RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR179 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070337

Ensembl transcript IDs: ENSMUST00000093942.5

Found 518 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTAAACTGATTGTGGAGAGGAGAGCCAAGCTGCGGGTGGACGGCTaGGAAAGAGGCTTTGTACTCACGAGGTGCCTTTCCCGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: PKLIVERRAKLRVDG*ERGFVLTRCLSRPW
Trigger: CCAGGGCCGGGAAAGGCACCTCGTGAGTACAAAGCCTCTTTCTCAGCCGTCCACCCGCAGCTTGGCTCTCCTCTCCACAATCAGTTTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR GCA 90 bp CCGTTGTCTTTAATGCCCCTGCCTGCTGGCTCTGCCACATTAGCCTaGTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTG +
Preference number: 1 (lower is better)
Translates to: PLSLMPLPAGSATLA*LSSPPSPSLKLEPL
Trigger: CAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAATGTGGCAGAGCCAGCAGGCAGGGGCATTAAAGACAACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CCA 90 bp GGGCCACTGGCCCCCAAAGGAGACCAGGCGACTCTCTTTCAGAAGTaGAGCATTCGGTTGCTTTTCTCTGAGGCTCTGAGTCTGTTCAGC +
Preference number: 1 (lower is better)
Translates to: GPLAPKGDQATLFQK*SIRLLFSEALSLFS
Trigger: GCTGAACAGACTCAGAGCCTCAGAGAAAAGCAACCGAATGCTCCACTTCTGAAAGAGAGTCGCCTGGTCTCCTTTGGGGGCCAGTGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 90 bp CACCAACCCTGTCATCTCGCACTGCTTAAGCAAGGTGGCCTAAACTaGTTGTGGAGAGGAGAGCCAAGCTGCGGGTGGACGGCTGAGAAA +
Preference number: 1 (lower is better)
Translates to: HQPCHLALLKQGGLN*LWRGEPSCGWTAEK
Trigger: TTTCTCAGCCGTCCACCCGCAGCTTGGCTCTCCTCTCCACAATCAGTTTAGGCCACCTTGCTTAAGCAGTGCGAGATGACAGGGTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR GCA 90 bp GGTGGGACTTACACCGTTGTCTTTAATGCCCCTGCCTGCTGGCTCTaGCACATTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAA +
Preference number: 1 (lower is better)
Translates to: GGTYTVVFNAPACWL*HISLLVFTPISLSQ
Trigger: TTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAATGTGGCAGAGCCAGCAGGCAGGGGCATTAAAGACAACGGTGTAAGTCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 90 bp CCTGGAGACATCGGGAAGAACACCTTGTCCAGTGTGGGAGGGCCCTaGGAGAGCGTCTCTCCTTCTCTGTTCTCTGTTGTCACTTTGGAT +
Preference number: 1 (lower is better)
Translates to: PGDIGKNTLSSVGGP*ESVSPSLFSVVTLD
Trigger: ATCCAAAGTGACAACAGAGAACAGAGAAGGAGAGACGCTCTCTCAGGGCCCTCCCACACTGGACAAGGTGTTCTTCCCGATGTCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 90 bp GCCCTGGGGAGCGCTACTCTTTCTGATAGTGGTTGGGATTCGGATTaGACAGGCCCTCTATTCTTTCCCAGGCTCCTCTGGGAAGAGATC +
Preference number: 1 (lower is better)
Translates to: ALGSATLSDSGWDSD*TGPLFFPRLLWEEI
Trigger: GATCTCTTCCCAGAGGAGCCTGGGAAAGAATAGAGGGCCTGTTCAATCCGAATCCCAACCACTATCAGAAAGAGTAGCGCTCCCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 90 bp TCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGTCCTaGAGGAGTTCTGACCCCCACCAGGGTGCTGTCATTCACAGTCCC +
Preference number: 1 (lower is better)
Translates to: SLSQLFGNTGTQEVS*RSSDPHQGAVIHSP
Trigger: GGGACTGTGAATGACAGCACCCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 90 bp GTTGCCATCTGGCCTCCTGGGCCCAGGAAGTACCCAAGCTATCTTTaGGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGTCCTGAA +
Preference number: 1 (lower is better)
Translates to: VAIWPPGPRKYPSYL*VSSLGTLEHRKCPE
Trigger: TTCAGGACACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTACTTCCTGGGCCCAGGAGGCCAGATGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CCA 90 bp TGTTTCCTGAAGCAGGGAGAGAAGTGGGGAGAACAGAATGTCCCCTaGGCTCCAACCCTTCTTCTACAGTTCCTTCTGAATGGGTTGCCA +
Preference number: 1 (lower is better)
Translates to: CFLKQGEKWGEQNVP*APTLLLQFLLNGLP
Trigger: TGGCAACCCATTCAGAAGGAACTGTAGAAGAAGGGTTGGAGCCCAGGGGACATTCTGTTCTCCCCACTTCTCTCCCTGCTTCAGGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 90 bp GAGCAGCATGCGCTCTCAATCACAGAGCCATCTCATCTTTCATCCTaGACTACATGGCCTTATAGCCTTCTCTTGCCCACAGTCCCCAGT +
Preference number: 1 (lower is better)
Translates to: EQHALSITEPSHLSS*TTWPYSLLLPTVPS
Trigger: ACTGGGGACTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATGGCTCTGTGATTGAGAGCGCATGCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR GCA 90 bp TCTTGGCCGTTGAGATCCAAACCTGGGTCCTGTGCAAGAGCAGCATaGGCTCTCAATCACAGAGCCATCTCATCTTTCATCCTGAACTAC +
Preference number: 1 (lower is better)
Translates to: SWPLRSKPGSCARAA*ALNHRAISSFILNY
Trigger: GTAGTTCAGGATGAAAGATGAGATGGCTCTGTGATTGAGAGCGCATGCTGCTCTTGCACAGGACCCAGGTTTGGATCTCAACGGCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 90 bp CTCTCTTTCAGAAGTGGAGCATTCGGTTGCTTTTCTCTGAGGCTCTaGGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCCCAC +
Preference number: 1 (lower is better)
Translates to: LSFRSGAFGCFSLRL*VCSAILHVDSWFSH
Trigger: GTGGGAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAAAAGCAACCGAATGCTCCACTTCTGAAAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 90 bp AGAGTGTCTGACTGTTGCTACGTCAGCCAACGGTCAGGGTACACATaGGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACAC +
Preference number: 1 (lower is better)
Translates to: RVSDCCYVSQRSGYT*EVVKQKRKSQVKRH
Trigger: GTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCATGTGTACCCTGACCGTTGGCTGACGTAGCAACAGTCAGACACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 90 bp CAGGCCCTCTATTCTTTCCCAGGCTCCTCTGGGAAGAGATCTGAGTaGGTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTT +
Preference number: 1 (lower is better)
Translates to: QALYSFPGSSGKRSE*VRVKFLLENQRFLL
Trigger: AAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAACTCACTCAGATCTCTTCCCAGAGGAGCCTGGGAAAGAATAGAGGGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR GCA 90 bp CAGGCTCCTCTGGGAAGAGATCTGAGTGAGTTAGAGTCAAGTTCTTaGTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACATTTACT +
Preference number: 1 (lower is better)
Translates to: QAPLGRDLSELESSS*LRTRDSSLAPVTFT
Trigger: AGTAAATGTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAACTCACTCAGATCTCTTCCCAGAGGAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CCA 90 bp TTTTGTGTGTATATGTGTGTGTGTCTCTCTATATGTCTGTCTCTGTaGGGATATGTGCACATGAGTGTAGGTAGCCTCAGAGACCAGGAG +
Preference number: 1 (lower is better)
Translates to: FCVYMCVCLSICLSL*GYVHMSVGSLRDQE
Trigger: CTCCTGGTCTCTGAGGCTACCTACACTCATGTGCACATATCCCCACAGAGACAGACATATAGAGAGACACACACACATATACACACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CCA 90 bp TACTCCCTTAAGTGCTCTAGTTGTTTTGCTACCTTGGGTAAACTTTaGGAGAATTCCAGTTTGAACAGCTGTGTAGGGTACTCTGGACGA +
Preference number: 1 (lower is better)
Translates to: YSLKCSSCFATLGKL*ENSSLNSCVGYSGR
Trigger: TCGTCCAGAGTACCCTACACAGCTGTTCAAACTGGAATTCTCCCAAAGTTTACCCAAGGTAGCAAAACAACTAGAGCACTTAAGGGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CAA 90 bp TGGAGAGGAGAGCCAAGCTGCGGGTGGACGGCTGAGAAAGAGGCTTaGTACTCACGAGGTGCCTTTCCCGGCCCTGGGGAGCGCTACTCT +
Preference number: 2 (lower is better)
Translates to: WRGEPSCGWTAEKEA*YSRGAFPGPGERYS
Trigger: AGAGTAGCGCTCCCCAGGGCCGGGAAAGGCACCTCGTGAGTACAAAGCCTCTTTCTCAGCCGTCCACCCGCAGCTTGGCTCTCCTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR GCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACCCCACAGTCCCCAGTTaGTACTCCCTTAAGTGCTCT +
Preference number: 2 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDPTVPS*YSLKCS
Trigger: AGAGCACTTAAGGGAGTAGCAACTGGGGACTGTGGG...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CCA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGACTGGACCCCAGGAAGTaGAGGCAGGAGGACCGGAAG +
Preference number: 2 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERLDPRK*RQEDRK
Trigger: CTTCCGGTCCTCCTGCCTCCACTTCCTGGGGTCCAG...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTGAATGGGTTGCCATCTaGCCTCCTGGGCCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: PLPKLESQVVISRFVLAVEWVAI*PPGPRK
Trigger: CTTCCTGGGCCCAGGAGGCCAGATGGCAACCCATTC...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CAA 90 bp GTCCCCTGGGCTCCAACCCTTCTTCTACAGTTCCTTCTGAATGGGTaGCCATCTGGCCTCCTGGGCCCAGGAAGTACCCAAGCTATCTTT +
Preference number: 2 (lower is better)
Translates to: VPWAPTLLLQFLLNG*PSGLLGPGSTQAIF
Trigger: AAAGATAGCTTGGGTACTTCCTGGGCCCAGGAGGCCAGATGGCAACCCATTCAGAAGGAACTGTAGAAGAAGGGTTGGAGCCCAGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CCA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCACACCTTGTCCAGTGTaGGAGGGCCCTGAGAGAGCG +
Preference number: 2 (lower is better)
Translates to: FSEALSLFSDFACGLLVLTPCPV*EGPERA
Trigger: CGCTCTCTCAGGGCCCTCCCACACTGGACAAGGTGT...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR TCA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGGTCCTGAAGGAGTTCTaGCCCCCACCAGGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: MRSSEAETEESGQKTRPLVLKEF*PPPGCC
Trigger: ACAGCACCCTGGTGGGGGTCAGAACTCCTTCAGGAC...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CCA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGAACCTTGGGTAAACTTTaGGAGAATTCCAGTTTGAAC +
Preference number: 2 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRTLGKL*ENSSLN
Trigger: GTTCAAACTGGAATTCTCCCAAAGTTTACCCAAGGT...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CCA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTTGCCATCTGGCCTCCTaGGCCCAGGAAGTACCCAAG +
Preference number: 2 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSCHLAS*AQEVPK
Trigger: CTTGGGTACTTCCTGGGCCCAGGAGGCCAGATGGCA...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CAA 90 bp CCCAAAGGAGACCAGGCGACTCTCTTTCAGAAGTGGAGCATTCGGTaGCTTTTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGT +
Preference number: 2 (lower is better)
Translates to: PKGDQATLFQKWSIR*LFSEALSLFSDFAC
Trigger: ACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAAAAGCAACCGAATGCTCCACTTCTGAAAGAGAGTCGCCTGGTCTCCTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR GCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGCTTATAGCCTTCTCTTaGCCACAGTCCCCAGTTGCT +
Preference number: 2 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFELIAFS*PQSPVA
Trigger: AGCAACTGGGGACTGTGGGCAAGAGAAGGCTATAAG...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR GCA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCGTTCAGGTGACAGAGTaGTTGCCTAGCACACAGGAA +
Preference number: 2 (lower is better)
Translates to: FSEALSLFSDFACGLLVLVQVTE*LPSTQE
Trigger: TTCCTGTGTGCTAGGCAAGCACTCTGTCACCTGAAC...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CCA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGGTTGAGATCCAAACCTaGGTCCTGTGCAAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: MRSSEAETEESGQKTRPLVEIQT*VLCKSS
Trigger: GCTGCTCTTGCACAGGACCCAGGTTTGGATCTCAAC...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR TCA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGCTAGTTTCTGTTTCCTaGAGCAGGGAGAGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: MRSSEAETEESGQKTRPLLVSVS*SRERSG
Trigger: CCCACTTCTCTCCCTGCTTCAGGAAACAGAAACTAG...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR TCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTTCTCATCTTTCATCCTaGACTACATGGCCTTATAGC +
Preference number: 2 (lower is better)
Translates to: PLPKLESQVVISRFVLAVSHLSS*TTWPYS
Trigger: GCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGA...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR TCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATGGGAAGAGATCTGAGTaGGTTAGAGTCAAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYGKRSE*VRVKFL
Trigger: CAAGAACTTGACTCTAACTCACTCAGATCTCTTCCC...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CAA 90 bp GTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTaGGTCTCATTTGAGGTTTTCTACCTCTTAAACAGCACCTGTATC +
Preference number: 2 (lower is better)
Translates to: VQRFCMWTPGSPTRH*VSFEVFYLLNSTCI
Trigger: GATACAGGTGCTGTTTAAGAGGTAGAAAACCTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCGCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CCA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGATATGTCTGTCTCTGTaGGGATATGTGCACATGAGT +
Preference number: 2 (lower is better)
Translates to: MRSSEAETEESGQKTRPLICLSL*GYVHMS
Trigger: ACTCATGTGCACATATCCCCACAGAGACAGACATAT...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CAA 90 bp GCTCCTCTGGGAAGAGATCTGAGTGAGTTAGAGTCAAGTTCTTGCTaGAGAACCAGAGATTCCTCCTTGGCACCAGTTACATTTACTAAA +
Preference number: 2 (lower is better)
Translates to: APLGRDLSELESSSC*RTRDSSLAPVTFTK
Trigger: TTTAGTAAATGTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAACTCACTCAGATCTCTTCCCAGAGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACGGTACTCTGGACGAATaGCAGAACTCTTTAGAAGAT +
Preference number: 2 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYGTLDE*QNSLED
Trigger: ATCTTCTAAAGAGTTCTGCCATTCGTCCAGAGTACC...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 72 bp ATTGTGGAGAGGAGAGCCAAGCTGCGGGTGGACGGCTaGGAAAGAGGCTTTGTACTCACGAGGTGCCTTTCC +
Preference number: 3 (lower is better)
Translates to: IVERRAKLRVDG*ERGFVLTRCLS
Trigger: GGAAAGGCACCTCGTGAGTACAAAGCCTCTTTCTCAGCCGTCCACCCGCAGCTTGGCTCTCCTCTCCACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR GCA 72 bp TTAATGCCCCTGCCTGCTGGCTCTGCCACATTAGCCTaGTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTG +
Preference number: 3 (lower is better)
Translates to: LMPLPAGSATLA*LSSPPSPSLKL
Trigger: CAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAATGTGGCAGAGCCAGCAGGCAGGGGCATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CCA 72 bp TTCCTGGAGACATCGGGAAGAACACCTTGTCCAGTGTaGGAGGGCCCTGAGAGAGCGTCTCTCCTTCTCTGT +
Preference number: 3 (lower is better)
Translates to: FLETSGRTPCPV*EGPERASLLLC
Trigger: ACAGAGAAGGAGAGACGCTCTCTCAGGGCCCTCCCACACTGGACAAGGTGTTCTTCCCGATGTCTCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 72 bp ATCGGGAAGAACACCTTGTCCAGTGTGGGAGGGCCCTaGGAGAGCGTCTCTCCTTCTCTGTTCTCTGTTGTC +
Preference number: 3 (lower is better)
Translates to: IGKNTLSSVGGP*ESVSPSLFSVV
Trigger: GACAACAGAGAACAGAGAAGGAGAGACGCTCTCTCAGGGCCCTCCCACACTGGACAAGGTGTTCTTCCCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 72 bp TGTCATCTCGCACTGCTTAAGCAAGGTGGCCTAAACTaGTTGTGGAGAGGAGAGCCAAGCTGCGGGTGGACG +
Preference number: 3 (lower is better)
Translates to: CHLALLKQGGLN*LWRGEPSCGWT
Trigger: CGTCCACCCGCAGCTTGGCTCTCCTCTCCACAATCAGTTTAGGCCACCTTGCTTAAGCAGTGCGAGATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR GCA 72 bp GGTGGGACTTACACCGTTGTCTTTAATGCCCCTGCCTaGTGGCTCTGCCACATTAGCCTGCTTGTCTTCACC +
Preference number: 3 (lower is better)
Translates to: GGTYTVVFNAPA*WLCHISLLVFT
Trigger: GGTGAAGACAAGCAGGCTAATGTGGCAGAGCCAGCAGGCAGGGGCATTAAAGACAACGGTGTAAGTCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CCA 72 bp AGAGGCTTTGTACTCACGAGGTGCCTTTCCCGGCCCTaGGGAGCGCTACTCTTTCTGATAGTGGTTGGGATT +
Preference number: 3 (lower is better)
Translates to: RGFVLTRCLSRP*GALLFLIVVGI
Trigger: AATCCCAACCACTATCAGAAAGAGTAGCGCTCCCCAGGGCCGGGAAAGGCACCTCGTGAGTACAAAGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 72 bp GAACACTGGAACACAGGAAGTGTCCTGAAGGAGTTCTaGCCCCCACCAGGGTGCTGTCATTCACAGTCCCAA +
Preference number: 3 (lower is better)
Translates to: EHWNTGSVLKEF*PPPGCCHSQSQ
Trigger: TTGGGACTGTGAATGACAGCACCCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 72 bp CAGCTCTTTGGGAACACTGGAACACAGGAAGTGTCCTaGAGGAGTTCTGACCCCCACCAGGGTGCTGTCATT +
Preference number: 3 (lower is better)
Translates to: QLFGNTGTQEVS*RSSDPHQGAVI
Trigger: AATGACAGCACCCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CCA 72 bp GCCCCCAAAGGAGACCAGGCGACTCTCTTTCAGAAGTaGAGCATTCGGTTGCTTTTCTCTGAGGCTCTGAGT +
Preference number: 3 (lower is better)
Translates to: APKGDQATLFQK*SIRLLFSEALS
Trigger: ACTCAGAGCCTCAGAGAAAAGCAACCGAATGCTCCACTTCTGAAAGAGAGTCGCCTGGTCTCCTTTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CAA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGAGATTTGTCTTGGCCGTaGAGATCCAAACCTGGGTCC +
Preference number: 3 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERDLSWP*RSKPGS
Trigger: GGACCCAGGTTTGGATCTCAACGGCCAAGACAAATC...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR GCA 72 bp CAAAGGCTGGCTGGGGATGTAGTTCAGGTGACAGAGTaGTTGCCTAGCACACAGGAAGTTTACTCTATGGCC +
Preference number: 3 (lower is better)
Translates to: QRLAGDVVQVTE*LPSTQEVYSMA
Trigger: GGCCATAGAGTAAACTTCCTGTGTGCTAGGCAAGCACTCTGTCACCTGAACTACATCCCCAGCCAGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CCA 72 bp CCTTCTTCTACAGTTCCTTCTGAATGGGTTGCCATCTaGCCTCCTGGGCCCAGGAAGTACCCAAGCTATCTT +
Preference number: 3 (lower is better)
Translates to: PSSTVPSEWVAI*PPGPRKYPSYL
Trigger: AAGATAGCTTGGGTACTTCCTGGGCCCAGGAGGCCAGATGGCAACCCATTCAGAAGGAACTGTAGAAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CAA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGATGGGAGAATTCCAGTTaGAACAGCTGTGTAGGGTAC +
Preference number: 3 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERWENSS*NSCVGY
Trigger: GTACCCTACACAGCTGTTCAAACTGGAATTCTCCCA...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 72 bp GACTGTTGCTACGTCAGCCAACGGTCAGGGTACACATaGGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTC +
Preference number: 3 (lower is better)
Translates to: DCCYVSQRSGYT*EVVKQKRKSQV
Trigger: GACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCATGTGTACCCTGACCGTTGGCTGACGTAGCAACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 72 bp AGCGCTACTCTTTCTGATAGTGGTTGGGATTCGGATTaGACAGGCCCTCTATTCTTTCCCAGGCTCCTCTGG +
Preference number: 3 (lower is better)
Translates to: SATLSDSGWDSD*TGPLFFPRLLW
Trigger: CCAGAGGAGCCTGGGAAAGAATAGAGGGCCTGTTCAATCCGAATCCCAACCACTATCAGAAAGAGTAGCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CCA 72 bp ATAAGCCGATTTGTCTTGGCCGTTGAGATCCAAACCTaGGTCCTGTGCAAGAGCAGCATGCGCTCTCAATCA +
Preference number: 3 (lower is better)
Translates to: ISRFVLAVEIQT*VLCKSSMRSQS
Trigger: TGATTGAGAGCGCATGCTGCTCTTGCACAGGACCCAGGTTTGGATCTCAACGGCCAAGACAAATCGGCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CAA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATGTACCCAAGCTATCTTaGAGTCAGCTCTTTGGGAAC +
Preference number: 3 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYVPKLS*SQLFGN
Trigger: GTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CAA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATTGGTTGGGATTCGGATaGAACAGGCCCTCTATTCTT +
Preference number: 3 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYWLGFG*NRPSIL
Trigger: AAGAATAGAGGGCCTGTTCAATCCGAATCCCAACCA...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 72 bp AGAAGTGGAGCATTCGGTTGCTTTTCTCTGAGGCTCTaGGTCTGTTCAGCGATTTTGCATGTGGACTCCTGG +
Preference number: 3 (lower is better)
Translates to: RSGAFGCFSLRL*VCSAILHVDSW
Trigger: CCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAAAAGCAACCGAATGCTCCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR GCA 72 bp TGGCCTTATAGCCTTCTCTTGCCCACAGTCCCCAGTTaGTACTCCCTTAAGTGCTCTAGTTGTTTTGCTACC +
Preference number: 3 (lower is better)
Translates to: WPYSLLLPTVPS*YSLKCSSCFAT
Trigger: GGTAGCAAAACAACTAGAGCACTTAAGGGAGTAGCAACTGGGGACTGTGGGCAAGAGAAGGCTATAAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR GCA 72 bp TTGAGATCCAAACCTGGGTCCTGTGCAAGAGCAGCATaGGCTCTCAATCACAGAGCCATCTCATCTTTCATC +
Preference number: 3 (lower is better)
Translates to: LRSKPGSCARAA*ALNHRAISSFI
Trigger: GATGAAAGATGAGATGGCTCTGTGATTGAGAGCGCATGCTGCTCTTGCACAGGACCCAGGTTTGGATCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CAA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCGAGTCAAGTTCTTGCTaGAGAACCAGAGATTCCTCC +
Preference number: 3 (lower is better)
Translates to: FSEALSLFSDFACGLLVLESSSC*RTRDSS
Trigger: GGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTC...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 72 bp GCGCTCTCAATCACAGAGCCATCTCATCTTTCATCCTaGACTACATGGCCTTATAGCCTTCTCTTGCCCACA +
Preference number: 3 (lower is better)
Translates to: ALSITEPSHLSS*TTWPYSLLLPT
Trigger: TGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATGGCTCTGTGATTGAGAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR GCA 72 bp CTCTTGCCCACAGTCCCCAGTTGCTACTCCCTTAAGTaGTCTAGTTGTTTTGCTACCTTGGGTAAACTTTGG +
Preference number: 3 (lower is better)
Translates to: LLPTVPSCYSLK*SSCFATLGKLW
Trigger: CCAAAGTTTACCCAAGGTAGCAAAACAACTAGAGCACTTAAGGGAGTAGCAACTGGGGACTGTGGGCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CAA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGAAGTGCTCTAGTTGTTTaGCTACCTTGGGTAAACTTT +
Preference number: 3 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERSALVV*LPWVNF
Trigger: AAAGTTTACCCAAGGTAGCAAAACAACTAGAGCACT...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR-3UTR CAA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCACCAGAGATTCCTCCTaGGCACCAGTTACATTTACT +
Preference number: 3 (lower is better)
Translates to: FSEALSLFSDFACGLLVLTRDSS*APVTFT
Trigger: AGTAAATGTAACTGGTGCCAAGGAGGAATCTCTGGT...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 72 bp GACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTaGGGTTTTCTACCTCTTAAACAGCACCTGTATCAC +
Preference number: 3 (lower is better)
Translates to: DSWFSHQAFGLI*GFLPLKQHLYH
Trigger: GTGATACAGGTGCTGTTTAAGAGGTAGAAAACCTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR GCA 72 bp CTGGGAAGAGATCTGAGTGAGTTAGAGTCAAGTTCTTaGTTGAGAACCAGAGATTCCTCCTTGGCACCAGTT +
Preference number: 3 (lower is better)
Translates to: LGRDLSELESSS*LRTRDSSLAPV
Trigger: AACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAACTCACTCAGATCTCTTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 72 bp TATTCTTTCCCAGGCTCCTCTGGGAAGAGATCTGAGTaGGTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGA +
Preference number: 3 (lower is better)
Translates to: YSFPGSSGKRSE*VRVKFLLENQR
Trigger: TCTCTGGTTCTCAAGCAAGAACTTGACTCTAACTCACTCAGATCTCTTCCCAGAGGAGCCTGGGAAAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR TCA 72 bp AACTCTTTAGAAGATGAAGGTCTAGTTTCTGTTTCCTaGAGCAGGGAGAGAAGTGGGGAGAACAGAATGTCC +
Preference number: 3 (lower is better)
Translates to: NSLEDEGLVSVS*SRERSGENRMS
Trigger: GGACATTCTGTTCTCCCCACTTCTCTCCCTGCTTCAGGAAACAGAAACTAGACCTTCATCTTCTAAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CCA 72 bp AAGTGCTCTAGTTGTTTTGCTACCTTGGGTAAACTTTaGGAGAATTCCAGTTTGAACAGCTGTGTAGGGTAC +
Preference number: 3 (lower is better)
Translates to: KCSSCFATLGKL*ENSSLNSCVGY
Trigger: GTACCCTACACAGCTGTTCAAACTGGAATTCTCCCAAAGTTTACCCAAGGTAGCAAAACAACTAGAGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGAGAGTCCCGAGAGTGCTaGCGAGCCAGGGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRESREC*RARASG
Trigger: CCCAGAGGCCCTGGCTCGGCAGCACTCTCGGGACTC...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGATGGGCCGGCCTAGCCTaGGAGATCGGAGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRWAGLA*EIGVEP
Trigger: GGGCTCCACTCCGATCTCCCAGGCTAGGCCGGCCCA...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGAACGAGCAGAGGCAGGTaGGTGGCCGCTTCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRTSRGR*VAASLW
Trigger: CCAGAGCGAAGCGGCCACTCACCTGCCTCTGCTCGT...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CAA 72 bp GAGCCAAGCTGCGGGTGGACGGCTGAGAAAGAGGCTTaGTACTCACGAGGTGCCTTTCCCGGCCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: EPSCGWTAEKEA*YSRGAFPGPGE
Trigger: CTCCCCAGGGCCGGGAAAGGCACCTCGTGAGTACAAAGCCTCTTTCTCAGCCGTCCACCCGCAGCTTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGAGTTTGCTCACTGCCTTaGGCCGGCCTAGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRVCSLP*AGLAWE
Trigger: CTCCCAGGCTAGGCCGGCCCAAGGCAGTGAGCAAAC...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACGCACAGGTGTGTGTTTaGGTACCAGCCCGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDAQVCV*VPARAA
Trigger: AGCGGCCCGGGCTGGTACTCAAACACACACCTGTGC...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACATCCCTGGTGCGAGCTaGCCCGCTTCTTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDIPGAS*PASWAG
Trigger: ACCTGCCCAAGAAGCGGGGCAGCTCGCACCAGGGAT...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACAGAAAGTTGGCAGCCTaGGCCAGGGTGCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDRKLAA*ARVPAA
Trigger: AGCAGCGGGCACCCTGGCCCAGGCTGCCAACTTTCT...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACGCTGCGCTCACTCCATaGCGAGGCGATGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDAALTP*RGDAAV
Trigger: AACAGCAGCATCGCCTCGGCATGGAGTGAGCGCAGC...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TTGGGAACACTGGAACACAGGAAGTGTCCTGAAGGAGTTCTGACCCCCACCAGGCCCGAGTCCCGAGAGTaGTGCCGAGCCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LGTLEHRKCPEGVLTPTRPESRE*CRARAS
Trigger: AGAGGCCCTGGCTCGGCAGCACTCTCGGGACTCGGG...CCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACAGATCTCAGCAGCTCTaGCTGCCACGCTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDRSQQL*LPRCLA
Trigger: GGCAAGGCAGCGTGGCAGGCAGAGCTGCTGAGATCT...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACTGGCATCCAGACAGCTaGTGCAGCCCTCAGGACACG +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDWHPDS*CSPQDT
Trigger: CGTGTCCTGAGGGCTGCACCAGCTGTCTGGATGCCA...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAACAGGGGCGGGGGCTaGGGCCGGAGCCGGCAACAG +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYNRGGG*GRSRQQ
Trigger: CTGTTGCCGGCTCCGGCCCCAGCCCCCGCCCCTGTT...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACAACTTTCCGCTCCCCTaGACCCGGGGCCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDNFPLP*TRGHSL
Trigger: AAGAGAGTGGCCCCGGGTCCAGGGGAGCGGAAAGTT...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGACGGCCAGTGGGAGTGTaGCCCCGGGTCACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERRPVGV*PRVTRA
Trigger: AGCTCTGGTGACCCGGGGTCACACTCCCACTGGCCG...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGACCACGTCTTCCTGGGTaGAGAGCCCTGATGACATTG +
Preference number: 4 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRPRLPG*RALMTL
Trigger: CAATGTCATCAGGGCTCTTCACCCAGGAAGACGTGG...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTCCCCTGGCTCCAGGCTaGGCTCACTCCATGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVPLAPG*AHSMPR
Trigger: CCTCGGCATGGAGTGAGCGCAGCCTGGAGCCAGGGG...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGAGCTCAGATCTTGGCTTaGCTTGGGACGGTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRAQILA*LGTVVE
Trigger: CTCCACTACCGTCCCAAGCCAAGCCAAGATCTGAGC...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGATCGTCGGGAAGAGCCTaGCAGGCTGCCGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERSSGRA*QAAEAE
Trigger: CTCGGCCTCGGCAGCCTGCCAGGCTCTTCCCGACGA...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGGAGCTGTGTGCTGGGTaGCTGGCTCCAGGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFEELCAG*LAPGRP
Trigger: CGGGCGCCCTGGAGCCAGGCACCCAGCACACAGCTC...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACAGCTGTCCATGCTGCTaGTCTTGCCAGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDSCPCC*SCQEKV
Trigger: CACCTTCTCCTGGCAAGAGCAGCAGCATGGACAGCT...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACCTGGGCGGACACTCTTaGTCTCTGGGAGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDLGGHS*SLGESS
Trigger: AGAGCTTTCTCCCAGAGAGCAAGAGTGTCCGCCCAG...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTGGGAACACTGGAACACAGGAAGTGTCCTGAAGGAGTTCTGACCCCCACCAGGAGGGGACAGCCCGGGTaGCATAGCAGAGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGTLEHRKCPEGVLTPTRRGQPG*HSRGSC
Trigger: GCAGCTTCCTCTGCTATGCCACCCGGGCTGTCCCCT...CCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGAGCCATTCCAGCCTCCTaGTCGATGGCCTCCGCACCG +
Preference number: 4 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERAIPAS*SMASAP
Trigger: CGGTGCGGAGGCCATCGACCAGGAGGCTGGAATGGC...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACCATGAGGCCTCGCAGTaGTTTGAGAGCTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDHEASQ*FESCPC
Trigger: GCATGGACAGCTCTCAAACCACTGCGAGGCCTCATG...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGAATTGCTTCCTGCTTTTaGATCCGCCCCTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRIASCF*IRPSAS
Trigger: AGAGGCTGAGGGGCGGATCCAAAAGCAGGAAGCAAT...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACGTGCTGACCAAGGGCTaGGAGCTAACTCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDVLTKG*ELTLGW
Trigger: CCAACCTAGAGTTAGCTCCCAGCCCTTGGTCAGCAC...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACAGTCCTGACTCTCCCTaGGACACACAGCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDSPDSP*DTQLPA
Trigger: AGCAGGAAGCTGTGTGTCCCAGGGAGAGTCAGGACT...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGAGACACTCTTGCTCTCTaGGAGAAAGCTCTCCAACGG +
Preference number: 4 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRDTLAL*EKALQR
Trigger: CCGTTGGAGAGCTTTCTCCCAGAGAGCAAGAGTGTC...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTGGGAACACTGGAACACAGGAAGTGTCCTGAAGGAGTTCTGACCCCCACCAGGGCGGGAAGAGCCAGGTaGCTTGCTGATGTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LGTLEHRKCPEGVLTPTRAGRAR*LADVWA
Trigger: CGCCCAGACATCAGCAAGCCACCTGGCTCTTCCCGC...CCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGAGAGAAAGGCCAGGGCTaGTTCAGCCCCCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: RLVFLRVRVPAPQVPTEREKGQG*FSPLWG
Trigger: CCCCCAAAGGGGGCTGAAGCAGCCCTGGCCTTTCTC...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTCCAGGGGCACACCTCTaGCACCCTGTGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVPGAHL*HPVVST
Trigger: AGTGCTGACCACAGGGTGGCAGAGGTGTGCCCCTGG...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACCTCAGCCTCTTCCTGTaGTTTGATCCTTGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDLSLFL*FDPCSP
Trigger: GGGAGAGCAAGGATCAAAGCACAGGAAGAGGCTGAG...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGAGCTGTGACTGTACTGTaGGTATGGAGGAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRAVTVL*VWRKKR
Trigger: CCTCTTCTTCCTCCATACCCACAGTACAGTCACAGC...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTCCGAGCCAGGGCCTCTaGGAACTCGGCCAGGTATCT +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVPSQGL*ELGQVS
Trigger: AGATACCTGGCCGAGTTCCCAGAGGCCCTGGCTCGG...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACGTTTCTCACCGGCCTTaGAGGAAGCTTTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDVSHRP*RKLCLA
Trigger: AGCCAGACAAAGCTTCCTCCAAGGCCGGTGAGAAAC...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTGGGAACACTGGAACACAGGAAGTGTCCTGAAGGAGTTCTGACCCCCACCAGGGTCAGGAGCATCCCATaGGCACACCTCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LGTLEHRKCPEGVLTPTRVRSIP*AHLSSP
Trigger: GGGACTGCTGAGGTGTGCCCATGGGATGCTCCTGAC...CCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGACCAGATTCATCAGATTaGGCTCTAGTCTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRPDSSD*ALVSSQ
Trigger: CTGGGAGGAGACTAGAGCCCAATCTGATGAATCTGG...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGTGGTTCGTGGAAGGCTaGGGGGACAGCCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVWFVEG*GDSPGG
Trigger: GCCACCCGGGCTGTCCCCTCAGCCTTCCACGAACCA...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTCTTGAAGGCTGGAGCTaGGGAGCCTTCGTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVLEGWS*GAFVGK
Trigger: CTTCCCGACGAAGGCTCCTCAGCTCCAGCCTTCAAG...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACGAGCACTGGCAGACCTaGAGCCCAGGGCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYEHWQT*SPGLGA
Trigger: GGCCCCCAGCCCTGGGCTTCAGGTCTGCCAGTGCTC...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGTGGAGACCTGGTGCCTaGTGGGTGGGTGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFEWRPGA*WVGEAA
Trigger: GGCTGCCTCACCCACCCATCAGGCACCAGGTCTCCA...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTCATGCCCACCCTCTGTaGGTGCCTCACTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVHAHPL*VPHSLQ
Trigger: CTGGAGAGAGTGAGGCACTCACAGAGGGTGGGCATG...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp TTGGGAACACTGGAACACAGGAAGTGTCCTGAAGGAGTTCTGACCCCCACCAGGAGTTCCTGTACCCTCTaGGTAGATGTCCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LGTLEHRKCPEGVLTPTRSSCTL*VDVPSP
Trigger: GGGGGAGGGGACATCTACTCAGAGGGTACAGGAACT...CCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp TGGGCCCAGGAAGTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAGGAGTGTCTGGCTGCTaGGAGGAGTCCCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: WAQEVPKLSLSQLFGNTGGVSGC*EESPGL
Trigger: GAGTCCAGGGGACTCCTCTCAGCAGCCAGACACTCC...TCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTACTTCCTGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGATTTTGTGTCCCCCTTTaGCGTGCCTTCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRFCVPL*RAFFLE
Trigger: TTCCAAGAAGAAGGCACGTCAAAGGGGGACACAAAA...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TTGGGAACACTGGAACACAGGAAGTGTCCTGAAGGAGTTCTGACCCCCACCAGGTTCTTCCCGGGGAGGTaGCCCTGGCTTCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: LGTLEHRKCPEGVLTPTRFFPGR*PWLPEL
Trigger: AAGTTCTGGAAGCCAGGGGCACCTCCCCGGGAAGAA...CCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATCGAGGGCAACCTGTTTaGTCACTGCCTTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYRGQPV*SLPWAG
Trigger: GCCGGCCCAAGGCAGTGAGCAAACAGGTTGCCCTCG...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGATCATCGGCTTCCCCCTaGACATGCCCACCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERSSASP*TCPPSV
Trigger: CACAGAGGGTGGGCATGTCCAGGGGGAAGCCGATGA...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCGGACACACAGCCTCCTaGCTCCGGACCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: FSEALSLFSDFACGLLVLGHTAS*LRTSLS
Trigger: GGAGAGGCTGGTCCGGAGCCAGGAGGCTGTGTGTCC...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACTGCTTGCTTTTCCTCTaGCTTGACTGCTTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDCLLFL*LDCFPR
Trigger: CCTTGGGAAGCAGTCAAGCCAGAGGAAAAGCAAGCA...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGAAGGCGATGCTGCTGTTaGGGTAGGAGCCTGAGCGTT +
Preference number: 4 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERRRCCC*GRSLSV
Trigger: AACGCTCAGGCTCCTACCTCAACAGCAGCATCGCCT...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATGAGCTTCCTGGGGCTTaGAGTGAGACGGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYELPGA*SETAEG
Trigger: CCCTTCAGCCGTCTCACTTCAAGCCCCAGGAAGCTC...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp TTGGGAACACTGGAACACAGGAAGTGTCCTGAAGGAGTTCTGACCCCCACCAGGACTGACTCCTGTCCTTaGGGGACTGTGGGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: LGTLEHRKCPEGVLTPTRTDSCP*GTVGFA
Trigger: GGCAAAACCCACAGTCCCTCAAGGACAGGAGTCAGT...CCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCAAGTGCTGCGGGTCTTaGGGAGGGCCGGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FSEALSLFSDFACGLLVLKCCGS*GGPVAS
Trigger: AGAAGCCACCGGCCCTCCGCAAGACCCGCAGCACTT...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGGCTTCCCCCTGGACATaGCCACCCTCTGTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFEASPWT*PPSVSA
Trigger: GGCACTCACAGAGGGTGGGCATGTCCAGGGGGAAGC...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGTGTGACTCTCCATCCTaGCCCAGGTCCAGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVCDSPS*PRSSAP
Trigger: GGGGGCGCTGGACCTGGGGCAGGATGGAGAGTCACA...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGATCCAGAGGGACACACTaGGTGCTGTTGAGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERSRGTH*VLLRSH
Trigger: GTGCGACCTCAACAGCACCCAGTGTGTCCCTCTGGA...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TGGGCCCAGGAAGTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGACCACCAGGCATGGTGTaGCATCCAGACAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: WAQEVPKLSLSQLFGNTGPPGMV*HPDSWC
Trigger: GCACCAGCTGTCTGGATGCCACACCATGCCTGGTGG...TCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTACTTCCTGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTCAGCTGCCCGCTACTTaGGTGTGGCACCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSQLPAT*VWHPLG
Trigger: GCCCAGCGGGTGCCACACCCAAGTAGCGGGCAGCTG...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTATCCCGAATATCCCCTaGCTCCAGGCTGCGCTCACT +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVIPNIP*LQAALT
Trigger: AGTGAGCGCAGCCTGGAGCCAGGGGATATTCGGGAT...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACCCTGAAGCCCAGGGCTaGGGGCCCGTCTGCCAACGA +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYPEAQG*GPVCQR
Trigger: TCGTTGGCAGACGGGCCCCCAGCCCTGGGCTTCAGG...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACCAGCCTCCTGGTCGATaGCCTCCGCACCGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYQPPGR*PPHRAH
Trigger: GTGAGCCCGGTGCGGAGGCCATCGACCAGGAGGCTG...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGACGTGGAGCATGCGGCTaGTGTGAGCGTTCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERRGACG*CERSVG
Trigger: ACCAACAGAACGCTCACACCAGCCGCATGCTCCACG...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGGCACTGCCCAGGGACTaGAGGGCAGGGTTGGGCACC +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQALPRD*RAGLGT
Trigger: GGTGCCCAACCCTGCCCTCCAGTCCCTGGGCAGTGC...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGAAGTGTTCGGAGTGTCTaGCTGCTGAGAGGAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERSVRSV*LLRGVP
Trigger: GGGGACTCCTCTCAGCAGCCAGACACTCCGAACACT...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTAGGGCACTGGATGTGTaGATGGGAGGAAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVRALDV*MGGRAC
Trigger: GCAGGCTCTTCCTCCCATCCACACATCCAGTGCCCT...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTGGGAACACTGGAACACAGGAAGTGTCCTGAAGGAGTTCTGACCCCCACCAGGCACAGGGCTCAACCTTaGTGTCACTGTCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LGTLEHRKCPEGVLTPTRHRAQP*CHCPSQ
Trigger: CTGACTCGGACAGTGACACCAAGGTTGAGCCCTGTG...CCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTTTTCTCAGGGGCAGCTaGCACACCTGCCTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVFLRGS*HTCLGY
Trigger: GTAACCCAGGCAGGTGTGCCAGCTGCCCCTGAGAAA...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CAA 72 bp GCTCCAACCCTTCTTCTACAGTTCCTTCTGAATGGGTaGCCATCTGGCCTCCTGGGCCCAGGAAGTACCCAA +
Preference number: 4 (lower is better)
Translates to: APTLLLQFLLNG*PSGLLGPGSTQ
Trigger: TTGGGTACTTCCTGGGCCCAGGAGGCCAGATGGCAACCCATTCAGAAGGAACTGTAGAAGAAGGGTTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATGGCTTCTCCGTTTCTTaGAGGCTGGAGCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYGFSVS*RLELRS
Trigger: GCTCCTCAGCTCCAGCCTTCAAGAAACGGAGAAGCC...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACTGCCTGATGGGTGGGTaGGGCAGCCTTCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYCLMGG*GSLLPA
Trigger: GGCTGGGAGAAGGCTGCCTCACCCACCCATCAGGCA...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTGCTGAGGGGCAAGTCTaGGACCTTGGGGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSAEGQV*DLGDLG
Trigger: GCCCAGGTCCCCAAGGTCTCAGACTTGCCCCTCAGC...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGCACTGCCGTCCTCAGTaGCAGGGCCTCTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVHCRPQ*QGLFHQ
Trigger: CTGGTGGAAGAGGCCCTGGCACTGAGGACGGCAGTG...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGGCAACAGGCCTGGCATaGCAGCACTGCCGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MRSSEAETEESGQKTRPLATGLA*QHCRPQ
Trigger: CTGAGGACGGCAGTGCTGGCATGCCAGGCCTGTTGC...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGAGACGCCGCAGCAGCTaGCCGCTACTTGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQRRRSS*PLLGCG
Trigger: GCCACACCCAAGTAGCGGGCAGCTGCTGCGGCGTCT...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTCGGGCTCACCATGGCTaGCTCAGCCTTCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVRAHHG*LSLLSF
Trigger: GAAAGAAAGAAGGCTGAGGCAGCCATGGTGAGCCCG...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATTGTCTCTTTGTGGGGTaGTACCCGGGGCCATGCTCT +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYCLFVG*YPGPCS
Trigger: AGAGCATGGCCCCGGGTAGCACCCCACAAAGAGACA...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGCCTGCCACGCTGCCTTaGCTCTGGAGAGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MRSSEAETEESGQKTRPLPATLP*LWREAW
Trigger: CCAAGCCTCTCTCCAGAGGCAAGGCAGCGTGGCAGG...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGCACAGCTCCTGGACTTaGCTCCCAGGGGCAGATCTC +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFEHSSWT*LPGADL
Trigger: GAGATCTGCCCCTGGGAGGCAAGTCCAGGAGCTGTG...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCAGCATGCAACAGGCCTaGCATGCCAGCACTGCCGTC +
Preference number: 4 (lower is better)
Translates to: FSEALSLFSDFACGLLVLSMQQA*HASTAV
Trigger: GACGGCAGTGCTGGCATGCCAGGCCTGTTGCATGCT...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCTGGGGGAAGCCTTCTTaGACAGGGTCCGTCTCAGCG +
Preference number: 4 (lower is better)
Translates to: FSEALSLFSDFACGLLVLWGKPS*TGSVSA
Trigger: CGCTGAGACGGACCCTGTCCAAGAAGGCTTCCCCCA...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGACTTCTGCAGGGAGATaGGCCTGGCTCGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFETSAGR*AWLEGV
Trigger: GACTCCCTCGAGCCAGGCCCATCTCCCTGCAGAAGT...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTGGGAGACAACATTCTTaGCTCTCCCAGGCAGATCCC +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVGRQHS*LSQADP
Trigger: GGGATCTGCCTGGGAGAGCCAAGAATGTTGTCTCCC...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTGGGAACACTGGAACACAGGAAGTGTCCTGAAGGAGTTCTGACCCCCACCAGGATGTGGAGGCCGGAGTaGGAGACAACATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LGTLEHRKCPEGVLTPTRMWRPE*ETTFLA
Trigger: AGCCAAGAATGTTGTCTCCCACTCCGGCCTCCACAT...CCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACAGAAGGTTGCCTTCTTaGGGGATTTCTGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDRRLPS*GISAFL
Trigger: AAGAAAGGCAGAAATCCCCCAAGAAGGCAACCTTCT...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGGGAGGAAGCTTTGTCTaGCTGTGGGCTGGACCGCTC +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFEGGSFV*LWAGPL
Trigger: GAGCGGTCCAGCCCACAGCCAGACAAAGCTTCCTCC...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACGAGCTCCCGTGTTCCTaGAGTTCATCTTTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDELPCS*SSSFSF
Trigger: GAAACTAAAAGATGAACTCCAGGAACACGGGAGCTC...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTGACGTGCCTTCTTCTTaGAAGGGGAGTCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVDVPSS*KGSPAS
Trigger: AGAGGCAGGACTCCCCTTCCAAGAAGAAGGCACGTC...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATGGGGACCTGGGCAGGTaGTTTCCAAGGACAGATAGC +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYGDLGR*FPRTDS
Trigger: GCTATCTGTCCTTGGAAACCACCTGCCCAGGTCCCC...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TGGGCCCAGGAAGTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGACTCCCAGTCACCTTCTaGGCACAGGGCTCAACCTTG +
Preference number: 4 (lower is better)
Translates to: WAQEVPKLSLSQLFGNTGLPVTF*AQGSTL
Trigger: CAAGGTTGAGCCCTGTGCCCAGAAGGTGACTGGGAG...TCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTACTTCCTGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTAAGCAAGAGAAGAAATaGCCACTGCTCTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVKQEKK*PLLWPP
Trigger: TGGGGGCCAGAGCAGTGGTCATTTCTTCTCTTGCTT...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTCTTGTAGGAGCATGTTaGGAAAGTTGGCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVLVGAC*ESWQPG
Trigger: CCCAGGCTGCCAACTTTCTCAACATGCTCCTACAAG...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGCGGAGCTGGCCCTCATaGCATTCCAGGAAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVRSWPS*HSRKGG
Trigger: TCCCCCTTTCCTGGAATGTCATGAGGGCCAGCTCCG...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCCGGCCAGGTATCTCATaGAAGAGCGGCCCAATCCCT +
Preference number: 4 (lower is better)
Translates to: FSEALSLFSDFACGLLVLRPGIS*KSGPIP
Trigger: AGGGATTGGGCCGCTCTTTCATGAGATACCTGGCCG...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGAGCCGCCACACTGAGTaGCTTCTGCAGGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVSRHTE*LLQGDG
Trigger: CCCATCTCCCTGCAGAAGTCACTCAGTGTGGCGGCT...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGCTCCCAAGGGCATACTaGCTCCTGTCCTTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFELPRAY*LLSLRD
Trigger: GTCCCTCAAGGACAGGAGTCAGTATGCCCTTGGGAG...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGGTGGCTGGCCCCCGGTaGAGGGTTAAAGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQVAGPR*RVKGQQ
Trigger: CTGCTGACCTTTAACCCTGCACCGGGGGCCAGCCAC...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGCCAGCCCGGGCCGCTTaGACACTGGTTGATGTCCAC +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQPARAA*TLVDVH
Trigger: GTGGACATCAACCAGTGTGCAAGCGGCCCGGGCTGG...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGATTTGAGAGCTGTCCATaGTGCTGCTCTTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERFESCP*CCSCQE
Trigger: CTCCTGGCAAGAGCAGCAGCATGGACAGCTCTCAAA...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACCGCACGGAACCCTGCTaGAGAGGGGTCTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYRTEPC*RGVLRL
Trigger: CAGCCTCAAGACCCCTCTGCAGCAGGGTTCCGTGCG...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTTGCTACCCGGGGCCATaGTCTCCCAGGGGCAGATTG +
Preference number: 4 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSCYPGP*SPRGRL
Trigger: CAATCTGCCCCTGGGAGAGCATGGCCCCGGGTAGCA...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGCTCAGCAGCTCTGCCTaGCACGCTGCCTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQLSSSA*HAALPL
Trigger: CAGAGGCAAGGCAGCGTGGCAGGCAGAGCTGCTGAG...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTGGACACACAGCTTCCTaGTTCCCAAAGTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVGHTAS*FPKLLV
Trigger: GACCAGCAACTTTGGGAAGCAGGAAGCTGTGTGTCC...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGCCGGGGAGGTGCCCCTaGCTTCCAGAACTTAGGGAT +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVPGRCP*LPELRD
Trigger: ATCCCTAAGTTCTGGAAGCCAGGGGCACCTCCCCGG...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGGCAGGGAGATGGGCCTaGCTCGAGGGAGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVAGRWA*LEGVFL
Trigger: GAGAAAGACTCCCTCGAGCCAGGCCCATCTCCCTGC...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTGGGAACACTGGAACACAGGAAGTGTCCTGAAGGAGTTCTGACCCCCACCAGGGGGGTCTTGAGGCTGTaGGATTTTGAGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: LGTLEHRKCPEGVLTPTRGVLRL*DFEKTL
Trigger: CAAGGTCTTCTCAAAATCCCACAGCCTCAAGACCCC...CCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTCCCAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTCCTGGGAGATCGGAGTaGAGCCCCTGTGCTCACCTC +
Preference number: 4 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSPGRSE*SPCAHL
Trigger: GAGGTGAGCACAGGGGCTCCACTCCGATCTCCCAGG...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGGGGTTGGGCACCTCTTaGTATCCCGCGGGGGATTCC +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQGLGTS*YPAGDS
Trigger: GGAATCCCCCGCGGGATACCAAGAGGTGCCCAACCC...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGGGACGGAAGAGCCTCTaGGTGTGCGTCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFEGRKSL*VCVSFA
Trigger: AGCAAAGGAGACGCACACCCAGAGGCTCTTCCGTCC...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATACCTGGCTACCCCCATaGCTTAGGAGTTTCTCACCG +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYTWLPP*LRSFSP
Trigger: CGGTGAGAAACTCCTAAGCCATGGGGGTAGCCAGGT...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATCACACTTGCAGTACCTaGCTACCCCCATGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYHTCST*LPPWLR
Trigger: CCTAAGCCATGGGGGTAGCCAGGTACTGCAAGTGTG...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCACACCTCTATGGGCCTaGAGCTCCCGTGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FSEALSLFSDFACGLLVLTPLWA*SSRVPG
Trigger: TCCAGGAACACGGGAGCTCCAGGCCCATAGAGGTGT...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATTCCACCACGTCTTCCTaGGTGAAGAGCCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYSTTSS*VKSPDD
Trigger: GTCATCAGGGCTCTTCACCCAGGAAGACGTGGTGGA...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CAA 72 bp TTTACTCTATGGCCTCTGTGTAAACTGGCCATGGCGTaGTACACCTGTGATCCTGGACCCCAGGAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: FTLWPLCKLAMA*YTCDPGPQEVE
Trigger: CTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGGCCAGTTTACACAGAGGCCATAGAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATCGCTTGCACACTGGTTaGTGTCCACACTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYRLHTG*CPHFGG
Trigger: ACCTCCAAAGTGTGGACATCAACCAGTGTGCAAGCG...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCGCTGCAGAGGGGTCTTaGGGCTGTGGGATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: FSEALSLFSDFACGLLVLAAEGS*GCGILR
Trigger: TCTCAAAATCCCACAGCCTCAAGACCCCTCTGCAGC...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGCCTCTTCCTGTGCTTTaGTCCTTGCTCTCCCCGGCA +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVPLPVL*SLLSPA
Trigger: TGCCGGGGAGAGCAAGGATCAAAGCACAGGAAGAGG...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGTGTCCTTCTACTCCCTaGCCAACAGTGCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVCPSTP*PTVLRG
Trigger: GCCCCTCAGCACTGTTGGTCAGGGAGTAGAAGGACA...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTAGTCAGGGGGAGGGCTaGGTTCTCCAGCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSSQGEG*VLQPLL
Trigger: AAGGAGAGGCTGGAGAACTCAGCCCTCCCCCTGACT...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGCATCCAGACAGCTGGTaGAGCCCTCAGGACACGGCT +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQHPDSW*SPQDTA
Trigger: AGCCGTGTCCTGAGGGCTGCACCAGCTGTCTGGATG...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGCCCCCTTTTCTCCACTaGCACAGACAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQPPFLH*HRQGPP
Trigger: TGGAGGGCCCTGTCTGTGGCAGTGGAGAAAAGGGGG...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTCCCACCCTCTGTGAGTaGCTCACTCTCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSPTLCE*LTLSSP
Trigger: GGGACTGGAGAGAGTGAGGCACTCACAGAGGGTGGG...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGTCCCAAGGACACACTTaGAGTACCTGGCTACCCCCA +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFESQGHT*STWLPP
Trigger: TGGGGGTAGCCAGGTACTGCAAGTGTGTCCTTGGGA...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCGGGCAGATTGCTTCCTaGTTTTGGATCCGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: FSEALSLFSDFACGLLVLGQIAS*FWIRPS
Trigger: TGAGGGGCGGATCCAAAAGCAGGAAGCAATCTGCCC...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATGCACTGGCAGCTACCTaGCTGGATCCAGAATCTGTA +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYALAAT*LDPESV
Trigger: TACAGATTCTGGATCCAGGCAGGTAGCTGCCAGTGC...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAGATTCTGTCTCCTTTaGCGTTCTGGCTCGCATCCC +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYRFCLL*RSGSHP
Trigger: GGGATGCGAGCCAGAACGGCAAAGGAGACAGAATCT...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGCTGTCCCCTGACCTCTaGGGTGAGGTCTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQLSPDL*GEVWLE
Trigger: CTCAAGCCAGACCTCACCCCAGAGGTCAGGGGACAG...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACGGGTGTGGCACCCGCTaGGCAGTTCGAGACAGAAAC +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYGCGTR*AVRDRN
Trigger: GTTTCTGTCTCGAACTGCCCAGCGGGTGCCACACCC...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTCTCTGGAGAGAGGCTTaGGCTTTCTCTGTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVLWREA*AFSVSL
Trigger: AAGAGACACAGAGAAAGCCCAAGCCTCTCTCCAGAG...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGGCAAGTCTGAGACCTTaGGGACCTGGGCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVASLRP*GPGQVV
Trigger: AACCACCTGCCCAGGTCCCCAAGGTCTCAGACTTGC...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGTGGCGGGTCCATTCCTaGTTCGGGTTCAGTTACTTC +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFEWRVHS*FGFSYF
Trigger: GAAGTAACTGAACCCGAATCAGGAATGGACCCGCCA...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGACTGCCCAAACTACCTaGGCTTCCTGGGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: MRSSEAETEESGQKTRPLTAQTT*ASWGLK
Trigger: CTTCAAGCCCCAGGAAGCTCAGGTAGTTTGGGCAGT...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGCAGCTCTCCCTTCTCTaGTGCCCTGTCACTTGCTTC +
Preference number: 4 (lower is better)
Translates to: MRSSEAETEESGQKTRPLQLSLL*CPVTCF
Trigger: GAAGCAAGTGACAGGGCATCAGAGAAGGGAGAGCTG...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTCTGCCATGGTACCCTTaGTTTTATTTCCTTCCGGGT +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVLPWYP*FYFLPG
Trigger: ACCCGGAAGGAAATAAAATCAAGGGTACCATGGCAG...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGGCTTGGCTTTGGAACTaGCTTGGCTCCAGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFEAWLWN*LGSSLK
Trigger: CTTGAGACTGGAGCCAAGTCAGTTCCAAAGCCAAGC...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATCATTGTGCAGGGCAATaGTCATGTAGCGTGGTTCGT +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYHCAGQ*SCSVVR
Trigger: ACGAACCACGCTACATGAGCATTGCCCTGCACAATG...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGGAGAGCTGTCCATGCTaGTGCTCTTGCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVESCPC*CSCQEK
Trigger: CTTCTCCTGGCAAGAGCAGCAGCATGGACAGCTCTC...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACTCTCAGTCTCAGGGGTaGCCTCCCCACCATCCTTCT +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYSQSQG*PPHHPS
Trigger: AGAAGGATGGTGGGGAGGGCACCCCTGAGACTGAGA...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGGGGCCGCTTGCACACTaGTTGATGTCCACACTTTGG +
Preference number: 4 (lower is better)
Translates to: MRSSEAETEESGQKTRPLGPLAH*LMSTLW
Trigger: CCAAAGTGTGGACATCAACCAGTGTGCAAGCGGCCC...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACCGCTTCTTGGGCAGGTaGGGGTTGTTAGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYRFLGR*GLLAAI
Trigger: GATGGCTGCTAACAACCCCCACCTGCCCAAGAAGCG...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATCTAAGCATCCCTTTCTaGAGGGAGTCTCCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYLSIPF*RESPFL
Trigger: CAGGAAAGGAGACTCCCTCCAGAAAGGGATGCTTAG...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGACGCTGCCTTGCCTCTaGAGAGAGGCTTGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQTLPCL*REAWAF
Trigger: GAAAGCCCAAGCCTCTCTCCAGAGGCAAGGCAGCGT...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CAA 72 bp GACCAGGCGACTCTCTTTCAGAAGTGGAGCATTCGGTaGCTTTTCTCTGAGGCTCTGAGTCTGTTCAGCGAT +
Preference number: 4 (lower is better)
Translates to: DQATLFQKWSIR*LFSEALSLFSD
Trigger: ATCGCTGAACAGACTCAGAGCCTCAGAGAAAAGCAACCGAATGCTCCACTTCTGAAAGAGAGTCGCCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACCCAAGGACAAAACCCTaGCTCTCCAGAGGGACACAC +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYPRTKP*LSRGTH
Trigger: GTGTGTCCCTCTGGAGAGTCAGGGTTTTGTCCTTGG...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACAGTGTCCAGTCTGGGTaGAGGGAAGGAACCAGCACA +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYSVQSG*REGTST
Trigger: TGTGCTGGTTCCTTCCCTGCACCCAGACTGGACACT...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTACACTGAGTGACTTCTaGAGGGAGATGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSTLSDF*REMGLA
Trigger: AGCCAGGCCCATCTCCCTGCAGAAGTCACTCAGTGT...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGCTTGCCTGGAAGTTCTaGATTCTCCCAGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVLAWKF*ILPGAD
Trigger: ATCTGCCCCTGGGAGAATGCAGAACTTCCAGGCAAG...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGGACAAACGTGGAGCATaGGGCTGGTGTGAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQDKRGA*GWCERS
Trigger: AGAACGCTCACACCAGCCGCATGCTCCACGTTTGTC...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTTTCTCCCCAAAAACTTaGCTCAGTGTGGTCATCGTT +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVFSPKT*LSVVIV
Trigger: AACGATGACCACACTGAGGCAAGTTTTTGGGGAGAA...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGTTCTCCCCAGAAGGTTaGCTTCTTGGGGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFEFSPEG*LLGGFL
Trigger: CAGAAATCCCCCAAGAAGGCAACCTTCTGGGGAGAA...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACCTCCCAGGGGCAGATTaGTTCCTGCTTTTGGATCCG +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYLPGAD*FLLLDP
Trigger: CGGATCCAAAAGCAGGAAGCAATCTGCCCCTGGGAG...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTGAGAAGTGTCCAGTCTaGGTGCAGGGAAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSEKCPV*VQGRNQ
Trigger: CTGGTTCCTTCCCTGCACCCAGACTGGACACTTCTC...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTGGGAGTCTCCTTTCCTaGGAGAGACTTCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSGSLLS*ERLPIC
Trigger: GCAGATGGGAAGTCTCTCCCAGGAAAGGAGACTCCC...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGCACTGGATGTGTGGATaGGAGGAAGAGCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQHWMCG*EEEPAS
Trigger: ACTGGCAGGCTCTTCCTCCCATCCACACATCCAGTG...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGTTTCCGCCACAACCATaGTGTAGTCCCAGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVFPPQP*CSPSGH
Trigger: ATGACCACTGGGACTACATCATGGTTGTGGCGGAAA...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTTTCTCCTCATCTTTGTaGACTTCTCCTTTTGATGGG +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVFSSSL*TSPFDG
Trigger: CCCATCAAAAGGAGAAGTTCACAAAGATGAGGAGAA...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTCATAGCAGAGGAAGCTaGCCCAACAAAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSHSRGS*PNKAAA
Trigger: TGCTGCTGCTTTGTTGGGGCAGCTTCCTCTGCTATG...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGTTCCTCTCTCTCTTTTaGCTGCCGATAGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFEFLSLF*LPIGFL
Trigger: GAGGAAACCTATCGGCAGGCAAAAGAGAGAGAGGAA...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGTTCCTCTGGCTTGACTaGTTCCCAAGGACACACTTG +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVFLWLD*FPRTHL
Trigger: CAAGTGTGTCCTTGGGAAGCAGTCAAGCCAGAGGAA...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACGGGGCAGACTGTCTCTaGTGCCTTCAAGAGATGTCT +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYGADCL*CLQEMS
Trigger: AGACATCTCTTGAAGGCAGCAGAGACAGTCTGCCCC...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTGCCCTGATGACATTGTaGCTTCTAAGGGGCAGACTG +
Preference number: 4 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSALMTL*LLRGRL
Trigger: CAGTCTGCCCCTTAGAAGGCACAATGTCATCAGGGC...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGCCAGGGACAGATGTCTaGCATGGTACCCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFEPGTDV*HGTLDF
Trigger: AAAATCAAGGGTACCATGGCAGACATCTGTCCCTGG...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACCTCTGGGGTGAGGTCTaGCTTGAGTCCATAGAACGT +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYLWGEV*LESIER
Trigger: ACGTTCTATGGACTCAAGCCAGACCTCACCCCAGAG...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp TGGGCCCAGGAAGTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGACGCTCTTTCTCCTCTTaGGATTTCTCCTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: WAQEVPKLSLSQLFGNTGRSFSS*DFSFSS
Trigger: AGATGAAAAGGAGAAATCTCAAGAGGAGAAAGAGCG...TCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTACTTCCTGGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGATCCAGATCCTCTCCTaGAGTCTCTTCCTGTACCTT +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVIQILS*SLFLYL
Trigger: AAGGTACAGGAAGAGACTCCAGGAGAGGATCTGGAT...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACACAAACCTGGCAGTGTaGAAGGCAGTAGAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYTNLAV*KAVESS
Trigger: ACTGCTCTCTACTGCCTTCCACACTGCCAGGTTTGT...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTATTTTCTTTCTTGCCTaGAAGTTCTGCATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PLPKLESQVVISRFVLAVIFFLA*KFCILP
Trigger: TGGGAGAATGCAGAACTTCCAGGCAAGAAAGAAAAT...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGCCTGCCGGGTCTTCCTaGACCACATTTTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQPAGSS*TTFSFL
Trigger: CAAGAAAGAAAATGTGGTCCAGGAAGACCCGGCAGG...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGTTGATGTCCACACTTTaGAGGTCGATGTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQLMSTL*RSMSIC
Trigger: GCAGATGGACATCGACCTCCAAAGTGTGGACATCAA...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCTTGGGTTATGTATTCTaGGAGAGAACCCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: FSEALSLFSDFACGLLVLLGYVF*ERTHLQ
Trigger: CTGAAGATGGGTTCTCTCCCAGAATACATAACCCAA...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CCA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGTCGACAGGAACCACTTaGGTTATGTATTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVSTGTT*VMYSGR
Trigger: TCTCCCAGAATACATAACCCAAGTGGTTCCTGTCGA...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CAA 72 bp GAGAGCGTCTCTCCTTCTCTGTTCTCTGTTGTCACTTaGGATACCAGCCGTGACATAAATGTCAGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: ESVSPSLFSVVT*DTSRDINVRVS
Trigger: AGACACTCTGACATTTATGTCACGGCTGGTATCCAAAGTGACAACAGAGAACAGAGAAGGAGAGACGCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR GCA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGGTTGAAAGTGTTGCTTaGTTTTCCTCTGGCTTGACT +
Preference number: 4 (lower is better)
Translates to: MRSSEAETEESGQKTRPLVESVA*FSSGLT
Trigger: AGTCAAGCCAGAGGAAAAGCAAGCAACACTTTCAAC...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CAA 72 bp GGAAGAGATCTGAGTGAGTTAGAGTCAAGTTCTTGCTaGAGAACCAGAGATTCCTCCTTGGCACCAGTTACA +
Preference number: 4 (lower is better)
Translates to: GRDLSELESSSC*RTRDSSLAPVT
Trigger: TGTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAACTCACTCAGATCTCTTCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CAA 72 bp TTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTaGGTCTCATTTGAGGTTTTCTACCTCTTAAACAGC +
Preference number: 4 (lower is better)
Translates to: FCMWTPGSPTRH*VSFEVFYLLNS
Trigger: GCTGTTTAAGAGGTAGAAAACCTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
3UTR CAA 72 bp TCCCCAGTTGCTACTCCCTTAAGTGCTCTAGTTGTTTaGCTACCTTGGGTAAACTTTGGGAGAATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SPVATPLSALVV*LPWVNFGRIPV
Trigger: AACTGGAATTCTCCCAAAGTTTACCCAAGGTAGCAAAACAACTAGAGCACTTAAGGGAGTAGCAACTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR TCA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGACAGATTTCTGCTGTTaGAAGTGTTGCTTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQTDFCC*KCCLLF
Trigger: GAAAAGCAAGCAACACTTTCAACAGCAGAAATCTGT...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp GAGCCTGGCAGGCTGCCGAGGCCGAGAGAGCCCGAGTCCCGAGAGTaGTGCCGAGCCAGGGCCTCTGGGAACTCGGCCAGGTATCTCATG +
Preference number: 5 (lower is better)
Translates to: EPGRLPRPREPESRE*CRARASGNSARYLM
Trigger: CATGAGATACCTGGCCGAGTTCCCAGAGGCCCTGGCTCGGCAGCACTCTCGGGACTCGGGCTCTCTCGGCCTCGGCAGCCTGCCAGGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp CCTGGCAGGCTGCCGAGGCCGAGAGAGCCCGAGTCCCGAGAGTGCTaGCGAGCCAGGGCCTCTGGGAACTCGGCCAGGTATCTCATGAAA +
Preference number: 5 (lower is better)
Translates to: PGRLPRPREPESREC*RARASGNSARYLMK
Trigger: TTTCATGAGATACCTGGCCGAGTTCCCAGAGGCCCTGGCTCGGCAGCACTCTCGGGACTCGGGCTCTCTCGGCCTCGGCAGCCTGCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp TGTTCCCAGAGAGGTCCTGAAGGACGGTCTCATCCCCCATCCGAGTaGCCTGCAGGGCCAGCTGAAGGTGGCTGGCCCCCGGTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: CSQRGPEGRSHPPSE*PAGPAEGGWPPVQG
Trigger: ACCCTGCACCGGGGGCCAGCCACCTTCAGCTGGCCCTGCAGGCCACTCGGATGGGGGATGAGACCGTCCTTCAGGACCTCTCTGGGAACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp TCCCACTGTCAGGTTGTGAGCACTGGCAGACCTGAAGCCCAGGGCTaGGGGCCCGTCTGCCAACGACTCTCGGCCGTCTGTGGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: SHCQVVSTGRPEAQG*GPVCQRLSAVCGGS
Trigger: GCTTCCCCCACAGACGGCCGAGAGTCGTTGGCAGACGGGCCCCCAGCCCTGGGCTTCAGGTCTGCCAGTGCTCACAACCTGACAGTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 90 bp TCTTGCGGAGGGCCGGTGGCTTCTCCGTTTCTTGAAGGCTGGAGCTaGGGAGCCTTCGTCGGGAAGAGCCTGGCAGGCTGCCGAGGCCGA +
Preference number: 5 (lower is better)
Translates to: SCGGPVASPFLEGWS*GAFVGKSLAGCRGR
Trigger: TCGGCCTCGGCAGCCTGCCAGGCTCTTCCCGACGAAGGCTCCTCAGCTCCAGCCTTCAAGAAACGGAGAAGCCACCGGCCCTCCGCAAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 90 bp GAGATGGGCCTGGCTCGAGGGAGTCTTTCTCCCACTGTCAGGTTGTaGGCACTGGCAGACCTGAAGCCCAGGGCTGGGGGCCCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: EMGLARGSLSPTVRL*ALADLKPRAGGPSA
Trigger: GGCAGACGGGCCCCCAGCCCTGGGCTTCAGGTCTGCCAGTGCTCACAACCTGACAGTGGGAGAAAGACTCCCTCGAGCCAGGCCCATCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 90 bp TGCCACAGACAGGGCCCTCCAGATCTTGGTACGAGCAGAGGCAGGTaGGTGGCCGCTTCGCTCTGGCCCTGCCGGGTCTTCCTGGACCAC +
Preference number: 5 (lower is better)
Translates to: CHRQGPPDLGTSRGR*VAASLWPCRVFLDH
Trigger: GTGGTCCAGGAAGACCCGGCAGGGCCAGAGCGAAGCGGCCACTCACCTGCCTCTGCTCGTACCAAGATCTGGAGGGCCCTGTCTGTGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp CATCCGAGTGGCCTGCAGGGCCAGCTGAAGGTGGCTGGCCCCCGGTaGAGGGTTAAAGGTCAGCAGAGCCCTGTAGGCTTTCGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: HPSGLQGQLKVAGPR*RVKGQQSPVGFRVS
Trigger: GGAGACCCGAAAGCCTACAGGGCTCTGCTGACCTTTAACCCTGCACCGGGGGCCAGCCACCTTCAGCTGGCCCTGCAGGCCACTCGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp GTTGTGAGCACTGGCAGACCTGAAGCCCAGGGCTGGGGGCCCGTCTaGCAACGACTCTCGGCCGTCTGTGGGGGAAGCCTTCTTGGACAG +
Preference number: 5 (lower is better)
Translates to: VVSTGRPEAQGWGPV*QRLSAVCGGSLLGQ
Trigger: CTGTCCAAGAAGGCTTCCCCCACAGACGGCCGAGAGTCGTTGGCAGACGGGCCCCCAGCCCTGGGCTTCAGGTCTGCCAGTGCTCACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GCCGAGAGAGCCCGAGTCCCGAGAGTGCTGCCGAGCCAGGGCCTCTaGGAACTCGGCCAGGTATCTCATGAAAGAGCGGCCCAATCCCTG +
Preference number: 5 (lower is better)
Translates to: AERARVPRVLPSQGL*ELGQVSHERAAQSL
Trigger: CAGGGATTGGGCCGCTCTTTCATGAGATACCTGGCCGAGTTCCCAGAGGCCCTGGCTCGGCAGCACTCTCGGGACTCGGGCTCTCTCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp CGTTTCTTGAAGGCTGGAGCTGAGGAGCCTTCGTCGGGAAGAGCCTaGCAGGCTGCCGAGGCCGAGAGAGCCCGAGTCCCGAGAGTGCTG +
Preference number: 5 (lower is better)
Translates to: RFLKAGAEEPSSGRA*QAAEAERARVPRVL
Trigger: CAGCACTCTCGGGACTCGGGCTCTCTCGGCCTCGGCAGCCTGCCAGGCTCTTCCCGACGAAGGCTCCTCAGCTCCAGCCTTCAAGAAACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp AAGGTGGGGCTGACAGAGGAGCCCTTAGAGGCCATTCCAGCCTCCTaGTCGATGGCCTCCGCACCGGGCTCACCATGGCTGCCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: KVGLTEEPLEAIPAS*SMASAPGSPWLPQP
Trigger: AGGCTGAGGCAGCCATGGTGAGCCCGGTGCGGAGGCCATCGACCAGGAGGCTGGAATGGCCTCTAAGGGCTCCTCTGTCAGCCCCACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 90 bp AGTGCTGCCGAGCCAGGGCCTCTGGGAACTCGGCCAGGTATCTCATaGAAGAGCGGCCCAATCCCTGGTGCGAGCTGCCCCGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: SAAEPGPLGTRPGIS*KSGPIPGASCPASW
Trigger: CCAAGAAGCGGGGCAGCTCGCACCAGGGATTGGGCCGCTCTTTCATGAGATACCTGGCCGAGTTCCCAGAGGCCCTGGCTCGGCAGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp CCAGGGCCTCTTCCACCAGGCATGGTGTGGCATCCAGACAGCTGGTaGAGCCCTCAGGACACGGCTGGCACCGTAGCAGCTTCCCTAAGC +
Preference number: 5 (lower is better)
Translates to: PGPLPPGMVWHPDSW*SPQDTAGTVAASLS
Trigger: GCTTAGGGAAGCTGCTACGGTGCCAGCCGTGTCCTGAGGGCTGCACCAGCTGTCTGGATGCCACACCATGCCTGGTGGAAGAGGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp CTCGGCAACGGTAGGCCACCAGCATACTCAGGAAGACCGCCAGCATaGAACAGGCCTGGCATGCCAGCACTGCCGTCCTCAGTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: LGNGRPPAYSGRPPA*NRPGMPALPSSVPG
Trigger: CCCTGGCACTGAGGACGGCAGTGCTGGCATGCCAGGCCTGTTGCATGCTGGCGGTCTTCCTGAGTATGCTGGTGGCCTACCGTTGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GTGCCAGGGCCTCTTCCACCAGGCATGGTGTGGCATCCAGACAGCTaGTGCAGCCCTCAGGACACGGCTGGCACCGTAGCAGCTTCCCTA +
Preference number: 5 (lower is better)
Translates to: VPGPLPPGMVWHPDS*CSPQDTAGTVAASL
Trigger: TAGGGAAGCTGCTACGGTGCCAGCCGTGTCCTGAGGGCTGCACCAGCTGTCTGGATGCCACACCATGCCTGGTGGAAGAGGCCCTGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp CTTCATCTTCGCAGGGGGCGAGGGCAACCTGTTTGCTCACTGCCTTaGGCCGGCCTAGCCTGGGAGATCGGAGTGGAGCCCCTGTGCTCA +
Preference number: 5 (lower is better)
Translates to: LHLRRGRGQPVCSLP*AGLAWEIGVEPLCS
Trigger: TGAGCACAGGGGCTCCACTCCGATCTCCCAGGCTAGGCCGGCCCAAGGCAGTGAGCAAACAGGTTGCCCTCGCCCCCTGCGAAGATGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp CACCAGCATACTCAGGAAGACCGCCAGCATGCAACAGGCCTGGCATaGCAGCACTGCCGTCCTCAGTGCCAGGGCCTCTTCCACCAGGCA +
Preference number: 5 (lower is better)
Translates to: HQHTQEDRQHATGLA*QHCRPQCQGLFHQA
Trigger: TGCCTGGTGGAAGAGGCCCTGGCACTGAGGACGGCAGTGCTGGCATGCCAGGCCTGTTGCATGCTGGCGGTCTTCCTGAGTATGCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp GGGAACTCGGCCAGGTATCTCATGAAAGAGCGGCCCAATCCCTGGTaGGAGCTGCCCCGCTTCTTGGGCAGGTGGGGGTTGTTAGCAGCC +
Preference number: 5 (lower is better)
Translates to: GNSARYLMKERPNPW*ELPRFLGRWGLLAA
Trigger: GGCTGCTAACAACCCCCACCTGCCCAAGAAGCGGGGCAGCTCGCACCAGGGATTGGGCCGCTCTTTCATGAGATACCTGGCCGAGTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp TCTGGAGGGACTCTTCATCTTCGCAGGGGGCGAGGGCAACCTGTTTaGTCACTGCCTTGGGCCGGCCTAGCCTGGGAGATCGGAGTGGAG +
Preference number: 5 (lower is better)
Translates to: SGGTLHLRRGRGQPV*SLPWAGLAWEIGVE
Trigger: CTCCACTCCGATCTCCCAGGCTAGGCCGGCCCAAGGCAGTGAGCAAACAGGTTGCCCTCGCCCCCTGCGAAGATGAAGAGTCCCTCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GCCCCCTTTGGGGGCATCCACATGGGCTCAGATCTTGGCTTGGCTTaGGACGGTAGTGGAGGCAGAGAGCGCAAGGGCCTTTGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: APFGGIHMGSDLGLA*DGSGGRERKGLWLP
Trigger: AGGGAGCCAAAGGCCCTTGCGCTCTCTGCCTCCACTACCGTCCCAAGCCAAGCCAAGATCTGAGCCCATGTGGATGCCCCCAAAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp AGGTCAGCAGAGCCCTGTAGGCTTTCGGGTCTCCCTCTGCCACACTaGGAACAAGCGCCTGATACCACTCCACGTCCTCCTCCACGCTCG +
Preference number: 5 (lower is better)
Translates to: RSAEPCRLSGLPLPH*EQAPDTTPRPPPRS
Trigger: CGAGCGTGGAGGAGGACGTGGAGTGGTATCAGGCGCTTGTTCGCAGTGTGGCAGAGGGAGACCCGAAAGCCTACAGGGCTCTGCTGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp CTTCAGCCCCCTTTGGGGGCATCCACATGGGCTCAGATCTTGGCTTaGCTTGGGACGGTAGTGGAGGCAGAGAGCGCAAGGGCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: LQPPLGASTWAQILA*LGTVVEAESARAFG
Trigger: GCCAAAGGCCCTTGCGCTCTCTGCCTCCACTACCGTCCCAAGCCAAGCCAAGATCTGAGCCCATGTGGATGCCCCCAAAGGGGGCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp TGTAGTCCCAGTGGTCATGGTGACAGAGGTAGAAGTGGCGGCCAGTaGGAGTGTGACCCCGGGTCACCAGAGCTGTGTGCTGGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: CSPSGHGDRGRSGGQ*ECDPGSPELCAGCL
Trigger: CAGGCACCCAGCACACAGCTCTGGTGACCCGGGGTCACACTCCCACTGGCCGCCACTTCTACCTCTGTCACCATGACCACTGGGACTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GCCCGTCTGCCAACGACTCTCGGCCGTCTGTGGGGGAAGCCTTCTTaGACAGGGTCCGTCTCAGCGTGGAGTCGAAGGGGAGAGTGTTAT +
Preference number: 5 (lower is better)
Translates to: ARLPTTLGRLWGKPS*TGSVSAWSRRGECY
Trigger: ATAACACTCTCCCCTTCGACTCCACGCTGAGACGGACCCTGTCCAAGAAGGCTTCCCCCACAGACGGCCGAGAGTCGTTGGCAGACGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp ACAGACAGGGCCCTCCAGATCTTGGTACGAGCAGAGGCAGGTGAGTaGCCGCTTCGCTCTGGCCCTGCCGGGTCTTCCTGGACCACATTT +
Preference number: 5 (lower is better)
Translates to: TDRALQILVRAEAGE*PLRSGPAGSSWTTF
Trigger: AAATGTGGTCCAGGAAGACCCGGCAGGGCCAGAGCGAAGCGGCCACTCACCTGCCTCTGCTCGTACCAAGATCTGGAGGGCCCTGTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp CAGCCTCCTGGCTCCGGACCAGCCTCTCCGGCTTCTTCCGAGGAATaGCACCCACACCTTCGGTCTCTGACTCCGCTAGGACTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: QPPGSGPASPASSEE*HPHLRSLTPLGLSL
Trigger: GAGAGAAAGTCCTAGCGGAGTCAGAGACCGAAGGTGTGGGTGCCATTCCTCGGAAGAAGCCGGAGAGGCTGGTCCGGAGCCAGGAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGATCCATGCTGCTGCTCTaGCCAGGAGAAGGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRSMLLL*PGEGGA
Trigger: AGCCCCACCTTCTCCTGGCAAGAGCAGCAGCATGGA...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACTGTTTGCTCACTGCCTaGGGCCGGCCTAGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDCLLTA*GRPSLG
Trigger: TCCCAGGCTAGGCCGGCCCAAGGCAGTGAGCAAACA...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp AGATGTCCCCTCCCCCACATCACTCATCTCCCACAGGCACAGTTCTaGCTTGGCAGCATGGGACGGAAGAGCCTCTGGGTGTGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: RCPLPHITHLPQAQF*LGSMGRKSLWVCVS
Trigger: GGAGACGCACACCCAGAGGCTCTTCCGTCCCATGCTGCCAAGGCAGAACTGTGCCTGTGGGAGATGAGTGATGTGGGGGAGGGGACATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GGCTTGGCTTGGGACGGTAGTGGAGGCAGAGAGCGCAAGGGCCTTTaGCTCCCTAGAGCCCCACTACAGAGGAAACAGCAACTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: GLAWDGSGGRERKGL*LPRAPLQRKQQLRS
Trigger: GCTCCTGAGTTGCTGTTTCCTCTGTAGTGGGGCTCTAGGGAGCCAAAGGCCCTTGCGCTCTCTGCCTCCACTACCGTCCCAAGCCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp AGAGAAAGGCCAGGGCTGCTTCAGCCCCCTTTGGGGGCATCCACATaGGCTCAGATCTTGGCTTGGCTTGGGACGGTAGTGGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: RERPGLLQPPLGAST*AQILAWLGTVVEAE
Trigger: CTCTGCCTCCACTACCGTCCCAAGCCAAGCCAAGATCTGAGCCCATGTGGATGCCCCCAAAGGGGGCTGAAGCAGCCCTGGCCTTTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GAGTACCAGCCCGGGCCGCTTGCACACTGGTTGATGTCCACACTTTaGAGGTCGATGTCCATCTGCACCTGTCCCCTGACCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: EYQPGPLAHWLMSTL*RSMSICTCPLTSGV
Trigger: CACCCCAGAGGTCAGGGGACAGGTGCAGATGGACATCGACCTCCAAAGTGTGGACATCAACCAGTGTGCAAGCGGCCCGGGCTGGTACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GAGCGGCCCAATCCCTGGTGCGAGCTGCCCCGCTTCTTGGGCAGGTaGGGGTTGTTAGCAGCCATCTCCTTGGTCTTTCGGATCTCTAAC +
Preference number: 5 (lower is better)
Translates to: ERPNPWCELPRFLGR*GLLAAISLVFRISN
Trigger: GTTAGAGATCCGAAAGACCAAGGAGATGGCTGCTAACAACCCCCACCTGCCCAAGAAGCGGGGCAGCTCGCACCAGGGATTGGGCCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp TTCCCTGTGGTGGTCATAAGTGCTGCGGGTCTTGCGGAGGGCCGGTaGCTTCTCCGTTTCTTGAAGGCTGGAGCTGAGGAGCCTTCGTCG +
Preference number: 5 (lower is better)
Translates to: FPVVVISAAGLAEGR*LLRFLKAGAEEPSS
Trigger: CGACGAAGGCTCCTCAGCTCCAGCCTTCAAGAAACGGAGAAGCCACCGGCCCTCCGCAAGACCCGCAGCACTTATGACCACCACAGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GCCTTGCCTCTGGAGAGAGGCTTGGGCTTTCTCTGTGTCTCTTTGTaGGGTGCTACCCGGGGCCATGCTCTCCCAGGGGCAGATTGCTTC +
Preference number: 5 (lower is better)
Translates to: ALPLERGLGFLCVSL*GATRGHALPGADCF
Trigger: GAAGCAATCTGCCCCTGGGAGAGCATGGCCCCGGGTAGCACCCCACAAAGAGACACAGAGAAAGCCCAAGCCTCTCTCCAGAGGCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GTCCCATCCCCGGTGCTGACCAAGGGCTGGGAGCTAACTCTAGGTTaGTCAGGGCACTGGATGTGTGGATGGGAGGAAGAGCCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: VPSPVLTKGWELTLG*SGHWMCGWEEEPAS
Trigger: ACTGGCAGGCTCTTCCTCCCATCCACACATCCAGTGCCCTGACCAACCTAGAGTTAGCTCCCAGCCCTTGGTCAGCACCGGGGATGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp CATGGGCACACCTCAGCAGTCCCATCCCCGGTGCTGACCAAGGGCTaGGAGCTAACTCTAGGTTGGTCAGGGCACTGGATGTGTGGATGG +
Preference number: 5 (lower is better)
Translates to: HGHTSAVPSPVLTKG*ELTLGWSGHWMCGW
Trigger: CCATCCACACATCCAGTGCCCTGACCAACCTAGAGTTAGCTCCCAGCCCTTGGTCAGCACCGGGGATGGGACTGCTGAGGTGTGCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp AACCTCAGTCCCCACTTCCCAGGGACAGATCTCAGCAGCTCTGCCTaGCACGCTGCCTTGCCTCTGGAGAGAGGCTTGGGCTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: NLSPHFPGTDLSSSA*HAALPLERGLGFLC
Trigger: ACAGAGAAAGCCCAAGCCTCTCTCCAGAGGCAAGGCAGCGTGGCAGGCAGAGCTGCTGAGATCTGTCCCTGGGAAGTGGGGACTGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp CATGGTGTGGCATCCAGACAGCTGGTGCAGCCCTCAGGACACGGCTaGCACCGTAGCAGCTTCCCTAAGCTGTCTTGTGGGGACCCAAAT +
Preference number: 5 (lower is better)
Translates to: HGVASRQLVQPSGHG*HRSSFPKLSCGDPN
Trigger: ATTTGGGTCCCCACAAGACAGCTTAGGGAAGCTGCTACGGTGCCAGCCGTGTCCTGAGGGCTGCACCAGCTGTCTGGATGCCACACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GTGGGTGAGGCAGCCTTCTCCCAGCCTCTTCATGAGGCCTCGCAGTaGTTTGAGAGCTGTCCATGCTGCTGCTCTTGCCAGGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: VGEAAFSQPLHEASQ*FESCPCCCSCQEKV
Trigger: CACCTTCTCCTGGCAAGAGCAGCAGCATGGACAGCTCTCAAACCACTGCGAGGCCTCATGAAGAGGCTGGGAGAAGGCTGCCTCACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp TTGCCCTCACGGTTTGCTCCCCCGACTCTGCTAAGCATCCCTTTCTaGAGGGAGTCTCCTTTCCTGGGAGAGACTTCCCATCTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: LPSRFAPPTLLSIPF*RESPFLGETSHLPP
Trigger: CGGGGGCAGATGGGAAGTCTCTCCCAGGAAAGGAGACTCCCTCCAGAAAGGGATGCTTAGCAGAGTCGGGGGAGCAAACCGTGAGGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GGAGTTTCTCACCGGCCTTGGAGGAAGCTTTGTCTGGCTGTGGGCTaGACCGCTCAGGGGCTTCATCCTCCCAAGGGCATACTGACTCCT +
Preference number: 5 (lower is better)
Translates to: GVSHRPWRKLCLAVG*TAQGLHPPKGILTP
Trigger: AGGAGTCAGTATGCCCTTGGGAGGATGAAGCCCCTGAGCGGTCCAGCCCACAGCCAGACAAAGCTTCCTCCAAGGCCGGTGAGAAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACAGCATGTTGAGAAAGTaGGCAGCCTGGGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDSMLRK*AAWARV
Trigger: CACCCTGGCCCAGGCTGCCAACTTTCTCAACATGCT...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGATGCTGCAGAGGGGTCTaGAGGCTGTGGGATTTTGAG +
Preference number: 5 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRCCRGV*RLWDFE
Trigger: CTCAAAATCCCACAGCCTCAAGACCCCTCTGCAGCA...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACAGGCACAGTTCTGCCTaGGCAGCATGGGACGGAAGA +
Preference number: 5 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDRHSSA*AAWDGR
Trigger: TCTTCCGTCCCATGCTGCCAAGGCAGAACTGTGCCT...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GATGTCCCAGCCCGTCCTCTATGGGACCACGTGTCAGGGAAAGGGGTGGGGAGATCTCCCAGGGGCAGATaGCTTCCTGCTTTTGGATCC +
Preference number: 5 (lower is better)
Translates to: DVPARPLWDHVSGKGVGRSPRGR*LPAFGS
Trigger: GGATCCAAAAGCAGGAAGCAATCTGCCCCTGGGAGA...TCTCCCCACCCCTTTCCCTGACACGTGGTCCCATAGAGGACGGGCTGGGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 90 bp CAGAGGGACACACTGGGTGCTGTTGAGGTCGCACAGGTGTGTGTTTaGGTACCAGCCCGGGCCGCTTGCACACTGGTTGATGTCCACACT +
Preference number: 5 (lower is better)
Translates to: QRDTLGAVEVAQVCV*VPARAACTLVDVHT
Trigger: AGTGTGGACATCAACCAGTGTGCAAGCGGCCCGGGCTGGTACTCAAACACACACCTGTGCGACCTCAACAGCACCCAGTGTGTCCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp AGGGTTAAAGGTCAGCAGAGCCCTGTAGGCTTTCGGGTCTCCCTCTaGCACACTGCGAACAAGCGCCTGATACCACTCCACGTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RVKGQQSPVGFRVSL*HTANKRLIPLHVLL
Trigger: GAGGAGGACGTGGAGTGGTATCAGGCGCTTGTTCGCAGTGTGGCAGAGGGAGACCCGAAAGCCTACAGGGCTCTGCTGACCTTTAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp CCTCTTCATGAGGCCTCGCAGTGGTTTGAGAGCTGTCCATGCTGCTaGTCTTGCCAGGAGAAGGTGGGGCTGACAGAGGAGCCCTTAGAG +
Preference number: 5 (lower is better)
Translates to: PLHEASQWFESCPCC*SCQEKVGLTEEPLE
Trigger: CTCTAAGGGCTCCTCTGTCAGCCCCACCTTCTCCTGGCAAGAGCAGCAGCATGGACAGCTCTCAAACCACTGCGAGGCCTCATGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp CAGCCTCTTCATGAGGCCTCGCAGTGGTTTGAGAGCTGTCCATGCTaGTGCTCTTGCCAGGAGAAGGTGGGGCTGACAGAGGAGCCCTTA +
Preference number: 5 (lower is better)
Translates to: QPLHEASQWFESCPC*CSCQEKVGLTEEPL
Trigger: TAAGGGCTCCTCTGTCAGCCCCACCTTCTCCTGGCAAGAGCAGCAGCATGGACAGCTCTCAAACCACTGCGAGGCCTCATGAAGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp ACTTCCCAGGGACAGATCTCAGCAGCTCTGCCTGCCACGCTGCCTTaGCTCTGGAGAGAGGCTTGGGCTTTCTCTGTGTCTCTTTGTGGG +
Preference number: 5 (lower is better)
Translates to: TSQGQISAALPATLP*LWREAWAFSVSLCG
Trigger: CCCACAAAGAGACACAGAGAAAGCCCAAGCCTCTCTCCAGAGGCAAGGCAGCGTGGCAGGCAGAGCTGCTGAGATCTGTCCCTGGGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp TCCCCACTTCCCAGGGACAGATCTCAGCAGCTCTGCCTGCCACGCTaGCTTGCCTCTGGAGAGAGGCTTGGGCTTTCTCTGTGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: SPLPRDRSQQLCLPR*LASGERLGLSLCLF
Trigger: AAAGAGACACAGAGAAAGCCCAAGCCTCTCTCCAGAGGCAAGGCAGCGTGGCAGGCAGAGCTGCTGAGATCTGTCCCTGGGAAGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp AACATCTCCAGAGTAGAGAAAGGCCAGGGCTGCTTCAGCCCCCTTTaGGGGCATCCACATGGGCTCAGATCTTGGCTTGGCTTGGGACGG +
Preference number: 5 (lower is better)
Translates to: NISRVEKGQGCFSPL*GHPHGLRSWLGLGR
Trigger: CCGTCCCAAGCCAAGCCAAGATCTGAGCCCATGTGGATGCCCCCAAAGGGGGCTGAAGCAGCCCTGGCCTTTCTCTACTCTGGAGATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp CAGAATAGGAGCCAATGTGGAGGCCGGAGTGGGAGACAACATTCTTaGCTCTCCCAGGCAGATCCCGGACAGAGCCAAGACCGGTGTGGA +
Preference number: 5 (lower is better)
Translates to: QNRSQCGGRSGRQHS*LSQADPGQSQDRCG
Trigger: TCCACACCGGTCTTGGCTCTGTCCGGGATCTGCCTGGGAGAGCCAAGAATGTTGTCTCCCACTCCGGCCTCCACATTGGCTCCTATTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GAGGCAGGTGAGTGGCCGCTTCGCTCTGGCCCTGCCGGGTCTTCCTaGACCACATTTTCTTTCTTGCCTGGAAGTTCTGCATTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: EAGEWPLRSGPAGSS*TTFSFLPGSSAFSQ
Trigger: CTGGGAGAATGCAGAACTTCCAGGCAAGAAAGAAAATGTGGTCCAGGAAGACCCGGCAGGGCCAGAGCGAAGCGGCCACTCACCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp CCCACATCACTCATCTCCCACAGGCACAGTTCTGCCTTGGCAGCATaGGACGGAAGAGCCTCTGGGTGTGCGTCTCCTTTGCTCACTACC +
Preference number: 5 (lower is better)
Translates to: PTSLISHRHSSALAA*DGRASGCASPLLTT
Trigger: GGTAGTGAGCAAAGGAGACGCACACCCAGAGGCTCTTCCGTCCCATGCTGCCAAGGCAGAACTGTGCCTGTGGGAGATGAGTGATGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp CAAGGGCTGGGAGCTAACTCTAGGTTGGTCAGGGCACTGGATGTGTaGATGGGAGGAAGAGCCTGCCAGTACCATGCCTTCCTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: QGLGANSRLVRALDV*MGGRACQYHAFLQA
Trigger: AGCCTGCAGGAAGGCATGGTACTGGCAGGCTCTTCCTCCCATCCACACATCCAGTGCCCTGACCAACCTAGAGTTAGCTCCCAGCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GTGCTGACCAAGGGCTGGGAGCTAACTCTAGGTTGGTCAGGGCACTaGATGTGTGGATGGGAGGAAGAGCCTGCCAGTACCATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: VLTKGWELTLGWSGH*MCGWEEEPASTMPS
Trigger: GGAAGGCATGGTACTGGCAGGCTCTTCCTCCCATCCACACATCCAGTGCCCTGACCAACCTAGAGTTAGCTCCCAGCCCTTGGTCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 90 bp GTGGCAGAGACTGTGACTAGCCAGCCAGGACGGAGCTGGCCCTCATaGCATTCCAGGAAAGGGGGAGATAGCTTCACCTGCTGTATGTCC +
Preference number: 5 (lower is better)
Translates to: VAETVTSQPGRSWPS*HSRKGGDSFTCCMS
Trigger: GGACATACAGCAGGTGAAGCTATCTCCCCCTTTCCTGGAATGTCATGAGGGCCAGCTCCGTCCTGGCTGGCTAGTCACAGTCTCTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 90 bp ACAGGTGTGTGTTTGAGTACCAGCCCGGGCCGCTTGCACACTGGTTaGTGTCCACACTTTGGAGGTCGATGTCCATCTGCACCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: TGVCLSTSPGRLHTG*CPHFGGRCPSAPVP
Trigger: GGGGACAGGTGCAGATGGACATCGACCTCCAAAGTGTGGACATCAACCAGTGTGCAAGCGGCCCGGGCTGGTACTCAAACACACACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 90 bp GGACTGTCCTTCTACTCCCTGACCAACAGTGCTGAGGGGCAAGTCTaGGACCTTGGGGACCTGGGCAGGTGGTTTCCAAGGACAGATAGC +
Preference number: 5 (lower is better)
Translates to: GLSFYSLTNSAEGQV*DLGDLGRWFPRTDS
Trigger: GCTATCTGTCCTTGGAAACCACCTGCCCAGGTCCCCAAGGTCTCAGACTTGCCCCTCAGCACTGTTGGTCAGGGAGTAGAAGGACAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 90 bp GAGGAAGAGCCTGCCAGTACCATGCCTTCCTGCAGGCTTATAGGCTaGAGTTCCGAGCTTGCTCCTCCCCCATCGACAGGAACCACTTGG +
Preference number: 5 (lower is better)
Translates to: EEEPASTMPSCRLIG*SSELAPPPSTGTTW
Trigger: CCAAGTGGTTCCTGTCGATGGGGGAGGAGCAAGCTCGGAACTTCAGCCTATAAGCCTGCAGGAAGGCATGGTACTGGCAGGCTCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACGCTTGTAGGAGCATGTaGAGAAAGTTGGCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDACRSM*RKLAAW
Trigger: CCAGGCTGCCAACTTTCTCAACATGCTCCTACAAGC...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CCATGGCGTTGTACACCTGTGATCCTGGACCCCAGGAAGTGGAGGCAGGAGGACGTTCTCCCCAGAAGGTaGCCTTCTTGGGGGATTTCT +
Preference number: 5 (lower is better)
Translates to: PWRCTPVILDPRKWRQEDVLPRR*PSWGIS
Trigger: AGAAATCCCCCAAGAAGGCAACCTTCTGGGGAGAAC...GTCCTCCTGCCTCCACTTCCTGGGGTCCAGGATCACAGGTGTACAACGCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp TCGCACAGGTGTGTGTTTGAGTACCAGCCCGGGCCGCTTGCACACTaGTTGATGTCCACACTTTGGAGGTCGATGTCCATCTGCACCTGT +
Preference number: 5 (lower is better)
Translates to: SHRCVFEYQPGPLAH*LMSTLWRSMSICTC
Trigger: ACAGGTGCAGATGGACATCGACCTCCAAAGTGTGGACATCAACCAGTGTGCAAGCGGCCCGGGCTGGTACTCAAACACACACCTGTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp CTTGCTCTCGGCTGCCCTCCTTTTGACAAACGTGGAGCATGCGGCTaGTGTGAGCGTTCTGTTGGTTCTGGAGGGACTCTTCATCTTCGC +
Preference number: 5 (lower is better)
Translates to: LALGCPPFDKRGACG*CERSVGSGGTLHLR
Trigger: GCGAAGATGAAGAGTCCCTCCAGAACCAACAGAACGCTCACACCAGCCGCATGCTCCACGTTTGTCAAAAGGAGGGCAGCCGAGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp CTTCATCCTCCCAAGGGCATACTGACTCCTGTCCTTGAGGGACTGTaGGTTTTGCCCTCACGGTTTGCTCCCCCGACTCTGCTAAGCATC +
Preference number: 5 (lower is better)
Translates to: LHPPKGILTPVLEGL*VLPSRFAPPTLLSI
Trigger: GATGCTTAGCAGAGTCGGGGGAGCAAACCGTGAGGGCAAAACCCACAGTCCCTCAAGGACAGGAGTCAGTATGCCCTTGGGAGGATGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp ACCGAGAGACAGACTGATTTCTCAGGGGCAGCTGGCACACCTGCCTaGGTTACTGGTAAAGCCAGGGGGCCAGATTCATCAGATTGGGCT +
Preference number: 5 (lower is better)
Translates to: TERQTDFSGAAGTPA*VTGKARGPDSSDWA
Trigger: AGCCCAATCTGATGAATCTGGCCCCCTGGCTTTACCAGTAACCCAGGCAGGTGTGCCAGCTGCCCCTGAGAAATCAGTCTGTCTCTCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATCTGCTTCAGCCCCCTTaGGGGGCATCCACATGGGCT +
Preference number: 5 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYLLQPP*GASTWA
Trigger: AGCCCATGTGGATGCCCCCAAAGGGGGCTGAAGCAG...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGCGCACAGGTGTGTGTTaGAGTACCAGCCCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFERTGVC*STSPGR
Trigger: GCGGCCCGGGCTGGTACTCAAACACACACCTGTGCG...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 90 bp AGAGGAAGCTGCCCCAACAAAGCAGCAGCATTTCCGCCACAACCATaGTGTAGTCCCAGTGGTCATGGTGACAGAGGTAGAAGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: RGSCPNKAAAFPPQP*CSPSGHGDRGRSGG
Trigger: GCCGCCACTTCTACCTCTGTCACCATGACCACTGGGACTACATCATGGTTGTGGCGGAAATGCTGCTGCTTTGTTGGGGCAGCTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp GGTCAGTACTCGCTTCTGGAGGACAGGACGATCCAGATCCTCTCCTaGAGTCTCTTCCTGTACCTTGTTCCCAGAGAGGTCCTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: GQYSLLEDRTIQILS*SLFLYLVPREVLKD
Trigger: GTCCTTCAGGACCTCTCTGGGAACAAGGTACAGGAAGAGACTCCAGGAGAGGATCTGGATCGTCCTGTCCTCCAGAAGCGAGTACTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp TTGACTGCTTCCCAAGGACACACTTGCAGTACCTGGCTACCCCCATaGCTTAGGAGTTTCTCACCGGCCTTGGAGGAAGCTTTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: LTASQGHTCSTWLPP*LRSFSPALEEALSG
Trigger: GCCAGACAAAGCTTCCTCCAAGGCCGGTGAGAAACTCCTAAGCCATGGGGGTAGCCAGGTACTGCAAGTGTGTCCTTGGGAAGCAGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGTTCCTCCAGGTAGGCTaGACTGGCCACCAGCAGCGC +
Preference number: 5 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFEFLQVG*TGHQQR
Trigger: GCGCTGCTGGTGGCCAGTCAAGCCTACCTGGAGGAA...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTGATTGCTTCCTGCTTTaGGATCCGCCCCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: PLPKLESQVVISRFVLAVDCFLL*DPPLSL
Trigger: GAGGCTGAGGGGCGGATCCAAAAGCAGGAAGCAATC...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGATCTGGGCGGACACTCTaGCTCTCTGGGAGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERSGRTL*LSGRKL
Trigger: GAGCTTTCTCCCAGAGAGCAAGAGTGTCCGCCCAGA...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp GGACCCCGGCTTTGCCTTCCGCCCCACGGACTTCATATTTCTCACTaGAGTTTGCTCCTGACAGCCGTTGAACATCTCCAGAGTAGAGAA +
Preference number: 5 (lower is better)
Translates to: GPRLCLPPHGLHISH*SLLLTAVEHLQSRE
Trigger: TTCTCTACTCTGGAGATGTTCAACGGCTGTCAGGAGCAAACTGCAGTGAGAAATATGAAGTCCGTGGGGCGGAAGGCAAAGCCGGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp TTTTCCTCTGGCTTGACTGCTTCCCAAGGACACACTTGCAGTACCTaGCTACCCCCATGGCTTAGGAGTTTCTCACCGGCCTTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: FSSGLTASQGHTCST*LPPWLRSFSPALEE
Trigger: TTCCTCCAAGGCCGGTGAGAAACTCCTAAGCCATGGGGGTAGCCAGGTACTGCAAGTGTGTCCTTGGGAAGCAGTCAAGCCAGAGGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGACCGCTTGCACACTGGTaGATGTCCACACTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERPLAHW*MSTLWR
Trigger: CCTCCAAAGTGTGGACATCAACCAGTGTGCAAGCGG...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TTGGGAACACTGGAACACAGGAAGTGTCCTGAAGGAGTTCTGACCCCCACCAGGCTTGTTCCTATCTTCTaGCTCTCGGCTGCCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LGTLEHRKCPEGVLTPTRLVPIF*LSAALL
Trigger: AAGGAGGGCAGCCGAGAGCAAGAAGATAGGAACAAG...CCTGGTGGGGGTCAGAACTCCTTCAGGACACTTCCTGTGTTCCAGTGTTCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCGCCTTGGAGGAAGCTTaGTCTGGCTGTGGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: FSEALSLFSDFACGLLVLALEEA*SGCGLD
Trigger: GTCCAGCCCACAGCCAGACAAAGCTTCCTCCAAGGC...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACGCCTGCCACGCTGCCTaGCCTCTGGAGAGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYACHAA*PLERGL
Trigger: CAAGCCTCTCTCCAGAGGCAAGGCAGCGTGGCAGGC...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGACTTTCCCTGGGCTGCTaGCTCCATGAAGACCAACCT +
Preference number: 5 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERLSLGC*LHEDQP
Trigger: AGGTTGGTCTTCATGGAGCAAGCAGCCCAGGGAAAG...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp TATCTTCTTGCTCTCGGCTGCCCTCCTTTTGACAAACGTGGAGCATaGGGCTGGTGTGAGCGTTCTGTTGGTTCTGGAGGGACTCTTCAT +
Preference number: 5 (lower is better)
Translates to: YLLALGCPPFDKRGA*GWCERSVGSGGTLH
Trigger: ATGAAGAGTCCCTCCAGAACCAACAGAACGCTCACACCAGCCGCATGCTCCACGTTTGTCAAAAGGAGGGCAGCCGAGAGCAAGAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp GAAGAGCCTCTGGGTGTGCGTCTCCTTTGCTCACTACCACAAACCTaGCCCCAGTTCTGTCAGACTCCTGATGCACTAATTGAGGAGACA +
Preference number: 5 (lower is better)
Translates to: EEPLGVRLLCSLPQT*PQFCQTPDALIEET
Trigger: TGTCTCCTCAATTAGTGCATCAGGAGTCTGACAGAACTGGGGGCAGGTTTGTGGTAGTGAGCAAAGGAGACGCACACCCAGAGGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp CACTTTCTCAGAACCGCCTTTGCTTCCATCAGAAGCATCTGTAGCTaGTTGCACCCCAAAGTCCTGACTCTCCCTGGGACACACAGCTTC +
Preference number: 5 (lower is better)
Translates to: HFLRTAFASIRSICS*LHPKVLTLPGTHSF
Trigger: GAAGCTGTGTGTCCCAGGGAGAGTCAGGACTTTGGGGTGCAAGCAGCTACAGATGCTTCTGATGGAAGCAAAGGCGGTTCTGAGAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp TTGGGACTGTCAAGGCTCCTTAGGTCATTGGTCAGTACTCGCTTCTaGAGGACAGGACGATCCAGATCCTCTCCTGGAGTCTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: LGLSRLLRSLVSTRF*RTGRSRSSPGVSSC
Trigger: ACAGGAAGAGACTCCAGGAGAGGATCTGGATCGTCCTGTCCTCCAGAAGCGAGTACTGACCAATGACCTAAGGAGCCTTGACAGTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCGGCTCAGATCTTGGCTaGGCTTGGGACGGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: FSEALSLFSDFACGLLVLGSDLG*AWDGSG
Trigger: TCCACTACCGTCCCAAGCCAAGCCAAGATCTGAGCC...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACGAGCTGCCCCGCTTCTaGGGCAGGTGGGGGTTGTTA +
Preference number: 5 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYELPRF*GRWGLL
Trigger: TAACAACCCCCACCTGCCCAAGAAGCGGGGCAGCTC...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATTGGGAGACAACATTCTaGGCTCTCCCAGGCAGATCC +
Preference number: 5 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYWETTF*ALPGRS
Trigger: GGATCTGCCTGGGAGAGCCAAGAATGTTGTCTCCCA...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TGGGCCCAGGAAGTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAGGTGTGAGCGTTCTGTaGGTTCTGGAGGGACTCTTC +
Preference number: 5 (lower is better)
Translates to: WAQEVPKLSLSQLFGNTGGVSVL*VLEGLF
Trigger: GAAGAGTCCCTCCAGAACCAACAGAACGCTCACACC...TCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTACTTCCTGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTGACTGGAGGGCAGGGTaGGGCACCTCTTGGTATCCC +
Preference number: 5 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSDWRAG*GTSWYP
Trigger: GGGATACCAAGAGGTGCCCAACCCTGCCCTCCAGTC...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TGGGCCCAGGAAGTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGATGTCCTGGTCTCTGGTaGTCCATCTACTTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: WAQEVPKLSLSQLFGNTGCPGLW*SIYFPG
Trigger: CCCTGGGAAGTAGATGGACAACCAGAGACCAGGACA...TCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTACTTCCTGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTACCCATCTTCAGGTCTaGTCTCAGCTCTCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: PLPKLESQVVISRFVLAVTHLQV*SQLSLL
Trigger: GAGAAGGGAGAGCTGAGACAAGACCTGAAGATGGGT...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TGGGCCCAGGAAGTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGACCGTTTCTGTGGGGCTaGGCTTTGGAACTGACTTGG +
Preference number: 5 (lower is better)
Translates to: WAQEVPKLSLSQLFGNTGPFLWG*ALELTW
Trigger: CCAAGTCAGTTCCAAAGCCAAGCCCCACAGAAACGG...TCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTACTTCCTGGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 90 bp GAAAGACTCTGGAGCCTCCGTTTCTGTGGGGCTTGGCTTTGGAACTaGCTTGGCTCCAGTCTCAAGCTCCAAAGGTTCTTGTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: ERLWSLRFCGAWLWN*LGSSLKLQRFLFSD
Trigger: GTCAGAGAACAAGAACCTTTGGAGCTTGAGACTGGAGCCAAGTCAGTTCCAAAGCCAAGCCCCACAGAAACGGAGGCTCCAGAGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGACACACTGGGTGCTGTaGAGGTCGCACAGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVTHWVL*RSHRCV
Trigger: CACACACCTGTGCGACCTCAACAGCACCCAGTGTGT...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACGCCCGGCAGCTTGTGTaGCACTCTCTTCTAAGCCCC +
Preference number: 5 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYARQLV*HSLLSP
Trigger: GGGGCTTAGAAGAGAGTGCAACACAAGCTGCCGGGC...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCGGCTTTGAGGGGGTTTaGAGACTGGTGCCAGAACAG +
Preference number: 5 (lower is better)
Translates to: FSEALSLFSDFACGLLVLGFEGV*RLVPEQ
Trigger: CTGTTCTGGCACCAGTCTCAAAACCCCCTCAAAGCC...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGGCCTCTTCCTGTGCTTaGATCCTTGCTCTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQASSCA*ILALPG
Trigger: GCCGGGGAGAGCAAGGATCAAAGCACAGGAAGAGGC...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CGATTTTGCATGTGGACTCCTGGTTCTCCCACCAGGCATTTGGTCTCATTTGAGCCTCTGGAGAGAGGCTaGGGCTTTCTCTGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: RFCMWTPGSPTRHLVSFEPLERG*GFLCVS
Trigger: AGAGACACAGAGAAAGCCCAAGCCTCTCTCCAGAGG...CTCAAATGAGACCAAATGCCTGGTGGGAGAACCAGGAGTCCACATGCAAAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CGATTAGTATTCCTGAGGGTTCGGGTCCCAGCACCACAGGTACCCACAGAAAGATCCTGCTTCCCAAAGTaGCTGGTCTGTGGCATTTTC +
Preference number: 5 (lower is better)
Translates to: RLVFLRVRVPAPQVPTERSCFPK*LVCGIF
Trigger: GAAAATGCCACAGACCAGCAACTTTGGGAAGCAGGA...TCTTTCTGTGGGTACCTGTGGTGCTGGGACCCGAACCCTCAGGAATACTAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp AACTTAGGGATGAAGATCAGAGCAAGTGTGGCTGTGACTGTACTGTaGGTATGGAGGAAGAAGAGGAGAAGTGTCCAGTCTGGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: NLGMKIRASVAVTVL*VWRKKRRSVQSGCR
Trigger: CCTGCACCCAGACTGGACACTTCTCCTCTTCTTCCTCCATACCCACAGTACAGTCACAGCCACACTTGCTCTGATCTTCATCCCTAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGAGTTTCTCACCGGCCTaGGAGGAAGCTTTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: MRSSEAETEESGQKTRPLSFSPA*EEALSG
Trigger: GCCAGACAAAGCTTCCTCCAAGGCCGGTGAGAAACT...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CCCCTCCCCAAGCTGGAGTCACAAGTGGTTATAAGCCGATTTGTCTTGGCCGTTATCGACAGGAACCACTaGGGTTATGTATTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: PLPKLESQVVISRFVLAVIDRNH*GYVFWE
Trigger: CTCCCAGAATACATAACCCAAGTGGTTCCTGTCGAT...AACGGCCAAGACAAATCGGCTTATAACCACTTGTGACTCCAGCTTGGGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGGGAGCTAACTCTAGGTaGGTCAGGGCACTGGATGTG +
Preference number: 5 (lower is better)
Translates to: MRSSEAETEESGQKTRPLGANSR*VRALDV
Trigger: CACATCCAGTGCCCTGACCAACCTAGAGTTAGCTCC...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGGAGAGCAGTAGCTCATaGTGCAGGGCAATGCTCATG +
Preference number: 5 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVESSSS*CRAMLM
Trigger: CATGAGCATTGCCCTGCACAATGAGCTACTGCTCTC...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACCCCGGGGCCACTCTCTaGTTCCTATCTTCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYPGATL*FLSSCS
Trigger: AGAGCAAGAAGATAGGAACAAGAGAGTGGCCCCGGG...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TGGGCCCAGGAAGTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGATCTGCCATGGTACCCTaGATTTTATTTCCTTCCGGG +
Preference number: 5 (lower is better)
Translates to: WAQEVPKLSLSQLFGNTGSAMVP*ILFPSG
Trigger: CCCGGAAGGAAATAAAATCAAGGGTACCATGGCAGA...TCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTACTTCCTGGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 90 bp CCATCTACTTCCCAGGGACAGATTTCTGCTGTTGAAAGTGTTGCTTaGTTTTCCTCTGGCTTGACTGCTTCCCAAGGACACACTTGCAGT +
Preference number: 5 (lower is better)
Translates to: PSTSQGQISAVESVA*FSSGLTASQGHTCS
Trigger: ACTGCAAGTGTGTCCTTGGGAAGCAGTCAAGCCAGAGGAAAAGCAAGCAACACTTTCAACAGCAGAAATCTGTCCCTGGGAAGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCTTTCCTCTCTCTCTTTaGCCTGCCGATAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: FSEALSLFSDFACGLLVLFPLSL*PADRFP
Trigger: AGGAAACCTATCGGCAGGCAAAAGAGAGAGAGGAAA...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACGGGGGATTCCTTCGCTaGTTCAGCATTTTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYGGFLR*FSIFLP
Trigger: GGGGAGAAAAATGCTGAACAAGCGAAGGAATCCCCC...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TTAGCCTGCTTGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATTACTTAGGACTTGTCTaGATGGCTTCTTCTCAAGGC +
Preference number: 5 (lower is better)
Translates to: LACLSSPPSPSLKLEPLYYLGLV*MASSQG
Trigger: GCCTTGAGAAGAAGCCATCAAGACAAGTCCTAAGTA...ATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACAAGCAGGCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGCAGAAGGTTGCCTTCTaGGGGGATTTCTGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVQKVAF*GDFCLS
Trigger: AGAAAGGCAGAAATCCCCCAAGAAGGCAACCTTCTG...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGTGCTTTTCCTCTGGCTaGACTGCTTCCCAAGGACAC +
Preference number: 5 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQCFSSG*TASQGH
Trigger: GTGTCCTTGGGAAGCAGTCAAGCCAGAGGAAAAGCA...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGGCCTCTCTGACTTTTTaGGAGCACTGGCAGCTACCT +
Preference number: 5 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQASLTF*EHWQLP
Trigger: AGGTAGCTGCCAGTGCTCCAAAAAAGTCAGAGAGGC...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGTCCCAGGGACAGATCTaGGCTTTTTCACCAGTAGGA +
Preference number: 5 (lower is better)
Translates to: MRSSEAETEESGQKTRPLSQGQI*AFSPVG
Trigger: TCCTACTGGTGAAAAAGCCAAGATCTGTCCCTGGGA...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GTTAGAGTCAAGTTCTTGCTTGAGAACCAGAGATTCCTCCTTGGCACCAGTTACAAGCTCCAAAGGTTCTaGTTCTCTGACGCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: VRVKFLLENQRFLLGTSYKLQRF*FSDAFR
Trigger: CCGGAAGGCGTCAGAGAACAAGAACCTTTGGAGCTT...GTAACTGGTGCCAAGGAGGAATCTCTGGTTCTCAAGCAAGAACTTGACTCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 90 bp CCTCATCTTTGTGAACTTCTCCTTTTGATGGGTGTTCTGATGTCCTaGTCTCTGGTTGTCCATCTACTTCCCAGGGACAGATTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: PHLCELLLLMGVLMS*SLVVHLLPRDRFLL
Trigger: CAGCAGAAATCTGTCCCTGGGAAGTAGATGGACAACCAGAGACCAGGACATCAGAACACCCATCAAAAGGAGAAGTTCACAAAGATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp CATCTCATCTTTCATCCTGAACTACATGGCCTTATAGCCTTCTCTTGCCCACAGGTTGATGTCCACACTTaGGAGGTCGATGTCCATCTG +
Preference number: 5 (lower is better)
Translates to: HLIFHPELHGLIAFSCPQVDVHT*EVDVHL
Trigger: CAGATGGACATCGACCTCCAAAGTGTGGACATCAAC...CTGTGGGCAAGAGAAGGCTATAAGGCCATGTAGTTCAGGATGAAAGATGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGTTTCTCCCCAAAAACTaGCCTCAGTGTGGTCATCGT +
Preference number: 5 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVFLPKN*PQCGHR
Trigger: ACGATGACCACACTGAGGCAAGTTTTTGGGGAGAAA...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCCAGACCTCAGCTTTCTaGTCATTAGCTATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: FSEALSLFSDFACGLLVLQTSAF*SLAMFS
Trigger: GGAGAACATAGCTAATGACAAGAAAGCTGAGGTCTG...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp GTACCCAAGCTATCTTTGAGTCAGCTCTTTGGGAACACTGGAACACAGGAAGTGCTGCTGTTGAAAGTGTaGCTTGCTTTTCCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: VPKLSLSQLFGNTGTQEVLLLKV*LAFPLA
Trigger: AGCCAGAGGAAAAGCAAGCAACACTTTCAACAGCAG...CACTTCCTGTGTTCCAGTGTTCCCAAAGAGCTGACTCAAAGATAGCTTGGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp ATGAGAAGTAGTGAAGCAGAAACGGAAGAGTCAGGTCAAAAGACACGCCCCTTGCAGATCTCAGCTTCCTaGATAGAAGGGACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: MRSSEAETEESGQKTRPLQISAS*IEGTSS
Trigger: AGAAGAGGTCCCTTCTATCAAGGAAGCTGAGATCTG...CAAGGGGCGTGTCTTTTGACCTGACTCTTCCGTTTCTGCTTCACTACTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TTCTCTGAGGCTCTGAGTCTGTTCAGCGATTTTGCATGTGGACTCCTGGTTCTCGACAGATTTCTGCTGTaGAAAGTGTTGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: FSEALSLFSDFACGLLVLDRFLL*KVLLAF
Trigger: AAAAGCAAGCAACACTTTCAACAGCAGAAATCTGTC...GAGAACCAGGAGTCCACATGCAAAATCGCTGAACAGACTCAGAGCCTCAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS-3UTR CAA 90 bp TGTCTTCACCCCCATCTCCCTCTCTCAAGCTGGAACCTCTGTATAAGTTTTTCTGATTTTGAGAAGACCTaGGGCTTTTCCTCATCTGTA +
Preference number: 5 (lower is better)
Translates to: CLHPHLPLSSWNLCISFSDFEKT*GFSSSV
Trigger: TACAGATGAGGAAAAGCCCAAGGTCTTCTCAAAATC...AGAAAAACTTATACAGAGGTTCCAGCTTGAGAGAGGGAGATGGGGGTGAAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CGCAGGGGGCGAGGGCAACCTGTTTGCTCACTGCCTTaGGCCGGCCTAGCCTGGGAGATCGGAGTGGAGCCC +
Preference number: 6 (lower is better)
Translates to: RRGRGQPVCSLP*AGLAWEIGVEP
Trigger: GGGCTCCACTCCGATCTCCCAGGCTAGGCCGGCCCAAGGCAGTGAGCAAACAGGTTGCCCTCGCCCCCTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp ACTGGCAGACCTGAAGCCCAGGGCTGGGGGCCCGTCTaGCAACGACTCTCGGCCGTCTGTGGGGGAAGCCTT +
Preference number: 6 (lower is better)
Translates to: TGRPEAQGWGPV*QRLSAVCGGSL
Trigger: AAGGCTTCCCCCACAGACGGCCGAGAGTCGTTGGCAGACGGGCCCCCAGCCCTGGGCTTCAGGTCTGCCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CTGGGGGCCCGTCTGCCAACGACTCTCGGCCGTCTGTaGGGGAAGCCTTCTTGGACAGGGTCCGTCTCAGCG +
Preference number: 6 (lower is better)
Translates to: LGARLPTTLGRL*GKPSWTGSVSA
Trigger: CGCTGAGACGGACCCTGTCCAAGAAGGCTTCCCCCACAGACGGCCGAGAGTCGTTGGCAGACGGGCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp TCGCAGGGGGCGAGGGCAACCTGTTTGCTCACTGCCTaGGGCCGGCCTAGCCTGGGAGATCGGAGTGGAGCC +
Preference number: 6 (lower is better)
Translates to: SQGARATCLLTA*GRPSLGDRSGA
Trigger: GGCTCCACTCCGATCTCCCAGGCTAGGCCGGCCCAAGGCAGTGAGCAAACAGGTTGCCCTCGCCCCCTGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp CAGGGCCCTCCAGATCTTGGTACGAGCAGAGGCAGGTaGGTGGCCGCTTCGCTCTGGCCCTGCCGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: QGPPDLGTSRGR*VAASLWPCRVF
Trigger: GAAGACCCGGCAGGGCCAGAGCGAAGCGGCCACTCACCTGCCTCTGCTCGTACCAAGATCTGGAGGGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp GACCGCCAGCATGCAACAGGCCTGGCATGCCAGCACTaGCGTCCTCAGTGCCAGGGCCTCTTCCACCAGGCA +
Preference number: 6 (lower is better)
Translates to: DRQHATGLACQH*RPQCQGLFHQA
Trigger: TGCCTGGTGGAAGAGGCCCTGGCACTGAGGACGGCAGTGCTGGCATGCCAGGCCTGTTGCATGCTGGCGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp GCCCGAGTCCCGAGAGTGCTGCCGAGCCAGGGCCTCTaGGAACTCGGCCAGGTATCTCATGAAAGAGCGGCC +
Preference number: 6 (lower is better)
Translates to: ARVPRVLPSQGL*ELGQVSHERAA
Trigger: GGCCGCTCTTTCATGAGATACCTGGCCGAGTTCCCAGAGGCCCTGGCTCGGCAGCACTCTCGGGACTCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CAGGTTGTGAGCACTGGCAGACCTGAAGCCCAGGGCTaGGGGCCCGTCTGCCAACGACTCTCGGCCGTCTGT +
Preference number: 6 (lower is better)
Translates to: QVVSTGRPEAQG*GPVCQRLSAVC
Trigger: ACAGACGGCCGAGAGTCGTTGGCAGACGGGCCCCCAGCCCTGGGCTTCAGGTCTGCCAGTGCTCACAACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp GCCCTCCAGATCTTGGTACGAGCAGAGGCAGGTGAGTaGCCGCTTCGCTCTGGCCCTGCCGGGTCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: ALQILVRAEAGE*PLRSGPAGSSW
Trigger: CCAGGAAGACCCGGCAGGGCCAGAGCGAAGCGGCCACTCACCTGCCTCTGCTCGTACCAAGATCTGGAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp GGGCCGGTGGCTTCTCCGTTTCTTGAAGGCTGGAGCTaGGGAGCCTTCGTCGGGAAGAGCCTGGCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: GPVASPFLEGWS*GAFVGKSLAGC
Trigger: GCAGCCTGCCAGGCTCTTCCCGACGAAGGCTCCTCAGCTCCAGCCTTCAAGAAACGGAGAAGCCACCGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp CCAGCAGCGCCTTTTCCCTGGAGCCAGCCGCCACACTaGGTGACTTCTGCAGGGAGATGGGCCTGGCTCGAG +
Preference number: 6 (lower is better)
Translates to: PAAPFPWSQPPH*VTSAGRWAWLE
Trigger: CTCGAGCCAGGCCCATCTCCCTGCAGAAGTCACTCAGTGTGGCGGCTGGCTCCAGGGAAAAGGCGCTGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp CCCCACTTCCCAGGGACAGATCTCAGCAGCTCTGCCTaGCACGCTGCCTTGCCTCTGGAGAGAGGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: PHFPGTDLSSSA*HAALPLERGLG
Trigger: GCCCAAGCCTCTCTCCAGAGGCAAGGCAGCGTGGCAGGCAGAGCTGCTGAGATCTGTCCCTGGGAAGTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp TCGGCCAGGTATCTCATGAAAGAGCGGCCCAATCCCTaGTGCGAGCTGCCCCGCTTCTTGGGCAGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: SARYLMKERPNP*CELPRFLGRWG
Trigger: CCCCCACCTGCCCAAGAAGCGGGGCAGCTCGCACCAGGGATTGGGCCGCTCTTTCATGAGATACCTGGCCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CTGACAGAGGAGCCCTTAGAGGCCATTCCAGCCTCCTaGTCGATGGCCTCCGCACCGGGCTCACCATGGCTG +
Preference number: 6 (lower is better)
Translates to: LTEEPLEAIPAS*SMASAPGSPWL
Trigger: CAGCCATGGTGAGCCCGGTGCGGAGGCCATCGACCAGGAGGCTGGAATGGCCTCTAAGGGCTCCTCTGTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CAACCTGTTTGCTCACTGCCTTGGGCCGGCCTAGCCTaGGAGATCGGAGTGGAGCCCCTGTGCTCACCTCGG +
Preference number: 6 (lower is better)
Translates to: QPVCSLPWAGLA*EIGVEPLCSPR
Trigger: CCGAGGTGAGCACAGGGGCTCCACTCCGATCTCCCAGGCTAGGCCGGCCCAAGGCAGTGAGCAAACAGGTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp GAGCGGCCCAATCCCTGGTGCGAGCTGCCCCGCTTCTaGGGCAGGTGGGGGTTGTTAGCAGCCATCTCCTTG +
Preference number: 6 (lower is better)
Translates to: ERPNPWCELPRF*GRWGLLAAISL
Trigger: CAAGGAGATGGCTGCTAACAACCCCCACCTGCCCAAGAAGCGGGGCAGCTCGCACCAGGGATTGGGCCGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp GGGCTGCTTCAGCCCCCTTTGGGGGCATCCACATGGGCTCAGATCTaGGCTTGGCTTGGGACGGTAGTGGAGGCAGAGAGCGCAAGGGCC +
Preference number: 6 (lower is better)
Translates to: GLLQPPLGASTWAQI*AWLGTVVEAESARA
Trigger: GGCCCTTGCGCTCTCTGCCTCCACTACCGTCCCAAGCCAAGCCAAGATCTGAGCCCATGTGGATGCCCCCAAAGGGGGCTGAAGCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp TCTTCATCTTCGCAGGGGGCGAGGGCAACCTGTTTGCTCACTGCCTaGGGCCGGCCTAGCCTGGGAGATCGGAGTGGAGCCCCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: SSSSQGARATCLLTA*GRPSLGDRSGAPVL
Trigger: GAGCACAGGGGCTCCACTCCGATCTCCCAGGCTAGGCCGGCCCAAGGCAGTGAGCAAACAGGTTGCCCTCGCCCCCTGCGAAGATGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp CGGGTCTTGCGGAGGGCCGGTGGCTTCTCCGTTTCTTaGAGGCTGGAGCTGAGGAGCCTTCGTCGGGAAGAG +
Preference number: 6 (lower is better)
Translates to: RVLRRAGGFSVS*RLELRSLRREE
Trigger: CTCTTCCCGACGAAGGCTCCTCAGCTCCAGCCTTCAAGAAACGGAGAAGCCACCGGCCCTCCGCAAGACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp CTGGCTCGAGGGAGTCTTTCTCCCACTGTCAGGTTGTaGGCACTGGCAGACCTGAAGCCCAGGGCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: LARGSLSPTVRL*ALADLKPRAGG
Trigger: GCCCCCAGCCCTGGGCTTCAGGTCTGCCAGTGCTCACAACCTGACAGTGGGAGAAAGACTCCCTCGAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp GCCAGGTATCTCATGAAAGAGCGGCCCAATCCCTGGTaGGAGCTGCCCCGCTTCTTGGGCAGGTGGGGGTTG +
Preference number: 6 (lower is better)
Translates to: ARYLMKERPNPW*ELPRFLGRWGL
Trigger: CAACCCCCACCTGCCCAAGAAGCGGGGCAGCTCGCACCAGGGATTGGGCCGCTCTTTCATGAGATACCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CGCAGCAGCTGCCCGCTACTTGGGTGTGGCACCCGCTaGGCAGTTCGAGACAGAAACAGCTGGAGCACCCTA +
Preference number: 6 (lower is better)
Translates to: RSSCPLLGCGTR*AVRDRNSWSTL
Trigger: TAGGGTGCTCCAGCTGTTTCTGTCTCGAACTGCCCAGCGGGTGCCACACCCAAGTAGCGGGCAGCTGCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CCAACGACTCTCGGCCGTCTGTGGGGGAAGCCTTCTTaGACAGGGTCCGTCTCAGCGTGGAGTCGAAGGGGA +
Preference number: 6 (lower is better)
Translates to: PTTLGRLWGKPS*TGSVSAWSRRG
Trigger: TCCCCTTCGACTCCACGCTGAGACGGACCCTGTCCAAGAAGGCTTCCCCCACAGACGGCCGAGAGTCGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp GGCTCCGGACCAGCCTCTCCGGCTTCTTCCGAGGAATaGCACCCACACCTTCGGTCTCTGACTCCGCTAGGA +
Preference number: 6 (lower is better)
Translates to: GSGPASPASSEE*HPHLRSLTPLG
Trigger: TCCTAGCGGAGTCAGAGACCGAAGGTGTGGGTGCCATTCCTCGGAAGAAGCCGGAGAGGCTGGTCCGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp GCGGGTCTTGCGGAGGGCCGGTGGCTTCTCCGTTTCTaGAAGGCTGGAGCTGAGGAGCCTTCGTCGGGAAGA +
Preference number: 6 (lower is better)
Translates to: AGLAEGRWLLRF*KAGAEEPSSGR
Trigger: TCTTCCCGACGAAGGCTCCTCAGCTCCAGCCTTCAAGAAACGGAGAAGCCACCGGCCCTCCGCAAGACCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp TCTCTGACGCCTTCCGGGCGGGAAGAGCCAGGTGGCTaGCTGATGTCTGGGCGGACACTCTTGCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: SLTPSGREEPGG*LMSGRTLLLSG
Trigger: CCCAGAGAGCAAGAGTGTCCGCCCAGACATCAGCAAGCCACCTGGCTCTTCCCGCCCGGAAGGCGTCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp CCAGTCCCCCTTTTCTCCACTGCCACAGACAGGGCCCTCCAGATCTaGGTACGAGCAGAGGCAGGTGAGTGGCCGCTTCGCTCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: PVPLFSTATDRALQI*VRAEAGEWPLRSGP
Trigger: AGGGCCAGAGCGAAGCGGCCACTCACCTGCCTCTGCTCGTACCAAGATCTGGAGGGCCCTGTCTGTGGCAGTGGAGAAAAGGGGGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp ATAAGTGCTGCGGGTCTTGCGGAGGGCCGGTGGCTTCTCCGTTTCTaGAAGGCTGGAGCTGAGGAGCCTTCGTCGGGAAGAGCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: ISAAGLAEGRWLLRF*KAGAEEPSSGRAWQ
Trigger: CTGCCAGGCTCTTCCCGACGAAGGCTCCTCAGCTCCAGCCTTCAAGAAACGGAGAAGCCACCGGCCCTCCGCAAGACCCGCAGCACTTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp TTCTGGAGGGACTCTTCATCTTCGCAGGGGGCGAGGGCAACCTGTTaGCTCACTGCCTTGGGCCGGCCTAGCCTGGGAGATCGGAGTGGA +
Preference number: 6 (lower is better)
Translates to: FWRDSSSSQGARATC*LTALGRPSLGDRSG
Trigger: TCCACTCCGATCTCCCAGGCTAGGCCGGCCCAAGGCAGTGAGCAAACAGGTTGCCCTCGCCCCCTGCGAAGATGAAGAGTCCCTCCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp TTCGGGTCTCCCTCTGCCACACTGCGAACAAGCGCCTaGTACCACTCCACGTCCTCCTCCACGCTCGACTCC +
Preference number: 6 (lower is better)
Translates to: FGSPSATLRTSA*YHSTSSSTLDS
Trigger: GGAGTCGAGCGTGGAGGAGGACGTGGAGTGGTATCAGGCGCTTGTTCGCAGTGTGGCAGAGGGAGACCCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp GGCTGCGCTCACTCCATGCCGAGGCGATGCTGCTGTTaGGGTAGGAGCCTGAGCGTTGCAGGTCCAGCTCAT +
Preference number: 6 (lower is better)
Translates to: GCAHSMPRRCCC*GRSLSVAGPAH
Trigger: ATGAGCTGGACCTGCAACGCTCAGGCTCCTACCTCAACAGCAGCATCGCCTCGGCATGGAGTGAGCGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp ACTCTTCATCTTCGCAGGGGGCGAGGGCAACCTGTTTaGTCACTGCCTTGGGCCGGCCTAGCCTGGGAGATC +
Preference number: 6 (lower is better)
Translates to: TLHLRRGRGQPV*SLPWAGLAWEI
Trigger: GATCTCCCAGGCTAGGCCGGCCCAAGGCAGTGAGCAAACAGGTTGCCCTCGCCCCCTGCGAAGATGAAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp CAGTCCCCACTTCCCAGGGACAGATCTCAGCAGCTCTaGCTGCCACGCTGCCTTGCCTCTGGAGAGAGGCTT +
Preference number: 6 (lower is better)
Translates to: QSPLPRDRSQQL*LPRCLASGERL
Trigger: AAGCCTCTCTCCAGAGGCAAGGCAGCGTGGCAGGCAGAGCTGCTGAGATCTGTCCCTGGGAAGTGGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp GGGGGCATCCACATGGGCTCAGATCTTGGCTTGGCTTaGGACGGTAGTGGAGGCAGAGAGCGCAAGGGCCTT +
Preference number: 6 (lower is better)
Translates to: GGIHMGSDLGLA*DGSGGRERKGL
Trigger: AAGGCCCTTGCGCTCTCTGCCTCCACTACCGTCCCAAGCCAAGCCAAGATCTGAGCCCATGTGGATGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp TTGCCTGCCGATAGGTTTCCTCCAGGTAGGCTTGACTaGCCACCAGCAGCGCCTTTTCCCTGGAGCCAGCCG +
Preference number: 6 (lower is better)
Translates to: LPADRFPPGRLD*PPAAPFPWSQP
Trigger: CGGCTGGCTCCAGGGAAAAGGCGCTGCTGGTGGCCAGTCAAGCCTACCTGGAGGAAACCTATCGGCAGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CAGCCCCCTTTGGGGGCATCCACATGGGCTCAGATCTaGGCTTGGCTTGGGACGGTAGTGGAGGCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: QPPLGASTWAQI*AWLGTVVEAES
Trigger: GCTCTCTGCCTCCACTACCGTCCCAAGCCAAGCCAAGATCTGAGCCCATGTGGATGCCCCCAAAGGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp GACTCTTCATCTTCGCAGGGGGCGAGGGCAACCTGTTaGCTCACTGCCTTGGGCCGGCCTAGCCTGGGAGAT +
Preference number: 6 (lower is better)
Translates to: DSSSSQGARATC*LTALGRPSLGD
Trigger: ATCTCCCAGGCTAGGCCGGCCCAAGGCAGTGAGCAAACAGGTTGCCCTCGCCCCCTGCGAAGATGAAGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp CTCATGAAAGAGCGGCCCAATCCCTGGTGCGAGCTGCCCCGCTTCTaGGGCAGGTGGGGGTTGTTAGCAGCCATCTCCTTGGTCTTTCGG +
Preference number: 6 (lower is better)
Translates to: LMKERPNPWCELPRF*GRWGLLAAISLVFR
Trigger: CCGAAAGACCAAGGAGATGGCTGCTAACAACCCCCACCTGCCCAAGAAGCGGGGCAGCTCGCACCAGGGATTGGGCCGCTCTTTCATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp AGTCCCATCCCCGGTGCTGACCAAGGGCTGGGAGCTAACTCTAGGTaGGTCAGGGCACTGGATGTGTGGATGGGAGGAAGAGCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: SPIPGADQGLGANSR*VRALDVWMGGRACQ
Trigger: CTGGCAGGCTCTTCCTCCCATCCACACATCCAGTGCCCTGACCAACCTAGAGTTAGCTCCCAGCCCTTGGTCAGCACCGGGGATGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp GGGCGGGAAGAGCCAGGTGGCTTGCTGATGTCTGGGCGGACACTCTaGCTCTCTGGGAGAAAGCTCTCCAACGGTCCGTGTACCGAGAGA +
Preference number: 6 (lower is better)
Translates to: GREEPGGLLMSGRTL*LSGRKLSNGPCTER
Trigger: TCTCTCGGTACACGGACCGTTGGAGAGCTTTCTCCCAGAGAGCAAGAGTGTCCGCCCAGACATCAGCAAGCCACCTGGCTCTTCCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp TCGACTCCCGGATGTCGTTGGCTTGTAGGAGCATGTTaGGAAAGTTGGCAGCCTGGGCCAGGGTGCCCGCTG +
Preference number: 6 (lower is better)
Translates to: STPGCRWLVGAC*ESWQPGPGCPL
Trigger: CAGCGGGCACCCTGGCCCAGGCTGCCAACTTTCTCAACATGCTCCTACAAGCCAACGACATCCGGGAGTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp CTGAGGGGACAGCCCGGGTGGCATAGCAGAGGAAGCTaGCCCAACAAAGCAGCAGCATTTCCGCCACAACCA +
Preference number: 6 (lower is better)
Translates to: LRGQPGWHSRGS*PNKAAAFPPQP
Trigger: TGGTTGTGGCGGAAATGCTGCTGCTTTGTTGGGGCAGCTTCCTCTGCTATGCCACCCGGGCTGTCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp GAGGCCTCGCAGTGGTTTGAGAGCTGTCCATGCTGCTaGTCTTGCCAGGAGAAGGTGGGGCTGACAGAGGAG +
Preference number: 6 (lower is better)
Translates to: EASQWFESCPCC*SCQEKVGLTEE
Trigger: CTCCTCTGTCAGCCCCACCTTCTCCTGGCAAGAGCAGCAGCATGGACAGCTCTCAAACCACTGCGAGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp GCTTTAATGGCCAGGCCCAGGCTGCGCACGGAACCCTaGTGCAGAGGGGTCTTGAGGCTGTGGGATTTTGAG +
Preference number: 6 (lower is better)
Translates to: ALMARPRLRTEP*CRGVLRLWDFE
Trigger: CTCAAAATCCCACAGCCTCAAGACCCCTCTGCAGCAGGGTTCCGTGCGCAGCCTGGGCCTGGCCATTAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp CTCCCCCACATCACTCATCTCCCACAGGCACAGTTCTaGCTTGGCAGCATGGGACGGAAGAGCCTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: LPHITHLPQAQF*LGSMGRKSLWV
Trigger: CACCCAGAGGCTCTTCCGTCCCATGCTGCCAAGGCAGAACTGTGCCTGTGGGAGATGAGTGATGTGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CCTTTGGGGGCATCCACATGGGCTCAGATCTTGGCTTaGCTTGGGACGGTAGTGGAGGCAGAGAGCGCAAGG +
Preference number: 6 (lower is better)
Translates to: PLGASTWAQILA*LGTVVEAESAR
Trigger: CCTTGCGCTCTCTGCCTCCACTACCGTCCCAAGCCAAGCCAAGATCTGAGCCCATGTGGATGCCCCCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CCCGGGCCGCTTGCACACTGGTTGATGTCCACACTTTaGAGGTCGATGTCCATCTGCACCTGTCCCCTGACC +
Preference number: 6 (lower is better)
Translates to: PGPLAHWLMSTL*RSMSICTCPLT
Trigger: GGTCAGGGGACAGGTGCAGATGGACATCGACCTCCAAAGTGTGGACATCAACCAGTGTGCAAGCGGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp AGTGGTCATGGTGACAGAGGTAGAAGTGGCGGCCAGTaGGAGTGTGACCCCGGGTCACCAGAGCTGTGTGCT +
Preference number: 6 (lower is better)
Translates to: SGHGDRGRSGGQ*ECDPGSPELCA
Trigger: AGCACACAGCTCTGGTGACCCGGGGTCACACTCCCACTGGCCGCCACTTCTACCTCTGTCACCATGACCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp AATCCCTGGTGCGAGCTGCCCCGCTTCTTGGGCAGGTaGGGGTTGTTAGCAGCCATCTCCTTGGTCTTTCGG +
Preference number: 6 (lower is better)
Translates to: NPWCELPRFLGR*GLLAAISLVFR
Trigger: CCGAAAGACCAAGGAGATGGCTGCTAACAACCCCCACCTGCCCAAGAAGCGGGGCAGCTCGCACCAGGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp GTGGTCATAAGTGCTGCGGGTCTTGCGGAGGGCCGGTaGCTTCTCCGTTTCTTGAAGGCTGGAGCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: VVISAAGLAEGR*LLRFLKAGAEE
Trigger: CTCCTCAGCTCCAGCCTTCAAGAAACGGAGAAGCCACCGGCCCTCCGCAAGACCCGCAGCACTTATGACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp TTTCTCACCGGCCTTGGAGGAAGCTTTGTCTGGCTGTaGGCTGGACCGCTCAGGGGCTTCATCCTCCCAAGG +
Preference number: 6 (lower is better)
Translates to: FLTGLGGSFVWL*AGPLRGFILPR
Trigger: CCTTGGGAGGATGAAGCCCCTGAGCGGTCCAGCCCACAGCCAGACAAAGCTTCCTCCAAGGCCGGTGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp GGCTACCCCCATGGCTTAGGAGTTTCTCACCGGCCTTaGAGGAAGCTTTGTCTGGCTGTGGGCTGGACCGCT +
Preference number: 6 (lower is better)
Translates to: GYPHGLGVSHRP*RKLCLAVGWTA
Trigger: AGCGGTCCAGCCCACAGCCAGACAAAGCTTCCTCCAAGGCCGGTGAGAAACTCCTAAGCCATGGGGGTAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp GCAGCTACCTGCCTGGATCCAGAATCTGTAGACGCGTaGCCTGCATCGTTCGGACGGGCCTCAGAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: AATCLDPESVDA*PASFGRASEAS
Trigger: TGAAGCCTCTGAGGCCCGTCCGAACGATGCAGGCCACGCGTCTACAGATTCTGGATCCAGGCAGGTAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp AACCTTGGTGTCACTGTCCGAGTCAGGAGCATCCCATaGGCACACCTCAGCAGTCCCATCCCCGGTGCTGAC +
Preference number: 6 (lower is better)
Translates to: NLGVTVRVRSIP*AHLSSPIPGAD
Trigger: GTCAGCACCGGGGATGGGACTGCTGAGGTGTGCCCATGGGATGCTCCTGACTCGGACAGTGACACCAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp TTCCGGGCGGGAAGAGCCAGGTGGCTTGCTGATGTCTaGGCGGACACTCTTGCTCTCTGGGAGAAAGCTCTC +
Preference number: 6 (lower is better)
Translates to: FRAGRARWLADV*ADTLALWEKAL
Trigger: GAGAGCTTTCTCCCAGAGAGCAAGAGTGTCCGCCCAGACATCAGCAAGCCACCTGGCTCTTCCCGCCCGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CTCGACTCCCGGATGTCGTTGGCTTGTAGGAGCATGTaGAGAAAGTTGGCAGCCTGGGCCAGGGTGCCCGCT +
Preference number: 6 (lower is better)
Translates to: LDSRMSLACRSM*RKLAAWARVPA
Trigger: AGCGGGCACCCTGGCCCAGGCTGCCAACTTTCTCAACATGCTCCTACAAGCCAACGACATCCGGGAGTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp GCCCGGGCCGCTTGCACACTGGTTGATGTCCACACTTaGGAGGTCGATGTCCATCTGCACCTGTCCCCTGAC +
Preference number: 6 (lower is better)
Translates to: ARAACTLVDVHT*EVDVHLHLSPD
Trigger: GTCAGGGGACAGGTGCAGATGGACATCGACCTCCAAAGTGTGGACATCAACCAGTGTGCAAGCGGCCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp TGGCTACCCCCATGGCTTAGGAGTTTCTCACCGGCCTaGGAGGAAGCTTTGTCTGGCTGTGGGCTGGACCGC +
Preference number: 6 (lower is better)
Translates to: WLPPWLRSFSPA*EEALSGCGLDR
Trigger: GCGGTCCAGCCCACAGCCAGACAAAGCTTCCTCCAAGGCCGGTGAGAAACTCCTAAGCCATGGGGGTAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp GGGACAGATCTCAGCAGCTCTGCCTGCCACGCTGCCTaGCCTCTGGAGAGAGGCTTGGGCTTTCTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: GTDLSSSACHAA*PLERGLGFLCV
Trigger: GACACAGAGAAAGCCCAAGCCTCTCTCCAGAGGCAAGGCAGCGTGGCAGGCAGAGCTGCTGAGATCTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp CTACCCCCATGGCTTAGGAGTTTCTCACCGGCCTTGGAGGAAGCTTaGTCTGGCTGTGGGCTGGACCGCTCAGGGGCTTCATCCTCCCAA +
Preference number: 6 (lower is better)
Translates to: LPPWLRSFSPALEEA*SGCGLDRSGASSSQ
Trigger: TTGGGAGGATGAAGCCCCTGAGCGGTCCAGCCCACAGCCAGACAAAGCTTCCTCCAAGGCCGGTGAGAAACTCCTAAGCCATGGGGGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp GGAGTCTCTTCCTGTACCTTGTTCCCAGAGAGGTCCTaGAGGACGGTCTCATCCCCCATCCGAGTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: GVSSCTLFPERS*RTVSSPIRVAC
Trigger: GCAGGCCACTCGGATGGGGGATGAGACCGTCCTTCAGGACCTCTCTGGGAACAAGGTACAGGAAGAGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp GGACCGCTCAGGGGCTTCATCCTCCCAAGGGCATACTaGCTCCTGTCCTTGAGGGACTGTGGGTTTTGCCCT +
Preference number: 6 (lower is better)
Translates to: GPLRGFILPRAY*LLSLRDCGFCP
Trigger: AGGGCAAAACCCACAGTCCCTCAAGGACAGGAGTCAGTATGCCCTTGGGAGGATGAAGCCCCTGAGCGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp CCAAGGACTGTCCTTCTACTCCCTGACCAACAGTGCTaGGGGGCAAGTCTGAGACCTTGGGGACCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: PRTVLLLPDQQC*GASLRPWGPGQ
Trigger: CTGCCCAGGTCCCCAAGGTCTCAGACTTGCCCCTCAGCACTGTTGGTCAGGGAGTAGAAGGACAGTCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp GCTCTCGGCTGCCCTCCTTTTGACAAACGTGGAGCATaGGGCTGGTGTGAGCGTTCTGTTGGTTCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: ALGCPPFDKRGA*GWCERSVGSGG
Trigger: CCCTCCAGAACCAACAGAACGCTCACACCAGCCGCATGCTCCACGTTTGTCAAAAGGAGGGCAGCCGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp TGGGACGGTAGTGGAGGCAGAGAGCGCAAGGGCCTTTaGCTCCCTAGAGCCCCACTACAGAGGAAACAGCAA +
Preference number: 6 (lower is better)
Translates to: WDGSGGRERKGL*LPRAPLQRKQQ
Trigger: TTGCTGTTTCCTCTGTAGTGGGGCTCTAGGGAGCCAAAGGCCCTTGCGCTCTCTGCCTCCACTACCGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp GCAGCCTTCTCCCAGCCTCTTCATGAGGCCTCGCAGTaGTTTGAGAGCTGTCCATGCTGCTGCTCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: AAFSQPLHEASQ*FESCPCCCSCQ
Trigger: CTGGCAAGAGCAGCAGCATGGACAGCTCTCAAACCACTGCGAGGCCTCATGAAGAGGCTGGGAGAAGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CCGGTGCTGACCAAGGGCTGGGAGCTAACTCTAGGTTaGTCAGGGCACTGGATGTGTGGATGGGAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: PVLTKGWELTLG*SGHWMCGWEEE
Trigger: CTCTTCCTCCCATCCACACATCCAGTGCCCTGACCAACCTAGAGTTAGCTCCCAGCCCTTGGTCAGCACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CAGAGTAGAGAAAGGCCAGGGCTGCTTCAGCCCCCTTaGGGGGCATCCACATGGGCTCAGATCTTGGCTTGG +
Preference number: 6 (lower is better)
Translates to: QSRERPGLLQPP*GASTWAQILAW
Trigger: CCAAGCCAAGATCTGAGCCCATGTGGATGCCCCCAAAGGGGGCTGAAGCAGCCCTGGCCTTTCTCTACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp GAGCCAGGTGGCTTGCTGATGTCTGGGCGGACACTCTaGCTCTCTGGGAGAAAGCTCTCCAACGGTCCGTGT +
Preference number: 6 (lower is better)
Translates to: EPGGLLMSGRTL*LSGRKLSNGPC
Trigger: ACACGGACCGTTGGAGAGCTTTCTCCCAGAGAGCAAGAGTGTCCGCCCAGACATCAGCAAGCCACCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp GAACATCTCCAGAGTAGAGAAAGGCCAGGGCTGCTTCAGCCCCCTTaGGGGGCATCCACATGGGCTCAGATCTTGGCTTGGCTTGGGACG +
Preference number: 6 (lower is better)
Translates to: EHLQSRERPGLLQPP*GASTWAQILAWLGT
Trigger: CGTCCCAAGCCAAGCCAAGATCTGAGCCCATGTGGATGCCCCCAAAGGGGGCTGAAGCAGCCCTGGCCTTTCTCTACTCTGGAGATGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp CACTTCCCAGGGACAGATCTCAGCAGCTCTGCCTGCCACGCTGCCTaGCCTCTGGAGAGAGGCTTGGGCTTTCTCTGTGTCTCTTTGTGG +
Preference number: 6 (lower is better)
Translates to: HFPGTDLSSSACHAA*PLERGLGFLCVSLW
Trigger: CCACAAAGAGACACAGAGAAAGCCCAAGCCTCTCTCCAGAGGCAAGGCAGCGTGGCAGGCAGAGCTGCTGAGATCTGTCCCTGGGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp CACAGGTGTGTGTTTGAGTACCAGCCCGGGCCGCTTGCACACTGGTaGATGTCCACACTTTGGAGGTCGATGTCCATCTGCACCTGTCCC +
Preference number: 6 (lower is better)
Translates to: HRCVFEYQPGPLAHW*MSTLWRSMSICTCP
Trigger: GGGACAGGTGCAGATGGACATCGACCTCCAAAGTGTGGACATCAACCAGTGTGCAAGCGGCCCGGGCTGGTACTCAAACACACACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp CCTCCCAAGGGCATACTGACTCCTGTCCTTGAGGGACTGTGGGTTTaGCCCTCACGGTTTGCTCCCCCGACTCTGCTAAGCATCCCTTTC +
Preference number: 6 (lower is better)
Translates to: PPKGILTPVLEGLWV*PSRFAPPTLLSIPF
Trigger: GAAAGGGATGCTTAGCAGAGTCGGGGGAGCAAACCGTGAGGGCAAAACCCACAGTCCCTCAAGGACAGGAGTCAGTATGCCCTTGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp ACTGTGACTAGCCAGCCAGGACGGAGCTGGCCCTCATaGCATTCCAGGAAAGGGGGAGATAGCTTCACCTGC +
Preference number: 6 (lower is better)
Translates to: TVTSQPGRSWPS*HSRKGGDSFTC
Trigger: GCAGGTGAAGCTATCTCCCCCTTTCCTGGAATGTCATGAGGGCCAGCTCCGTCCTGGCTGGCTAGTCACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp CCAGGCTGCGCACGGAACCCTGCTGCAGAGGGGTCTTaGGGCTGTGGGATTTTGAGAAGACCTTGGGCTTTT +
Preference number: 6 (lower is better)
Translates to: PGCARNPAAEGS*GCGILRRPWAF
Trigger: AAAAGCCCAAGGTCTTCTCAAAATCCCACAGCCTCAAGACCCCTCTGCAGCAGGGTTCCGTGCGCAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp TTCTACTCCCTGACCAACAGTGCTGAGGGGCAAGTCTaGGACCTTGGGGACCTGGGCAGGTGGTTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: FYSLTNSAEGQV*DLGDLGRWFPR
Trigger: CCTTGGAAACCACCTGCCCAGGTCCCCAAGGTCTCAGACTTGCCCCTCAGCACTGTTGGTCAGGGAGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp CCTGCCAGTACCATGCCTTCCTGCAGGCTTATAGGCTaGAGTTCCGAGCTTGCTCCTCCCCCATCGACAGGA +
Preference number: 6 (lower is better)
Translates to: PASTMPSCRLIG*SSELAPPPSTG
Trigger: TCCTGTCGATGGGGGAGGAGCAAGCTCGGAACTTCAGCCTATAAGCCTGCAGGAAGGCATGGTACTGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp CCTTGGGGAGGTCTGTGTCCACCACGTCTTCCTGGGTaGAGAGCCCTGATGACATTGTGCCTTCTAAGGGGC +
Preference number: 6 (lower is better)
Translates to: PWGGLCPPRLPG*RALMTLCLLRG
Trigger: GCCCCTTAGAAGGCACAATGTCATCAGGGCTCTTCACCCAGGAAGACGTGGTGGACACAGACCTCCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp TGGTTGATGTCCACACTTTGGAGGTCGATGTCCATCTaGACCTGTCCCCTGACCTCTGGGGTGAGGTCTGGC +
Preference number: 6 (lower is better)
Translates to: WLMSTLWRSMSI*TCPLTSGVRSG
Trigger: GCCAGACCTCACCCCAGAGGTCAGGGGACAGGTGCAGATGGACATCGACCTCCAAAGTGTGGACATCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp TTTCCAGCAGGACGATTCCAGATGCCCGGATCCTCTTaGTCCCTCGGCAACGGTAGGCCACCAGCATACTCA +
Preference number: 6 (lower is better)
Translates to: FPAGRFQMPGSS*SLGNGRPPAYS
Trigger: TGAGTATGCTGGTGGCCTACCGTTGCCGAGGGAGCAAGAGGATCCGGGCATCTGGAATCGTCCTGCTGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp CATGGGACGGAAGAGCCTCTGGGTGTGCGTCTCCTTTaGTCACTACCACAAACCTGCCCCCAGTTCTGTCAG +
Preference number: 6 (lower is better)
Translates to: HGTEEPLGVRLL*SLPQTCPQFCQ
Trigger: CTGACAGAACTGGGGGCAGGTTTGTGGTAGTGAGCAAAGGAGACGCACACCCAGAGGCTCTTCCGTCCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp TCTCCGCCTCCCATGGGCATACCTCCGCAATACCACTaGCCAAACTACCTGAGCTTCCTGGGGCTTGAAGTG +
Preference number: 6 (lower is better)
Translates to: SPPPMGIPPQYH*PNYLSFLGLEV
Trigger: CACTTCAAGCCCCAGGAAGCTCAGGTAGTTTGGGCAGTGGTATTGCGGAGGTATGCCCATGGGAGGCGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp CCCACACACACAGTTCTGCTAGCCCTTTCCCTGGGCTaGTTGCTCCATGAAGACCAACCTTGGGGAGGTCTG +
Preference number: 6 (lower is better)
Translates to: PTHTVLLALSLG*LLHEDQPWGGL
Trigger: CAGACCTCCCCAAGGTTGGTCTTCATGGAGCAAGCAGCCCAGGGAAAGGGCTAGCAGAACTGTGTGTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp GGCTTGACTGCTTCCCAAGGACACACTTGCAGTACCTaGCTACCCCCATGGCTTAGGAGTTTCTCACCGGCC +
Preference number: 6 (lower is better)
Translates to: GLTASQGHTCST*LPPWLRSFSPA
Trigger: GGCCGGTGAGAAACTCCTAAGCCATGGGGGTAGCCAGGTACTGCAAGTGTGTCCTTGGGAAGCAGTCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp TGGCTTGCTGATGTCTGGGCGGACACTCTTGCTCTCTaGGAGAAAGCTCTCCAACGGTCCGTGTACCGAGAG +
Preference number: 6 (lower is better)
Translates to: WLADVWADTLAL*EKALQRSVYRE
Trigger: CTCTCGGTACACGGACCGTTGGAGAGCTTTCTCCCAGAGAGCAAGAGTGTCCGCCCAGACATCAGCAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp TCCACGTCCTCCTCCACGCTCGACTCCCGGATGTCGTaGGCTTGTAGGAGCATGTTGAGAAAGTTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: STSSSTLDSRMS*ACRSMLRKLAA
Trigger: GGCTGCCAACTTTCTCAACATGCTCCTACAAGCCAACGACATCCGGGAGTCGAGCGTGGAGGAGGACGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CCCTGGACCCGGGGCCACTCTCTTGTTCCTATCTTCTaGCTCTCGGCTGCCCTCCTTTTGACAAACGTGGAG +
Preference number: 6 (lower is better)
Translates to: PWTRGHSLVPIF*LSAALLLTNVE
Trigger: CTCCACGTTTGTCAAAAGGAGGGCAGCCGAGAGCAAGAAGATAGGAACAAGAGAGTGGCCCCGGGTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp GCTTCATCCTCCCAAGGGCATACTGACTCCTGTCCTTaGGGGACTGTGGGTTTTGCCCTCACGGTTTGCTCC +
Preference number: 6 (lower is better)
Translates to: ASSSQGHTDSCP*GTVGFALTVCS
Trigger: GGAGCAAACCGTGAGGGCAAAACCCACAGTCCCTCAAGGACAGGAGTCAGTATGCCCTTGGGAGGATGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp GGGCCACTCTCTTGTTCCTATCTTCTTGCTCTCGGCTaGCCTCCTTTTGACAAACGTGGAGCATGCGGCTGG +
Preference number: 6 (lower is better)
Translates to: GPLSCSYLLALG*PPFDKRGACGW
Trigger: CCAGCCGCATGCTCCACGTTTGTCAAAAGGAGGGCAGCCGAGAGCAAGAAGATAGGAACAAGAGAGTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp CAGGTCTCCGCCCAGATTCCGTTCTCCCCAGAAGGTTaGCTTCTTGGGGGATTTCTGCCTTTCTTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: QVSAQIPFSPEG*LLGGFLPFFRE
Trigger: CTCCCTGAAGAAAGGCAGAAATCCCCCAAGAAGGCAACCTTCTGGGGAGAACGGAATCTGGGCGGAGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp GGCTGCCCTCCTTTTGACAAACGTGGAGCATGCGGCTaGTGTGAGCGTTCTGTTGGTTCTGGAGGGACTCTT +
Preference number: 6 (lower is better)
Translates to: GCPPFDKRGACG*CERSVGSGGTL
Trigger: AAGAGTCCCTCCAGAACCAACAGAACGCTCACACCAGCCGCATGCTCCACGTTTGTCAAAAGGAGGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CGGTTTGCTCCCCCGACTCTGCTAAGCATCCCTTTCTaGAGGGAGTCTCCTTTCCTGGGAGAGACTTCCCAT +
Preference number: 6 (lower is better)
Translates to: RFAPPTLLSIPF*RESPFLGETSH
Trigger: ATGGGAAGTCTCTCCCAGGAAAGGAGACTCCCTCCAGAAAGGGATGCTTAGCAGAGTCGGGGGAGCAAACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp TCCCAAGGACACACTTGCAGTACCTGGCTACCCCCATaGCTTAGGAGTTTCTCACCGGCCTTGGAGGAAGCT +
Preference number: 6 (lower is better)
Translates to: SQGHTCSTWLPP*LRSFSPALEEA
Trigger: AGCTTCCTCCAAGGCCGGTGAGAAACTCCTAAGCCATGGGGGTAGCCAGGTACTGCAAGTGTGTCCTTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CAGACTGATTTCTCAGGGGCAGCTGGCACACCTGCCTaGGTTACTGGTAAAGCCAGGGGGCCAGATTCATCA +
Preference number: 6 (lower is better)
Translates to: QTDFSGAAGTPA*VTGKARGPDSS
Trigger: TGATGAATCTGGCCCCCTGGCTTTACCAGTAACCCAGGCAGGTGTGCCAGCTGCCCCTGAGAAATCAGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CGTGGCCACTTGGGACTGTCAAGGCTCCTTAGGTCATaGGTCAGTACTCGCTTCTGGAGGACAGGACGATCC +
Preference number: 6 (lower is better)
Translates to: RGHLGLSRLLRS*VSTRFWRTGRS
Trigger: GGATCGTCCTGTCCTCCAGAAGCGAGTACTGACCAATGACCTAAGGAGCCTTGACAGTCCCAAGTGGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp GTGTTTGAGTACCAGCCCGGGCCGCTTGCACACTGGTaGATGTCCACACTTTGGAGGTCGATGTCCATCTGC +
Preference number: 6 (lower is better)
Translates to: VFEYQPGPLAHW*MSTLWRSMSIC
Trigger: GCAGATGGACATCGACCTCCAAAGTGTGGACATCAACCAGTGTGCAAGCGGCCCGGGCTGGTACTCAAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CCAGGTCTCCGCCCAGATTCCGTTCTCCCCAGAAGGTaGCCTTCTTGGGGGATTTCTGCCTTTCTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: PGLRPDSVLPRR*PSWGISAFLQG
Trigger: TCCCTGAAGAAAGGCAGAAATCCCCCAAGAAGGCAACCTTCTGGGGAGAACGGAATCTGGGCGGAGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp TGTTTGAGTACCAGCCCGGGCCGCTTGCACACTGGTTaGTGTCCACACTTTGGAGGTCGATGTCCATCTGCA +
Preference number: 6 (lower is better)
Translates to: CLSTSPGRLHTG*CPHFGGRCPSA
Trigger: TGCAGATGGACATCGACCTCCAAAGTGTGGACATCAACCAGTGTGCAAGCGGCCCGGGCTGGTACTCAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp TTTGGCCTTGTTGACACTCTCTGGCGGGTCCATTCCTaGTTCGGGTTCAGTTACTTCCCAGGGGCACACCTC +
Preference number: 6 (lower is better)
Translates to: FGLVDTLWRVHS*FGFSYFPGAHL
Trigger: GAGGTGTGCCCCTGGGAAGTAACTGAACCCGAATCAGGAATGGACCCGCCAGAGAGTGTCAACAAGGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp GCCTTCCTGCAGGCTTATAGGCTGAAGTTCCGAGCTTaGTCCTCCCCCATCGACAGGAACCACTTGGGTTAT +
Preference number: 6 (lower is better)
Translates to: AFLQAYRLKFRA*SSPIDRNHLGY
Trigger: ATAACCCAAGTGGTTCCTGTCGATGGGGGAGGAGCAAGCTCGGAACTTCAGCCTATAAGCCTGCAGGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp TCGCTTCTGGAGGACAGGACGATCCAGATCCTCTCCTaGAGTCTCTTCCTGTACCTTGTTCCCAGAGAGGTC +
Preference number: 6 (lower is better)
Translates to: SLLEDRTIQILS*SLFLYLVPREV
Trigger: GACCTCTCTGGGAACAAGGTACAGGAAGAGACTCCAGGAGAGGATCTGGATCGTCCTGTCCTCCAGAAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp GTGGCCACTTGGGACTGTCAAGGCTCCTTAGGTCATTaGTCAGTACTCGCTTCTGGAGGACAGGACGATCCA +
Preference number: 6 (lower is better)
Translates to: VATWDCQGSLGH*SVLASGGQDDP
Trigger: TGGATCGTCCTGTCCTCCAGAAGCGAGTACTGACCAATGACCTAAGGAGCCTTGACAGTCCCAAGTGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp TGTGTGTTTGAGTACCAGCCCGGGCCGCTTGCACACTaGTTGATGTCCACACTTTGGAGGTCGATGTCCATC +
Preference number: 6 (lower is better)
Translates to: CVFEYQPGPLAH*LMSTLWRSMSI
Trigger: GATGGACATCGACCTCCAAAGTGTGGACATCAACCAGTGTGCAAGCGGCCCGGGCTGGTACTCAAACACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CTTCCTCGGCTTCCCAGGGACACACCTCTATGGGCCTaGAGCTCCCGTGTTCCTGGAGTTCATCTTTTAGTT +
Preference number: 6 (lower is better)
Translates to: LPRLPRDTPLWA*SSRVPGVHLLV
Trigger: AACTAAAAGATGAACTCCAGGAACACGGGAGCTCCAGGCCCATAGAGGTGTGTCCCTGGGAAGCCGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CCAACCTTGGGGAGGTCTGTGTCCACCACGTCTTCCTaGGTGAAGAGCCCTGATGACATTGTGCCTTCTAAG +
Preference number: 6 (lower is better)
Translates to: PTLGRSVSTTSS*VKSPDDIVPSK
Trigger: CTTAGAAGGCACAATGTCATCAGGGCTCTTCACCCAGGAAGACGTGGTGGACACAGACCTCCCCAAGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CCGCCCAGATTCCGTTCTCCCCAGAAGGTTGCCTTCTaGGGGGATTTCTGCCTTTCTTCAGGGAGTTCCTGT +
Preference number: 6 (lower is better)
Translates to: PPRFRSPQKVAF*GDFCLSSGSSC
Trigger: ACAGGAACTCCCTGAAGAAAGGCAGAAATCCCCCAAGAAGGCAACCTTCTGGGGAGAACGGAATCTGGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp ACCGCCTTTGCTTCCATCAGAAGCATCTGTAGCTGCTaGCACCCCAAAGTCCTGACTCTCCCTGGGACACAC +
Preference number: 6 (lower is better)
Translates to: TAFASIRSICSC*HPKVLTLPGTH
Trigger: GTGTGTCCCAGGGAGAGTCAGGACTTTGGGGTGCAAGCAGCTACAGATGCTTCTGATGGAAGCAAAGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CCTGGACTTGCCTCCCAGGGGCAGATCTCAGCTTCCTaGATAGAAGGGACCTCTTCTACTTCCCAAGGACAC +
Preference number: 6 (lower is better)
Translates to: PGLASQGQISAS*IEGTSSTSQGH
Trigger: GTGTCCTTGGGAAGTAGAAGAGGTCCCTTCTATCAAGGAAGCTGAGATCTGCCCCTGGGAGGCAAGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp ACACACACAGTTCTGCTAGCCCTTTCCCTGGGCTGCTaGCTCCATGAAGACCAACCTTGGGGAGGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: THTVLLALSLGC*LHEDQPWGGLC
Trigger: ACACAGACCTCCCCAAGGTTGGTCTTCATGGAGCAAGCAGCCCAGGGAAAGGGCTAGCAGAACTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp GGCCACTCTCTTGTTCCTATCTTCTTGCTCTCGGCTGCCCTCCTTTaGACAAACGTGGAGCATGCGGCTGGTGTGAGCGTTCTGTTGGTT +
Preference number: 6 (lower is better)
Translates to: GHSLVPIFLLSAALL*TNVEHAAGVSVLLV
Trigger: AACCAACAGAACGCTCACACCAGCCGCATGCTCCACGTTTGTCAAAAGGAGGGCAGCCGAGAGCAAGAAGATAGGAACAAGAGAGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp AGAGAGACACCAGGTCTCCGCCCAGATTCCGTTCTCCCCAGAAGGTaGCCTTCTTGGGGGATTTCTGCCTTTCTTCAGGGAGTTCCTGTA +
Preference number: 6 (lower is better)
Translates to: RETPGLRPDSVLPRR*PSWGISAFLQGVPV
Trigger: TACAGGAACTCCCTGAAGAAAGGCAGAAATCCCCCAAGAAGGCAACCTTCTGGGGAGAACGGAATCTGGGCGGAGACCTGGTGTCTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp CCCACAGCTCCTGGACTTGCCTCCCAGGGGCAGATCTCAGCTTCCTaGATAGAAGGGACCTCTTCTACTTCCCAAGGACACACTTTCTCA +
Preference number: 6 (lower is better)
Translates to: PTAPGLASQGQISAS*IEGTSSTSQGHTFS
Trigger: TGAGAAAGTGTGTCCTTGGGAAGTAGAAGAGGTCCCTTCTATCAAGGAAGCTGAGATCTGCCCCTGGGAGGCAAGTCCAGGAGCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp TGGAGCCTCCGTTTCTGTGGGGCTTGGCTTTGGAACTaGCTTGGCTCCAGTCTCAAGCTCCAAAGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: WSLRFCGAWLWN*LGSSLKLQRFL
Trigger: CAAGAACCTTTGGAGCTTGAGACTGGAGCCAAGTCAGTTCCAAAGCCAAGCCCCACAGAAACGGAGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp AGAACCGCCTTTGCTTCCATCAGAAGCATCTGTAGCTaGTTGCACCCCAAAGTCCTGACTCTCCCTGGGACA +
Preference number: 6 (lower is better)
Translates to: RTAFASIRSICS*LHPKVLTLPGT
Trigger: TGTCCCAGGGAGAGTCAGGACTTTGGGGTGCAAGCAGCTACAGATGCTTCTGATGGAAGCAAAGGCGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp TCAAGGCTCCTTAGGTCATTGGTCAGTACTCGCTTCTaGAGGACAGGACGATCCAGATCCTCTCCTGGAGTC +
Preference number: 6 (lower is better)
Translates to: SRLLRSLVSTRF*RTGRSRSSPGV
Trigger: GACTCCAGGAGAGGATCTGGATCGTCCTGTCCTCCAGAAGCGAGTACTGACCAATGACCTAAGGAGCCTTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CGCCCAGATTCCGTTCTCCCCAGAAGGTTGCCTTCTTaGGGGATTTCTGCCTTTCTTCAGGGAGTTCCTGTA +
Preference number: 6 (lower is better)
Translates to: RPDSVLPRRLPS*GISAFLQGVPV
Trigger: TACAGGAACTCCCTGAAGAAAGGCAGAAATCCCCCAAGAAGGCAACCTTCTGGGGAGAACGGAATCTGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CTTGTTCCTATCTTCTTGCTCTCGGCTGCCCTCCTTTaGACAAACGTGGAGCATGCGGCTGGTGTGAGCGTT +
Preference number: 6 (lower is better)
Translates to: LVPIFLLSAALL*TNVEHAAGVSV
Trigger: AACGCTCACACCAGCCGCATGCTCCACGTTTGTCAAAAGGAGGGCAGCCGAGAGCAAGAAGATAGGAACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CCACCTCCTTCTCCGAACCAAGCCTCTCTGACTTTTTaGGAGCACTGGCAGCTACCTGCCTGGATCCAGAAT +
Preference number: 6 (lower is better)
Translates to: PPPSPNQASLTF*EHWQLPAWIQN
Trigger: ATTCTGGATCCAGGCAGGTAGCTGCCAGTGCTCCAAAAAAGTCAGAGAGGCTTGGTTCGGAGAAGGAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp AAGACTCTGGAGCCTCCGTTTCTGTGGGGCTTGGCTTaGGAACTGACTTGGCTCCAGTCTCAAGCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: KTLEPPFLWGLA*ELTWLQSQAPK
Trigger: CTTTGGAGCTTGAGACTGGAGCCAAGTCAGTTCCAAAGCCAAGCCCCACAGAAACGGAGGCTCCAGAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp CGGCTTTGCCTTCCGCCCCACGGACTTCATATTTCTCACTGCAGTTaGCTCCTGACAGCCGTTGAACATCTCCAGAGTAGAGAAAGGCCA +
Preference number: 6 (lower is better)
Translates to: RLCLPPHGLHISHCS*LLTAVEHLQSRERP
Trigger: TGGCCTTTCTCTACTCTGGAGATGTTCAACGGCTGTCAGGAGCAAACTGCAGTGAGAAATATGAAGTCCGTGGGGCGGAAGGCAAAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp TGCCCCAACAAAGCAGCAGCATTTCCGCCACAACCATaGTGTAGTCCCAGTGGTCATGGTGACAGAGGTAGA +
Preference number: 6 (lower is better)
Translates to: CPNKAAAFPPQP*CSPSGHGDRGR
Trigger: TCTACCTCTGTCACCATGACCACTGGGACTACATCATGGTTGTGGCGGAAATGCTGCTGCTTTGTTGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS TCA 72 bp GATTTCTGCCTTTCTTCAGGGAGTTCCTGTACCCTCTaGGTAGATGTCCCCTCCCCCACATCACTCATCTCC +
Preference number: 6 (lower is better)
Translates to: DFCLSSGSSCTL*VDVPSPTSLIS
Trigger: GGAGATGAGTGATGTGGGGGAGGGGACATCTACTCAGAGGGTACAGGAACTCCCTGAAGAAAGGCAGAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp TTTTCCTCTGGCTTGACTGCTTCCCAAGGACACACTTaGAGTACCTGGCTACCCCCATGGCTTAGGAGTTTC +
Preference number: 6 (lower is better)
Translates to: FSSGLTASQGHT*STWLPPWLRSF
Trigger: GAAACTCCTAAGCCATGGGGGTAGCCAGGTACTGCAAGTGTGTCCTTGGGAAGCAGTCAAGCCAGAGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CACTTCATCCAAGATTTCTTCCCGGGGAGGTGCCCCTaGCTTCCAGAACTTAGGGATGAAGATCAGAGCAAG +
Preference number: 6 (lower is better)
Translates to: HFIQDFFPGRCP*LPELRDEDQSK
Trigger: CTTGCTCTGATCTTCATCCCTAAGTTCTGGAAGCCAGGGGCACCTCCCCGGGAAGAAATCTTGGATGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp GGACACACCTCTATGGGCCTGGAGCTCCCGTGTTCCTaGAGTTCATCTTTTAGTTTCTCAGTGTTCGGAGTG +
Preference number: 6 (lower is better)
Translates to: GHTSMGLELPCS*SSSFSFSVFGV
Trigger: CACTCCGAACACTGAGAAACTAAAAGATGAACTCCAGGAACACGGGAGCTCCAGGCCCATAGAGGTGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp CCTCCGTTTCTGTGGGGCTTGGCTTTGGAACTGACTTaGCTCCAGTCTCAAGCTCCAAAGGTTCTTGTTCTC +
Preference number: 6 (lower is better)
Translates to: PPFLWGLALELT*LQSQAPKVLVL
Trigger: GAGAACAAGAACCTTTGGAGCTTGAGACTGGAGCCAAGTCAGTTCCAAAGCCAAGCCCCACAGAAACGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CCCACCGTCCCTTCATTCAATTCCCAGGGACAGATCTaGGCTTTTTCACCAGTAGGAACTTCCTCGGCTTCC +
Preference number: 6 (lower is better)
Translates to: PTVPSFNSQGQI*AFSPVGTSSAS
Trigger: GGAAGCCGAGGAAGTTCCTACTGGTGAAAAAGCCAAGATCTGTCCCTGGGAATTGAATGAAGGGACGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CTTGTCTCAGCTCTCCCTTCTCTGATGCCCTGTCACTaGCTTCCAAGGACTGTCCTTCTACTCCCTGACCAA +
Preference number: 6 (lower is better)
Translates to: LVSALPSLMPCH*LPRTVLLLPDQ
Trigger: TTGGTCAGGGAGTAGAAGGACAGTCCTTGGAAGCAAGTGACAGGGCATCAGAGAAGGGAGAGCTGAGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp GCCTCCGTTTCTGTGGGGCTTGGCTTTGGAACTGACTaGGCTCCAGTCTCAAGCTCCAAAGGTTCTTGTTCT +
Preference number: 6 (lower is better)
Translates to: ASVSVGLGFGTD*APVSSSKGSCS
Trigger: AGAACAAGAACCTTTGGAGCTTGAGACTGGAGCCAAGTCAGTTCCAAAGCCAAGCCCCACAGAAACGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp CTAGGACTTTCTCTCTCTCTTCCCAGGACCTACTTAGGACTTGTCTaGATGGCTTCTTCTCAAGGCTTCCTCCCTCAGTCCTCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: LGLSLSLPRTYLGLV*MASSQGFLPQSSPR
Trigger: CCTGGGAGAGGACTGAGGGAGGAAGCCTTGAGAAGAAGCCATCAAGACAAGTCCTAAGTAGGTCCTGGGAAGAGAGAGAGAAAGTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp GGGACCTCTTCTACTTCCCAAGGACACACTTTCTCAGAACCGCCTTaGCTTCCATCAGAAGCATCTGTAGCTGCTTGCACCCCAAAGTCC +
Preference number: 6 (lower is better)
Translates to: GTSSTSQGHTFSEPP*LPSEASVAACTPKS
Trigger: GGACTTTGGGGTGCAAGCAGCTACAGATGCTTCTGATGGAAGCAAAGGCGGTTCTGAGAAAGTGTGTCCTTGGGAAGTAGAAGAGGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp TGGGCTCTAGTCTCCTCCCAGGGACAGATGTCTGCCATGGTACCCTaGATTTTATTTCCTTCCGGGTCTGTGACTTCCCACACACACAGT +
Preference number: 6 (lower is better)
Translates to: WALVSSQGQMSAMVP*ILFPSGSVTSHTHS
Trigger: ACTGTGTGTGTGGGAAGTCACAGACCCGGAAGGAAATAAAATCAAGGGTACCATGGCAGACATCTGTCCCTGGGAGGAGACTAGAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp GGACAGATTTCTGCTGTTGAAAGTGTTGCTTGCTTTTCCTCTGGCTaGACTGCTTCCCAAGGACACACTTGCAGTACCTGGCTACCCCCA +
Preference number: 6 (lower is better)
Translates to: GQISAVESVACFSSG*TASQGHTCSTWLPP
Trigger: TGGGGGTAGCCAGGTACTGCAAGTGTGTCCTTGGGAAGCAGTCAAGCCAGAGGAAAAGCAAGCAACACTTTCAACAGCAGAAATCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS GCA 72 bp CTCATACACTTCATCCAAGATTTCTTCCCGGGGAGGTaGCCCTGGCTTCCAGAACTTAGGGATGAAGATCAG +
Preference number: 6 (lower is better)
Translates to: LIHFIQDFFPGR*PWLPELRDEDQ
Trigger: CTGATCTTCATCCCTAAGTTCTGGAAGCCAGGGGCACCTCCCCGGGAAGAAATCTTGGATGAAGTGTATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp AGCTTTCTTGTCATTAGCTATGTTCTCCGCCTCCCATaGGCATACCTCCGCAATACCACTGCCCAAACTACC +
Preference number: 6 (lower is better)
Translates to: SFLVISYVLRLP*AYLRNTTAQTT
Trigger: GGTAGTTTGGGCAGTGGTATTGCGGAGGTATGCCCATGGGAGGCGGAGAACATAGCTAATGACAAGAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp TCCCCCATCGACAGGAACCACTTGGGTTATGTATTCTaGGAGAGAACCCATCTTCAGGTCTTGTCTCAGCTC +
Preference number: 6 (lower is better)
Translates to: SPIDRNHLGYVF*ERTHLQVLSQL
Trigger: GAGCTGAGACAAGACCTGAAGATGGGTTCTCTCCCAGAATACATAACCCAAGTGGTTCCTGTCGATGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CTTCCGCCCCACGGACTTCATATTTCTCACTGCAGTTaGCTCCTGACAGCCGTTGAACATCTCCAGAGTAGA +
Preference number: 6 (lower is better)
Translates to: LPPHGLHISHCS*LLTAVEHLQSR
Trigger: TCTACTCTGGAGATGTTCAACGGCTGTCAGGAGCAAACTGCAGTGAGAAATATGAAGTCCGTGGGGCGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp TCTCTCTCTCTTCCCAGGACCTACTTAGGACTTGTCTaGATGGCTTCTTCTCAAGGCTTCCTCCCTCAGTCC +
Preference number: 6 (lower is better)
Translates to: SLSLPRTYLGLV*MASSQGFLPQS
Trigger: GGACTGAGGGAGGAAGCCTTGAGAAGAAGCCATCAAGACAAGTCCTAAGTAGGTCCTGGGAAGAGAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp TCTGCTGTTGAAAGTGTTGCTTGCTTTTCCTCTGGCTaGACTGCTTCCCAAGGACACACTTGCAGTACCTGG +
Preference number: 6 (lower is better)
Translates to: SAVESVACFSSG*TASQGHTCSTW
Trigger: CCAGGTACTGCAAGTGTGTCCTTGGGAAGCAGTCAAGCCAGAGGAAAAGCAAGCAACACTTTCAACAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp TCTACTTCCCAAGGACACACTTTCTCAGAACCGCCTTaGCTTCCATCAGAAGCATCTGTAGCTGCTTGCACC +
Preference number: 6 (lower is better)
Translates to: STSQGHTFSEPP*LPSEASVAACT
Trigger: GGTGCAAGCAGCTACAGATGCTTCTGATGGAAGCAAAGGCGGTTCTGAGAAAGTGTGTCCTTGGGAAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CCA 72 bp TGTGAACTTCTCCTTTTGATGGGTGTTCTGATGTCCTaGTCTCTGGTTGTCCATCTACTTCCCAGGGACAGA +
Preference number: 6 (lower is better)
Translates to: CELLLLMGVLMS*SLVVHLLPRDR
Trigger: TCTGTCCCTGGGAAGTAGATGGACAACCAGAGACCAGGACATCAGAACACCCATCAAAAGGAGAAGTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 90 bp TTGCTCTCCCCGGCATTTTCTCCTCATCTTTGTGAACTTCTCCTTTaGATGGGTGTTCTGATGTCCTGGTCTCTGGTTGTCCATCTACTT +
Preference number: 6 (lower is better)
Translates to: LLSPAFSPHLCELLL*MGVLMSWSLVVHLL
Trigger: AAGTAGATGGACAACCAGAGACCAGGACATCAGAACACCCATCAAAAGGAGAAGTTCACAAAGATGAGGAGAAAATGCCGGGGAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5
CDS CAA 72 bp CCGGCATTTTCTCCTCATCTTTGTGAACTTCTCCTTTaGATGGGTGTTCTGATGTCCTGGTCTCTGGTTGTC +
Preference number: 6 (lower is better)
Translates to: PAFSPHLCELLL*MGVLMSWSLVV
Trigger: GACAACCAGAGACCAGGACATCAGAACACCCATCAAAAGGAGAAGTTCACAAAGATGAGGAGAAAATGCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093942.5