Pregenerated sensors for GPR18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050350Ensembl transcript IDs: ENSMUST00000055475.9
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGTGTAGCCTGGACTGGCCTTCCTACGTCTTCCCAGTGTTTGTTTaGATCACAGTCCTGACCACTACACATGGCTCATGCACATGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LCSLDWPSYVFPVFV*ITVLTTTHGSCTCF Trigger: GAAACATGTGCATGAGCCATGTGTAGTGGTCAGGACTGTGATCCAAACAAACACTGGGAAGACGTAGGAAGGCCAGTCCAGGCTACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTCACTGTGTAGCCTGGACTGGCCTTCCTACGTCTTCCCAGTGTTTGTTTCCTGACCACTACACATaGCTCATGCACATGTTTCGT | + |
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Preference number: 2 (lower is better) Translates to: EFHCVAWTGLPTSSQCLFPDHYT*LMHMFR Trigger: ACGAAACATGTGCATGAGCCATGTGTAGTGGTCAGG...AAACAAACACTGGGAAGACGTAGGAAGGCCAGTCCAGGCTACACAGTGAAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| 3UTR CAA 90 bp | CAGAATACCGCAGAAGTTTTTAAAGTTCATCATTATTATTTCTCTTaGTTAGAGAAGGGACTGGATAGTGTAGAATGCTGGTTCACCCGA | + |
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Preference number: 2 (lower is better) Translates to: QNTAEVFKVHHYYFS*LEKGLDSVECWFTR Trigger: TCGGGTGAACCAGCATTCTACACTATCCAGTCCCTTCTCTAACAAAGAGAAATAATAATGATGAACTTTAAAAACTTCTGCGGTATTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| 3UTR CCA 72 bp | AGTGTTTGTTTGGATCACAGTCCTGACCACTACACATaGCTCATGCACATGTTTCGTACAAGTTGTCAGATA | + |
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Preference number: 3 (lower is better) Translates to: SVCLDHSPDHYT*LMHMFRTSCQI Trigger: TATCTGACAACTTGTACGAAACATGTGCATGAGCCATGTGTAGTGGTCAGGACTGTGATCCAAACAAACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CCA 90 bp | GAGTTTCACTGTGTAGCCTGGACTGGCCTTCCTACGTCTTCCCAGTGTTTGTTTGCAGGGGGACAGTGGTaGTCAGGGTCATTACCCAGA | + |
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Preference number: 4 (lower is better) Translates to: EFHCVAWTGLPTSSQCLFAGGQW*SGSLPR Trigger: TCTGGGTAATGACCCTGACCACCACTGTCCCCCTGC...AAACAAACACTGGGAAGACGTAGGAAGGCCAGTCCAGGCTACACAGTGAAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| 3UTR CAA 72 bp | CCTGGACTGGCCTTCCTACGTCTTCCCAGTGTTTGTTaGGATCACAGTCCTGACCACTACACATGGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: PGLAFLRLPSVC*DHSPDHYTWLM Trigger: CATGAGCCATGTGTAGTGGTCAGGACTGTGATCCAAACAAACACTGGGAAGACGTAGGAAGGCCAGTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR GCA 90 bp | GAGTTTCACTGTGTAGCCTGGACTGGCCTTCCTACGTCTTCCCAGTGTTTGTTTAAGCAGACGAGCACCTaGAGCAGGAGGGTCATGATG | + |
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Preference number: 4 (lower is better) Translates to: EFHCVAWTGLPTSSQCLFKQTST*SRRVMM Trigger: CATCATGACCCTCCTGCTGCAGGTGCTCGTCTGCTT...AAACAAACACTGGGAAGACGTAGGAAGGCCAGTCCAGGCTACACAGTGAAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CCA 90 bp | TGGCCTTCCTACGTCTTCCCAGTGTTTGTTTGGATCACAGTCCTGACCACTACAACGGCAAAGCAGATGTaGAAGGGCACGAAGCAGACG | + |
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Preference number: 4 (lower is better) Translates to: WPSYVFPVFVWITVLTTTTAKQM*KGTKQT Trigger: CGTCTGCTTCGTGCCCTTCCACATCTGCTTTGCCGT...TGTAGTGGTCAGGACTGTGATCCAAACAAACACTGGGAAGACGTAGGAAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR GCA 90 bp | GAGTTTCACTGTGTAGCCTGGACTGGCCTTCCTACGTCTTCCCAGTGTTTGTTTGCCCAATCAGGAAGATaGAGCTGTAGAAGACTAGGG | + |
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Preference number: 4 (lower is better) Translates to: EFHCVAWTGLPTSSQCLFAQSGR*SCRRLG Trigger: CCCTAGTCTTCTACAGCTGCATCTTCCTGATTGGGC...AAACAAACACTGGGAAGACGTAGGAAGGCCAGTCCAGGCTACACAGTGAAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CCA 90 bp | GACAGAGTTTCACTGTGTAGCCTGGACTGGCCTTCCTACGTCTTCCCAGTGTTTAGGGCCCCAAGAATGTaGCAGAAGTACTCTCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: DRVSLCSLDWPSYVFPVFRAPRM*QKYSPN Trigger: ATTTGGAGAGTACTTCTGCCACATTCTTGGGGCCCT...AAACACTGGGAAGACGTAGGAAGGCCAGTCCAGGCTACACAGTGAAACTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CCA 90 bp | GTTTCACTGTGTAGCCTGGACTGGCCTTCCTACGTCTTCCCAGTGTTTGTTTGGGAGCCTGGAACTGTTTaGAAACGATGTAGTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: VSLCSLDWPSYVFPVFVWEPGTV*KRCSRG Trigger: TCCTCTACTACATCGTTTCCAAACAGTTCCAGGCTC...CCAAACAAACACTGGGAAGACGTAGGAAGGCCAGTCCAGGCTACACAGTGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CCA 90 bp | GACAGAGTTTCACTGTGTAGCCTGGACTGGCCTTCCTACGTCTTCCCAGTGTTTTGTAGATGGTCACTGTaGTTCTTTTCTTGGTCGTAC | + |
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Preference number: 4 (lower is better) Translates to: DRVSLCSLDWPSYVFPVFCRWSL*FFSWSY Trigger: GTACGACCAAGAAAAGAACCACAGTGACCATCTACA...AAACACTGGGAAGACGTAGGAAGGCCAGTCCAGGCTACACAGTGAAACTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CCA 90 bp | TGGCCTTCCTACGTCTTCCCAGTGTTTGTTTGGATCACAGTCCTGACCACTACAATTTTGGCTGTACGATaGCCATGTATCTGTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: WPSYVFPVFVWITVLTTTILAVR*PCICQH Trigger: GTGCTGACAGATACATGGCCATCGTACAGCCAAAAT...TGTAGTGGTCAGGACTGTGATCCAAACAAACACTGGGAAGACGTAGGAAGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CCA 90 bp | TATCAGAATACTCAGTTTTTAATCATGTGGCTAGAATACACAGAATACCGCAGACTTCAGGCAGGTGGCTaGGGAGGAGGCCTTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: YQNTQFLIMWLEYTEYRRLQAGG*GGGLVW Trigger: CCAGACAAGGCCTCCTCCCCAGCCACCTGCCTGAAG...TCTGCGGTATTCTGTGTATTCTAGCCACATGATTAAAAACTGAGTATTCTGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CCA 90 bp | TCAGAATACTCAGTTTTTAATCATGTGGCTAGAATACACAGAATACCGCAGAAGGTAGCAGGGGGACAGTaGTGGTCAGGGTCATTACCC | + |
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Preference number: 4 (lower is better) Translates to: SEYSVFNHVARIHRIPQKVAGGQ*WSGSLP Trigger: GGGTAATGACCCTGACCACCACTGTCCCCCTGCTAC...CTTCTGCGGTATTCTGTGTATTCTAGCCACATGATTAAAAACTGAGTATTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CCA 90 bp | AGCATATCAGAATACTCAGTTTTTAATCATGTGGCTAGAATACACAGAATACCGCCACAGAGCGAGGCTTaGGTAAAACACCACCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SISEYSVFNHVARIHRIPPQSEA*VKHHQG Trigger: GCCCTGGTGGTGTTTTACCCAAGCCTCGCTCTGTGG...CGGTATTCTGTGTATTCTAGCCACATGATTAAAAACTGAGTATTCTGATATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CCA 90 bp | TCAGAATACTCAGTTTTTAATCATGTGGCTAGAATACACAGAATACCGCAGAAGGAAGTACTCTCCAAATaGCCACTCGCCTTTTGCATA | + |
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Preference number: 4 (lower is better) Translates to: SEYSVFNHVARIHRIPQKEVLSK*PLAFCI Trigger: TATGCAAAAGGCGAGTGGCCATTTGGAGAGTACTTC...CTTCTGCGGTATTCTGTGTATTCTAGCCACATGATTAAAAACTGAGTATTCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CCA 90 bp | TATCAGAATACTCAGTTTTTAATCATGTGGCTAGAATACACAGAATACCGCAGACTCCTTGGCATATTTTaGCTGTACGATGGCCATGTA | + |
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Preference number: 4 (lower is better) Translates to: YQNTQFLIMWLEYTEYRRLLGIF*LYDGHV Trigger: TACATGGCCATCGTACAGCCAAAATATGCCAAGGAG...TCTGCGGTATTCTGTGTATTCTAGCCACATGATTAAAAACTGAGTATTCTGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CCA 90 bp | AGCATATCAGAATACTCAGTTTTTAATCATGTGGCTAGAATACACAGAATACCGCGTTCATCATGTAGATaGTCACTGTGGTTCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SISEYSVFNHVARIHRIPRSSCR*SLWFFS Trigger: AGAAAAGAACCACAGTGACCATCTACATGATGAACG...CGGTATTCTGTGTATTCTAGCCACATGATTAAAAACTGAGTATTCTGATATGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS CCA 90 bp | CGCAAGCACGGCCTTGCCGGTGTTCTTCAGCTCCTTGGCATATTTTaGCTGTACGATGGCCATGTATCTGTCAGCACTAATGAAAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: RKHGLAGVLQLLGIF*LYDGHVSVSTNESK Trigger: CTTGCTTTCATTAGTGCTGACAGATACATGGCCATCGTACAGCCAAAATATGCCAAGGAGCTGAAGAACACCGGCAAGGCCGTGCTTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CAA 90 bp | GACAGAGTTTCACTGTGTAGCCTGGACTGGCCTTCCTACGTCTTCCCAGTGTTTGTGTTCTTCAGCTCCTaGGCATATTTTGGCTGTACG | + |
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Preference number: 5 (lower is better) Translates to: DRVSLCSLDWPSYVFPVFVFFSS*AYFGCT Trigger: CGTACAGCCAAAATATGCCAAGGAGCTGAAGAACAC...AAACACTGGGAAGACGTAGGAAGGCCAGTCCAGGCTACACAGTGAAACTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS GCA 90 bp | CCCAAGAATGTGGCAGAAGTACTCTCCAAATGGCCACTCGCCTTTTaGATAGTAAAACATCCGAAAGGGCAGACTGAGTATAAATACGAG | + |
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Preference number: 5 (lower is better) Translates to: PKNVAEVLSKWPLAF*IVKHPKGQTEYKYE Trigger: CTCGTATTTATACTCAGTCTGCCCTTTCGGATGTTTTACTATGCAAAAGGCGAGTGGCCATTTGGAGAGTACTTCTGCCACATTCTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CAA 90 bp | TCAGAATACTCAGTTTTTAATCATGTGGCTAGAATACACAGAATACCGCAGAAGGACTTCTCCTTGACCTaGGGCTTCAGCTTAGACGTC | + |
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Preference number: 5 (lower is better) Translates to: SEYSVFNHVARIHRIPQKDFSLT*GFSLDV Trigger: GACGTCTAAGCTGAAGCCCAAGGTCAAGGAGAAGTC...CTTCTGCGGTATTCTGTGTATTCTAGCCACATGATTAAAAACTGAGTATTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS-3UTR CAA 90 bp | TCAGAATACTCAGTTTTTAATCATGTGGCTAGAATACACAGAATACCGCAGAAGGCTCCTTGGCATATTTaGGCTGTACGATGGCCATGT | + |
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Preference number: 5 (lower is better) Translates to: SEYSVFNHVARIHRIPQKAPWHI*AVRWPC Trigger: ACATGGCCATCGTACAGCCAAAATATGCCAAGGAGC...CTTCTGCGGTATTCTGTGTATTCTAGCCACATGATTAAAAACTGAGTATTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS CCA 72 bp | TCCTGTCCTTGTAGCATCAGGACGGCAAAGCAGATGTaGAAGGGCACGAAGCAGACGAGCACCTGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SCPCSIRTAKQM*KGTKQTSTCSR Trigger: CCTGCTGCAGGTGCTCGTCTGCTTCGTGCCCTTCCACATCTGCTTTGCCGTCCTGATGCTACAAGGACAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS CAA 90 bp | AGCACCTGCAGCAGGAGGGTCATGATGATCCGTATGGACTTCTCCTaGACCTTGGGCTTCAGCTTAGACGTCTGCCCTCGGAGGAGACTG | + |
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Preference number: 6 (lower is better) Translates to: STCSRRVMMIRMDFS*TLGFSLDVCPRRRL Trigger: CAGTCTCCTCCGAGGGCAGACGTCTAAGCTGAAGCCCAAGGTCAAGGAGAAGTCCATACGGATCATCATGACCCTCCTGCTGCAGGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS CAA 72 bp | AGCAGGAGGGTCATGATGATCCGTATGGACTTCTCCTaGACCTTGGGCTTCAGCTTAGACGTCTGCCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SRRVMMIRMDFS*TLGFSLDVCPR Trigger: CCGAGGGCAGACGTCTAAGCTGAAGCCCAAGGTCAAGGAGAAGTCCATACGGATCATCATGACCCTCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS CCA 72 bp | AGTCGCGTGAAGTTGAGCACGTTGACAGCTTTTAAGTaGGTGATGTCGGAGATCTTCAGGCAGGTGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SRVKLSTLTAFK*VMSEIFRQVAG Trigger: CCCAGCCACCTGCCTGAAGATCTCCGACATCACCCACTTAAAAGCTGTCAACGTGCTCAACTTCACGCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS CAA 72 bp | CACGCAAGCACGGCCTTGCCGGTGTTCTTCAGCTCCTaGGCATATTTTGGCTGTACGATGGCCATGTATCTG | + |
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Preference number: 6 (lower is better) Translates to: HASTALPVFFSS*AYFGCTMAMYL Trigger: CAGATACATGGCCATCGTACAGCCAAAATATGCCAAGGAGCTGAAGAACACCGGCAAGGCCGTGCTTGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS CCA 72 bp | ACGCAAGCACGGCCTTGCCGGTGTTCTTCAGCTCCTTaGCATATTTTGGCTGTACGATGGCCATGTATCTGT | + |
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Preference number: 6 (lower is better) Translates to: TQARPCRCSSAP*HILAVRWPCIC Trigger: ACAGATACATGGCCATCGTACAGCCAAAATATGCCAAGGAGCTGAAGAACACCGGCAAGGCCGTGCTTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS GCA 72 bp | GTGGCAGAAGTACTCTCCAAATGGCCACTCGCCTTTTaGATAGTAAAACATCCGAAAGGGCAGACTGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: VAEVLSKWPLAF*IVKHPKGQTEY Trigger: ATACTCAGTCTGCCCTTTCGGATGTTTTACTATGCAAAAGGCGAGTGGCCATTTGGAGAGTACTTCTGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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| CDS CAA 90 bp | ATGATGAACAAAGGGATCAGGAAGAAAAATATGAGTCGCGTGAAGTaGAGCACGTTGACAGCTTTTAAGTGGGTGATGTCGGAGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: MMNKGIRKKNMSRVK*STLTAFKWVMSEIF Trigger: GAAGATCTCCGACATCACCCACTTAAAAGCTGTCAACGTGCTCAACTTCACGCGACTCATATTTTTCTTCCTGATCCCTTTGTTCATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055475.9 |
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