGAAGGGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGACATCTGCCATTGGTCTTTAGGTTTGGTCTACAGTCACACACACACACATTGGCCTCTGGCCTCTaGTCCTCACAACTTGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: GRHLPLVFRFGLQSHTHTLASGL*SSQLGI Trigger: TATTCCAAGTTGTGAGGACAAGAGGCCAGAGGCCAA...TGTGTGTGTGTGTGACTGTAGACCAAACCTAAAGACCAATGGCAGATGTCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR TCA 72 bp | AGACAAACTGCTGGGCAGGGGAGCTATGGAAAGGCTTaGCTAGAGAGAACTCACTATAGTGTTCTGGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: RQTAGQGSYGKA*LERTHYSVLEI Trigger: GATTTCCAGAACACTATAGTGAGTTCTCTCTAGTCAAGCCTTTCCATAGCTCCCCTGCCCAGCAGTTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR TCA 72 bp | CAGAGGCCATGGACACAGAAGGCAGATGCTATAGTCTaGAGCTTTTGTGCATATGTCAGTCTGGTAAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: QRPWTQKADAIV*SFCAYVSLVNE Trigger: TTCATTTACCAGACTGACATATGCACAAAAGCTTCAGACTATAGCATCTGCCTTCTGTGTCCATGGCCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR TCA 72 bp | GAGGTGGCTCTGACATTAAAGTGTCTGCCACACACATaGGTACCCATGGTGGCGATATTTATTTGTAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: EVALTLKCLPHT*VPMVAIFICNL Trigger: AAGGTTACAAATAAATATCGCCACCATGGGTACTCATGTGTGTGGCAGACACTTTAATGTCAGAGCCACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR GCA 72 bp | AAATGGTTTCCAGAGGCCATGGACACAGAAGGCAGATaGTATAGTCTGAAGCTTTTGTGCATATGTCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KWFPEAMDTEGR*YSLKLLCICQS Trigger: AGACTGACATATGCACAAAAGCTTCAGACTATAGCATCTGCCTTCTGTGTCCATGGCCTCTGGAAACCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR TCA 72 bp | GAACTTGAGGTTCTCAGAATAGAAGATGGAAGCCATTaGGGAAGACATCTGCCATTGGTCTTTAGGTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ELEVLRIEDGSH*GRHLPLVFRFG Trigger: ACCAAACCTAAAGACCAATGGCAGATGTCTTCCTCAATGGCTTCCATCTTCTATTCTGAGAACCTCAAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR CCA 90 bp | GCTGACTTGCTCCAGCTTGCTCTGGCCTGCTCCGGCCTGCTCCAGCTCGTTCCGCGTATTCGGTGCTGGTaGCGCTGCCAGGAGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ADLLQLALACSGLLQLVPRIRCW*RCQEGE Trigger: CTCTCCCTCCTGGCAGCGCCACCAGCACCGAATACG...CGGAACGAGCTGGAGCAGGCCGGAGCAGGCCAGAGCAAGCTGGAGCAAGTCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR CAA 72 bp | TTGAGCCAGCTGCCGGGTGCCTGCCCACGACCCAGCTaGCTGGCTGTAATCCCCACCCCCTTGATTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSQLPGACPRPS*LAVIPTPLIYQ Trigger: TTGATAAATCAAGGGGGTGGGGATTACAGCCAGCAAGCTGGGTCGTGGGCAGGCACCCGGCAGCTGGCTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR CAA 72 bp | TTCCTTTCCCACGGACCCTCAGTTCAGATAGCTGACTaGCTCCAGCTTGCTCTGGCCTGCTCCGGCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSHGPSVQIAD*LQLALACSGLL Trigger: GAGCAGGCCGGAGCAGGCCAGAGCAAGCTGGAGCAAGTCAGCTATCTGAACTGAGGGTCCGTGGGAAAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR TCA 90 bp | GCTGACTTGCTCCAGCTTGCTCTGGCCTGCTCCGGCCTGCTCCAGCTCGTTCCGGGTAGAAATAATGAATaGAGCGACAGGAGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ADLLQLALACSGLLQLVPGRNNE*SDRRSC Trigger: GCAGCTTCTCCTGTCGCTTCATTCATTATTTCTACC...CGGAACGAGCTGGAGCAGGCCGGAGCAGGCCAGAGCAAGCTGGAGCAAGTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR GCA 90 bp | GCTGACTTGCTCCAGCTTGCTCTGGCCTGCTCCGGCCTGCTCCAGCTCGTTCCGGTAATGATGATGGAGTaGTGGGTGGAAGAAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ADLLQLALACSGLLQLVPVMMME*WVEEEE Trigger: CTCTTCTTCTTCCACCCAGCACTCCATCATCATTAC...CGGAACGAGCTGGAGCAGGCCGGAGCAGGCCAGAGCAAGCTGGAGCAAGTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR CCA 90 bp | GTACCTGCAGTAGCCCCCAGAGTGTTCTCAGAATGGATGTCCCCTGATCTTTGCCTCCGTATTCGGTGCTaGTGGCGCTGCCAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPAVAPRVFSEWMSPDLCLRIRC*WRCQEG Trigger: TCCCTCCTGGCAGCGCCACCAGCACCGAATACGGAG...GCAAAGATCAGGGGACATCCATTCTGAGAACACTCTGGGGGCTACTGCAGGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR TCA 90 bp | ACACAAAACCATTCTCGGCGTACTGCTGGTAGGAGAACCAGGAAGACAGAGATCCATCCCCACCCGGCCTaGACGGCGGCAGTTGACACA | + |
|
Preference number: 4 (lower is better) Translates to: TQNHSRRTAGRRTRKTEIHPHPA*TAAVDT Trigger: TGTGTCAACTGCCGCCGTTCAGGCCGGGTGGGGATG...GATCTCTGTCTTCCTGGTTCTCCTACCAGCAGTACGCCGAGAATGGTTTTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR GCA 90 bp | GGAAGACATCTGCCATTGGTCTTTAGGTTTGGTCTACAGTCACACACACACACAGGCCGACAGGGCCACTaGCAGGGCCCAGGCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRHLPLVFRFGLQSHTHTGRQGH*QGPGAV Trigger: TACAGCGCCTGGGCCCTGGCAGTGGCCCTGTCGGCC...TGTGTGTGTGTGTGACTGTAGACCAAACCTAAAGACCAATGGCAGATGTCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| 3UTR CAA 72 bp | CCACGACCCAGCTTGCTGGCTGTAATCCCCACCCCCTaGATTTATCAAACTCCCGGGTTAGGGATGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRPSLLAVIPTP*IYQTPGLGMRH Trigger: GTGCCTCATCCCTAACCCGGGAGTTTGATAAATCAAGGGGGTGGGGATTACAGCCAGCAAGCTGGGTCGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR TCA 90 bp | GAACTCACTATAGTGTTCTGGAAATCAGCCTTTGACCTCCCCTCTCCCTGCGTGCAGGCAGAGACAGGATaGTGCCCAGGTCTGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ELTIVFWKSAFDLPSPCVQAETG*CPGLRW Trigger: CCATCGCAGACCTGGGCATCATCCTGTCTCTGCCTG...CACGCAGGGAGAGGGGAGGTCAAAGGCTGATTTCCAGAACACTATAGTGAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR GCA 90 bp | TTCTCAGAATGGATGTCCCCTGATCTTTGCCCTATTCTGGAGAGAGAAGGTGGGCTCTCCGTCTGCCTTTaGCTCCGAAGCCGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSEWMSPDLCPILEREGGLSVCL*LRSRQA Trigger: AGCCTGCCGGCTTCGGAGGCAAAGGCAGACGGAGAG...CCCACCTTCTCTCTCCAGAATAGGGCAAAGATCAGGGGACATCCATTCTGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR CCA 90 bp | CATTGCCCTCCAAATGGTTTCCAGAGGCCATGGACACAGAAGGCAGATGCTATAGTAGGAAGCCCAGGATaGTGGCCGACAGGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HCPPNGFQRPWTQKADAIVGSPG*WPTGPL Trigger: CAGTGGCCCTGTCGGCCACCATCCTGGGCTTCCTAC...TATAGCATCTGCCTTCTGTGTCCATGGCCTCTGGAAACCATTTGGAGGGCAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR CCA 90 bp | TTTCCCCTTCCGGCCAGGGTGATTTATGAAACAAGGGCAGCTAGTTCCCTCTGCCCCTGGCCTGCTCCTTaGGAAGGTAACGGACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FPLPARVIYETRAASSLCPWPAP*EGNGPQ Trigger: TTGTGGTCCGTTACCTTCCCAAGGAGCAGGCCAGGG...GCAGAGGGAACTAGCTGCCCTTGTTTCATAAATCACCCTGGCCGGAAGGGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR GCA 90 bp | ACACAAAACCATTCTCGGCGTACTGCTGGTAGGAGAACCAGGAAGACAGAGATCTCCAACAGCTGGATGTaGACCACCTCCGGCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQNHSRRTAGRRTRKTEISNSWM*TTSGSG Trigger: CCCACTGCCGGAGGTGGTGCACATCCAGCTGTTGGA...GATCTCTGTCTTCCTGGTTCTCCTACCAGCAGTACGCCGAGAATGGTTTTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR CCA 90 bp | GTACCTGCAGTAGCCCCCAGAGTGTTCTCAGAATGGATGTCCCCTGATCTTTGCTGTAGAGGATGGGGTTaGCCACACAGTGCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VPAVAPRVFSEWMSPDLCCRGWG*PHSAAW Trigger: CCATGCTGCACTGTGTGGCCAACCCCATCCTCTACA...GCAAAGATCAGGGGACATCCATTCTGAGAACACTCTGGGGGCTACTGCAGGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR GCA 90 bp | GTTAAATTTCTACTGTACCTTCAGCAGCAAGTAAGACTTCTGGGTCAGCAAGCCGGAGGCTCGACCACCTaGTGCCCTGGCCTGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKFLLYLQQQVRLLGQQAGGSTT*CPGLLL Trigger: AAGGAGCAGGCCAGGGCAGCAGGTGGTCGAGCCTCC...GGCTTGCTGACCCAGAAGTCTTACTTGCTGCTGAAGGTACAGTAGAAATTTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR CCA 90 bp | GAACTCACTATAGTGTTCTGGAAATCAGCCTTTGACCTCCCCTCTCCCTGCGTGCTAGGAAGAGGCACATaGGCTCGGAGCCATCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: ELTIVFWKSAFDLPSPCVLGRGT*ARSHPT Trigger: TGTTGGATGGCTCCGAGCCCATGTGCCTCTTCCTAG...CACGCAGGGAGAGGGGAGGTCAAAGGCTGATTTCCAGAACACTATAGTGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR CCA 90 bp | CAAATAGTGTACTATCAAGGAAAGATCCATTCTCTGTCCTTCCCGAACCGTTTCCGGATGGGGTGGGTGTaGAGATCCGCTGCAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QIVYYQGKIHSLSFPNRFRMGWV*RSAAAG Trigger: GCCCGCTGCAGCGGATCTCCACACCCACCCCATCCG...GAAACGGTTCGGGAAGGACAGAGAATGGATCTTTCCTTGATAGTACACTATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR GCA 90 bp | ACACAAAACCATTCTCGGCGTACTGCTGGTAGGAGAACCAGGAAGACAGAGATCAGCGACAGGAGAAGCTaGCCCAGAGCCAAGTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TQNHSRRTAGRRTRKTEISDRRS*PRAKCT Trigger: AGTACACTTGGCTCTGGGGCAGCTTCTCCTGTCGCT...GATCTCTGTCTTCCTGGTTCTCCTACCAGCAGTACGCCGAGAATGGTTTTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR GCA 90 bp | CTTGTCCTCACAACTTGGAATATCAACAGGCAGACAAACACAAAGGGAAAGTTTGGCTCGACCACCTGCTaGCCTGGCCTGCTCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLTTWNINRQTNTKGKFGSTTC*PGLLLG Trigger: CCCAAGGAGCAGGCCAGGGCAGCAGGTGGTCGAGCC...AAACTTTCCCTTTGTGTTTGTCTGCCTGTTGATATTCCAAGTTGTGAGGACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR CCA 90 bp | CAAATAGTGTACTATCAAGGAAAGATCCATTCTCTGTCCTTCCCGAACCGTTTCGGAAGCCCAGGATGGTaGCCGACAGGGCCACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QIVYYQGKIHSLSFPNRFGSPGW*PTGPLP Trigger: TGGCAGTGGCCCTGTCGGCCACCATCCTGGGCTTCC...GAAACGGTTCGGGAAGGACAGAGAATGGATCTTTCCTTGATAGTACACTATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR CCA 90 bp | GTACCTGCAGTAGCCCCCAGAGTGTTCTCAGAATGGATGTCCCCTGATCTTTGCGAAAGTTGTAGAGGATaGGGTTGGCCACACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPAVAPRVFSEWMSPDLCESCRG*GWPHSA Trigger: TGCACTGTGTGGCCAACCCCATCCTCTACAACTTTC...GCAAAGATCAGGGGACATCCATTCTGAGAACACTCTGGGGGCTACTGCAGGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR TCA 90 bp | AAAACCATTCTCGGCGTACTGCTGGTAGGAGAACCAGGAAGACAGAGATCAGAGCTGCGATGGCCATGTTaGGGATGTACAGGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTILGVLLVGEPGRQRSELRWPC*GCTGSA Trigger: TGCTGAACCTGTACATCCTCAACATGGCCATCGCAG...CTCTGATCTCTGTCTTCCTGGTTCTCCTACCAGCAGTACGCCGAGAATGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR TCA 90 bp | AAAACCATTCTCGGCGTACTGCTGGTAGGAGAACCAGGAAGACAGAGATCAGAGATTGCAGAGTGTAGGTaGGGTGTTTGGAGGCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTILGVLLVGEPGRQRSEIAECR*GVWRRR Trigger: TCTCCGCCTCCAAACACCTCACCTACACTCTGCAAT...CTCTGATCTCTGTCTTCCTGGTTCTCCTACCAGCAGTACGCCGAGAATGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR CCA 90 bp | GAACTCACTATAGTGTTCTGGAAATCAGCCTTTGACCTCCCCTCTCCCTGCGTGCAATCGGTAAAGGTCTaGTTGAAGAGGTGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELTIVFWKSAFDLPSPCVQSVKV*LKRWSS Trigger: GCTGCTCCACCTCTTCAACCAGACCTTTACCGATTG...CACGCAGGGAGAGGGGAGGTCAAAGGCTGATTTCCAGAACACTATAGTGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR TCA 90 bp | CATTGCCCTCCAAATGGTTTCCAGAGGCCATGGACACAGAAGGCAGATGCTATAAAGTGTACTCCAGCATaGCCTCCAGCATCCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: HCPPNGFQRPWTQKADAIKCTPA*PPASKQ Trigger: CTGTTTGGATGCTGGAGGTCATGCTGGAGTACACTT...TATAGCATCTGCCTTCTGTGTCCATGGCCTCTGGAAACCATTTGGAGGGCAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR CCA 90 bp | AGTACACACTTCTCAGAGATTCCCAGCACGGGTGTCTCTATGATTTATTTATTTTGTCCGGTTCCAAGGTaGAGACGGGCCTGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STHFSEIPSTGVSMIYLFCPVPR*RRAWGW Trigger: CCAGCCCCAGGCCCGTCTCCACCTTGGAACCGGACA...AAATAAATAAATCATAGAGACACCCGTGCTGGGAATCTCTGAGAAGTGTGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR CCA 90 bp | TGTGCCACTGAGTGGCAGTCTAGGACTCAAGACCCTCTTAGCTTAGCCATTGAGATGATGATGGAGTGCTaGGTGGAAGAAGAAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CATEWQSRTQDPLSLAIEMMMEC*VEEEEE Trigger: CTCCTCTTCTTCTTCCACCCAGCACTCCATCATCAT...CTCAATGGCTAAGCTAAGAGGGTCTTGAGTCCTAGACTGCCACTCAGTGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
||
| CDS-3UTR TCA 90 bp | CTTGTCCTCACAACTTGGAATATCAACAGGCAGACAAACACAAAGGGAAAGTTTCCCGGAAGCTCGGGCTaGGAAAGTTGTAGAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLTTWNINRQTNTKGKFPGSSG*ESCRGW Trigger: CCATCCTCTACAACTTTCTCAGCCCGAGCTTCCGGG...AAACTTTCCCTTTGTGTTTGTCTGCCTGTTGATATTCCAAGTTGTGAGGACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS-3UTR CCA 90 bp | GTTAAATTTCTACTGTACCTTCAGCAGCAAGTAAGACTTCTGGGTCAGCAAGCCGTCTGGTTGAAGAGGTaGAGCAGCTCTGTCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKFLLYLQQQVRLLGQQAVWLKR*SSSVQL Trigger: CAACTGGACAGAGCTGCTCCACCTCTTCAACCAGAC...GGCTTGCTGACCCAGAAGTCTTACTTGCTGCTGAAGGTACAGTAGAAATTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS-3UTR CCA 90 bp | CTTGTCCTCACAACTTGGAATATCAACAGGCAGACAAACACAAAGGGAAAGTTTACGTTTCGGATGGGGTaGGTGTGGAGATCCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVLTTWNINRQTNTKGKFTFRMG*VWRSAA Trigger: TGCAGCGGATCTCCACACCCACCCCATCCGAAACGT...AAACTTTCCCTTTGTGTTTGTCTGCCTGTTGATATTCCAAGTTGTGAGGACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS-3UTR GCA 90 bp | CAAATAGTGTACTATCAAGGAAAGATCCATTCTCTGTCCTTCCCGAACCGTTTCAAGATGTGGGTCCCGTaGAGAGTGAGCAGCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: QIVYYQGKIHSLSFPNRFKMWVP*RVSSSI Trigger: TATGCTGCTGCTCACTCTGCACGGGACCCACATCTT...GAAACGGTTCGGGAAGGACAGAGAATGGATCTTTCCTTGATAGTACACTATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS-3UTR CCA 90 bp | GTTAAATTTCTACTGTACCTTCAGCAGCAAGTAAGACTTCTGGGTCAGCAAGCCAGGGCAGCCAGCAGATaGCAAAGACAACTATGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKFLLYLQQQVRLLGQQARAASR*QRQLCK Trigger: CTTACATAGTTGTCTTTGCCATCTGCTGGCTGCCCT...GGCTTGCTGACCCAGAAGTCTTACTTGCTGCTGAAGGTACAGTAGAAATTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS-3UTR TCA 90 bp | CAAATAGTGTACTATCAAGGAAAGATCCATTCTCTGTCCTTCCCGAACCGTTTCTGCTGCTGTACATGTTaGCAAGGTAGAAATAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: QIVYYQGKIHSLSFPNRFCCCTC*QGRNNE Trigger: TTCATTATTTCTACCTTGTCAACATGTACAGCAGCA...GAAACGGTTCGGGAAGGACAGAGAATGGATCTTTCCTTGATAGTACACTATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS-3UTR CCA 90 bp | AGTACACACTTCTCAGAGATTCCCAGCACGGGTGTCTCTATGATTTATTTATTTAGCTCTGTCCAGTTGTaGATGTCTCTAAAATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: STHFSEIPSTGVSMIYLFSSVQL*MSLKSL Trigger: CAATGATTTTAGAGACATCCACAACTGGACAGAGCT...AAATAAATAAATCATAGAGACACCCGTGCTGGGAATCTCTGAGAAGTGTGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 90 bp | GCGGAGAGGACCCAGACGCCTGCGCACACGGCCCTCCGTATTCGGTaGTGGTGGCGCTGCCAGGAGGGAGAGGTGTTGGTGAGGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: AERTQTPAHTALRIR*WWRCQEGEVLVRVT Trigger: CGTCACCCTCACCAACACCTCTCCCTCCTGGCAGCGCCACCAGCACCGAATACGGAGGGCCGTGTGCGCAGGCGTCTGGGTCCTCTCCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 90 bp | CACCACCTCCGGCAGTGGGATAATGGCGGAGAGGACCCAGACGCCTaGGCACACGGCCCTCCGTATTCGGTGCTGGTGGCGCTGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HHLRQWDNGGEDPDA*AHGPPYSVLVALPG Trigger: TCCTGGCAGCGCCACCAGCACCGAATACGGAGGGCCGTGTGCGCAGGCGTCTGGGTCCTCTCCGCCATTATCCCACTGCCGGAGGTGGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 90 bp | GGGCTCGGAGCCATCCAACAGCTGGATGTGCACCACCTCCGGCAGTaGGATAATGGCGGAGAGGACCCAGACGCCTGCGCACACGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLGAIQQLDVHHLRQ*DNGGEDPDACAHGP Trigger: AGGGCCGTGTGCGCAGGCGTCTGGGTCCTCTCCGCCATTATCCCACTGCCGGAGGTGGTGCACATCCAGCTGTTGGATGGCTCCGAGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 90 bp | AAGAAGAAGAGGAGGCTCGACCACCTGCTGCCCTGGCCTGCTCCTTaGGAAGGTAACGGACCACAAGGCTCAGCAGTCGGCCCCGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KKKRRLDHLLPWPAP*EGNGPQGSAVGPGS Trigger: GCTTCCGGGGCCGACTGCTGAGCCTTGTGGTCCGTTACCTTCCCAAGGAGCAGGCCAGGGCAGCAGGTGGTCGAGCCTCCTCTTCTTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 90 bp | GCTAGGAAGAGGCACATGGGCTCGGAGCCATCCAACAGCTGGATGTaGACCACCTCCGGCAGTGGGATAATGGCGGAGAGGACCCAGACG | + |
|
Preference number: 5 (lower is better) Translates to: ARKRHMGSEPSNSWM*TTSGSGIMAERTQT Trigger: CGTCTGGGTCCTCTCCGCCATTATCCCACTGCCGGAGGTGGTGCACATCCAGCTGTTGGATGGCTCCGAGCCCATGTGCCTCTTCCTAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 90 bp | GCTGCAGCGGGCAGGCTGCCCTCTTTGGTAATGATGATGGAGTGCTaGGTGGAAGAAGAAGAGGAGGCTCGACCACCTGCTGCCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAAGRLPSLVMMMEC*VEEEEEARPPAALA Trigger: GGCCAGGGCAGCAGGTGGTCGAGCCTCCTCTTCTTCTTCCACCCAGCACTCCATCATCATTACCAAAGAGGGCAGCCTGCCCGCTGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS-3UTR CAA 90 bp | GCTGACTTGCTCCAGCTTGCTCTGGCCTGCTCCGGCCTGCTCCAGCTCGTTCCGGGCAGGCTGCCCTCTTaGGTAATGATGATGGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ADLLQLALACSGLLQLVPGRLPS*VMMMEC Trigger: GCACTCCATCATCATTACCAAAGAGGGCAGCCTGCC...CGGAACGAGCTGGAGCAGGCCGGAGCAGGCCAGAGCAAGCTGGAGCAAGTCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS TCA 90 bp | GGTAACGGACCACAAGGCTCAGCAGTCGGCCCCGGAAGCTCGGGCTaGGAAAGTTGTAGAGGATGGGGTTGGCCACACAGTGCAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GNGPQGSAVGPGSSG*ESCRGWGWPHSAAW Trigger: CCATGCTGCACTGTGTGGCCAACCCCATCCTCTACAACTTTCTCAGCCCGAGCTTCCGGGGCCGACTGCTGAGCCTTGTGGTCCGTTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 90 bp | TCCGCTGCAGCGGGCAGGCTGCCCTCTTTGGTAATGATGATGGAGTaGTGGGTGGAAGAAGAAGAGGAGGCTCGACCACCTGCTGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAAAGRLPSLVMMME*WVEEEEEARPPAAL Trigger: CAGGGCAGCAGGTGGTCGAGCCTCCTCTTCTTCTTCCACCCAGCACTCCATCATCATTACCAAAGAGGGCAGCCTGCCCGCTGCAGCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 90 bp | GGGCCCAGGCGCTGTACGTTTCAAAAGGTGCTAGGAAGAGGCACATaGGCTCGGAGCCATCCAACAGCTGGATGTGCACCACCTCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GPRRCTFQKVLGRGT*ARSHPTAGCAPPPA Trigger: TGCCGGAGGTGGTGCACATCCAGCTGTTGGATGGCTCCGAGCCCATGTGCCTCTTCCTAGCACCTTTTGAAACGTACAGCGCCTGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 90 bp | GATGATGGAGTGCTGGGTGGAAGAAGAAGAGGAGGCTCGACCACCTaGTGCCCTGGCCTGCTCCTTGGGAAGGTAACGGACCACAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DDGVLGGRRRGGSTT*CPGLLLGKVTDHKA Trigger: AGCCTTGTGGTCCGTTACCTTCCCAAGGAGCAGGCCAGGGCAGCAGGTGGTCGAGCCTCCTCTTCTTCTTCCACCCAGCACTCCATCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 90 bp | AAAGGTGCTAGGAAGAGGCACATGGGCTCGGAGCCATCCAACAGCTaGATGTGCACCACCTCCGGCAGTGGGATAATGGCGGAGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: KGARKRHMGSEPSNS*MCTTSGSGIMAERT Trigger: GGTCCTCTCCGCCATTATCCCACTGCCGGAGGTGGTGCACATCCAGCTGTTGGATGGCTCCGAGCCCATGTGCCTCTTCCTAGCACCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 90 bp | TGGCAAAGACAACTATGTAAGCCCACATCAACAGGCAGTGGCGCCTaGTCTCCGTCTGCCTTTGCCTCCGAAGCCGGCAGGCTGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WQRQLCKPTSTGSGA*SPSAFASEAGRLSG Trigger: TCCTGACAGCCTGCCGGCTTCGGAGGCAAAGGCAGACGGAGAGCAGGCGCCACTGCCTGTTGATGTGGGCTTACATAGTTGTCTTTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS TCA 90 bp | GGATGTACAGGTTCAGCATCCCCACCCGGCCTGAACGGCGGCAGTTaGCACATATCACCAGGACGTTCTCTACTAAGCCTACCACGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GCTGSASPPGLNGGS*HISPGRSLLSLPRR Trigger: TCTTCGTGGTAGGCTTAGTAGAGAACGTCCTGGTGATATGTGTCAACTGCCGCCGTTCAGGCCGGGTGGGGATGCTGAACCTGTACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS-3UTR CAA 90 bp | TTTCCCCTTCCGGCCAGGGTGATTTATGAAACAAGGGCAGCTAGTTCCCTCTGCTCGGTAAAGGTCTGGTaGAAGAGGTGGAGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FPLPARVIYETRAASSLCSVKVW*KRWSSS Trigger: AGAGCTGCTCCACCTCTTCAACCAGACCTTTACCGA...GCAGAGGGAACTAGCTGCCCTTGTTTCATAAATCACCCTGGCCGGAAGGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 90 bp | TCGGTAAAGGTCTGGTTGAAGAGGTGGAGCAGCTCTGTCCAGTTGTaGATGTCTCTAAAATCATTGTCCGGTTCCAAGGTGGAGACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SVKVWLKRWSSSVQL*MSLKSLSGSKVETG Trigger: GCCCGTCTCCACCTTGGAACCGGACAATGATTTTAGAGACATCCACAACTGGACAGAGCTGCTCCACCTCTTCAACCAGACCTTTACCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 90 bp | AAGACGAAGAGGACCACGTGTTTGGTGTTCTCGTTGAATTCTATGTaGCAATCGGTAAAGGTCTGGTTGAAGAGGTGGAGCAGCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KTKRTTCLVFSLNSM*QSVKVWLKRWSSSV Trigger: GACAGAGCTGCTCCACCTCTTCAACCAGACCTTTACCGATTGCCACATAGAATTCAACGAGAACACCAAACACGTGGTCCTCTTCGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS-3UTR CAA 90 bp | CTTGTCCTCACAACTTGGAATATCAACAGGCAGACAAACACAAAGGGAAAGTTTCCTGAACGGCGGCAGTaGACACATATCACCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LVLTTWNINRQTNTKGKFPERRQ*THITRT Trigger: CGTCCTGGTGATATGTGTCAACTGCCGCCGTTCAGG...AAACTTTCCCTTTGTGTTTGTCTGCCTGTTGATATTCCAAGTTGTGAGGACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS-3UTR CAA 90 bp | AAAACCATTCTCGGCGTACTGCTGGTAGGAGAACCAGGAAGACAGAGATCAGAGTGTTTGGTGTTCTCGTaGAATTCTATGTGGCAATCG | + |
|
Preference number: 5 (lower is better) Translates to: KTILGVLLVGEPGRQRSECLVFS*NSMWQS Trigger: CGATTGCCACATAGAATTCAACGAGAACACCAAACA...CTCTGATCTCTGTCTTCCTGGTTCTCCTACCAGCAGTACGCCGAGAATGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS-3UTR CAA 90 bp | GGAAGACATCTGCCATTGGTCTTTAGGTTTGGTCTACAGTCACACACACACACACAGGCTGTCAGGATATaGAACACTGCGATGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRHLPLVFRFGLQSHTHTQAVRI*NTAMRR Trigger: TCTTCTCATCGCAGTGTTCAATATCCTGACAGCCTG...TGTGTGTGTGTGTGACTGTAGACCAAACCTAAAGACCAATGGCAGATGTCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 90 bp | TCGTTGAATTCTATGTGGCAATCGGTAAAGGTCTGGTTGAAGAGGTaGAGCAGCTCTGTCCAGTTGTGGATGTCTCTAAAATCATTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLNSMWQSVKVWLKR*SSSVQLWMSLKSLS Trigger: GGACAATGATTTTAGAGACATCCACAACTGGACAGAGCTGCTCCACCTCTTCAACCAGACCTTTACCGATTGCCACATAGAATTCAACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 72 bp | ACCCAGACGCCTGCGCACACGGCCCTCCGTATTCGGTaGTGGTGGCGCTGCCAGGAGGGAGAGGTGTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TQTPAHTALRIR*WWRCQEGEVLV Trigger: CACCAACACCTCTCCCTCCTGGCAGCGCCACCAGCACCGAATACGGAGGGCCGTGTGCGCAGGCGTCTGGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 72 bp | CGGCAGTGGGATAATGGCGGAGAGGACCCAGACGCCTaGGCACACGGCCCTCCGTATTCGGTGCTGGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RQWDNGGEDPDA*AHGPPYSVLVA Trigger: CGCCACCAGCACCGAATACGGAGGGCCGTGTGCGCAGGCGTCTGGGTCCTCTCCGCCATTATCCCACTGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 72 bp | ACGCCTGCGCACACGGCCCTCCGTATTCGGTGCTGGTaGCGCTGCCAGGAGGGAGAGGTGTTGGTGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TPAHTALRIRCW*RCQEGEVLVRV Trigger: CACCCTCACCAACACCTCTCCCTCCTGGCAGCGCCACCAGCACCGAATACGGAGGGCCGTGTGCGCAGGCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 72 bp | CAGACGCCTGCGCACACGGCCCTCCGTATTCGGTGCTaGTGGCGCTGCCAGGAGGGAGAGGTGTTGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QTPAHTALRIRC*WRCQEGEVLVR Trigger: CCTCACCAACACCTCTCCCTCCTGGCAGCGCCACCAGCACCGAATACGGAGGGCCGTGTGCGCAGGCGTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 72 bp | GCCCACATCAACAGGCAGTGGCGCCTGCTCTCCGTCTaGCTTTGCCTCCGAAGCCGGCAGGCTGTCAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: AHINRQWRLLSV*LCLRSRQAVRI Trigger: TATCCTGACAGCCTGCCGGCTTCGGAGGCAAAGGCAGACGGAGAGCAGGCGCCACTGCCTGTTGATGTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 72 bp | GCCATCCAACAGCTGGATGTGCACCACCTCCGGCAGTaGGATAATGGCGGAGAGGACCCAGACGCCTGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: AIQQLDVHHLRQ*DNGGEDPDACA Trigger: TGCGCAGGCGTCTGGGTCCTCTCCGCCATTATCCCACTGCCGGAGGTGGTGCACATCCAGCTGTTGGATGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 72 bp | AGGCACATGGGCTCGGAGCCATCCAACAGCTGGATGTaGACCACCTCCGGCAGTGGGATAATGGCGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RHMGSEPSNSWM*TTSGSGIMAER Trigger: CCTCTCCGCCATTATCCCACTGCCGGAGGTGGTGCACATCCAGCTGTTGGATGGCTCCGAGCCCATGTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 72 bp | CTGGGTGGAAGAAGAAGAGGAGGCTCGACCACCTGCTaGCCTGGCCTGCTCCTTGGGAAGGTAACGGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: LGGRRRGGSTTC*PGLLLGKVTDH Trigger: GTGGTCCGTTACCTTCCCAAGGAGCAGGCCAGGGCAGCAGGTGGTCGAGCCTCCTCTTCTTCTTCCACCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 72 bp | CAACTATGTAAGCCCACATCAACAGGCAGTGGCGCCTaGTCTCCGTCTGCCTTTGCCTCCGAAGCCGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QLCKPTSTGSGA*SPSAFASEAGR Trigger: CCTGCCGGCTTCGGAGGCAAAGGCAGACGGAGAGCAGGCGCCACTGCCTGTTGATGTGGGCTTACATAGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 72 bp | AGGAAGAGGCACATGGGCTCGGAGCCATCCAACAGCTaGATGTGCACCACCTCCGGCAGTGGGATAATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RKRHMGSEPSNS*MCTTSGSGIMA Trigger: CGCCATTATCCCACTGCCGGAGGTGGTGCACATCCAGCTGTTGGATGGCTCCGAGCCCATGTGCCTCTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS TCA 72 bp | AGTGTAGGTGAGGTGTTTGGAGGCGGAGAGGACGCCTaGACGTTTCGGATGGGGTGGGTGTGGAGATCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SVGEVFGGGEDA*TFRMGWVWRSA Trigger: AGCGGATCTCCACACCCACCCCATCCGAAACGTTCAGGCGTCCTCTCCGCCTCCAAACACCTCACCTACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 72 bp | ATCAACAGGCAGTGGCGCCTGCTCTCCGTCTGCCTTTaGCTCCGAAGCCGGCAGGCTGTCAGGATATTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: INRQWRLLSVCL*LRSRQAVRILN Trigger: GTTCAATATCCTGACAGCCTGCCGGCTTCGGAGGCAAAGGCAGACGGAGAGCAGGCGCCACTGCCTGTTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CAA 72 bp | CATCAACAGGCAGTGGCGCCTGCTCTCCGTCTGCCTTaGCCTCCGAAGCCGGCAGGCTGTCAGGATATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: HQQAVAPALRLP*PPKPAGCQDIE Trigger: TTCAATATCCTGACAGCCTGCCGGCTTCGGAGGCAAAGGCAGACGGAGAGCAGGCGCCACTGCCTGTTGATG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CAA 90 bp | GTAAGCCCACATCAACAGGCAGTGGCGCCTGCTCTCCGTCTGCCTTaGCCTCCGAAGCCGGCAGGCTGTCAGGATATTGAACACTGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: VSPHQQAVAPALRLP*PPKPAGCQDIEHCD Trigger: ATCGCAGTGTTCAATATCCTGACAGCCTGCCGGCTTCGGAGGCAAAGGCAGACGGAGAGCAGGCGCCACTGCCTGTTGATGTGGGCTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CAA 90 bp | ATGGGGTGGGTGTGGAGATCCGCTGCAGCGGGCAGGCTGCCCTCTTaGGTAATGATGATGGAGTGCTGGGTGGAAGAAGAAGAGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: MGWVWRSAAAGRLPS*VMMMECWVEEEEEA Trigger: AGCCTCCTCTTCTTCTTCCACCCAGCACTCCATCATCATTACCAAAGAGGGCAGCCTGCCCGCTGCAGCGGATCTCCACACCCACCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS GCA 72 bp | GCGGGCAGGCTGCCCTCTTTGGTAATGATGATGGAGTaGTGGGTGGAAGAAGAAGAGGAGGCTCGACCACCT | + |
|
Preference number: 6 (lower is better) Translates to: AGRLPSLVMMME*WVEEEEEARPP Trigger: AGGTGGTCGAGCCTCCTCTTCTTCTTCCACCCAGCACTCCATCATCATTACCAAAGAGGGCAGCCTGCCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS TCA 72 bp | GGTTCAGCATCCCCACCCGGCCTGAACGGCGGCAGTTaGCACATATCACCAGGACGTTCTCTACTAAGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: GSASPPGLNGGS*HISPGRSLLSL Trigger: TAGGCTTAGTAGAGAACGTCCTGGTGATATGTGTCAACTGCCGCCGTTCAGGCCGGGTGGGGATGCTGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS TCA 72 bp | GTTGAGGATGTACAGGTTCAGCATCCCCACCCGGCCTaGACGGCGGCAGTTGACACATATCACCAGGACGTT | + |
|
Preference number: 6 (lower is better) Translates to: VEDVQVQHPHPA*TAAVDTYHQDV Trigger: AACGTCCTGGTGATATGTGTCAACTGCCGCCGTTCAGGCCGGGTGGGGATGCTGAACCTGTACATCCTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CAA 72 bp | AGGTTCAGCATCCCCACCCGGCCTGAACGGCGGCAGTaGACACATATCACCAGGACGTTCTCTACTAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RFSIPTRPERRQ*THITRTFSTKP Trigger: AGGCTTAGTAGAGAACGTCCTGGTGATATGTGTCAACTGCCGCCGTTCAGGCCGGGTGGGGATGCTGAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CAA 72 bp | GTGTGGAGATCCGCTGCAGCGGGCAGGCTGCCCTCTTaGGTAATGATGATGGAGTGCTGGGTGGAAGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VWRSAAAGRLPS*VMMMECWVEEE Trigger: TTCTTCTTCCACCCAGCACTCCATCATCATTACCAAAGAGGGCAGCCTGCCCGCTGCAGCGGATCTCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CAA 90 bp | AGGATGTACAGGTTCAGCATCCCCACCCGGCCTGAACGGCGGCAGTaGACACATATCACCAGGACGTTCTCTACTAAGCCTACCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: RMYRFSIPTRPERRQ*THITRTFSTKPTTK Trigger: CTTCGTGGTAGGCTTAGTAGAGAACGTCCTGGTGATATGTGTCAACTGCCGCCGTTCAGGCCGGGTGGGGATGCTGAACCTGTACATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CAA 90 bp | CTCTCCGTCTGCCTTTGCCTCCGAAGCCGGCAGGCTGTCAGGATATaGAACACTGCGATGAGAAGAAAAGGCAGTAGGAAGCCCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: LSVCLCLRSRQAVRI*NTAMRRKGSRKPRM Trigger: CATCCTGGGCTTCCTACTGCCTTTTCTTCTCATCGCAGTGTTCAATATCCTGACAGCCTGCCGGCTTCGGAGGCAAAGGCAGACGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 72 bp | CGCTGTACGTTTCAAAAGGTGCTAGGAAGAGGCACATaGGCTCGGAGCCATCCAACAGCTGGATGTGCACCA | + |
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Preference number: 6 (lower is better) Translates to: RCTFQKVLGRGT*ARSHPTAGCAP Trigger: TGGTGCACATCCAGCTGTTGGATGGCTCCGAGCCCATGTGCCTCTTCCTAGCACCTTTTGAAACGTACAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CAA 72 bp | AGCAGCTCTGTCCAGTTGTGGATGTCTCTAAAATCATaGTCCGGTTCCAAGGTGGAGACGGGCCTGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSVQLWMSLKS*SGSKVETGLGL Trigger: CAGCCCCAGGCCCGTCTCCACCTTGGAACCGGACAATGATTTTAGAGACATCCACAACTGGACAGAGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CAA 90 bp | AAGAGGTGGAGCAGCTCTGTCCAGTTGTGGATGTCTCTAAAATCATaGTCCGGTTCCAAGGTGGAGACGGGCCTGGGGCTGGGTATGACT | + |
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Preference number: 6 (lower is better) Translates to: KRWSSSVQLWMSLKS*SGSKVETGLGLGMT Trigger: AGTCATACCCAGCCCCAGGCCCGTCTCCACCTTGGAACCGGACAATGATTTTAGAGACATCCACAACTGGACAGAGCTGCTCCACCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 72 bp | TCACCAGGACGTTCTCTACTAAGCCTACCACGAAGATaGCCAGGTAGAAGACGAAGAGGACCACGTGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: SPGRSLLSLPRR*PGRRRRGPRVW Trigger: CCAAACACGTGGTCCTCTTCGTCTTCTACCTGGCCATCTTCGTGGTAGGCTTAGTAGAGAACGTCCTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CAA 90 bp | CAATCGGTAAAGGTCTGGTTGAAGAGGTGGAGCAGCTCTGTCCAGTaGTGGATGTCTCTAAAATCATTGTCCGGTTCCAAGGTGGAGACG | + |
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Preference number: 6 (lower is better) Translates to: QSVKVWLKRWSSSVQ*WMSLKSLSGSKVET Trigger: CGTCTCCACCTTGGAACCGGACAATGATTTTAGAGACATCCACAACTGGACAGAGCTGCTCCACCTCTTCAACCAGACCTTTACCGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 72 bp | GTCTGGTTGAAGAGGTGGAGCAGCTCTGTCCAGTTGTaGATGTCTCTAAAATCATTGTCCGGTTCCAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VWLKRWSSSVQL*MSLKSLSGSKV Trigger: CACCTTGGAACCGGACAATGATTTTAGAGACATCCACAACTGGACAGAGCTGCTCCACCTCTTCAACCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 72 bp | AGGACCACGTGTTTGGTGTTCTCGTTGAATTCTATGTaGCAATCGGTAAAGGTCTGGTTGAAGAGGTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RTTCLVFSLNSM*QSVKVWLKRWS Trigger: GCTCCACCTCTTCAACCAGACCTTTACCGATTGCCACATAGAATTCAACGAGAACACCAAACACGTGGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CAA 72 bp | AAGGTCTGGTTGAAGAGGTGGAGCAGCTCTGTCCAGTaGTGGATGTCTCTAAAATCATTGTCCGGTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: KVWLKRWSSSVQ*WMSLKSLSGSK Trigger: CTTGGAACCGGACAATGATTTTAGAGACATCCACAACTGGACAGAGCTGCTCCACCTCTTCAACCAGACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CCA 72 bp | TCTATGTGGCAATCGGTAAAGGTCTGGTTGAAGAGGTaGAGCAGCTCTGTCCAGTTGTGGATGTCTCTAAAA | + |
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Preference number: 6 (lower is better) Translates to: SMWQSVKVWLKR*SSSVQLWMSLK Trigger: TTTTAGAGACATCCACAACTGGACAGAGCTGCTCCACCTCTTCAACCAGACCTTTACCGATTGCCACATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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| CDS CAA 90 bp | TTGGTGTTCTCGTTGAATTCTATGTGGCAATCGGTAAAGGTCTGGTaGAAGAGGTGGAGCAGCTCTGTCCAGTTGTGGATGTCTCTAAAA | + |
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Preference number: 6 (lower is better) Translates to: LVFSLNSMWQSVKVW*KRWSSSVQLWMSLK Trigger: TTTTAGAGACATCCACAACTGGACAGAGCTGCTCCACCTCTTCAACCAGACCTTTACCGATTGCCACATAGAATTCAACGAGAACACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079692.6 |
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