Pregenerated sensors for GPR176 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040133Ensembl transcript IDs: ENSMUST00000039160.3
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGAAGGAAGGGTTGGCAGTGGTTTCCTGGCAGCAGTGGTGACTGGTaGCAGAAGGGACATTTGTGGGAGGCCTTGGTGATACCAACAGGA | + |
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Preference number: 1 (lower is better) Translates to: RRKGWQWFPGSSGDW*QKGHLWEALVIPTG Trigger: TCCTGTTGGTATCACCAAGGCCTCCCACAAATGTCCCTTCTGTCACCAGTCACCACTGCTGCCAGGAAACCACTGCCAACCCTTCCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR TCA 90 bp | CAGTCCCAGAGTGGCTCACACGTGAGAACCAGGACATTGGGCTGCTaGAAGAACACGTTCTCCCATCCACCATGGCTCAGACTGAACCTT | + |
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Preference number: 1 (lower is better) Translates to: QSQSGSHVRTRTLGC*KNTFSHPPWLRLNL Trigger: AAGGTTCAGTCTGAGCCATGGTGGATGGGAGAACGTGTTCTTTCAGCAGCCCAATGTCCTGGTTCTCACGTGTGAGCCACTCTGGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR TCA 90 bp | CCCCACACATGGACTGAACTTCTGCCTAGGGGAGATGGGCCAGCATaGCTAAACAGGCTGCTAGGACCACTGCCTTTGAGATGTAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: PHTWTELLPRGDGPA*LNRLLGPLPLRCRG Trigger: ACCTCTACATCTCAAAGGCAGTGGTCCTAGCAGCCTGTTTAGTCATGCTGGCCCATCTCCCCTAGGCAGAAGTTCAGTCCATGTGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR TCA 90 bp | AAGAGGGGTGCAGTGCCCTGTCTCTATGGCAAGCAAACAAGTCTGTaGGGTGGTGCACAGAAAGGAAGGTGCTCCCTCTTCAAGGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: KRGAVPCLYGKQTSL*GGAQKGRCSLFKEK Trigger: CTTCTCCTTGAAGAGGGAGCACCTTCCTTTCTGTGCACCACCTCACAGACTTGTTTGCTTGCCATAGAGACAGGGCACTGCACCCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CCA 90 bp | AAGAACACGTTCTCCCATCCACCATGGCTCAGACTGAACCTTCACTaGGAAGTAGGGGGTGAGGTGCTAAATCAGGGTGGGTATTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: KNTFSHPPWLRLNLH*EVGGEVLNQGGYCF Trigger: AAAGCAATACCCACCCTGATTTAGCACCTCACCCCCTACTTCCCAGTGAAGGTTCAGTCTGAGCCATGGTGGATGGGAGAACGTGTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CCA 90 bp | GGGTGCAGTGCCCTGTCTCTATGGCAAGCAAACAAGTCTGTGAGGTaGTGCACAGAAAGGAAGGTGCTCCCTCTTCAAGGAGAAGATTTT | + |
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Preference number: 1 (lower is better) Translates to: GCSALSLWQANKSVR*CTERKVLPLQGEDF Trigger: AAAATCTTCTCCTTGAAGAGGGAGCACCTTCCTTTCTGTGCACCACCTCACAGACTTGTTTGCTTGCCATAGAGACAGGGCACTGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR TCA 90 bp | AGAACAAAGCACCCTAAAGAAGAGCAGAGCTGCAGACTTGACGTATaGGGGGAGGGTTTGGTTGGAATTAGGCCTGGTACATCAGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: RTKHPKEEQSCRLDV*GEGLVGIRPGTSVP Trigger: TGGGACTGATGTACCAGGCCTAATTCCAACCAAACCCTCCCCTCATACGTCAAGTCTGCAGCTCTGCTCTTCTTTAGGGTGCTTTGTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR GCA 90 bp | CTTCACTGGGAAGTAGGGGGTGAGGTGCTAAATCAGGGTGGGTATTaGTTTAGCATTTTGCAATCATTATTTCTCCTTGCTCTGCTCACC | + |
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Preference number: 1 (lower is better) Translates to: LHWEVGGEVLNQGGY*FSILQSLFLLALLT Trigger: GGTGAGCAGAGCAAGGAGAAATAATGATTGCAAAATGCTAAAGCAATACCCACCCTGATTTAGCACCTCACCCCCTACTTCCCAGTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR GCA 90 bp | GAAAGAAAAGCTATGCATCGTGGGCATTTCTCAACCTGCCTTCACTaGCACAAAGCTTCTCTCCTTGTTGCTGATCAAGTGCAGTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: ERKAMHRGHFSTCLH*HKASLLVADQVQFK Trigger: TTTAAACTGCACTTGATCAGCAACAAGGAGAGAAGCTTTGTGGCAGTGAAGGCAGGTTGAGAAATGCCCACGATGCATAGCTTTTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CCA 90 bp | AGGATCCAGGTGGTTGCAAAATCTAGCGAACAGCATTGGACACCATaGCTCTGTCTTCTCAGTACAGATATCTTTCTGTTTGTTATTCTT | + |
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Preference number: 1 (lower is better) Translates to: RIQVVAKSSEQHWTP*LCLLSTDIFLFVIL Trigger: AAGAATAACAAACAGAAAGATATCTGTACTGAGAAGACAGAGCCATGGTGTCCAATGCTGTTCGCTAGATTTTGCAACCACCTGGATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CAA 90 bp | CCCAGAAATCCGGATGAGGGGTATCGGCAAACAGGATCCAGGTGGTaGCAAAATCTAGCGAACAGCATTGGACACCATGGCTCTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: PRNPDEGYRQTGSRW*QNLANSIGHHGSVF Trigger: GAAGACAGAGCCATGGTGTCCAATGCTGTTCGCTAGATTTTGCAACCACCTGGATCCTGTTTGCCGATACCCCTCATCCGGATTTCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR GCA 90 bp | GGACCACTGCCTTTGAGATGTAGAGGTTTGCCAGTAAGGAACACCCATCCATTCCTGGGCCTCTCAGAGTaGCTACTCCCTTTGAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: GPLPLRCRGLPVRNTHPFLGLSE*LLPLSS Trigger: AGAACTCAAAGGGAGTAGGCACTCTGAGAGGCCCAG...GAATGGATGGGTGTTCCTTACTGGCAAACCTCTACATCTCAAAGGCAGTGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CAA 90 bp | GGCATTTCTCAACCTGCCTTCACTGCCACAAAGCTTCTCTCCTTGTaGCTGATCAAGTGCAGTTTAAACGGACATACAGCGAAGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: GISQPAFTATKLLSL*LIKCSLNGHTAKEG Trigger: CCCTTCCTTCGCTGTATGTCCGTTTAAACTGCACTTGATCAGCAACAAGGAGAGAAGCTTTGTGGCAGTGAAGGCAGGTTGAGAAATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CAA 90 bp | ATGATGCCCATAATTATCCTGGGCCTCTCAGAGTGCCTACTCCCTTaGAGTTCTCTGTTGTACACAGGGAAAGGAGGAATCTCCCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: MMPIIILGLSECLLP*SSLLYTGKGGISQK Trigger: TTTCTGGGAGATTCCTCCTTTCCCTGTGTACAACAGAGAACTCAAAGGGAGTAGGCACTCTGAGAGGCCCAGGATAATTATGGGCATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR TCA 90 bp | CACAACAGAAGGAAAGAAAAGGAGTCTCCCCACACATGGACTGAACTTCTGCCTAGTGCCTACTCCCTTTaGGTTCTCTGTTGTACACAG | + |
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Preference number: 2 (lower is better) Translates to: HNRRKEKESPHTWTELLPSAYSL*VLCCTQ Trigger: CTGTGTACAACAGAGAACTCAAAGGGAGTAGGCACT...AGGCAGAAGTTCAGTCCATGTGTGGGGAGACTCCTTTTCTTTCCTTCTGTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR CCA 90 bp | ATCATTGAACATATTGAAAATGAGACTGTCAGGCGGGCCCATTCTATAGGTCAGAGGAAGGGTTGGCAGTaGTTTCCTGGCAGCAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: IIEHIENETVRRAHSIGQRKGWQ*FPGSSG Trigger: ACCACTGCTGCCAGGAAACCACTGCCAACCCTTCCT...CTGACCTATAGAATGGGCCCGCCTGACAGTCTCATTTTCAATATGTTCAATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGACCCAGTGCATGTCACCTACATTTCTTCAGCACCTTTTAACTCCAAACCCAGCCCGGTCTATATaGTGGGGCTATATAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: QRTQCMSPTFLQHLLTPNPARSI*WGYIER Trigger: TCTCTCTATATAGCCCCACCATATAGACCGGGCTGG...GTTTGGAGTTAAAAGGTGCTGAAGAAATGTAGGTGACATGCACTGGGTCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGACCCAGTGCATGTCACCTACATTTCTTCAGCACCTTTTAACTCCAAACGAAGGCAGAGGCAAGTaGATCTCTGAGTTCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: QRTQCMSPTFLQHLLTPNEGRGK*ISEFKA Trigger: GGCTTTGAACTCAGAGATCCACTTGCCTCTGCCTTC...GTTTGGAGTTAAAAGGTGCTGAAGAAATGTAGGTGACATGCACTGGGTCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR CCA 90 bp | TTGCCAACTATGACGTTTTACTTTGTGCCTATACGTCACTCAATATATCCCACTCAGCGAAGGAAGGGTTaGCAGTGGTTTCCTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LPTMTFYFVPIRHSIYPTQRRKG*QWFPGS Trigger: GCTGCCAGGAAACCACTGCCAACCCTTCCTTCGCTG...AGTGGGATATATTGAGTGACGTATAGGCACAAAGTAAAACGTCATAGTTGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR GCA 90 bp | ATCATTGAACATATTGAAAATGAGACTGTCAGGCGGGCCCATTCTATAGGTCAGTCACTCAGAAGCATCTaGCCCATAGAGGAGTTGTCG | + |
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Preference number: 2 (lower is better) Translates to: IIEHIENETVRRAHSIGQSLRSI*PIEELS Trigger: CGACAACTCCTCTATGGGGCAGATGCTTCTGAGTGA...CTGACCTATAGAATGGGCCCGCCTGACAGTCTCATTTTCAATATGTTCAATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGTTTACCTTAAAGGTGTCAAAGGACCCAGTGCATGTCACCTACATTTCTGGGCATTTCTCAACCTaGCTTCACTGCCACAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: RKFTLKVSKDPVHVTYISGHFST*LHCHKA Trigger: AGCTTTGTGGCAGTGAAGGCAGGTTGAGAAATGCCC...AGAAATGTAGGTGACATGCACTGGGTCCTTTGACACCTTTAAGGTAAACTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGCTATGCATCGTGGGCATTTCTCAACCTGCCTTCACTGCCACAAAGCTTCTTCAGCTTCCTCTTTGTaGCCAATGATGCCCATAATT | + |
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Preference number: 2 (lower is better) Translates to: KAMHRGHFSTCLHCHKASSASSL*PMMPII Trigger: AATTATGGGCATCATTGGCCACAAAGAGGAAGCTGA...AGAAGCTTTGTGGCAGTGAAGGCAGGTTGAGAAATGCCCACGATGCATAGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CAA 90 bp | GGTGGTGCACAGAAAGGAAGGTGCTCCCTCTTCAAGGAGAAGATTTaGAGGTTCACAAGACATAACACAACAGAAGGAAAGAAAAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: GGAQKGRCSLFKEKI*RFTRHNTTEGKKRS Trigger: ACTCCTTTTCTTTCCTTCTGTTGTGTTATGTCTTGTGAACCTCAAAATCTTCTCCTTGAAGAGGGAGCACCTTCCTTTCTGTGCACCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR TCA 90 bp | AACTATGACGTTTTACTTTGTGCCTATACGTCACTCAATATATCCCACTATACTTCCTGGCAGCAGTGGTaGCTGGTGACAGAAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: NYDVLLCAYTSLNISHYTSWQQW*LVTEGT Trigger: TGTCCCTTCTGTCACCAGTCACCACTGCTGCCAGGA...AGTATAGTGGGATATATTGAGTGACGTATAGGCACAAAGTAAAACGTCATAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTGTCTCTATGGCAAGCAAACAAGTCTGTGAGGTGGTGCACAGAAAGGAATCAAGGAGAAGATTTTaGGGTTCACAAGACATAACA | + |
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Preference number: 2 (lower is better) Translates to: CPVSMASKQVCEVVHRKESRRRF*GSQDIT Trigger: TGTTATGTCTTGTGAACCTCAAAATCTTCTCCTTGA...TTCCTTTCTGTGCACCACCTCACAGACTTGTTTGCTTGCCATAGAGACAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR GCA 90 bp | GGACCACTGCCTTTGAGATGTAGAGGTTTGCCAGTAAGGAACACCCATCCATTCAATCAGGGTGGGTATTaGTTTAGCATTTTGCAATCA | + |
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Preference number: 2 (lower is better) Translates to: GPLPLRCRGLPVRNTHPFNQGGY*FSILQS Trigger: TGATTGCAAAATGCTAAAGCAATACCCACCCTGATT...GAATGGATGGGTGTTCCTTACTGGCAAACCTCTACATCTCAAAGGCAGTGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGTTTACCTTAAAGGTGTCAAAGGACCCAGTGCATGTCACCTACATTTCTCAGCATTGGACACCATaGCTCTGTCTTCTCAGTACA | + |
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Preference number: 2 (lower is better) Translates to: RKFTLKVSKDPVHVTYISQHWTP*LCLLST Trigger: TGTACTGAGAAGACAGAGCCATGGTGTCCAATGCTG...AGAAATGTAGGTGACATGCACTGGGTCCTTTGACACCTTTAAGGTAAACTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR TCA 90 bp | AACTATGACGTTTTACTTTGTGCCTATACGTCACTCAATATATCCCACTATACTAGCAGTGGTGACTGGTaGCAGAAGGGACATTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: NYDVLLCAYTSLNISHYTSSGDW*QKGHLW Trigger: CCACAAATGTCCCTTCTGTCACCAGTCACCACTGCT...AGTATAGTGGGATATATTGAGTGACGTATAGGCACAAAGTAAAACGTCATAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CAA 90 bp | ATCAGGGTGGGTATTGCTTTAGCATTTTGCAATCATTATTTCTCCTaGCTCTGCTCACCTTCTCTGGGGACCAGAATCATTGAACATATT | + |
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Preference number: 2 (lower is better) Translates to: IRVGIALAFCNHYFS*LCSPSLGTRIIEHI Trigger: AATATGTTCAATGATTCTGGTCCCCAGAGAAGGTGAGCAGAGCAAGGAGAAATAATGATTGCAAAATGCTAAAGCAATACCCACCCTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CAA 90 bp | ATTGGACACCATGGCTCTGTCTTCTCAGTACAGATATCTTTCTGTTaGTTATTCTTATTTAGCTATCCAAATATGTTTCTTAAGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: IGHHGSVFSVQISFC*LFLFSYPNMFLKWA Trigger: TGCCCACTTAAGAAACATATTTGGATAGCTAAATAAGAATAACAAACAGAAAGATATCTGTACTGAGAAGACAGAGCCATGGTGTCCAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR GCA 72 bp | CACGGGGCCCGGAGGGCCACAGAGCCTCAAGAGGGGTaGAGTGCCCTGTCTCTATGGCAAGCAAACAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: HGARRATEPQEG*SALSLWQANKS Trigger: AGACTTGTTTGCTTGCCATAGAGACAGGGCACTGCACCCCTCTTGAGGCTCTGTGGCCCTCCGGGCCCCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR GCA 72 bp | GGCCCGGAGGGCCACAGAGCCTCAAGAGGGGTGCAGTaGCCTGTCTCTATGGCAAGCAAACAAGTCTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: GPEGHRASRGVQ*PVSMASKQVCE Trigger: CTCACAGACTTGTTTGCTTGCCATAGAGACAGGGCACTGCACCCCTCTTGAGGCTCTGTGGCCCTCCGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR TCA 72 bp | ATCCCAGCTCTCAGAAGGCAGAGGCAAGTGGATCTCTaGGTTCAAAGCCAGCCCGGTCTATATGGTGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: IPALRRQRQVDL*VQSQPGLYGGA Trigger: AGCCCCACCATATAGACCGGGCTGGCTTTGAACTCAGAGATCCACTTGCCTCTGCCTTCTGAGAGCTGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR TCA 72 bp | GGTTGGCAGTGGTTTCCTGGCAGCAGTGGTGACTGGTaGCAGAAGGGACATTTGTGGGAGGCCTTGGTGATA | + |
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Preference number: 3 (lower is better) Translates to: GWQWFPGSSGDW*QKGHLWEALVI Trigger: TATCACCAAGGCCTCCCACAAATGTCCCTTCTGTCACCAGTCACCACTGCTGCCAGGAAACCACTGCCAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR TCA 72 bp | AAGGAAGGGTTGGCAGTGGTTTCCTGGCAGCAGTGGTaGCTGGTGACAGAAGGGACATTTGTGGGAGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: KEGLAVVSWQQW*LVTEGTFVGGL Trigger: AAGGCCTCCCACAAATGTCCCTTCTGTCACCAGTCACCACTGCTGCCAGGAAACCACTGCCAACCCTTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR CAA 90 bp | CGGACATACAGCGAAGGAAGGGTTGGCAGTGGTTTCCTGGCAGCAGTGGTGACTACAGGATCCAGGTGGTaGCAAAATCTAGCGAACAGC | + |
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Preference number: 3 (lower is better) Translates to: RTYSEGRVGSGFLAAVVTTGSRW*QNLANS Trigger: GCTGTTCGCTAGATTTTGCAACCACCTGGATCCTGT...AGTCACCACTGCTGCCAGGAAACCACTGCCAACCCTTCCTTCGCTGTATGTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR TCA 72 bp | AGTGGCTCACACGTGAGAACCAGGACATTGGGCTGCTaGAAGAACACGTTCTCCCATCCACCATGGCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: SGSHVRTRTLGC*KNTFSHPPWLR Trigger: TCTGAGCCATGGTGGATGGGAGAACGTGTTCTTTCAGCAGCCCAATGTCCTGGTTCTCACGTGTGAGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR TCA 72 bp | TGGACTGAACTTCTGCCTAGGGGAGATGGGCCAGCATaGCTAAACAGGCTGCTAGGACCACTGCCTTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: WTELLPRGDGPA*LNRLLGPLPLR Trigger: TCTCAAAGGCAGTGGTCCTAGCAGCCTGTTTAGTCATGCTGGCCCATCTCCCCTAGGCAGAAGTTCAGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR TCA 72 bp | GCAGTGCCCTGTCTCTATGGCAAGCAAACAAGTCTGTaGGGTGGTGCACAGAAAGGAAGGTGCTCCCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: AVPCLYGKQTSL*GGAQKGRCSLF Trigger: GAAGAGGGAGCACCTTCCTTTCTGTGCACCACCTCACAGACTTGTTTGCTTGCCATAGAGACAGGGCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CCA 72 bp | TTGGTTGGAATTAGGCCTGGTACATCAGTCCCAGAGTaGCTCACACGTGAGAACCAGGACATTGGGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: LVGIRPGTSVPE*LTRENQDIGLL Trigger: CAGCAGCCCAATGTCCTGGTTCTCACGTGTGAGCCACTCTGGGACTGATGTACCAGGCCTAATTCCAACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CCA 72 bp | ACAGAGCCTCAAGAGGGGTGCAGTGCCCTGTCTCTATaGCAAGCAAACAAGTCTGTGAGGTGGTGCACAGAA | + |
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Preference number: 3 (lower is better) Translates to: TEPQEGCSALSL*QANKSVRWCTE Trigger: TTCTGTGCACCACCTCACAGACTTGTTTGCTTGCCATAGAGACAGGGCACTGCACCCCTCTTGAGGCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR CAA 90 bp | CGGACATACAGCGAAGGAAGGGTTGGCAGTGGTTTCCTGGCAGCAGTGGTGACTCCTTTGAGTTCTCTGTaGTACACAGGGAAAGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: RTYSEGRVGSGFLAAVVTPLSSL*YTGKGG Trigger: TCCTCCTTTCCCTGTGTACAACAGAGAACTCAAAGG...AGTCACCACTGCTGCCAGGAAACCACTGCCAACCCTTCCTTCGCTGTATGTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CCA 72 bp | GCCCTGTCTCTATGGCAAGCAAACAAGTCTGTGAGGTaGTGCACAGAAAGGAAGGTGCTCCCTCTTCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: ALSLWQANKSVR*CTERKVLPLQG Trigger: TCCTTGAAGAGGGAGCACCTTCCTTTCTGTGCACCACCTCACAGACTTGTTTGCTTGCCATAGAGACAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR TCA 72 bp | CACCCTAAAGAAGAGCAGAGCTGCAGACTTGACGTATaGGGGGAGGGTTTGGTTGGAATTAGGCCTGGTACA | + |
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Preference number: 3 (lower is better) Translates to: HPKEEQSCRLDV*GEGLVGIRPGT Trigger: TGTACCAGGCCTAATTCCAACCAAACCCTCCCCTCATACGTCAAGTCTGCAGCTCTGCTCTTCTTTAGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR-3UTR CAA 90 bp | CACAACAGAAGGAAAGAAAAGGAGTCTCCCCACACATGGACTGAACTTCTGCCTGAGGGGAGGGTTTGGTaGGAATTAGGCCTGGTACAT | + |
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Preference number: 3 (lower is better) Translates to: HNRRKEKESPHTWTELLPEGRVW*ELGLVH Trigger: ATGTACCAGGCCTAATTCCAACCAAACCCTCCCCTC...AGGCAGAAGTTCAGTCCATGTGTGGGGAGACTCCTTTTCTTTCCTTCTGTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR GCA 72 bp | CCAATGATGCCCATAATTATCCTGGGCCTCTCAGAGTaGCTACTCCCTTTGAGTTCTCTGTTGTACACAGGG | + |
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Preference number: 3 (lower is better) Translates to: PMMPIIILGLSE*LLPLSSLLYTG Trigger: CCCTGTGTACAACAGAGAACTCAAAGGGAGTAGGCACTCTGAGAGGCCCAGGATAATTATGGGCATCATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR GCA 72 bp | GCTATGCATCGTGGGCATTTCTCAACCTGCCTTCACTaGCACAAAGCTTCTCTCCTTGTTGCTGATCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: AMHRGHFSTCLH*HKASLLVADQV Trigger: CACTTGATCAGCAACAAGGAGAGAAGCTTTGTGGCAGTGAAGGCAGGTTGAGAAATGCCCACGATGCATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR GCA 72 bp | CTGTCTCTATGGCAAGCAAACAAGTCTGTGAGGTGGTaGACAGAAAGGAAGGTGCTCCCTCTTCAAGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSLWQANKSVRW*TERKVLPLQGE Trigger: TTCTCCTTGAAGAGGGAGCACCTTCCTTTCTGTGCACCACCTCACAGACTTGTTTGCTTGCCATAGAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGTTTACCTTAAAGGTGTCAAAGGACCCAGTGCATGTCACCTACATTTCTACAGCGAAGGAAGGGTaGGCAGTGGTTTCCTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RKFTLKVSKDPVHVTYISTAKEG*AVVSWQ Trigger: CTGCCAGGAAACCACTGCCAACCCTTCCTTCGCTGT...AGAAATGTAGGTGACATGCACTGGGTCCTTTGACACCTTTAAGGTAAACTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGGACATTGGGCTGCTGAAAGAACACGTTCTCCCATCCACCATGGCTCAGACTAATCATTATTTCTCCTaGCTCTGCTCACCTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QDIGLLKEHVLPSTMAQTNHYFS*LCSPSL Trigger: CAGAGAAGGTGAGCAGAGCAAGGAGAAATAATGATT...AGTCTGAGCCATGGTGGATGGGAGAACGTGTTCTTTCAGCAGCCCAATGTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| 3UTR GCA 72 bp | GAAAGAAAAGCTATGCATCGTGGGCATTTCTCAACCTaGCTTCACTGCCACAAAGCTTCTCTCCTTGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ERKAMHRGHFST*LHCHKASLLVA Trigger: AGCAACAAGGAGAGAAGCTTTGTGGCAGTGAAGGCAGGTTGAGAAATGCCCACGATGCATAGCTTTTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| 3UTR TCA 72 bp | ACTGGTGACAGAAGGGACATTTGTGGGAGGCCTTGGTaGTACCAACAGGATGGAAAGATAATCAAGGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: TGDRRDICGRPW*YQQDGKIIKDK Trigger: TTTGTCCTTGATTATCTTTCCATCCTGTTGGTATCACCAAGGCCTCCCACAAATGTCCCTTCTGTCACCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCTGTCTCTATGGCAAGCAAACAAGTCTGTGAGGTGGTGCACAGAAAGGAATGGGGACCAGAATCATaGAACATATTGAAAATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CPVSMASKQVCEVVHRKEWGPES*NILKMR Trigger: TCTCATTTTCAATATGTTCAATGATTCTGGTCCCCA...TTCCTTTCTGTGCACCACCTCACAGACTTGTTTGCTTGCCATAGAGACAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| 3UTR CCA 72 bp | GTGGTTGCAAAATCTAGCGAACAGCATTGGACACCATaGCTCTGTCTTCTCAGTACAGATATCTTTCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VVAKSSEQHWTP*LCLLSTDIFLF Trigger: AAACAGAAAGATATCTGTACTGAGAAGACAGAGCCATGGTGTCCAATGCTGTTCGCTAGATTTTGCAACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCAACTATGACGTTTTACTTTGTGCCTATACGTCACTCAATATATCCCACTACAAAGCTTCTCTCCTaGTTGCTGATCAAGTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LPTMTFYFVPIRHSIYPTTKLLS*LLIKCS Trigger: ACTGCACTTGATCAGCAACAAGGAGAGAAGCTTTGT...AGTGGGATATATTGAGTGACGTATAGGCACAAAGTAAAACGTCATAGTTGGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| 3UTR CCA 72 bp | GCAATCATTATTTCTCCTTGCTCTGCTCACCTTCTCTaGGGACCAGAATCATTGAACATATTGAAAATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: AIIISPCSAHLL*GPESLNILKMR Trigger: TCTCATTTTCAATATGTTCAATGATTCTGGTCCCCAGAGAAGGTGAGCAGAGCAAGGAGAAATAATGATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| 3UTR TCA 72 bp | CTTCAGCACCTTTTAACTCCAAACATTTGCCAACTATaGCGTTTTACTTTGTGCCTATACGTCACTCAATAT | + |
|
Preference number: 3 (lower is better) Translates to: LQHLLTPNICQL*RFTLCLYVTQY Trigger: ATATTGAGTGACGTATAGGCACAAAGTAAAACGTCATAGTTGGCAAATGTTTGGAGTTAAAAGGTGCTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | CGGACATACAGCGAAGGAAGGGTTGGCAGTGGTTTCCTGGCAGCAGTGGTGACTCTCCTGCTCGCCCTCTaGGCAGGAAGTGAGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTYSEGRVGSGFLAAVVTLLLAL*AGSEHL Trigger: GAGGTGCTCACTTCCTGCCCAGAGGGCGAGCAGGAG...AGTCACCACTGCTGCCAGGAAACCACTGCCAACCCTTCCTTCGCTGTATGTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR TCA 90 bp | CAGGACATTGGGCTGCTGAAAGAACACGTTCTCCCATCCACCATGGCTCAGACTAACTGGCGGTACAGCTaGGCCTCGCTCAGCTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QDIGLLKEHVLPSTMAQTNWRYS*ASLSSP Trigger: CGGGGAGCTGAGCGAGGCTCAGCTGTACCGCCAGTT...AGTCTGAGCCATGGTGGATGGGAGAACGTGTTCTTTCAGCAGCCCAATGTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR GCA 90 bp | CGGACATACAGCGAAGGAAGGGTTGGCAGTGGTTTCCTGGCAGCAGTGGTGACTGGTGGCCCAAGGAGTTaGTCCAGACTTCCGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTYSEGRVGSGFLAAVVTGGPRS*SRLPCR Trigger: CCTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACC...AGTCACCACTGCTGCCAGGAAACCACTGCCAACCCTTCCTTCGCTGTATGTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | CGGACATACAGCGAAGGAAGGGTTGGCAGTGGTTTCCTGGCAGCAGTGGTGACTCTGGATCAGCTCTTCTaGGGTATTGCCCAGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTYSEGRVGSGFLAAVVTLDQLF*GIAQWG Trigger: CCCCCACTGGGCAATACCCCAGAAGAGCTGATCCAG...AGTCACCACTGCTGCCAGGAAACCACTGCCAACCCTTCCTTCGCTGTATGTCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR GCA 90 bp | AACCAGGACATTGGGCTGCTGAAAGAACACGTTCTCCCATCCACCATGGCTCAGAGGTGGCACAGACGGTaGAAGCTGTGGTGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NQDIGLLKEHVLPSTMAQRWHRR*KLWWLL Trigger: CAGGAGCCACCACAGCTTGCACCGTCTGTGCCACCT...CTGAGCCATGGTGGATGGGAGAACGTGTTCTTTCAGCAGCCCAATGTCCTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | CACAACAGAAGGAAAGAAAAGGAGTCTCCCCACACATGGACTGAACTTCTGCCTTGCTGGGCTCAAGGCTaGGCTCAGCCACCCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HNRRKEKESPHTWTELLPCWAQG*AQPPHS Trigger: GGAGTGGGGTGGCTGAGCCCAGCCTTGAGCCCAGCA...AGGCAGAAGTTCAGTCCATGTGTGGGGAGACTCCTTTTCTTTCCTTCTGTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR GCA 90 bp | AAAGCTATGCATCGTGGGCATTTCTCAACCTGCCTTCACTGCCACAAAGCTTCTGGCTACCAGAGCGCATaGTGGGCTCAAGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KAMHRGHFSTCLHCHKASGYQSA*WAQGWA Trigger: AGCCCAGCCTTGAGCCCAGCATGCGCTCTGGTAGCC...AGAAGCTTTGTGGCAGTGAAGGCAGGTTGAGAAATGCCCACGATGCATAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | AAAGCTATGCATCGTGGGCATTTCTCAACCTGCCTTCACTGCCACAAAGCTTCTCGGCGACTGTACCGGTaGTGCAACTGCACCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KAMHRGHFSTCLHCHKASRRLYR*CNCTRV Trigger: GACCCTGGTGCAGTTGCACCACCGGTACAGTCGCCG...AGAAGCTTTGTGGCAGTGAAGGCAGGTTGAGAAATGCCCACGATGCATAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | CGGACATACAGCGAAGGAAGGGTTGGCAGTGGTTTCCTGGCAGCAGTGGTGACTTGTTGCTGCCCAATGTaGAACATCTCCAAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTYSEGRVGSGFLAAVVTCCCPM*NISKSW Trigger: CCAGCTCTTGGAGATGTTCCACATTGGGCAGCAACA...AGTCACCACTGCTGCCAGGAAACCACTGCCAACCCTTCCTTCGCTGTATGTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | AACCAGGACATTGGGCTGCTGAAAGAACACGTTCTCCCATCCACCATGGCTCAGAGCACCTCCTTTGCCTaGAAATCGGCTGAGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NQDIGLLKEHVLPSTMAQSTSFA*KSAEPR Trigger: TCTCGGCTCAGCCGATTTCCAGGCAAAGGAGGTGCT...CTGAGCCATGGTGGATGGGAGAACGTGTTCTTTCAGCAGCCCAATGTCCTGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | AAAGCCAGCCCGGTCTATATGGTGGGGCTATATAGAGAGATCCAGTCTCAAAAACGGTGCAAGCTGTGGTaGCTCCTGCTCGCCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KASPVYMVGLYREIQSQKRCKLW*LLLALW Trigger: CCAGAGGGCGAGCAGGAGCCACCACAGCTTGCACCG...TTTTTGAGACTGGATCTCTCTATATAGCCCCACCATATAGACCGGGCTGGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| 3UTR CAA 72 bp | CCGGATGAGGGGTATCGGCAAACAGGATCCAGGTGGTaGCAAAATCTAGCGAACAGCATTGGACACCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PDEGYRQTGSRW*QNLANSIGHHG Trigger: GCCATGGTGTCCAATGCTGTTCGCTAGATTTTGCAACCACCTGGATCCTGTTTGCCGATACCCCTCATCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR GCA 90 bp | AAAGCCAGCCCGGTCTATATGGTGGGGCTATATAGAGAGATCCAGTCTCAAAAACGACTGTACCGGTGGTaGAACTGCACCAGGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KASPVYMVGLYREIQSQKRLYRW*NCTRVP Trigger: GGGGACCCTGGTGCAGTTGCACCACCGGTACAGTCG...TTTTTGAGACTGGATCTCTCTATATAGCCCCACCATATAGACCGGGCTGGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR GCA 90 bp | AAAGCTATGCATCGTGGGCATTTCTCAACCTGCCTTCACTGCCACAAAGCTTCTGCTCTTCTGGGGTATTaGCCAGTGGGGGAAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KAMHRGHFSTCLHCHKASALLGY*PVGEAA Trigger: GGCTGCTTCCCCCACTGGGCAATACCCCAGAAGAGC...AGAAGCTTTGTGGCAGTGAAGGCAGGTTGAGAAATGCCCACGATGCATAGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| 3UTR CAA 72 bp | AGGCTGCTAGGACCACTGCCTTTGAGATGTAGAGGTTaGCCAGTAAGGAACACCCATCCATTCAAGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLLGPLPLRCRG*PVRNTHPFKPA Trigger: GGCTGGCTTGAATGGATGGGTGTTCCTTACTGGCAAACCTCTACATCTCAAAGGCAGTGGTCCTAGCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR TCA 90 bp | CCTTGCTCTGCTCACCTTCTCTGGGGACCAGAATCATTGAACATATTGAAAATGCCTGCACGGTGGTGGTaGACTGGCGGTACAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PCSAHLLWGPESLNILKMPARWW*TGGTAE Trigger: CTCAGCTGTACCGCCAGTTCACCACCACCGTGCAGG...CATTTTCAATATGTTCAATGATTCTGGTCCCCAGAGAAGGTGAGCAGAGCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | AAAGCCAGCCCGGTCTATATGGTGGGGCTATATAGAGAGATCCAGTCTCAAAAAAGAGTCCACTGTGCCTaGAGGTGGCACAGACGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KASPVYMVGLYREIQSQKRVHCA*RWHRRC Trigger: GCACCGTCTGTGCCACCTCCAGGCACAGTGGACTCT...TTTTTGAGACTGGATCTCTCTATATAGCCCCACCATATAGACCGGGCTGGCTTT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR TCA 90 bp | AAAGCCAGCCCGGTCTATATGGTGGGGCTATATAGAGAGATCCAGTCTCAAAAAATCCACCAGCAACAGTaGGGGCTGCTGCTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KASPVYMVGLYREIQSQKIHQQQ*GLLLRM Trigger: CATCCTGAGCAGCAGCCCTCACTGTTGCTGGTGGAT...TTTTTGAGACTGGATCTCTCTATATAGCCCCACCATATAGACCGGGCTGGCTTT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGGACCCAGTGCATGTCACCTACATTTCTTCAGCACCTTTTAACTCCAAACCCTCTGGGCAGGAAGTaGGCACCTCCTTTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRTQCMSPTFLQHLLTPNPLGRK*APPLPG Trigger: TCCAGGCAAAGGAGGTGCTCACTTCCTGCCCAGAGG...GTTTGGAGTTAAAAGGTGCTGAAGAAATGTAGGTGACATGCACTGGGTCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR GCA 90 bp | CGGACATACAGCGAAGGAAGGGTTGGCAGTGGTTTCCTGGCAGCAGTGGTGACTTCACTTTATTGTTTCTaGTCATCTTCCGTTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RTYSEGRVGSGFLAAVVTSLYCF*SSSVPP Trigger: GGGTGGAACGGAAGATGAGCAGAAACAATAAAGTGA...AGTCACCACTGCTGCCAGGAAACCACTGCCAACCCTTCCTTCGCTGTATGTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | AAAGCCAGCCCGGTCTATATGGTGGGGCTATATAGAGAGATCCAGTCTCAAAAACAAACACAGGGACACTaGCCACCACTGCATGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KASPVYMVGLYREIQSQKQTQGH*PPLHEP Trigger: GGGCTCATGCAGTGGTGGCCAGTGTCCCTGTGTTTG...TTTTTGAGACTGGATCTCTCTATATAGCCCCACCATATAGACCGGGCTGGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | GGACCACTGCCTTTGAGATGTAGAGGTTTGCCAGTAAGGAACACCCATCCATTCAGAACATACACCAGGTaGCCCAAGGAGTTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPLPLRCRGLPVRNTHPFRTYTR*PKELLQ Trigger: CTGGAGCAACTCCTTGGGCCACCTGGTGTATGTTCT...GAATGGATGGGTGTTCCTTACTGGCAAACCTCTACATCTCAAAGGCAGTGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | TGCCCTGTCTCTATGGCAAGCAAACAAGTCTGTGAGGTGGTGCACAGAAAGGAACTGGGCACCTTTGTCTaGATCAGCTCTTCTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CPVSMASKQVCEVVHRKELGTFV*ISSSGV Trigger: TACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAG...TTCCTTTCTGTGCACCACCTCACAGACTTGTTTGCTTGCCATAGAGACAGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| 3UTR CAA 72 bp | CCTTGCTCTGCTCACCTTCTCTGGGGACCAGAATCATaGAACATATTGAAAATGAGACTGTCAGGCGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PCSAHLLWGPES*NILKMRLSGGP Trigger: GGGCCCGCCTGACAGTCTCATTTTCAATATGTTCAATGATTCTGGTCCCCAGAGAAGGTGAGCAGAGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR TCA 90 bp | GAGGCCTTGGTGATACCAACAGGATGGAAAGATAATCAAGGACAAAAAGGCTCCGCAGCCAAATGGCCGTaGGAAGCAAGAAGACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EALVIPTGWKDNQGQKGSAAKWP*EARRQR Trigger: CCTCTGTCTTCTTGCTTCTCACGGCCATTTGGCTGC...GGAGCCTTTTTGTCCTTGATTATCTTTCCATCCTGTTGGTATCACCAAGGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR GCA 90 bp | ATCATTGAACATATTGAAAATGAGACTGTCAGGCGGGCCCATTCTATAGGTCAGTACCGGTGGTGCAACTaGACCAGGGTCCCCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIEHIENETVRRAHSIGQYRWCN*TRVPTK Trigger: CTTGGTGGGGACCCTGGTGCAGTTGCACCACCGGTA...CTGACCTATAGAATGGGCCCGCCTGACAGTCTCATTTTCAATATGTTCAATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | CCTTGCTCTGCTCACCTTCTCTGGGGACCAGAATCATTGAACATATTGAAAATGGCACACAGACCACACTaGCACAAATCCCGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCSAHLLWGPESLNILKMAHRPH*HKSRSR Trigger: CCTGCTCCGGGATTTGTGCCAGTGTGGTCTGTGTGC...CATTTTCAATATGTTCAATGATTCTGGTCCCCAGAGAAGGTGAGCAGAGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | CAAAGGACCCAGTGCATGTCACCTACATTTCTTCAGCACCTTTTAACTCCAAACCTTTCTTCTTCTGGCTaGCACTCAGGGCCCTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRTQCMSPTFLQHLLTPNLSSSG*HSGPSG Trigger: TCCGGAGGGCCCTGAGTGCCAGCCAGAAGAAGAAAG...GTTTGGAGTTAAAAGGTGCTGAAGAAATGTAGGTGACATGCACTGGGTCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | CACAACAGAAGGAAAGAAAAGGAGTCTCCCCACACATGGACTGAACTTCTGCCTCCACCCTGTTCACTCTaGGCACCTTTGTCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: HNRRKEKESPHTWTELLPPPCSL*APLSGS Trigger: TGATCCAGACAAAGGTGCCCAGAGTGAACAGGGTGG...AGGCAGAAGTTCAGTCCATGTGTGGGGAGACTCCTTTTCTTTCCTTCTGTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| 3UTR CAA 72 bp | GAACAAAGCACCCTAAAGAAGAGCAGAGCTGCAGACTaGACGTATGAGGGGAGGGTTTGGTTGGAATTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQSTLKKSRAAD*TYEGRVWLELG Trigger: GCCTAATTCCAACCAAACCCTCCCCTCATACGTCAAGTCTGCAGCTCTGCTCTTCTTTAGGGTGCTTTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR TCA 90 bp | AAAGCTATGCATCGTGGGCATTTCTCAACCTGCCTTCACTGCCACAAAGCTTCTCAGAGGATAAAGGACTaGATAGTACCTGTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KAMHRGHFSTCLHCHKASQRIKD*IVPVQG Trigger: GCCCTGGACAGGTACTATTCAGTCCTTTATCCTCTG...AGAAGCTTTGTGGCAGTGAAGGCAGGTTGAGAAATGCCCACGATGCATAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR GCA 90 bp | GAGGCCTTGGTGATACCAACAGGATGGAAAGATAATCAAGGACAAAAAGGCTCCATGAAGATGACGACCTaGACGGTGGTGGTGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: EALVIPTGWKDNQGQKGSMKMTT*TVVVNW Trigger: CCAGTTCACCACCACCGTGCAGGTCGTCATCTTCAT...GGAGCCTTTTTGTCCTTGATTATCTTTCCATCCTGTTGGTATCACCAAGGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR GCA 90 bp | CACAACAGAAGGAAAGAAAAGGAGTCTCCCCACACATGGACTGAACTTCTGCCTTCCCCACCAAGCACTTaGGTACCGATTTGTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HNRRKEKESPHTWTELLPSPPST*VPICSQ Trigger: CTGTGAACAAATCGGTACGCAAGTGCTTGGTGGGGA...AGGCAGAAGTTCAGTCCATGTGTGGGGAGACTCCTTTTCTTTCCTTCTGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | CAGGACATTGGGCTGCTGAAAGAACACGTTCTCCCATCCACCATGGCTCAGACTCTAGCTCCCGAGACTTaGCATCAGATATTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QDIGLLKEHVLPSTMAQTLAPET*HQIFFS Trigger: AGAGAAAAATATCTGATGCCAAGTCTCGGGAGCTAG...AGTCTGAGCCATGGTGGATGGGAGAACGTGTTCTTTCAGCAGCCCAATGTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | AAGAACACGTTCTCCCATCCACCATGGCTCAGACTGAACCTTCACTGGGAAGTAAGATGTCAGCGACATTaGTCACAGCAAACACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNTFSHPPWLRLNLHWEVRCQRH*SQQTQG Trigger: TCCCTGTGTTTGCTGTGACCAATGTCGCTGACATCT...TACTTCCCAGTGAAGGTTCAGTCTGAGCCATGGTGGATGGGAGAACGTGTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | GGTCAGACTAACAAGTCCTGGGGCAGAATCACTTGTGCTAATAAAGGAAGTTTACCATGGAGAGCAGGGTaGCATGTAGCTCTGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQTNKSWGRITCANKGSLPWRAG*HVALPL Trigger: GAGAGGCAGAGCTACATGCCACCCTGCTCTCCATGG...TAAACTTCCTTTATTAGCACAAGTGATTCTGCCCCAGGACTTGTTAGTCTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | AAAGCCAGCCCGGTCTATATGGTGGGGCTATATAGAGAGATCCAGTCTCAAAAAATATCCCAGATTCCATaGGAGCTACTGGGGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: KASPVYMVGLYREIQSQKISQIP*ELLGTP Trigger: GGGTGTCCCCAGTAGCTCCCATGGAATCTGGGATAT...TTTTTGAGACTGGATCTCTCTATATAGCCCCACCATATAGACCGGGCTGGCTTT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CCA 90 bp | GGTCAGACTAACAAGTCCTGGGGCAGAATCACTTGTGCTAATAAAGGAAGTTTATGGGGTATTGCCCAGTaGGGGAAGCAGCCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQTNKSWGRITCANKGSLWGIAQ*GKQPLL Trigger: AAGAAGAGGCTGCTTCCCCCACTGGGCAATACCCCA...TAAACTTCCTTTATTAGCACAAGTGATTCTGCCCCAGGACTTGTTAGTCTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR GCA 90 bp | CACAACAGAAGGAAAGAAAAGGAGTCTCCCCACACATGGACTGAACTTCTGCCTGGCTTAAAGATCTGTTaGTGCCCAATGTGGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: HNRRKEKESPHTWTELLPGLKIC*CPMWNI Trigger: GATGTTCCACATTGGGCAGCAACAGATCTTTAAGCC...AGGCAGAAGTTCAGTCCATGTGTGGGGAGACTCCTTTTCTTTCCTTCTGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR CCA 90 bp | AGGAAGTTTACCTTAAAGGTGTCAAAGGACCCAGTGCATGTCACCTACATTTCTATGACTTTCTTCTTCTaGCTGGCACTCAGGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKFTLKVSKDPVHVTYISMTFFF*LALRAL Trigger: GAGGGCCCTGAGTGCCAGCCAGAAGAAGAAAGTCAT...AGAAATGTAGGTGACATGCACTGGGTCCTTTGACACCTTTAAGGTAAACTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR CCA 90 bp | CCTTGCTCTGCTCACCTTCTCTGGGGACCAGAATCATTGAACATATTGAAAATGAGAGATGGTGTTCTGTaGGGTCCTCAGTGCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PCSAHLLWGPESLNILKMRDGVL*GPQCSN Trigger: ATTGCTGCACTGAGGACCCCACAGAACACCATCTCT...CATTTTCAATATGTTCAATGATTCTGGTCCCCAGAGAAGGTGAGCAGAGCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR TCA 90 bp | GGTCAGACTAACAAGTCCTGGGGCAGAATCACTTGTGCTAATAAAGGAAGTTTACCCTCCGGATCAGGATaGGAAAGAGAAATACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GQTNKSWGRITCANKGSLPSGSG*EREIPQ Trigger: CTGTGGTATTTCTCTTTCTCATCCTGATCCGGAGGG...TAAACTTCCTTTATTAGCACAAGTGATTCTGCCCCAGGACTTGTTAGTCTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR TCA 90 bp | AAAGCCAGCCCGGTCTATATGGTGGGGCTATATAGAGAGATCCAGTCTCAAAAAGTACACTGCAGAGAATaGAAACTGTCACCATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KASPVYMVGLYREIQSQKVHCRE*KLSPWR Trigger: TCTCCATGGTGACAGTTTTCATTCTCTGCAGTGTAC...TTTTTGAGACTGGATCTCTCTATATAGCCCCACCATATAGACCGGGCTGGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR GCA 90 bp | CCTTGCTCTGCTCACCTTCTCTGGGGACCAGAATCATTGAACATATTGAAAATGGGCCCAAAGCCAAACTaGAGGGAATACTTATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PCSAHLLWGPESLNILKMGPKPN*REYLSG Trigger: TCCTGATAAGTATTCCCTGCAGTTTGGCTTTGGGCC...CATTTTCAATATGTTCAATGATTCTGGTCCCCAGAGAAGGTGAGCAGAGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR CCA 90 bp | GGTCAGACTAACAAGTCCTGGGGCAGAATCACTTGTGCTAATAAAGGAAGTTTAAGAAGAGCACAGGGTTaGCCAACAGAGAGACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQTNKSWGRITCANKGSLRRAQG*PTERLW Trigger: CCAAAGTCTCTCTGTTGGCCAACCCTGTGCTCTTCT...TAAACTTCCTTTATTAGCACAAGTGATTCTGCCCCAGGACTTGTTAGTCTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CAA 72 bp | TCTCAACCTGCCTTCACTGCCACAAAGCTTCTCTCCTaGTTGCTGATCAAGTGCAGTTTAAACGGACATACA | + |
|
Preference number: 4 (lower is better) Translates to: SQPAFTATKLLS*LLIKCSLNGHT Trigger: TGTATGTCCGTTTAAACTGCACTTGATCAGCAACAAGGAGAGAAGCTTTGTGGCAGTGAAGGCAGGTTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR TCA 90 bp | ATCATTGAACATATTGAAAATGAGACTGTCAGGCGGGCCCATTCTATAGGTCAGTTGACCATAACACCATaGAGTTTCCCAGTAGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IIEHIENETVRRAHSIGQLTITP*SFPVAS Trigger: GCTCGCTACTGGGAAACTTCATGGTGTTATGGTCAA...CTGACCTATAGAATGGGCCCGCCTGACAGTCTCATTTTCAATATGTTCAATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR TCA 90 bp | CCTTGCTCTGCTCACCTTCTCTGGGGACCAGAATCATTGAACATATTGAAAATGTCAGTGCAGCAATTATaGCTTTCTTCTTCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PCSAHLLWGPESLNILKMSVQQL*LSSSGW Trigger: CCAGCCAGAAGAAGAAAGTCATAATTGCTGCACTGA...CATTTTCAATATGTTCAATGATTCTGGTCCCCAGAGAAGGTGAGCAGAGCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR GCA 90 bp | AACTATGACGTTTTACTTTGTGCCTATACGTCACTCAATATATCCCACTATACTGTTCAGAGTCCACTGTaGCTGGAGGTGGCACAGACG | + |
|
Preference number: 4 (lower is better) Translates to: NYDVLLCAYTSLNISHYTVQSPL*LEVAQT Trigger: CGTCTGTGCCACCTCCAGGCACAGTGGACTCTGAAC...AGTATAGTGGGATATATTGAGTGACGTATAGGCACAAAGTAAAACGTCATAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR TCA 90 bp | AACTATGACGTTTTACTTTGTGCCTATACGTCACTCAATATATCCCACTATACTCTGGCCACCACTGCATaGGCCCAGATGTACATCACT | + |
|
Preference number: 4 (lower is better) Translates to: NYDVLLCAYTSLNISHYTLATTA*AQMYIT Trigger: AGTGATGTACATCTGGGCTCATGCAGTGGTGGCCAG...AGTATAGTGGGATATATTGAGTGACGTATAGGCACAAAGTAAAACGTCATAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR GCA 90 bp | GGTCAGACTAACAAGTCCTGGGGCAGAATCACTTGTGCTAATAAAGGAAGTTTACTGTGGGGTCCTCAGTaGAGCAATTATGACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQTNKSWGRITCANKGSLLWGPQ*SNYDFL Trigger: AAGAAAGTCATAATTGCTGCACTGAGGACCCCACAG...TAAACTTCCTTTATTAGCACAAGTGATTCTGCCCCAGGACTTGTTAGTCTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR GCA 90 bp | CAAAGGACCCAGTGCATGTCACCTACATTTCTTCAGCACCTTTTAACTCCAAACTTAAAGATCTGTTGCTaGCCAATGTGGAACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRTQCMSPTFLQHLLTPNLKICC*PMWNIS Trigger: GGAGATGTTCCACATTGGGCAGCAACAGATCTTTAA...GTTTGGAGTTAAAAGGTGCTGAAGAAATGTAGGTGACATGCACTGGGTCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR CCA 90 bp | TGCCCTGTCTCTATGGCAAGCAAACAAGTCTGTGAGGTGGTGCACAGAAAGGAACTAGGAGTCTACCTTTaGAAAAATGCTCACTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: CPVSMASKQVCEVVHRKELGVYL*KNAHFI Trigger: AATAAAGTGAGCATTTTTCCAAAGGTAGACTCCTAG...TTCCTTTCTGTGCACCACCTCACAGACTTGTTTGCTTGCCATAGAGACAGGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CAA 72 bp | GAGGTGCTAAATCAGGGTGGGTATTGCTTTAGCATTTaGCAATCATTATTTCTCCTTGCTCTGCTCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EVLNQGGYCFSI*QSLFLLALLTF Trigger: GAAGGTGAGCAGAGCAAGGAGAAATAATGATTGCAAAATGCTAAAGCAATACCCACCCTGATTTAGCACCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CAA 72 bp | CAGAAAGGAAGGTGCTCCCTCTTCAAGGAGAAGATTTaGAGGTTCACAAGACATAACACAACAGAAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QKGRCSLFKEKI*RFTRHNTTEGK Trigger: CTTTCCTTCTGTTGTGTTATGTCTTGTGAACCTCAAAATCTTCTCCTTGAAGAGGGAGCACCTTCCTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR GCA 90 bp | AACTATGACGTTTTACTTTGTGCCTATACGTCACTCAATATATCCCACTATACTGACACTGGCCACCACTaGATGAGCCCAGATGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: NYDVLLCAYTSLNISHYTDTGHH*MSPDVH Trigger: ATGTACATCTGGGCTCATGCAGTGGTGGCCAGTGTC...AGTATAGTGGGATATATTGAGTGACGTATAGGCACAAAGTAAAACGTCATAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR GCA 90 bp | TTGCCAACTATGACGTTTTACTTTGTGCCTATACGTCACTCAATATATCCCACTGAAGCAGCCTCTTCTTaGTATTTCGGGTCTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPTMTFYFVPIRHSIYPTEAASS*YFGSQR Trigger: TCTCTGAGACCCGAAATAGCAAGAAGAGGCTGCTTC...AGTGGGATATATTGAGTGACGTATAGGCACAAAGTAAAACGTCATAGTTGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| 3UTR CAA 72 bp | ACCTACATTTCTTCAGCACCTTTTAACTCCAAACATTaGCCAACTATGACGTTTTACTTTGTGCCTATACGT | + |
|
Preference number: 4 (lower is better) Translates to: TYISSAPFNSKH*PTMTFYFVPIR Trigger: ACGTATAGGCACAAAGTAAAACGTCATAGTTGGCAAATGTTTGGAGTTAAAAGGTGCTGAAGAAATGTAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS TCA 90 bp | ATGAAGATGACGACCTGCACGGTGGTGGTGAACTGGCGGTACAGCTaGGCCTCGCTCAGCTCCCCGAACGCGCTGAGGTTGGCGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: MKMTTCTVVVNWRYS*ASLSSPNALRLAPA Trigger: GGCTGGCGCCAACCTCAGCGCGTTCGGGGAGCTGAGCGAGGCTCAGCTGTACCGCCAGTTCACCACCACCGTGCAGGTCGTCATCTTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS GCA 90 bp | CACCCGAGGTTCAGAGTCCACTGTGCCTGGAGGTGGCACAGACGGTaGAAGCTGTGGTGGCTCCTGCTCGCCCTCTGGGCAGGAAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HPRFRVHCAWRWHRR*KLWWLLLALWAGSE Trigger: CTCACTTCCTGCCCAGAGGGCGAGCAGGAGCCACCACAGCTTGCACCGTCTGTGCCACCTCCAGGCACAGTGGACTCTGAACCTCGGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 90 bp | CATGGGAGCTACTGGGGACACCCGAGGTTCAGAGTCCACTGTGCCTaGAGGTGGCACAGACGGTGCAAGCTGTGGTGGCTCCTGCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HGSYWGHPRFRVHCA*RWHRRCKLWWLLLA Trigger: GGCGAGCAGGAGCCACCACAGCTTGCACCGTCTGTGCCACCTCCAGGCACAGTGGACTCTGAACCTCGGGTGTCCCCAGTAGCTCCCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS GCA 90 bp | ACTGTGCCTGGAGGTGGCACAGACGGTGCAAGCTGTGGTGGCTCCTaGTCGCCCTCTGGGCAGGAAGTGAGCACCTCCTTTGCCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TVPGGGTDGASCGGS*SPSGQEVSTSFAWK Trigger: TTTCCAGGCAAAGGAGGTGCTCACTTCCTGCCCAGAGGGCGAGCAGGAGCCACCACAGCTTGCACCGTCTGTGCCACCTCCAGGCACAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 90 bp | GCCACCCCACTCCCTGTACTAACCACATTGCGGCGACTGTACCGGTaGTGCAACTGCACCAGGGTCCCCACCAAGCACTTGCGTACCGAT | + |
|
Preference number: 5 (lower is better) Translates to: ATPLPVLTTLRRLYR*CNCTRVPTKHLRTD Trigger: ATCGGTACGCAAGTGCTTGGTGGGGACCCTGGTGCAGTTGCACCACCGGTACAGTCGCCGCAATGTGGTTAGTACAGGGAGTGGGGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS GCA 90 bp | ACCCCACTCCCTGTACTAACCACATTGCGGCGACTGTACCGGTGGTaGAACTGCACCAGGGTCCCCACCAAGCACTTGCGTACCGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: TPLPVLTTLRRLYRW*NCTRVPTKHLRTDL Trigger: CAAATCGGTACGCAAGTGCTTGGTGGGGACCCTGGTGCAGTTGCACCACCGGTACAGTCGCCGCAATGTGGTTAGTACAGGGAGTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 90 bp | CTGCTCATCTTCCGTTCCACCCTGTTCACTCTGGGCACCTTTGTCTaGATCAGCTCTTCTGGGGTATTGCCCAGTGGGGGAAGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLIFRSTLFTLGTFV*ISSSGVLPSGGSSL Trigger: GAGGCTGCTTCCCCCACTGGGCAATACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAGAGTGAACAGGGTGGAACGGAAGATGAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS TCA 90 bp | GCATCGTATAGATCCACCAGCAACAGTGAGGGCTGCTGCTCAGGATaGTGTCGAAGGGCACACAGACCACACTGGCACAAATCCCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASYRSTSNSEGCCSG*CRRAHRPHWHKSRS Trigger: GCTCCGGGATTTGTGCCAGTGTGGTCTGTGTGCCCTTCGACATCATCCTGAGCAGCAGCCCTCACTGTTGCTGGTGGATCTATACGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS GCA 90 bp | CTCCCTGTACTAACCACATTGCGGCGACTGTACCGGTGGTGCAACTaGACCAGGGTCCCCACCAAGCACTTGCGTACCGATTTGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LPVLTTLRRLYRWCN*TRVPTKHLRTDLFT Trigger: TGTGAACAAATCGGTACGCAAGTGCTTGGTGGGGACCCTGGTGCAGTTGCACCACCGGTACAGTCGCCGCAATGTGGTTAGTACAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 90 bp | TCTGGGCACCTTTGTCTGGATCAGCTCTTCTGGGGTATTGCCCAGTaGGGGAAGCAGCCTCTTCTTGCTATTTCGGGTCTCAGAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGHLCLDQLFWGIAQ*GKQPLLAISGLREP Trigger: TGGCTCTCTGAGACCCGAAATAGCAAGAAGAGGCTGCTTCCCCCACTGGGCAATACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS TCA 90 bp | GCGACATTGGTCACAGCAAACACAGGGACACTGGCCACCACTGCATaGGCCCAGATGTACATCACTAGCTCCCGAGACTTGGCATCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ATLVTANTGTLATTA*AQMYITSSRDLASD Trigger: ATCTGATGCCAAGTCTCGGGAGCTAGTGATGTACATCTGGGCTCATGCAGTGGTGGCCAGTGTCCCTGTGTTTGCTGTGACCAATGTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS GCA 90 bp | TGTTCACTCTGGGCACCTTTGTCTGGATCAGCTCTTCTGGGGTATTaGCCAGTGGGGGAAGCAGCCTCTTCTTGCTATTTCGGGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSLWAPLSGSALLGY*PVGEAASSCYFGSQ Trigger: CTGAGACCCGAAATAGCAAGAAGAGGCTGCTTCCCCCACTGGGCAATACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAGAGTGAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR CAA 90 bp | TGCCCTGTCTCTATGGCAAGCAAACAAGTCTGTGAGGTGGTGCACAGAAAGGAAAGCTCTTCTGGGGTATaGCCCAGTGGGGGAAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CPVSMASKQVCEVVHRKESSSGV*PSGGSS Trigger: GCTGCTTCCCCCACTGGGCAATACCCCAGAAGAGCT...TTCCTTTCTGTGCACCACCTCACAGACTTGTTTGCTTGCCATAGAGACAGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS GCA 90 bp | CTGGGAAGCATAGGGGATAGAGATGGTGTTCTGTGGGGTCCTCAGTaGAGCAATTATGACTTTCTTCTTCTGGCTGGCACTCAGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGSIGDRDGVLWGPQ*SNYDFLLLAGTQGP Trigger: AGGGCCCTGAGTGCCAGCCAGAAGAAGAAAGTCATAATTGCTGCACTGAGGACCCCACAGAACACCATCTCTATCCCCTATGCTTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS GCA 90 bp | GCCTCACTTTCTTCCTCATCCTCCGAGGGCTTAAAGATCTGTTGCTaGCCAATGTGGAACATCTCCAAGAGCTGGCTACCAGAGCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: ASLSSSSSEGLKICC*PMWNISKSWLPERM Trigger: CATGCGCTCTGGTAGCCAGCTCTTGGAGATGTTCCACATTGGGCAGCAACAGATCTTTAAGCCCTCGGAGGATGAGGAAGAAAGTGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS GCA 90 bp | TTGGCCTCACTTTCTTCCTCATCCTCCGAGGGCTTAAAGATCTGTTaGTGCCCAATGTGGAACATCTCCAAGAGCTGGCTACCAGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LASLSSSSSEGLKIC*CPMWNISKSWLPER Trigger: GCGCTCTGGTAGCCAGCTCTTGGAGATGTTCCACATTGGGCAGCAACAGATCTTTAAGCCCTCGGAGGATGAGGAAGAAAGTGAGGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 90 bp | CTCTGCCTCTCGCTGGGAAGCATAGGGGATAGAGATGGTGTTCTGTaGGGTCCTCAGTGCAGCAATTATGACTTTCTTCTTCTGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LCLSLGSIGDRDGVL*GPQCSNYDFLLLAG Trigger: GCCAGCCAGAAGAAGAAAGTCATAATTGCTGCACTGAGGACCCCACAGAACACCATCTCTATCCCCTATGCTTCCCAGCGAGAGGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR CAA 90 bp | GGACCACTGCCTTTGAGATGTAGAGGTTTGCCAGTAAGGAACACCCATCCATTCGCCAACAGAGAGACTTaGGGCAGCCAAATGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GPLPLRCRGLPVRNTHPFANRET*GSQMAV Trigger: CACGGCCATTTGGCTGCCCAAAGTCTCTCTGTTGGC...GAATGGATGGGTGTTCCTTACTGGCAAACCTCTACATCTCAAAGGCAGTGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR CAA 90 bp | CAAAGGACCCAGTGCATGTCACCTACATTTCTTCAGCACCTTTTAACTCCAAACAGGTGGCCCAAGGAGTaGCTCCAGACTTCCGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRTQCMSPTFLQHLLTPNRWPKE*LQTSVQ Trigger: CTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACCT...GTTTGGAGTTAAAAGGTGCTGAAGAAATGTAGGTGACATGCACTGGGTCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR CAA 90 bp | AAGAACACGTTCTCCCATCCACCATGGCTCAGACTGAACCTTCACTGGGAAGTATCACTCTGGGCACCTTaGTCTGGATCAGCTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KNTFSHPPWLRLNLHWEVSLWAP*SGSALL Trigger: CAGAAGAGCTGATCCAGACAAAGGTGCCCAGAGTGA...TACTTCCCAGTGAAGGTTCAGTCTGAGCCATGGTGGATGGGAGAACGTGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS CCA 90 bp | TCACTTTATTGTTTCTGCTCATCTTCCGTTCCACCCTGTTCACTCTaGGCACCTTTGTCTGGATCAGCTCTTCTGGGGTATTGCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLYCFCSSSVPPCSL*APLSGSALLGYCPV Trigger: CACTGGGCAATACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAGAGTGAACAGGGTGGAACGGAAGATGAGCAGAAACAATAAAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CAA 90 bp | CCTTGCTCTGCTCACCTTCTCTGGGGACCAGAATCATTGAACATATTGAAAATGCCTGTACTAACCACATaGCGGCGACTGTACCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PCSAHLLWGPESLNILKMPVLTT*RRLYRW Trigger: CCACCGGTACAGTCGCCGCAATGTGGTTAGTACAGG...CATTTTCAATATGTTCAATGATTCTGGTCCCCAGAGAAGGTGAGCAGAGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CAA 90 bp | AAGAACACGTTCTCCCATCCACCATGGCTCAGACTGAACCTTCACTGGGAAGTAGGGCTTAAAGATCTGTaGCTGCCCAATGTGGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: KNTFSHPPWLRLNLHWEVGLKDL*LPNVEH Trigger: ATGTTCCACATTGGGCAGCAACAGATCTTTAAGCCC...TACTTCCCAGTGAAGGTTCAGTCTGAGCCATGGTGGATGGGAGAACGTGTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CAA 90 bp | GAGGCCTTGGTGATACCAACAGGATGGAAAGATAATCAAGGACAAAAAGGCTCCAAGAAGAGCACAGGGTaGGCCAACAGAGAGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: EALVIPTGWKDNQGQKGSKKSTG*ANRETL Trigger: CAAAGTCTCTCTGTTGGCCAACCCTGTGCTCTTCTT...GGAGCCTTTTTGTCCTTGATTATCTTTCCATCCTGTTGGTATCACCAAGGCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGGACCCAGTGCATGTCACCTACATTTCTTCAGCACCTTTTAACTCCAAACGTCCCCACCAAGCACTaGCGTACCGATTTGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: QRTQCMSPTFLQHLLTPNVPTKH*RTDLFT Trigger: TGTGAACAAATCGGTACGCAAGTGCTTGGTGGGGAC...GTTTGGAGTTAAAAGGTGCTGAAGAAATGTAGGTGACATGCACTGGGTCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
||
| CDS-3UTR CAA 90 bp | ATCATTGAACATATTGAAAATGAGACTGTCAGGCGGGCCCATTCTATAGGTCAGGGAAGCAGCCTCTTCTaGCTATTTCGGGTCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: IIEHIENETVRRAHSIGQGSSLF*LFRVSE Trigger: CTCTGAGACCCGAAATAGCAAGAAGAGGCTGCTTCC...CTGACCTATAGAATGGGCCCGCCTGACAGTCTCATTTTCAATATGTTCAATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR CAA 90 bp | AGGAAGTTTACCTTAAAGGTGTCAAAGGACCCAGTGCATGTCACCTACATTTCTCTGTTGGTGACAGATTaGAACACTGTTGTGCGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RKFTLKVSKDPVHVTYISLLVTD*NTVVRQ Trigger: TTGCCGCACAACAGTGTTCAAATCTGTCACCAACAG...AGAAATGTAGGTGACATGCACTGGGTCCTTTGACACCTTTAAGGTAAACTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR CAA 90 bp | AGGAAGTTTACCTTAAAGGTGTCAAAGGACCCAGTGCATGTCACCTACATTTCTCACTTGCGTACCGATTaGTTCACAGTTAAGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RKFTLKVSKDPVHVTYISHLRTD*FTVKKS Trigger: GCTCTTCTTAACTGTGAACAAATCGGTACGCAAGTG...AGAAATGTAGGTGACATGCACTGGGTCCTTTGACACCTTTAAGGTAAACTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS-3UTR CAA 90 bp | TTGCCAACTATGACGTTTTACTTTGTGCCTATACGTCACTCAATATATCCCACTACTAGCTCCCGAGACTaGGCATCAGATATTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPTMTFYFVPIRHSIYPTTSSRD*ASDIFL Trigger: GAGAAAAATATCTGATGCCAAGTCTCGGGAGCTAGT...AGTGGGATATATTGAGTGACGTATAGGCACAAAGTAAAACGTCATAGTTGGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS TCA 72 bp | GGTACAGCTGAGCCTCGCTCAGCTCCCCGAACGCGCTaGGGTTGGCGCCAGCCTCGGCGCCCGACGTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GTAEPRSAPRTR*GWRQPRRPTCC Trigger: GCAACACGTCGGGCGCCGAGGCTGGCGCCAACCTCAGCGCGTTCGGGGAGCTGAGCGAGGCTCAGCTGTACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 72 bp | CGCCAGCCTCGGCGCCCGACGTGTTGCGCGGGTGGCTaGTGTTCGGTGACACCCAGCTGCTGTTGTGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RQPRRPTCCAGG*CSVTPSCCCAP Trigger: TGGGGCACAACAGCAGCTGGGTGTCACCGAACACCAGCCACCCGCGCAACACGTCGGGCGCCGAGGCTGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 72 bp | TTGGCGCCAGCCTCGGCGCCCGACGTGTTGCGCGGGTaGCTGGTGTTCGGTGACACCCAGCTGCTGTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LAPASAPDVLRG*LVFGDTQLLLC Trigger: GCACAACAGCAGCTGGGTGTCACCGAACACCAGCCACCCGCGCAACACGTCGGGCGCCGAGGCTGGCGCCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS TCA 72 bp | ACGACCTGCACGGTGGTGGTGAACTGGCGGTACAGCTaGGCCTCGCTCAGCTCCCCGAACGCGCTGAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TTCTVVVNWRYS*ASLSSPNALRL Trigger: CAACCTCAGCGCGTTCGGGGAGCTGAGCGAGGCTCAGCTGTACCGCCAGTTCACCACCACCGTGCAGGTCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 90 bp | GGCTCAAGGCTGGGCTCAGCCACCCCACTCCCTGTACTAACCACATaGCGGCGACTGTACCGGTGGTGCAACTGCACCAGGGTCCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GSRLGSATPLPVLTT*RRLYRWCNCTRVPT Trigger: GGTGGGGACCCTGGTGCAGTTGCACCACCGGTACAGTCGCCGCAATGTGGTTAGTACAGGGAGTGGGGTGGCTGAGCCCAGCCTTGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS TCA 72 bp | GCTGTGGTGGCTCCTGCTCGCCCTCTGGGCAGGAAGTaGGCACCTCCTTTGCCTGGAAATCGGCTGAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: AVVAPARPLGRK*APPLPGNRLSR Trigger: TCGGCTCAGCCGATTTCCAGGCAAAGGAGGTGCTCACTTCCTGCCCAGAGGGCGAGCAGGAGCCACCACAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 72 bp | AGACGGTGCAAGCTGTGGTGGCTCCTGCTCGCCCTCTaGGCAGGAAGTGAGCACCTCCTTTGCCTGGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: RRCKLWWLLLAL*AGSEHLLCLEI Trigger: GATTTCCAGGCAAAGGAGGTGCTCACTTCCTGCCCAGAGGGCGAGCAGGAGCCACCACAGCTTGCACCGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS GCA 72 bp | CTAACCACATTGCGGCGACTGTACCGGTGGTGCAACTaGACCAGGGTCCCCACCAAGCACTTGCGTACCGAT | + |
|
Preference number: 6 (lower is better) Translates to: LTTLRRLYRWCN*TRVPTKHLRTD Trigger: ATCGGTACGCAAGTGCTTGGTGGGGACCCTGGTGCAGTTGCACCACCGGTACAGTCGCCGCAATGTGGTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS GCA 72 bp | CCTGTACTAACCACATTGCGGCGACTGTACCGGTGGTaGAACTGCACCAGGGTCCCCACCAAGCACTTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: PVLTTLRRLYRW*NCTRVPTKHLR Trigger: ACGCAAGTGCTTGGTGGGGACCCTGGTGCAGTTGCACCACCGGTACAGTCGCCGCAATGTGGTTAGTACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 72 bp | CTCCCTGTACTAACCACATTGCGGCGACTGTACCGGTaGTGCAACTGCACCAGGGTCCCCACCAAGCACTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPVLTTLRRLYR*CNCTRVPTKHL Trigger: CAAGTGCTTGGTGGGGACCCTGGTGCAGTTGCACCACCGGTACAGTCGCCGCAATGTGGTTAGTACAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 72 bp | ATCTGTTGCTGCCCAATGTGGAACATCTCCAAGAGCTaGCTACCAGAGCGCATGCTGGGCTCAAGGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ICCCPMWNISKS*LPERMLGSRLG Trigger: GCCCAGCCTTGAGCCCAGCATGCGCTCTGGTAGCCAGCTCTTGGAGATGTTCCACATTGGGCAGCAACAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 72 bp | TCGCCCTCTGGGCAGGAAGTGAGCACCTCCTTTGCCTaGAAATCGGCTGAGCCGAGATACTTGGCCTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: SPSGQEVSTSFA*KSAEPRYLASL Trigger: AAGTGAGGCCAAGTATCTCGGCTCAGCCGATTTCCAGGCAAAGGAGGTGCTCACTTCCTGCCCAGAGGGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 72 bp | TTCCGTTCCACCCTGTTCACTCTGGGCACCTTTGTCTaGATCAGCTCTTCTGGGGTATTGCCCAGTGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FRSTLFTLGTFV*ISSSGVLPSGG Trigger: TCCCCCACTGGGCAATACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAGAGTGAACAGGGTGGAACGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS TCA 72 bp | AGATCCACCAGCAACAGTGAGGGCTGCTGCTCAGGATaGTGTCGAAGGGCACACAGACCACACTGGCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: RSTSNSEGCCSG*CRRAHRPHWHK Trigger: TTTGTGCCAGTGTGGTCTGTGTGCCCTTCGACATCATCCTGAGCAGCAGCCCTCACTGTTGCTGGTGGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 72 bp | GTTCACTCTGGGCACCTTTGTCTGGATCAGCTCTTCTaGGGTATTGCCCAGTGGGGGAAGCAGCCTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VHSGHLCLDQLF*GIAQWGKQPLL Trigger: AAGAAGAGGCTGCTTCCCCCACTGGGCAATACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAGAGTGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 90 bp | TGTTTCTGCTCATCTTCCGTTCCACCCTGTTCACTCTGGGCACCTTaGTCTGGATCAGCTCTTCTGGGGTATTGCCCAGTGGGGGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CFCSSSVPPCSLWAP*SGSALLGYCPVGEA Trigger: TGCTTCCCCCACTGGGCAATACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAGAGTGAACAGGGTGGAACGGAAGATGAGCAGAAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS TCA 72 bp | GCAGGAAGTGAGCACCTCCTTTGCCTGGAAATCGGCTaGGCCGAGATACTTGGCCTCACTTTCTTCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: AGSEHLLCLEIG*AEILGLTFFLI Trigger: GATGAGGAAGAAAGTGAGGCCAAGTATCTCGGCTCAGCCGATTTCCAGGCAAAGGAGGTGCTCACTTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS GCA 72 bp | TGGGCACCTTTGTCTGGATCAGCTCTTCTGGGGTATTaGCCAGTGGGGGAAGCAGCCTCTTCTTGCTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: WAPLSGSALLGY*PVGEAASSCYF Trigger: GAAATAGCAAGAAGAGGCTGCTTCCCCCACTGGGCAATACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 72 bp | CTTTGTCTGGATCAGCTCTTCTGGGGTATTGCCCAGTaGGGGAAGCAGCCTCTTCTTGCTATTTCGGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LCLDQLFWGIAQ*GKQPLLAISGL Trigger: GAGACCCGAAATAGCAAGAAGAGGCTGCTTCCCCCACTGGGCAATACCCCAGAAGAGCTGATCCAGACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 72 bp | TGCACCAGGGTCCCCACCAAGCACTTGCGTACCGATTaGTTCACAGTTAAGAAGAGCACAGGGTTGGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: CTRVPTKHLRTD*FTVKKSTGLAN Trigger: GTTGGCCAACCCTGTGCTCTTCTTAACTGTGAACAAATCGGTACGCAAGTGCTTGGTGGGGACCCTGGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 72 bp | ACCTCCTTTGCCTGGAAATCGGCTGAGCCGAGATACTaGGCCTCACTTTCTTCCTCATCCTCCGAGGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: TSFAWKSAEPRY*ASLSSSSSEGL Trigger: TAAGCCCTCGGAGGATGAGGAAGAAAGTGAGGCCAAGTATCTCGGCTCAGCCGATTTCCAGGCAAAGGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 72 bp | CTGGGCACCTTTGTCTGGATCAGCTCTTCTGGGGTATaGCCCAGTGGGGGAAGCAGCCTCTTCTTGCTATTT | + |
|
Preference number: 6 (lower is better) Translates to: LGTFVWISSSGV*PSGGSSLFLLF Trigger: AAATAGCAAGAAGAGGCTGCTTCCCCCACTGGGCAATACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 90 bp | TGGTGCAACTGCACCAGGGTCCCCACCAAGCACTTGCGTACCGATTaGTTCACAGTTAAGAAGAGCACAGGGTTGGCCAACAGAGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: WCNCTRVPTKHLRTD*FTVKKSTGLANRET Trigger: AGTCTCTCTGTTGGCCAACCCTGTGCTCTTCTTAACTGTGAACAAATCGGTACGCAAGTGCTTGGTGGGGACCCTGGTGCAGTTGCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 90 bp | CTTGGCCTCACTTTCTTCCTCATCCTCCGAGGGCTTAAAGATCTGTaGCTGCCCAATGTGGAACATCTCCAAGAGCTGGCTACCAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: LGLTFFLILRGLKDL*LPNVEHLQELATRA Trigger: CGCTCTGGTAGCCAGCTCTTGGAGATGTTCCACATTGGGCAGCAACAGATCTTTAAGCCCTCGGAGGATGAGGAAGAAAGTGAGGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 72 bp | TGTCAGCGACATTGGTCACAGCAAACACAGGGACACTaGCCACCACTGCATGAGCCCAGATGTACATCACTA | + |
|
Preference number: 6 (lower is better) Translates to: CQRHWSQQTQGH*PPLHEPRCTSL Trigger: TAGTGATGTACATCTGGGCTCATGCAGTGGTGGCCAGTGTCCCTGTGTTTGCTGTGACCAATGTCGCTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 90 bp | GAAGTGAGCACCTCCTTTGCCTGGAAATCGGCTGAGCCGAGATACTaGGCCTCACTTTCTTCCTCATCCTCCGAGGGCTTAAAGATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: EVSTSFAWKSAEPRY*ASLSSSSSEGLKIC Trigger: ACAGATCTTTAAGCCCTCGGAGGATGAGGAAGAAAGTGAGGCCAAGTATCTCGGCTCAGCCGATTTCCAGGCAAAGGAGGTGCTCACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 90 bp | AAGCACTTGCGTACCGATTTGTTCACAGTTAAGAAGAGCACAGGGTaGGCCAACAGAGAGACTTTGGGCAGCCAAATGGCCGTGAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: KHLRTDLFTVKKSTG*ANRETLGSQMAVRS Trigger: GCTTCTCACGGCCATTTGGCTGCCCAAAGTCTCTCTGTTGGCCAACCCTGTGCTCTTCTTAACTGTGAACAAATCGGTACGCAAGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS GCA 72 bp | TCTTCCTCATCCTCCGAGGGCTTAAAGATCTGTTGCTaGCCAATGTGGAACATCTCCAAGAGCTGGCTACCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSEGLKICC*PMWNISKSWLP Trigger: TGGTAGCCAGCTCTTGGAGATGTTCCACATTGGGCAGCAACAGATCTTTAAGCCCTCGGAGGATGAGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 72 bp | GTACCGATTTGTTCACAGTTAAGAAGAGCACAGGGTTaGCCAACAGAGAGACTTTGGGCAGCCAAATGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VPICSQLRRAQG*PTERLWAAKWP Trigger: CGGCCATTTGGCTGCCCAAAGTCTCTCTGTTGGCCAACCCTGTGCTCTTCTTAACTGTGAACAAATCGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 72 bp | TGTTTCTGCTCATCTTCCGTTCCACCCTGTTCACTCTaGGCACCTTTGTCTGGATCAGCTCTTCTGGGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: CFCSSSVPPCSL*APLSGSALLGY Trigger: ATACCCCAGAAGAGCTGATCCAGACAAAGGTGCCCAGAGTGAACAGGGTGGAACGGAAGATGAGCAGAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 72 bp | GTTAAGAAGAGCACAGGGTTGGCCAACAGAGAGACTTaGGGCAGCCAAATGGCCGTGAGAAGCAAGAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: VKKSTGLANRET*GSQMAVRSKKT Trigger: TGTCTTCTTGCTTCTCACGGCCATTTGGCTGCCCAAAGTCTCTCTGTTGGCCAACCCTGTGCTCTTCTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 72 bp | CGTACCGATTTGTTCACAGTTAAGAAGAGCACAGGGTaGGCCAACAGAGAGACTTTGGGCAGCCAAATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RTDLFTVKKSTG*ANRETLGSQMA Trigger: GGCCATTTGGCTGCCCAAAGTCTCTCTGTTGGCCAACCCTGTGCTCTTCTTAACTGTGAACAAATCGGTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS GCA 72 bp | CTTTCTTCCTCATCCTCCGAGGGCTTAAAGATCTGTTaGTGCCCAATGTGGAACATCTCCAAGAGCTGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: LSSSSSEGLKIC*CPMWNISKSWL Trigger: TAGCCAGCTCTTGGAGATGTTCCACATTGGGCAGCAACAGATCTTTAAGCCCTCGGAGGATGAGGAAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 72 bp | ACTTTCTTCCTCATCCTCCGAGGGCTTAAAGATCTGTaGCTGCCCAATGTGGAACATCTCCAAGAGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TFFLILRGLKDL*LPNVEHLQELA Trigger: AGCCAGCTCTTGGAGATGTTCCACATTGGGCAGCAACAGATCTTTAAGCCCTCGGAGGATGAGGAAGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 90 bp | TTGTTCACAGTTAAGAAGAGCACAGGGTTGGCCAACAGAGAGACTTaGGGCAGCCAAATGGCCGTGAGAAGCAAGAAGACAGAGGTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LFTVKKSTGLANRET*GSQMAVRSKKTEVL Trigger: TAACACCTCTGTCTTCTTGCTTCTCACGGCCATTTGGCTGCCCAAAGTCTCTCTGTTGGCCAACCCTGTGCTCTTCTTAACTGTGAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS TCA 72 bp | GGACAGTCACAGAGCAGAACACCTTGTGTAGGAATTTaGGCACCTTGCAGAAGAGCATCGTATAGATCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GQSQSRTPCVGI*APCRRASYRST Trigger: GGTGGATCTATACGATGCTCTTCTGCAAGGTGCTCAAATTCCTACACAAGGTGTTCTGCTCTGTGACTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CCA 72 bp | TCGCTGGGAAGCATAGGGGATAGAGATGGTGTTCTGTaGGGTCCTCAGTGCAGCAATTATGACTTTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLGSIGDRDGVL*GPQCSNYDFLL Trigger: AAGAAGAAAGTCATAATTGCTGCACTGAGGACCCCACAGAACACCATCTCTATCCCCTATGCTTCCCAGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 90 bp | ACACTGGCACAAATCCCGGAGCAGGCCAGGTTTTTAATGAACCTGTaGGTGACAGATTTGAACACTGTTGTGCGGCAAGTTGACCATAAC | + |
|
Preference number: 6 (lower is better) Translates to: TLAQIPEQARFLMNL*VTDLNTVVRQVDHN Trigger: GTTATGGTCAACTTGCCGCACAACAGTGTTCAAATCTGTCACCAACAGGTTCATTAAAAACCTGGCCTGCTCCGGGATTTGTGCCAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 72 bp | CAAATCCCGGAGCAGGCCAGGTTTTTAATGAACCTGTaGGTGACAGATTTGAACACTGTTGTGCGGCAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: QIPEQARFLMNL*VTDLNTVVRQV Trigger: AACTTGCCGCACAACAGTGTTCAAATCTGTCACCAACAGGTTCATTAAAAACCTGGCCTGCTCCGGGATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 90 bp | ATCCCGGAGCAGGCCAGGTTTTTAATGAACCTGTTGGTGACAGATTaGAACACTGTTGTGCGGCAAGTTGACCATAACACCATGAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: IPEQARFLMNLLVTD*NTVVRQVDHNTMKF Trigger: AAACTTCATGGTGTTATGGTCAACTTGCCGCACAACAGTGTTCAAATCTGTCACCAACAGGTTCATTAAAAACCTGGCCTGCTCCGGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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| CDS CAA 72 bp | CAGGCCAGGTTTTTAATGAACCTGTTGGTGACAGATTaGAACACTGTTGTGCGGCAAGTTGACCATAACACC | + |
|
Preference number: 6 (lower is better) Translates to: QARFLMNLLVTD*NTVVRQVDHNT Trigger: GGTGTTATGGTCAACTTGCCGCACAACAGTGTTCAAATCTGTCACCAACAGGTTCATTAAAAACCTGGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039160.3 |
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