Pregenerated sensors for GPR180 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022131Ensembl transcript IDs: ENSMUST00000022728.4
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCACGTGGAAACTGTTTCAGTCACCTTGAAACAACATTCTTTCTaGGAAGTTCACTGTTTGAGTTCACTCCGGAGCTTCTATTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: FHVETVSVTLKQHSF*EVHCLSSLRSFYSF Trigger: AAAGGAATAGAAGCTCCGGAGTGAACTCAAACAGTGAACTTCCCAGAAAGAATGTTGTTTCAAGGTGACTGAAACAGTTTCCACGTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| 3UTR-3UTR CCA 90 bp | GTTCACTGTTTGAGTTCACTCCGGAGCTTCTATTCCTTTCTGCTGAGCCCGCTGCACTTCTCCATTCACTaGTTCTCTCCACAAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: VHCLSSLRSFYSFLLSPLHFSIH*FSPQNS Trigger: TGAGTTTTGTGGAGAGAACCAGTGAATGGAGAAGTG...CAGCGGGCTCAGCAGAAAGGAATAGAAGCTCCGGAGTGAACTCAAACAGTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| 3UTR-3UTR GCA 90 bp | TGTGACCACCTGGCCCACGTGTACTCTAAGCAGTCCTTTTCACATTTATTTCCATGCGTTGGATCCTATTaGACTTCTCCATTCACTGGT | + |
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Preference number: 2 (lower is better) Translates to: CDHLAHVYSKQSFSHLFPCVGSY*TSPFTG Trigger: ACCAGTGAATGGAGAAGTGCAATAGGATCCAACGCA...TGGAAATAAATGTGAAAAGGACTGCTTAGAGTACACGTGGGCCAGGTGGTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| 3UTR CAA 90 bp | AGTCCTTTTCACATTTATTTCCACGTGGAAACTGTTTCAGTCACCTaGAAACAACATTCTTTCTGGGAAGTTCACTGTTTGAGTTCACTC | + |
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Preference number: 2 (lower is better) Translates to: SPFHIYFHVETVSVT*KQHSFWEVHCLSSL Trigger: GAGTGAACTCAAACAGTGAACTTCCCAGAAAGAATGTTGTTTCAAGGTGACTGAAACAGTTTCCACGTGGAAATAAATGTGAAAAGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| 3UTR GCA 72 bp | AAAGGCACAGCAAGACGGTGCTGCGTTGGATCCTATTaGACTTCTCCATTCACTGGTTCTCTCCACAAAACT | + |
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Preference number: 3 (lower is better) Translates to: KGTARRCCVGSY*TSPFTGSLHKT Trigger: AGTTTTGTGGAGAGAACCAGTGAATGGAGAAGTGCAATAGGATCCAACGCAGCACCGTCTTGCTGTGCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| 3UTR-3UTR CAA 90 bp | GTTTCAGTCACCTTGAAACAACATTCTTTCTGGGAAGTTCACTGTTTGAGTTCACTGCGTTGGATCCTATaGCACTTCTCCATTCACTGG | + |
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Preference number: 3 (lower is better) Translates to: VSVTLKQHSFWEVHCLSSLRWIL*HFSIHW Trigger: CCAGTGAATGGAGAAGTGCAATAGGATCCAACGCAG...TGAACTCAAACAGTGAACTTCCCAGAAAGAATGTTGTTTCAAGGTGACTGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| 3UTR CCA 72 bp | GAAACTGTTTCAGTCACCTTGAAACAACATTCTTTCTaGGAAGTTCACTGTTTGAGTTCACTCCGGAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: ETVSVTLKQHSF*EVHCLSSLRSF Trigger: GAAGCTCCGGAGTGAACTCAAACAGTGAACTTCCCAGAAAGAATGTTGTTTCAAGGTGACTGAAACAGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR TCA 90 bp | CGTTGGATCCTATTGCACTTCTCCATTCACTGGTTCTCTCCACAAAACTCAAGCGGGCCGCGGCGCTGCTaGAGCTGCCACGCAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RWILLHFSIHWFSPQNSSGPRRC*SCHAGS Trigger: AGACCCTGCGTGGCAGCTTCAGCAGCGCCGCGGCCC...GCTTGAGTTTTGTGGAGAGAACCAGTGAATGGAGAAGTGCAATAGGATCCAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR TCA 90 bp | TTGAGTTCACTCCGGAGCTTCTATTCCTTTCTGCTGAGCCCGCTGACGTTCAGTCCCCTGGGGGCTCTCTaGGTCATCCCTGCAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LSSLRSFYSFLLSPLTFSPLGAL*VIPAGE Trigger: TTCACCTGCAGGGATGACTCAGAGAGCCCCCAGGGG...ACTGAACGTCAGCGGGCTCAGCAGAAAGGAATAGAAGCTCCGGAGTGAACTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR TCA 90 bp | TGTGACCACCTGGCCCACGTGTACTCTAAGCAGTCCTTTTCACATTTATTTCCAACCAGCAGCTGCACGTaGGGGCTACCGCCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: CDHLAHVYSKQSFSHLFPTSSCT*GLPPAA Trigger: GGCTGCTGGCGGTAGCCCTCACGTGCAGCTGCTGGT...TGGAAATAAATGTGAAAAGGACTGCTTAGAGTACACGTGGGCCAGGTGGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR TCA 90 bp | GGCATCGCAGGTGTGACCACCTGGCCCACGTGTACTCTAAGCAGTCCTTTTCACGAATGTGCGCTGTGGTaGCTGGTGTCTTCAAACTGC | + |
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Preference number: 4 (lower is better) Translates to: GIAGVTTWPTCTLSSPFHECALW*LVSSNC Trigger: GCAGTTTGAAGACACCAGTCACCACAGCGCACATTC...GTGAAAAGGACTGCTTAGAGTACACGTGGGCCAGGTGGTCACACCTGCGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR GCA 90 bp | AGTCACCTTGAAACAACATTCTTTCTGGGAAGTTCACTGTTTGAGTTCACTCCGTGCCACGCAGGGTCTTaGCCTGGCCGCCCTGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SHLETTFFLGSSLFEFTPCHAGS*PGRPAA Trigger: GGCCGCAGGGCGGCCAGGGCAAGACCCTGCGTGGCA...CGGAGTGAACTCAAACAGTGAACTTCCCAGAAAGAATGTTGTTTCAAGGTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR CCA 90 bp | AGTCACCTTGAAACAACATTCTTTCTGGGAAGTTCACTGTTTGAGTTCACTCCGCGCAGGGTCTTGCCCTaGCCGCCCTGCGGCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: SHLETTFFLGSSLFEFTPRRVLP*PPCGHQ Trigger: CTGGTGGCCGCAGGGCGGCCAGGGCAAGACCCTGCG...CGGAGTGAACTCAAACAGTGAACTTCCCAGAAAGAATGTTGTTTCAAGGTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR CCA 90 bp | CGTTGGATCCTATTGCACTTCTCCATTCACTGGTTCTCTCCACAAAACTCAAGCAAATGGCCGATGCTCTaGCCCTGGGCGTCGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RWILLHFSIHWFSPQNSSKWPML*PWASRA Trigger: GGCCCGCGACGCCCAGGGCCAGAGCATCGGCCATTT...GCTTGAGTTTTGTGGAGAGAACCAGTGAATGGAGAAGTGCAATAGGATCCAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR GCA 90 bp | CGTTGGATCCTATTGCACTTCTCCATTCACTGGTTCTCTCCACAAAACTCAAGCACTCGAAATGGCCGATaGTCTGGCCCTGGGCGTCGC | + |
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Preference number: 4 (lower is better) Translates to: RWILLHFSIHWFSPQNSSTRNGR*SGPGRR Trigger: GCGACGCCCAGGGCCAGAGCATCGGCCATTTCGAGT...GCTTGAGTTTTGTGGAGAGAACCAGTGAATGGAGAAGTGCAATAGGATCCAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR CCA 90 bp | TTGAGTTCACTCCGGAGCTTCTATTCCTTTCTGCTGAGCCCGCTGACGTTCAGTGTGCGCTGTGGTGACTaGTGTCTTCAAACTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LSSLRSFYSFLLSPLTFSVRCGD*CLQTAP Trigger: GGGAGCAGTTTGAAGACACCAGTCACCACAGCGCAC...ACTGAACGTCAGCGGGCTCAGCAGAAAGGAATAGAAGCTCCGGAGTGAACTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR TCA 90 bp | GTCACCTTGAAACAACATTCTTTCTGGGAAGTTCACTGTTTGAGTTCACTCCGGGCAGCTGGGACACTGTaGGGTTGTGCTCCGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VTLKQHSFWEVHCLSSLRAAGTL*GCAPSG Trigger: CCCAGACGGAGCACAACCTCACAGTGTCCCAGCTGC...CCGGAGTGAACTCAAACAGTGAACTTCCCAGAAAGAATGTTGTTTCAAGGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR TCA 90 bp | CAAGACGGTGCTGCGTTGGATCCTATTGCACTTCTCCATTCACTGGTTCTCTCCTCTCTGGCGCTAAAATaGTCCAGTGGGTTTCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: QDGAALDPIALLHSLVLSSLALK*SSGFPS Trigger: CGAGGGAAACCCACTGGATCATTTTAGCGCCAGAGA...GGAGAGAACCAGTGAATGGAGAAGTGCAATAGGATCCAACGCAGCACCGTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR TCA 90 bp | AAGACGGTGCTGCGTTGGATCCTATTGCACTTCTCCATTCACTGGTTCTCTCCAGCAGCAGTGCAGTGGTaGGGACCTTTAAGATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: KTVLRWILLHFSIHWFSPAAVQW*GPLRWC Trigger: ACACCATCTTAAAGGTCCTCACCACTGCACTGCTGC...TGGAGAGAACCAGTGAATGGAGAAGTGCAATAGGATCCAACGCAGCACCGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR CCA 90 bp | AGCTTCTATTCCTTTCTGCTGAGCCCGCTGACGTTCAGTTCTATAAATAAGACGCCGTGGAACTCGAAATaGCCGATGCTCTGGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SFYSFLLSPLTFSSINKTPWNSK*PMLWPW Trigger: CCAGGGCCAGAGCATCGGCCATTTCGAGTTCCACGG...CGTCTTATTTATAGAACTGAACGTCAGCGGGCTCAGCAGAAAGGAATAGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR CCA 90 bp | AGTCACCTTGAAACAACATTCTTTCTGGGAAGTTCACTGTTTGAGTTCACTCCGAACACTCGCCATGTCTaGGGAGCGGGCAGCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SHLETTFFLGSSLFEFTPNTRHV*GAGSWD Trigger: GTCCCAGCTGCCCGCTCCCCAGACATGGCGAGTGTT...CGGAGTGAACTCAAACAGTGAACTTCCCAGAAAGAATGTTGTTTCAAGGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR CCA 90 bp | GTTCACTGTTTGAGTTCACTCCGGAGCTTCTATTCCTTTCTGCTGAGCCCGCTGTGTGTGCAGACGAGATaGTCAGTGGTAGCGTTACTG | + |
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Preference number: 4 (lower is better) Translates to: VHCLSSLRSFYSFLLSPLCVQTR*SVVALL Trigger: CAGTAACGCTACCACTGACCATCTCGTCTGCACACA...CAGCGGGCTCAGCAGAAAGGAATAGAAGCTCCGGAGTGAACTCAAACAGTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR TCA 90 bp | CAAGACGGTGCTGCGTTGGATCCTATTGCACTTCTCCATTCACTGGTTCTCTCCAGCAGGTACAGCATCTaGATTTGGGAGGCAATGTCA | + |
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Preference number: 4 (lower is better) Translates to: QDGAALDPIALLHSLVLSSRYSI*IWEAMS Trigger: TGACATTGCCTCCCAAATTCAGATGCTGTACCTGCT...GGAGAGAACCAGTGAATGGAGAAGTGCAATAGGATCCAACGCAGCACCGTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR GCA 90 bp | TGTGACCACCTGGCCCACGTGTACTCTAAGCAGTCCTTTTCACATTTATTTCCATGGAGCGGTCTGCTCTaGGACTTCTTCATCCGCACT | + |
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Preference number: 4 (lower is better) Translates to: CDHLAHVYSKQSFSHLFPWSGLL*DFFIRT Trigger: AGTGCGGATGAAGAAGTCGCAGAGCAGACCGCTCCA...TGGAAATAAATGTGAAAAGGACTGCTTAGAGTACACGTGGGCCAGGTGGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| 3UTR CAA 72 bp | CAAAGGCACAGCAAGACGGTGCTGCGTTGGATCCTATaGCACTTCTCCATTCACTGGTTCTCTCCACAAAAC | + |
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Preference number: 4 (lower is better) Translates to: QRHSKTVLRWIL*HFSIHWFSPQN Trigger: GTTTTGTGGAGAGAACCAGTGAATGGAGAAGTGCAATAGGATCCAACGCAGCACCGTCTTGCTGTGCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR TCA 90 bp | AGCTTCTATTCCTTTCTGCTGAGCCCGCTGACGTTCAGTTCTATAAATAAGACGAAGGCTGAAGCAGCTTaGAGCAGCAGTGCAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: SFYSFLLSPLTFSSINKTKAEAA*SSSAVV Trigger: CACCACTGCACTGCTGCTTCAAGCTGCTTCAGCCTT...CGTCTTATTTATAGAACTGAACGTCAGCGGGCTCAGCAGAAAGGAATAGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR GCA 90 bp | AGTCACCTTGAAACAACATTCTTTCTGGGAAGTTCACTGTTTGAGTTCACTCCGCCCACTGGAGCGGTCTaGTCTGCGACTTCTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: SHLETTFFLGSSLFEFTPPTGAV*SATSSS Trigger: GGATGAAGAAGTCGCAGAGCAGACCGCTCCAGTGGG...CGGAGTGAACTCAAACAGTGAACTTCCCAGAAAGAATGTTGTTTCAAGGTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR CCA 90 bp | AGCTTCTATTCCTTTCTGCTGAGCCCGCTGACGTTCAGTTCTATAAATAAGACGAGGAAAAAGAACTCGTaGAGCCCGGACTCTCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: SFYSFLLSPLTFSSINKTRKKNS*SPDSLA Trigger: CGCCAGAGAGTCCGGGCTCCACGAGTTCTTTTTCCT...CGTCTTATTTATAGAACTGAACGTCAGCGGGCTCAGCAGAAAGGAATAGAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR CCA 90 bp | ACGTGTACTCTAAGCAGTCCTTTTCACATTTATTTCCACGTGGAAACTGTTTCAAGGTTGTGCTCCGTCTaGGTCACTGTCACTGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TCTLSSPFHIYFHVETVSRLCSV*VTVTVS Trigger: GCTGACAGTGACAGTGACCCAGACGGAGCACAACCT...TGAAACAGTTTCCACGTGGAAATAAATGTGAAAAGGACTGCTTAGAGTACACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR CCA 90 bp | AGTCACCTTGAAACAACATTCTTTCTGGGAAGTTCACTGTTTGAGTTCACTCCGACACACAGAAGAGCATaGTCACCGTGGAACTCGAAA | + |
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Preference number: 4 (lower is better) Translates to: SHLETTFFLGSSLFEFTPTHRRA*SPWNSK Trigger: TTTCGAGTTCCACGGTGACCATGCTCTTCTGTGTGT...CGGAGTGAACTCAAACAGTGAACTTCCCAGAAAGAATGTTGTTTCAAGGTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR TCA 90 bp | ACGTGTACTCTAAGCAGTCCTTTTCACATTTATTTCCACGTGGAAACTGTTTCAAGTCATCCCTGCAGGTaGACTTGTCGGCATAGAACA | + |
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Preference number: 4 (lower is better) Translates to: TCTLSSPFHIYFHVETVSSHPCR*TCRHRT Trigger: TGTTCTATGCCGACAAGTTCACCTGCAGGGATGACT...TGAAACAGTTTCCACGTGGAAATAAATGTGAAAAGGACTGCTTAGAGTACACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR GCA 90 bp | AGCTTCTATTCCTTTCTGCTGAGCCCGCTGACGTTCAGTTCTATAAATAAGACGTTTTCCAACAGCCACTaGTACGTTGTTGATTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: SFYSFLLSPLTFSSINKTFSNSH*YVVDSD Trigger: GTCAGAATCAACAACGTAGCAGTGGCTGTTGGAAAA...CGTCTTATTTATAGAACTGAACGTCAGCGGGCTCAGCAGAAAGGAATAGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR GCA 90 bp | TCACATTTATTTCCACGTGGAAACTGTTTCAGTCACCTTGAAACAACATTCTTTGACACTGTGAGGTTGTaGTCCGTCTGGGTCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: SHLFPRGNCFSHLETTFFDTVRL*SVWVTV Trigger: GACAGTGACCCAGACGGAGCACAACCTCACAGTGTC...AAAGAATGTTGTTTCAAGGTGACTGAAACAGTTTCCACGTGGAAATAAATGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR GCA 90 bp | CTAAGCAGTCCTTTTCACATTTATTTCCACGTGGAAACTGTTTCAGTCACCTTGACCTTTAAGATGGTGTaGATGGGTCCTCCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSSPFHIYFHVETVSVTLTFKMV*MGPPFF Trigger: GAAGAAGGGAGGACCCATGCACACCATCTTAAAGGT...CAAGGTGACTGAAACAGTTTCCACGTGGAAATAAATGTGAAAAGGACTGCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| 3UTR CAA 72 bp | CACATTTATTTCCACGTGGAAACTGTTTCAGTCACCTaGAAACAACATTCTTTCTGGGAAGTTCACTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: HIYFHVETVSVT*KQHSFWEVHCL Trigger: CAAACAGTGAACTTCCCAGAAAGAATGTTGTTTCAAGGTGACTGAAACAGTTTCCACGTGGAAATAAATGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CCA 90 bp | TCGCGGGCCGCGGCGCTGCTGAAGCTGCCACGCAGGGTCTTGCCCTaGCCGCCCTGCGGCCACCAGCAGCTGCACGTGAGGGCTACCGCC | + |
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Preference number: 5 (lower is better) Translates to: SRAAALLKLPRRVLP*PPCGHQQLHVRATA Trigger: GGCGGTAGCCCTCACGTGCAGCTGCTGGTGGCCGCAGGGCGGCCAGGGCAAGACCCTGCGTGGCAGCTTCAGCAGCGCCGCGGCCCGCGA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CCA 90 bp | CACAGAAGAGCATGGTCACCGTGGAACTCGAAATGGCCGATGCTCTaGCCCTGGGCGTCGCGGGCCGCGGCGCTGCTGAAGCTGCCACGC | + |
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Preference number: 5 (lower is better) Translates to: HRRAWSPWNSKWPML*PWASRAAALLKLPR Trigger: GCGTGGCAGCTTCAGCAGCGCCGCGGCCCGCGACGCCCAGGGCCAGAGCATCGGCCATTTCGAGTTCCACGGTGACCATGCTCTTCTGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS GCA 90 bp | TCAGCTGAGCTCGGGCTAGCCGCTCACTGCAGCTGTAGCCGGGGCTaGTCTCCAGCAGCTTCAGCCATTCCTGGGCTTGGAACAGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: SAELGLAAHCSCSRG*SPAASAIPGLGTGR Trigger: TCTACCTGTTCCAAGCCCAGGAATGGCTGAAGCTGCTGGAGAGCAGCCCCGGCTACAGCTGCAGTGAGCGGCTAGCCCGAGCTCAGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS GCA 90 bp | TCTGGGTCACTGTCACTGTCAGCTGAGCTCGGGCTAGCCGCTCACTaGAGCTGTAGCCGGGGCTGCTCTCCAGCAGCTTCAGCCATTCCT | + |
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Preference number: 5 (lower is better) Translates to: SGSLSLSAELGLAAH*SCSRGCSPAASAIP Trigger: AGGAATGGCTGAAGCTGCTGGAGAGCAGCCCCGGCTACAGCTGCAGTGAGCGGCTAGCCCGAGCTCAGCTGACAGTGACAGTGACCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS GCA 90 bp | ATGCCCGTGGACGCGGGTGTCGAGTCCCACTGGAGCGGTCTGCTCTaGGACTTCTTCATCCGCACTATTGTCCAGCCCATACACAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: MPVDAGVESHWSGLL*DFFIRTIVQPIHRL Trigger: GAGCCTGTGTATGGGCTGGACAATAGTGCGGATGAAGAAGTCGCAGAGCAGACCGCTCCAGTGGGACTCGACACCCGCGTCCACGGGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS GCA 90 bp | CTGCGATGCCCGTGGACGCGGGTGTCGAGTCCCACTGGAGCGGTCTaGTCTGCGACTTCTTCATCCGCACTATTGTCCAGCCCATACACA | + |
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Preference number: 5 (lower is better) Translates to: LRCPWTRVSSPTGAV*SATSSSALLSSPYT Trigger: TGTGTATGGGCTGGACAATAGTGCGGATGAAGAAGTCGCAGAGCAGACCGCTCCAGTGGGACTCGACACCCGCGTCCACGGGCATCGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS TCA 90 bp | CATAGAACACTCGCCATGTCTGGGGAGCGGGCAGCTGGGACACTGTaGGGTTGTGCTCCGTCTGGGTCACTGTCACTGTCAGCTGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: HRTLAMSGERAAGTL*GCAPSGSLSLSAEL Trigger: GAGCTCAGCTGACAGTGACAGTGACCCAGACGGAGCACAACCTCACAGTGTCCCAGCTGCCCGCTCCCCAGACATGGCGAGTGTTCTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CCA 90 bp | ACGATGAAGACTGCGATGCCCGTGGACGCGGGTGTCGAGTCCCACTaGAGCGGTCTGCTCTGCGACTTCTTCATCCGCACTATTGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: TMKTAMPVDAGVESH*SGLLCDFFIRTIVQ Trigger: CTGGACAATAGTGCGGATGAAGAAGTCGCAGAGCAGACCGCTCCAGTGGGACTCGACACCCGCGTCCACGGGCATCGCAGTCTTCATCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS GCA 90 bp | GCGCCAGGCAGATCCGTAAGACAATCAGCAAGAGCCCGGCTAAGCTaGGGTGTGAATGTGCGCTGTGGTGACTGGTGTCTTCAAACTGCT | + |
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Preference number: 5 (lower is better) Translates to: APGRSVRQSARARLS*GVNVRCGDWCLQTA Trigger: AGCAGTTTGAAGACACCAGTCACCACAGCGCACATTCACACCGCAGCTTAGCCGGGCTCTTGCTGATTGTCTTACGGATCTGCCTGGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CCA 90 bp | AAAGAACTCGTGGAGCCCGGACTCTCTGGCGCTAAAATGATCCAGTaGGTTTCCCTCGGCGTCCGGGTTGAGGAGCACCATTTCAAAGGG | + |
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Preference number: 5 (lower is better) Translates to: KELVEPGLSGAKMIQ*VSLGVRVEEHHFKG Trigger: CCCTTTGAAATGGTGCTCCTCAACCCGGACGCCGAGGGAAACCCACTGGATCATTTTAGCGCCAGAGAGTCCGGGCTCCACGAGTTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS GCA 90 bp | GATAAGCTTATCTCTTTGGTAGTCATTAAAAGCGACAGCAATGCATaGGAGCGCTGGCTGGCACAAGAACCACAGGATGCAGCCCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: DKLISLVVIKSDSNA*ERWLAQEPQDAALG Trigger: GCCAAGGGCTGCATCCTGTGGTTCTTGTGCCAGCCAGCGCTCGCATGCATTGCTGTCGCTTTTAATGACTACCAAAGAGATAAGCTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CCA 90 bp | ATCTCTTTGGTAGTCATTAAAAGCGACAGCAATGCATGCGAGCGCTaGCTGGCACAAGAACCACAGGATGCAGCCCTTGGCAAACGTGAT | + |
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Preference number: 5 (lower is better) Translates to: ISLVVIKSDSNACER*LAQEPQDAALGKRD Trigger: ATCACGTTTGCCAAGGGCTGCATCCTGTGGTTCTTGTGCCAGCCAGCGCTCGCATGCATTGCTGTCGCTTTTAATGACTACCAAAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS TCA 90 bp | TCTGAATTTGGGAGGCAATGTCAAAAACTTCTGCCAGGCTTCCTATaGGAGGCACTCCTAGCCCATCTCTGGAGTACCTGGACAAGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SEFGRQCQKLLPGFL*EALLAHLWSTWTSG Trigger: TCCACTTGTCCAGGTACTCCAGAGATGGGCTAGGAGTGCCTCTCATAGGAAGCCTGGCAGAAGTTTTTGACATTGCCTCCCAAATTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR CAA 90 bp | GTTCACTGTTTGAGTTCACTCCGGAGCTTCTATTCCTTTCTGCTGAGCCCGCTGACAGCCACTGCTACGTaGTTGATTCTGACACACAGA | + |
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Preference number: 5 (lower is better) Translates to: VHCLSSLRSFYSFLLSPLTATAT*LILTHR Trigger: TCTGTGTGTCAGAATCAACAACGTAGCAGTGGCTGT...CAGCGGGCTCAGCAGAAAGGAATAGAAGCTCCGGAGTGAACTCAAACAGTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS GCA 90 bp | CTGGGCTTGGAACAGGTAGAGTTTAGCTTCTTTTCCAACAGCCACTaGTACGTTGTTGATTCTGACACACAGAAGAGCATGGTCACCGTG | + |
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Preference number: 5 (lower is better) Translates to: LGLEQVEFSFFSNSH*YVVDSDTQKSMVTV Trigger: CACGGTGACCATGCTCTTCTGTGTGTCAGAATCAACAACGTAGCAGTGGCTGTTGGAAAAGAAGCTAAACTCTACCTGTTCCAAGCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR CAA 90 bp | TTTCATAACTGGGCGAGCTGGGCACGCACAGGCAAGTATTGTCTAGGTGAATACGCCACTGCTACGTTGTaGATTCTGACACACAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: FHNWASWARTGKYCLGEYATATL*ILTHRR Trigger: TCTTCTGTGTGTCAGAATCAACAACGTAGCAGTGGC...GTATTCACCTAGACAATACTTGCCTGTGCGTGCCCAGCTCGCCCAGTTATGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR CAA 90 bp | AGTCACCTTGAAACAACATTCTTTCTGGGAAGTTCACTGTTTGAGTTCACTCCGTGGGACACTGTGAGGTaGTGCTCCGTCTGGGTCACT | + |
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Preference number: 5 (lower is better) Translates to: SHLETTFFLGSSLFEFTPWDTVR*CSVWVT Trigger: AGTGACCCAGACGGAGCACAACCTCACAGTGTCCCA...CGGAGTGAACTCAAACAGTGAACTTCCCAGAAAGAATGTTGTTTCAAGGTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS TCA 90 bp | ACTATTGTCCAGCCCATACACAGGCTCAGAAGCAGGTACAGCATCTaGATTTGGGAGGCAATGTCAAAAACTTCTGCCAGGCTTCCTATG | + |
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Preference number: 5 (lower is better) Translates to: TIVQPIHRLRSRYSI*IWEAMSKTSARLPM Trigger: CATAGGAAGCCTGGCAGAAGTTTTTGACATTGCCTCCCAAATTCAGATGCTGTACCTGCTTCTGAGCCTGTGTATGGGCTGGACAATAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS-3UTR CAA 90 bp | ACGTGTACTCTAAGCAGTCCTTTTCACATTTATTTCCACGTGGAAACTGTTTCACAGCCATTCCTGGGCTaGGAACAGGTAGAGTTTAGC | + |
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Preference number: 5 (lower is better) Translates to: TCTLSSPFHIYFHVETVSQPFLG*EQVEFS Trigger: GCTAAACTCTACCTGTTCCAAGCCCAGGAATGGCTG...TGAAACAGTTTCCACGTGGAAATAAATGTGAAAAGGACTGCTTAGAGTACACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CCA 72 bp | GCGGCGCTGCTGAAGCTGCCACGCAGGGTCTTGCCCTaGCCGCCCTGCGGCCACCAGCAGCTGCACGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: AALLKLPRRVLP*PPCGHQQLHVR Trigger: CCTCACGTGCAGCTGCTGGTGGCCGCAGGGCGGCCAGGGCAAGACCCTGCGTGGCAGCTTCAGCAGCGCCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CCA 72 bp | GCATGGTCACCGTGGAACTCGAAATGGCCGATGCTCTaGCCCTGGGCGTCGCGGGCCGCGGCGCTGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: AWSPWNSKWPML*PWASRAAALLK Trigger: CTTCAGCAGCGCCGCGGCCCGCGACGCCCAGGGCCAGAGCATCGGCCATTTCGAGTTCCACGGTGACCATGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS GCA 72 bp | CTCGGGCTAGCCGCTCACTGCAGCTGTAGCCGGGGCTaGTCTCCAGCAGCTTCAGCCATTCCTGGGCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: LGLAAHCSCSRG*SPAASAIPGLG Trigger: TCCAAGCCCAGGAATGGCTGAAGCTGCTGGAGAGCAGCCCCGGCTACAGCTGCAGTGAGCGGCTAGCCCGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CCA 72 bp | ACTGCGATGCCCGTGGACGCGGGTGTCGAGTCCCACTaGAGCGGTCTGCTCTGCGACTTCTTCATCCGCACT | + |
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Preference number: 6 (lower is better) Translates to: TAMPVDAGVESH*SGLLCDFFIRT Trigger: AGTGCGGATGAAGAAGTCGCAGAGCAGACCGCTCCAGTGGGACTCGACACCCGCGTCCACGGGCATCGCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS TCA 72 bp | CTCGCCATGTCTGGGGAGCGGGCAGCTGGGACACTGTaGGGTTGTGCTCCGTCTGGGTCACTGTCACTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LAMSGERAAGTL*GCAPSGSLSLS Trigger: TGACAGTGACAGTGACCCAGACGGAGCACAACCTCACAGTGTCCCAGCTGCCCGCTCCCCAGACATGGCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS GCA 72 bp | CCGTGGACGCGGGTGTCGAGTCCCACTGGAGCGGTCTaGTCTGCGACTTCTTCATCCGCACTATTGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PWTRVSSPTGAV*SATSSSALLSS Trigger: GCTGGACAATAGTGCGGATGAAGAAGTCGCAGAGCAGACCGCTCCAGTGGGACTCGACACCCGCGTCCACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS TCA 72 bp | CCTCCCCCTGGGGGCTCTCTGAGTCATCCCTGCAGGTaGACTTGTCGGCATAGAACACTCGCCATGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PPPGGSLSHPCR*TCRHRTLAMSG Trigger: CCCAGACATGGCGAGTGTTCTATGCCGACAAGTTCACCTGCAGGGATGACTCAGAGAGCCCCCAGGGGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CCA 72 bp | GTGGAGCCCGGACTCTCTGGCGCTAAAATGATCCAGTaGGTTTCCCTCGGCGTCCGGGTTGAGGAGCACCAT | + |
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Preference number: 6 (lower is better) Translates to: VEPGLSGAKMIQ*VSLGVRVEEHH Trigger: ATGGTGCTCCTCAACCCGGACGCCGAGGGAAACCCACTGGATCATTTTAGCGCCAGAGAGTCCGGGCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS GCA 72 bp | GACGCGGGTGTCGAGTCCCACTGGAGCGGTCTGCTCTaGGACTTCTTCATCCGCACTATTGTCCAGCCCATA | + |
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Preference number: 6 (lower is better) Translates to: DAGVESHWSGLL*DFFIRTIVQPI Trigger: TATGGGCTGGACAATAGTGCGGATGAAGAAGTCGCAGAGCAGACCGCTCCAGTGGGACTCGACACCCGCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CAA 90 bp | GCTGTAGCCGGGGCTGCTCTCCAGCAGCTTCAGCCATTCCTGGGCTaGGAACAGGTAGAGTTTAGCTTCTTTTCCAACAGCCACTGCTAC | + |
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Preference number: 6 (lower is better) Translates to: AVAGAALQQLQPFLG*EQVEFSFFSNSHCY Trigger: GTAGCAGTGGCTGTTGGAAAAGAAGCTAAACTCTACCTGTTCCAAGCCCAGGAATGGCTGAAGCTGCTGGAGAGCAGCCCCGGCTACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CAA 72 bp | GGAGCGGTCTGCTCTGCGACTTCTTCATCCGCACTATaGTCCAGCCCATACACAGGCTCAGAAGCAGGTACA | + |
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Preference number: 6 (lower is better) Translates to: GAVCSATSSSAL*SSPYTGSEAGT Trigger: TGTACCTGCTTCTGAGCCTGTGTATGGGCTGGACAATAGTGCGGATGAAGAAGTCGCAGAGCAGACCGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CAA 90 bp | AGTCCCACTGGAGCGGTCTGCTCTGCGACTTCTTCATCCGCACTATaGTCCAGCCCATACACAGGCTCAGAAGCAGGTACAGCATCTGAA | + |
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Preference number: 6 (lower is better) Translates to: SPTGAVCSATSSSAL*SSPYTGSEAGTASE Trigger: TTCAGATGCTGTACCTGCTTCTGAGCCTGTGTATGGGCTGGACAATAGTGCGGATGAAGAAGTCGCAGAGCAGACCGCTCCAGTGGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS GCA 72 bp | AGATCCGTAAGACAATCAGCAAGAGCCCGGCTAAGCTaGGGTGTGAATGTGCGCTGTGGTGACTGGTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RSVRQSARARLS*GVNVRCGDWCL Trigger: AAGACACCAGTCACCACAGCGCACATTCACACCGCAGCTTAGCCGGGCTCTTGCTGATTGTCTTACGGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CCA 72 bp | CGGCTAAGCTGCGGTGTGAATGTGCGCTGTGGTGACTaGTGTCTTCAAACTGCTCCCAGAGTAGCAAAATGC | + |
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Preference number: 6 (lower is better) Translates to: RLSCGVNVRCGD*CLQTAPRVAKC Trigger: GCATTTTGCTACTCTGGGAGCAGTTTGAAGACACCAGTCACCACAGCGCACATTCACACCGCAGCTTAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CAA 72 bp | GGGGCTGCTCTCCAGCAGCTTCAGCCATTCCTGGGCTaGGAACAGGTAGAGTTTAGCTTCTTTTCCAACAGC | + |
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Preference number: 6 (lower is better) Translates to: GAALQQLQPFLG*EQVEFSFFSNS Trigger: GCTGTTGGAAAAGAAGCTAAACTCTACCTGTTCCAAGCCCAGGAATGGCTGAAGCTGCTGGAGAGCAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS GCA 72 bp | ATCTCTTTGGTAGTCATTAAAAGCGACAGCAATGCATaGGAGCGCTGGCTGGCACAAGAACCACAGGATGCA | + |
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Preference number: 6 (lower is better) Translates to: ISLVVIKSDSNA*ERWLAQEPQDA Trigger: TGCATCCTGTGGTTCTTGTGCCAGCCAGCGCTCGCATGCATTGCTGTCGCTTTTAATGACTACCAAAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS TCA 72 bp | AGGAAAAGTCTGTACAGAATGACCATGGCCACGGCCTaGCACAGGATGACACCTACTGTGATAAGCTTATCT | + |
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Preference number: 6 (lower is better) Translates to: RKSLYRMTMATA*HRMTPTVISLS Trigger: AGATAAGCTTATCACAGTAGGTGTCATCCTGTGTCAGGCCGTGGCCATGGTCATTCTGTACAGACTTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CAA 72 bp | AGTTTAGCTTCTTTTCCAACAGCCACTGCTACGTTGTaGATTCTGACACACAGAAGAGCATGGTCACCGTGG | + |
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Preference number: 6 (lower is better) Translates to: SLASFPTATATL*ILTHRRAWSPW Trigger: CCACGGTGACCATGCTCTTCTGTGTGTCAGAATCAACAACGTAGCAGTGGCTGTTGGAAAAGAAGCTAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS GCA 72 bp | GAACAGGTAGAGTTTAGCTTCTTTTCCAACAGCCACTaGTACGTTGTTGATTCTGACACACAGAAGAGCATG | + |
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Preference number: 6 (lower is better) Translates to: EQVEFSFFSNSH*YVVDSDTQKSM Trigger: CATGCTCTTCTGTGTGTCAGAATCAACAACGTAGCAGTGGCTGTTGGAAAAGAAGCTAAACTCTACCTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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| CDS CAA 72 bp | ACACAGGATGACACCTACTGTGATAAGCTTATCTCTTaGGTAGTCATTAAAAGCGACAGCAATGCATGCGAG | + |
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Preference number: 6 (lower is better) Translates to: TQDDTYCDKLIS*VVIKSDSNACE Trigger: CTCGCATGCATTGCTGTCGCTTTTAATGACTACCAAAGAGATAAGCTTATCACAGTAGGTGTCATCCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022728.4 |
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