Pregenerated sensors for GPR174 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073008

Ensembl transcript IDs: ENSMUST00000101294.9, ENSMUST00000117310.8, ENSMUST00000118820.8, ENSMUST00000120971.8, ENSMUST00000178838.2

Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	AAAATGATAAATAAGAGATCTGAGGAAAAGACTTTCCAAGAAGAGTaGAACCTCAGTAAAGAGGCGCCTGCTTGGTGGCCGAAGCACTAT	+
Preference number: 1 (lower is better) Translates to: KMINKRSEEKTFQEE*NLSKEAPAWWPKHY Trigger: ATAGTGCTTCGGCCACCAAGCAGGCGCCTCTTTACTGAGGTTCCACTCTTCTTGGAAAGTCTTTTCCTCAGATCTCTTATTTATCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118820.8 ENSMUST00000178838.2
3UTR CCA 90 bp	TCACTTTGGTTCATATTTTCACTCTGCCCAAGCTTAGCGACTAATTaGTGCACTGTTTCTTCCATAGGCTCAGTAAATGCAGTAATAACC	+
Preference number: 1 (lower is better) Translates to: SLWFIFSLCPSLATN*CTVSSIGSVNAVIT Trigger: GGTTATTACTGCATTTACTGAGCCTATGGAAGAAACAGTGCACCAATTAGTCGCTAAGCTTGGGCAGAGTGAAAATATGAACCAAAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR TCA 90 bp	AGGATGTATATGGCTGCTGGAATGATCCACACTTTTCTCAAAAGGTaGAAGAATTGCTTCCAACAGTTTCTGAGAGGTAATCTTTGTAGG	+
Preference number: 1 (lower is better) Translates to: RMYMAAGMIHTFLKR*KNCFQQFLRGNLCR Trigger: CCTACAAAGATTACCTCTCAGAAACTGTTGGAAGCAATTCTTTCACCTTTTGAGAAAAGTGTGGATCATTCCAGCAGCCATATACATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR CCA 90 bp	AACCAAATATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATaGACAATTGCACACCTTTTGAACATAGATTCAGCAACTGTGGTA	+
Preference number: 1 (lower is better) Translates to: NQICCWNANCDHYYK*TIAHLLNIDSATVV Trigger: TACCACAGTTGCTGAATCTATGTTCAAAAGGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATATTTGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR CCA 90 bp	TGTGACTTAGGTTCACAGATAAAGCTGATGACTCTAGCTGAGAGAATATGTGCGACTGCAAATGTGTTCTaGTATTTGCATTCCAGGCCA	+
Preference number: 2 (lower is better) Translates to: CDLGSQIKLMTLAERICATANVF*YLHSRP Trigger: TGGCCTGGAATGCAAATACCAGAACACATTTGCAGT...CGCACATATTCTCTCAGCTAGAGTCATCAGCTTTATCTGTGAACCTAAGTCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR CCA 90 bp	GTTGGTCCAACATTACCGCATGGACATGTCACCAGCAATGATATTGAAATGCAAACTGCAAATGTGTTCTaGTATTTGCATTCCAGGCCA	+
Preference number: 2 (lower is better) Translates to: VGPTLPHGHVTSNDIEMQTANVF*YLHSRP Trigger: TGGCCTGGAATGCAAATACCAGAACACATTTGCAGT...TTGCATTTCAATATCATTGCTGGTGACATGTCCATGCGGTAATGTTGGACCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR TCA 90 bp	GGCTTGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGAGGAGTTTCAAATCCTTaGATGGAATCACACTTGGGA	+
Preference number: 2 (lower is better) Translates to: GLCRCLNRHHLPWRILKGGVSNP*MESHLG Trigger: TCCCAAGTGTGATTCCATTCAAGGATTTGAAACTCC...TCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	ACCTCTTTCCTTTCTCTAAAGCATAAAGGCCATCTGACTCATGTTGCCTTAACTATGTGTTCTGGTATTTaGATTCCAGGCCATGTTCAG	+
Preference number: 2 (lower is better) Translates to: TSFLSLKHKGHLTHVALTMCSGI*IPGHVQ Trigger: CTGAACATGGCCTGGAATGCAAATACCAGAACACAT...AGTTAAGGCAACATGAGTCAGATGGCCTTTATGCTTTAGAGAAAGGAAAGAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	GGCTTGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGATTAGCGACTAATTGGTaGACTGTTTCTTCCATAGGC	+
Preference number: 2 (lower is better) Translates to: GLCRCLNRHHLPWRILKGLATNW*TVSSIG Trigger: GCCTATGGAAGAAACAGTGCACCAATTAGTCGCTAA...TCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	TATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGCACACCATGTGTTCTGGTATTTaGATTCCAGGCCATGTTCAG	+
Preference number: 2 (lower is better) Translates to: YVVGMQTVITTTNGQLHTMCSGI*IPGHVQ Trigger: CTGAACATGGCCTGGAATGCAAATACCAGAACACAT...GGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	AAGACTTATACTTCACTTTGGTTCATATTTTCACTCTGCCCAAGCTTAGCGACTATGTGTTCTGGTATTTaGATTCCAGGCCATGTTCAG	+
Preference number: 2 (lower is better) Translates to: KTYTSLWFIFSLCPSLATMCSGI*IPGHVQ Trigger: CTGAACATGGCCTGGAATGCAAATACCAGAACACAT...AGTCGCTAAGCTTGGGCAGAGTGAAAATATGAACCAAAGTGAAGTATAAGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	AACTGGAAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACATGTGTTCTGGTATTTaGATTCCAGGCCATGTTCAG	+
Preference number: 2 (lower is better) Translates to: NWKSADLKVHMTSVFMSHMCSGI*IPGHVQ Trigger: CTGAACATGGCCTGGAATGCAAATACCAGAACACAT...GTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTTCCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	GACCTAGTTTCAGAGAGCCAGAATTGTGGTTGTCACCTCTTTCCTTTCTCTAAAGTCTTGATGAGGTACTaGAAATGTGTTCTGGTATTT	+
Preference number: 2 (lower is better) Translates to: DLVSESQNCGCHLFPFSKVLMRY*KCVLVF Trigger: AAATACCAGAACACATTTGCAGTACCTCATCAAGAC...TTTAGAGAAAGGAAAGAGGTGACAACCACAATTCTGGCTCTCTGAAACTAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR CCA 90 bp	AAGACTTATACTTCACTTTGGTTCATATTTTCACTCTGCCCAAGCTTAGCGACTACTGCAAATGTGTTCTaGTATTTGCATTCCAGGCCA	+
Preference number: 2 (lower is better) Translates to: KTYTSLWFIFSLCPSLATTANVF*YLHSRP Trigger: TGGCCTGGAATGCAAATACCAGAACACATTTGCAGT...AGTCGCTAAGCTTGGGCAGAGTGAAAATATGAACCAAAGTGAAGTATAAGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR TCA 90 bp	AAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACTCTGGCCACACTGAAAGGTTATaGATACTTCCTGTGAATACT	+
Preference number: 2 (lower is better) Translates to: KSADLKVHMTSVFMSHSGHTERL*ILPVNT Trigger: AGTATTCACAGGAAGTATTCATAACCTTTCAGTGTG...GCCAGAGTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	GCTATCCCTCTCCTAGGCATGTTCATACATATATACCTGAAGGTATTCTTTGGACCATCTGACTCATGTTaGCTTAACTGTAGAAAACTA	+
Preference number: 2 (lower is better) Translates to: AIPLLGMFIHIYLKVFFGPSDSC*LNCRKL Trigger: TAGTTTTCTACAGTTAAGGCAACATGAGTCAGATGG...TCCAAAGAATACCTTCAGGTATATATGTATGAACATGCCTAGGAGAGGGATAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	TTACAATGTATATCATGCTTCAGAATATTCCAGTGCTTACAACCACATACCCGATTAGCGACTAATTGGTaGACTGTTTCTTCCATAGGC	+
Preference number: 2 (lower is better) Translates to: LQCISCFRIFQCLQPHTRLATNW*TVSSIG Trigger: GCCTATGGAAGAAACAGTGCACCAATTAGTCGCTAA...TCGGGTATGTGGTTGTAAGCACTGGAATATTCTGAAGCATGATATACATTGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR TCA 90 bp	TGCACTGTTTCTTCCATAGGCTCAGTAAATGCAGTAATAACCTATCAGATTGCTCACACTGAAAGGTTATaGATACTTCCTGTGAATACT	+
Preference number: 2 (lower is better) Translates to: CTVSSIGSVNAVITYQIAHTERL*ILPVNT Trigger: AGTATTCACAGGAAGTATTCATAACCTTTCAGTGTG...AGCAATCTGATAGGTTATTACTGCATTTACTGAGCCTATGGAAGAAACAGTGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR TCA 90 bp	TATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGCACACCCACACTGAAAGGTTATaGATACTTCCTGTGAATACT	+
Preference number: 2 (lower is better) Translates to: YVVGMQTVITTTNGQLHTHTERL*ILPVNT Trigger: AGTATTCACAGGAAGTATTCATAACCTTTCAGTGTG...GGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	GCGCAGTATTATCAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAACATTATGTGTTCTGGTATTTaGATTCCAGGCCATGTTCAG	+
Preference number: 2 (lower is better) Translates to: AQYYQNFTIYVLKSWSNIMCSGI*IPGHVQ Trigger: CTGAACATGGCCTGGAATGCAAATACCAGAACACAT...AATGTTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTGATAATACTGCGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	GGCTTGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGACTACAAATGGACAATTaGACACCTTTTGAACATAGA	+
Preference number: 2 (lower is better) Translates to: GLCRCLNRHHLPWRILKGLQMDN*TPFEHR Trigger: TCTATGTTCAAAAGGTGTGCAATTGTCCATTTGTAG...TCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACAAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	AACTGGAAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACCCATCTGACTCATGTTaGCTTAACTGTAGAAAACTA	+
Preference number: 2 (lower is better) Translates to: NWKSADLKVHMTSVFMSHPSDSC*LNCRKL Trigger: TAGTTTTCTACAGTTAAGGCAACATGAGTCAGATGG...GTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTTCCAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR CCA 90 bp	TGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGATAATACTGCAAATGTGTTCTaGTATTTGCATTCCAGGCCA	+
Preference number: 2 (lower is better) Translates to: CVDVLIGTTYLGEYLKDNTANVF*YLHSRP Trigger: TGGCCTGGAATGCAAATACCAGAACACATTTGCAGT...ATTATCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR CCA 90 bp	GGCTTGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGAAACCAAATATGTTGTTaGAATGCAAACTGTGATCAC	+
Preference number: 2 (lower is better) Translates to: GLCRCLNRHHLPWRILKGNQICC*NANCDH Trigger: GTGATCACAGTTTGCATTCCAACAACATATTTGGTT...TCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACAAGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR CAA 90 bp	GAGTTGGTCCAACATTACCGCATGGACATGTCACCAGCAATGATATaGAAATGCAATATTCTAAACAGGTATTGTCATAAATATGTGCAT	+
Preference number: 2 (lower is better) Translates to: ELVQHYRMDMSPAMI*KCNILNRYCHKYVH Trigger: ATGCACATATTTATGACAATACCTGTTTAGAATATTGCATTTCAATATCATTGCTGGTGACATGTCCATGCGGTAATGTTGGACCAACTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	TTACAATGTATATCATGCTTCAGAATATTCCAGTGCTTACAACCACATACCCGAGTCTTGATGAGGTACTaGAAATGTGTTCTGGTATTT	+
Preference number: 2 (lower is better) Translates to: LQCISCFRIFQCLQPHTRVLMRY*KCVLVF Trigger: AAATACCAGAACACATTTGCAGTACCTCATCAAGAC...TCGGGTATGTGGTTGTAAGCACTGGAATATTCTGAAGCATGATATACATTGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	AACTGGAAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACCTACAAATGGACAATTaGACACCTTTTGAACATAGA	+
Preference number: 2 (lower is better) Translates to: NWKSADLKVHMTSVFMSHLQMDN*TPFEHR Trigger: TCTATGTTCAAAAGGTGTGCAATTGTCCATTTGTAG...GTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTTCCAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	TGCACTGTTTCTTCCATAGGCTCAGTAAATGCAGTAATAACCTATCAGATTGCTCTACAAATGGACAATTaGACACCTTTTGAACATAGA	+
Preference number: 2 (lower is better) Translates to: CTVSSIGSVNAVITYQIALQMDN*TPFEHR Trigger: TCTATGTTCAAAAGGTGTGCAATTGTCCATTTGTAG...AGCAATCTGATAGGTTATTACTGCATTTACTGAGCCTATGGAAGAAACAGTGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	AAGACTTATACTTCACTTTGGTTCATATTTTCACTCTGCCCAAGCTTAGCGACTCTACAAATGGACAATTaGACACCTTTTGAACATAGA	+
Preference number: 2 (lower is better) Translates to: KTYTSLWFIFSLCPSLATLQMDN*TPFEHR Trigger: TCTATGTTCAAAAGGTGTGCAATTGTCCATTTGTAG...AGTCGCTAAGCTTGGGCAGAGTGAAAATATGAACCAAAGTGAAGTATAAGTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR CCA 90 bp	TTACAATGTATATCATGCTTCAGAATATTCCAGTGCTTACAACCACATACCCGAGAATGGAATCACACTTaGGAAATAACAATTACCCTG	+
Preference number: 2 (lower is better) Translates to: LQCISCFRIFQCLQPHTREWNHT*EITITL Trigger: CAGGGTAATTGTTATTTCCCAAGTGTGATTCCATTC...TCGGGTATGTGGTTGTAAGCACTGGAATATTCTGAAGCATGATATACATTGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR TCA 90 bp	ACCAAATATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGCACACTGAAAGGTTATaGATACTTCCTGTGAATACT	+
Preference number: 2 (lower is better) Translates to: TKYVVGMQTVITTTNGQLHTERL*ILPVNT Trigger: AGTATTCACAGGAAGTATTCATAACCTTTCAGTGTG...CAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATATTTGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	ATGTGCGCAGTATTATCAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAAGTCTTGATGAGGTACTaGAAATGTGTTCTGGTATTT	+
Preference number: 2 (lower is better) Translates to: MCAVLSKFHHLRLKELVQVLMRY*KCVLVF Trigger: AAATACCAGAACACATTTGCAGTACCTCATCAAGAC...TTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTGATAATACTGCGCACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	ACCAAATATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGGTCTTGATGAGGTACTaGAAATGTGTTCTGGTATTT	+
Preference number: 2 (lower is better) Translates to: TKYVVGMQTVITTTNGQLVLMRY*KCVLVF Trigger: AAATACCAGAACACATTTGCAGTACCTCATCAAGAC...CAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATATTTGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	TTACAATGTATATCATGCTTCAGAATATTCCAGTGCTTACAACCACATACCCGACTACAAATGGACAATTaGACACCTTTTGAACATAGA	+
Preference number: 2 (lower is better) Translates to: LQCISCFRIFQCLQPHTRLQMDN*TPFEHR Trigger: TCTATGTTCAAAAGGTGTGCAATTGTCCATTTGTAG...TCGGGTATGTGGTTGTAAGCACTGGAATATTCTGAAGCATGATATACATTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	TGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGATAATCCATCTGACTCATGTTaGCTTAACTGTAGAAAACTA	+
Preference number: 2 (lower is better) Translates to: CVDVLIGTTYLGEYLKDNPSDSC*LNCRKL Trigger: TAGTTTTCTACAGTTAAGGCAACATGAGTCAGATGG...ATTATCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	TTACAATGTATATCATGCTTCAGAATATTCCAGTGCTTACAACCACATACCCGACATAGGCTCAGTAAATaGAGTAATAACCTATCAGAT	+
Preference number: 2 (lower is better) Translates to: LQCISCFRIFQCLQPHTRHRLSK*SNNLSD Trigger: ATCTGATAGGTTATTACTGCATTTACTGAGCCTATG...TCGGGTATGTGGTTGTAAGCACTGGAATATTCTGAAGCATGATATACATTGTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR GCA 90 bp	TGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGATAATCATAGGCTCAGTAAATaGAGTAATAACCTATCAGAT	+
Preference number: 2 (lower is better) Translates to: CVDVLIGTTYLGEYLKDNHRLSK*SNNLSD Trigger: ATCTGATAGGTTATTACTGCATTTACTGAGCCTATG...ATTATCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR CCA 72 bp	AATAAGAGATCTGAGGAAAAGACTTTCCAAGAAGAGTaGAACCTCAGTAAAGAGGCGCCTGCTTGGTGGCCG	+
Preference number: 3 (lower is better) Translates to: NKRSEEKTFQEE*NLSKEAPAWWP Trigger: CGGCCACCAAGCAGGCGCCTCTTTACTGAGGTTCCACTCTTCTTGGAAAGTCTTTTCCTCAGATCTCTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118820.8 ENSMUST00000178838.2
3UTR TCA 72 bp	TATAGTGTCTTCCCCTCTACCACATCTCCCTGTGTCTaGAATTGCTCCATTTGGATTTCTGTACTTCGTGTT	+
Preference number: 3 (lower is better) Translates to: YSVFPSTTSPCV*NCSIWISVLRV Trigger: AACACGAAGTACAGAAATCCAAATGGAGCAATTTCAGACACAGGGAGATGTGGTAGAGGGGAAGACACTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101294.9 ENSMUST00000118820.8 ENSMUST00000178838.2
3UTR-3UTR CAA 90 bp	AAGACTTATACTTCACTTTGGTTCATATTTTCACTCTGCCCAAGCTTAGCGACTTTCAGAGAGCCAGAATaGTGGTTGTCACCTCTTTCC	+
Preference number: 3 (lower is better) Translates to: KTYTSLWFIFSLCPSLATFREPE*WLSPLS Trigger: GGAAAGAGGTGACAACCACAATTCTGGCTCTCTGAA...AGTCGCTAAGCTTGGGCAGAGTGAAAATATGAACCAAAGTGAAGTATAAGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR GCA 72 bp	ATATTTTCACTCTGCCCAAGCTTAGCGACTAATTGGTaGACTGTTTCTTCCATAGGCTCAGTAAATGCAGTA	+
Preference number: 3 (lower is better) Translates to: IFSLCPSLATNW*TVSSIGSVNAV Trigger: TACTGCATTTACTGAGCCTATGGAAGAAACAGTGCACCAATTAGTCGCTAAGCTTGGGCAGAGTGAAAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR CCA 72 bp	TTCATATTTTCACTCTGCCCAAGCTTAGCGACTAATTaGTGCACTGTTTCTTCCATAGGCTCAGTAAATGCA	+
Preference number: 3 (lower is better) Translates to: FIFSLCPSLATN*CTVSSIGSVNA Trigger: TGCATTTACTGAGCCTATGGAAGAAACAGTGCACCAATTAGTCGCTAAGCTTGGGCAGAGTGAAAATATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR CAA 90 bp	AACTGGAAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACAATGTGTTCTGGTATTaGCATTCCAGGCCATGTTCA	+
Preference number: 3 (lower is better) Translates to: NWKSADLKVHMTSVFMSHNVFWY*HSRPCS Trigger: TGAACATGGCCTGGAATGCAAATACCAGAACACATT...GTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTTCCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR CAA 90 bp	TGCACTGTTTCTTCCATAGGCTCAGTAAATGCAGTAATAACCTATCAGATTGCTAATGTGTTCTGGTATTaGCATTCCAGGCCATGTTCA	+
Preference number: 3 (lower is better) Translates to: CTVSSIGSVNAVITYQIANVFWY*HSRPCS Trigger: TGAACATGGCCTGGAATGCAAATACCAGAACACATT...AGCAATCTGATAGGTTATTACTGCATTTACTGAGCCTATGGAAGAAACAGTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR CAA 90 bp	ACTGAAGAAATAAAGCATTGGAGTTTCAAATCCTTGAATGGAATCACACTTGGGAATGTGTTCTGGTATTaGCATTCCAGGCCATGTTCA	+
Preference number: 3 (lower is better) Translates to: TEEIKHWSFKSLNGITLGNVFWY*HSRPCS Trigger: TGAACATGGCCTGGAATGCAAATACCAGAACACATT...CCCAAGTGTGATTCCATTCAAGGATTTGAAACTCCAATGCTTTATTTCTTCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR CAA 90 bp	TTACAATGTATATCATGCTTCAGAATATTCCAGTGCTTACAACCACATACCCGAATGTCACACTCTGGCTaGTGTAGATGTCTTAATAGG	+
Preference number: 3 (lower is better) Translates to: LQCISCFRIFQCLQPHTRMSHSG*CRCLNR Trigger: CCTATTAAGACATCTACACAAGCCAGAGTGTGACAT...TCGGGTATGTGGTTGTAAGCACTGGAATATTCTGAAGCATGATATACATTGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR-3UTR CAA 90 bp	TGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGATAATAATGTGTTCTGGTATTaGCATTCCAGGCCATGTTCA	+
Preference number: 3 (lower is better) Translates to: CVDVLIGTTYLGEYLKDNNVFWY*HSRPCS Trigger: TGAACATGGCCTGGAATGCAAATACCAGAACACATT...ATTATCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR CCA 72 bp	TGTTGTTGGAATGCAAACTGTGATCACTACTACAAATaGACAATTGCACACCTTTTGAACATAGATTCAGCA	+
Preference number: 3 (lower is better) Translates to: CCWNANCDHYYK*TIAHLLNIDSA Trigger: TGCTGAATCTATGTTCAAAAGGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR GCA 72 bp	TATTTACAATGTATATCATGCTTCAGAATATTCCAGTaGTTACAACCACATACCCGAGTTTTTCCTGCTCAA	+
Preference number: 3 (lower is better) Translates to: YLQCISCFRIFQ*LQPHTRVFPAQ Trigger: TTGAGCAGGAAAAACTCGGGTATGTGGTTGTAAGCACTGGAATATTCTGAAGCATGATATACATTGTAAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR TCA 72 bp	ACTGATGAGGAAGTTGAAGAATCAGAAAAATTGCTCTaGTTCAGTATTCAGATGCTGAATATAAACCCAGAT	+
Preference number: 3 (lower is better) Translates to: TDEEVEESEKLL*FSIQMLNINPD Trigger: ATCTGGGTTTATATTCAGCATCTGAATACTGAATCAGAGCAATTTTTCTGATTCTTCAACTTCCTCATCAGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101294.9 ENSMUST00000118820.8 ENSMUST00000178838.2
3UTR CCA 72 bp	AGAGATAGGGTAGAAGAAAAATCTCAAGCAACAATCTaGAAAATGTACACCCATGTTTATAGAGCTATTTCT	+
Preference number: 3 (lower is better) Translates to: RDRVEEKSQATI*KMYTHVYRAIS Trigger: AGAAATAGCTCTATAAACATGGGTGTACATTTTCCAGATTGTTGCTTGAGATTTTTCTTCTACCCTATCTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101294.9 ENSMUST00000118820.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	AAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACTCTGGCACAGGAGTTCAGGCTTaGCAGACACAGGGCCACAGA	+
Preference number: 4 (lower is better) Translates to: KSADLKVHMTSVFMSHSGTGVQA*QTQGHR Trigger: TCTGTGGCCCTGTGTCTGGCAAGCCTGAACTCCTGT...GCCAGAGTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	GGCTTGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGAACAGGAGTTCAGGCTTaGCAGACACAGGGCCACAGA	+
Preference number: 4 (lower is better) Translates to: GLCRCLNRHHLPWRILKGTGVQA*QTQGHR Trigger: TCTGTGGCCCTGTGTCTGGCAAGCCTGAACTCCTGT...TCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	ACCTCTTTCCTTTCTCTAAAGCATAAAGGCCATCTGACTCATGTTGCCTTAACTACAGGAGTTCAGGCTTaGCAGACACAGGGCCACAGA	+
Preference number: 4 (lower is better) Translates to: TSFLSLKHKGHLTHVALTTGVQA*QTQGHR Trigger: TCTGTGGCCCTGTGTCTGGCAAGCCTGAACTCCTGT...AGTTAAGGCAACATGAGTCAGATGGCCTTTATGCTTTAGAGAAAGGAAAGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	AACTGGAAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACACAGGAGTTCAGGCTTaGCAGACACAGGGCCACAGA	+
Preference number: 4 (lower is better) Translates to: NWKSADLKVHMTSVFMSHTGVQA*QTQGHR Trigger: TCTGTGGCCCTGTGTCTGGCAAGCCTGAACTCCTGT...GTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTTCCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR CAA 72 bp	GTCCACATGACCAGTGTCTTTATGTCACACTCTGGCTaGTGTAGATGTCTTAATAGGCACCACTTACCTTGG	+
Preference number: 4 (lower is better) Translates to: VHMTSVFMSHSG*CRCLNRHHLPW Trigger: CCAAGGTAAGTGGTGCCTATTAAGACATCTACACAAGCCAGAGTGTGACATAAAGACACTGGTCATGTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	TGTGACTTAGGTTCACAGATAAAGCTGATGACTCTAGCTGAGAGAATATGTGCGTATCATCATTGGTTCTaGGGAGAGGAAAGAGCAGGC	+
Preference number: 4 (lower is better) Translates to: CDLGSQIKLMTLAERICAYHHWF*GEERAG Trigger: GCCTGCTCTTTCCTCTCCTCAGAACCAATGATGATA...CGCACATATTCTCTCAGCTAGAGTCATCAGCTTTATCTGTGAACCTAAGTCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	GTTGGTCCAACATTACCGCATGGACATGTCACCAGCAATGATATTGAAATGCAATATCATCATTGGTTCTaGGGAGAGGAAAGAGCAGGC	+
Preference number: 4 (lower is better) Translates to: VGPTLPHGHVTSNDIEMQYHHWF*GEERAG Trigger: GCCTGCTCTTTCCTCTCCTCAGAACCAATGATGATA...TTGCATTTCAATATCATTGCTGGTGACATGTCCATGCGGTAATGTTGGACCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	ACTGAAGAAATAAAGCATTGGAGTTTCAAATCCTTGAATGGAATCACACTTGGGACAGGAGTTCAGGCTTaGCAGACACAGGGCCACAGA	+
Preference number: 4 (lower is better) Translates to: TEEIKHWSFKSLNGITLGTGVQA*QTQGHR Trigger: TCTGTGGCCCTGTGTCTGGCAAGCCTGAACTCCTGT...CCCAAGTGTGATTCCATTCAAGGATTTGAAACTCCAATGCTTTATTTCTTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	ACCTCTTTCCTTTCTCTAAAGCATAAAGGCCATCTGACTCATGTTGCCTTAACTTATCATCATTGGTTCTaGGGAGAGGAAAGAGCAGGC	+
Preference number: 4 (lower is better) Translates to: TSFLSLKHKGHLTHVALTYHHWF*GEERAG Trigger: GCCTGCTCTTTCCTCTCCTCAGAACCAATGATGATA...AGTTAAGGCAACATGAGTCAGATGGCCTTTATGCTTTAGAGAAAGGAAAGAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	AATACTGTCTTGATGAGGTACTGCAAATGTGTTCTGGTATTTGCATTCCAGGCCAACGAAAGGGGTACATaGGAAACCAAAATCTTCGCA	+
Preference number: 4 (lower is better) Translates to: NTVLMRYCKCVLVFAFQANERGT*ETKIFA Trigger: TGCGAAGATTTTGGTTTCTCATGTACCCCTTTCGTT...GGCCTGGAATGCAAATACCAGAACACATTTGCAGTACCTCATCAAGACAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	GTTGGTCCAACATTACCGCATGGACATGTCACCAGCAATGATATTGAAATGCAAAACGAAAGGGGTACATaGGAAACCAAAATCTTCGCA	+
Preference number: 4 (lower is better) Translates to: VGPTLPHGHVTSNDIEMQNERGT*ETKIFA Trigger: TGCGAAGATTTTGGTTTCTCATGTACCCCTTTCGTT...TTGCATTTCAATATCATTGCTGGTGACATGTCCATGCGGTAATGTTGGACCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	TATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGCACACCTATCATCATTGGTTCTaGGGAGAGGAAAGAGCAGGC	+
Preference number: 4 (lower is better) Translates to: YVVGMQTVITTTNGQLHTYHHWF*GEERAG Trigger: GCCTGCTCTTTCCTCTCCTCAGAACCAATGATGATA...GGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	GGCTTGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGAAGGCAAATCTTGTCTTaGAAGGCGTCTTCTGAACTC	+
Preference number: 4 (lower is better) Translates to: GLCRCLNRHHLPWRILKGRQILS*KASSEL Trigger: GAGTTCAGAAGACGCCTTTCAAGACAAGATTTGCCT...TCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	ACCTCTTTCCTTTCTCTAAAGCATAAAGGCCATCTGACTCATGTTGCCTTAACTAGGCAAATCTTGTCTTaGAAGGCGTCTTCTGAACTC	+
Preference number: 4 (lower is better) Translates to: TSFLSLKHKGHLTHVALTRQILS*KASSEL Trigger: GAGTTCAGAAGACGCCTTTCAAGACAAGATTTGCCT...AGTTAAGGCAACATGAGTCAGATGGCCTTTATGCTTTAGAGAAAGGAAAGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	AATACTGTCTTGATGAGGTACTGCAAATGTGTTCTGGTATTTGCATTCCAGGCCGGTAGAAACAAAACATaGAGAGACCAGGACCAAATG	+
Preference number: 4 (lower is better) Translates to: NTVLMRYCKCVLVFAFQAGRNKT*RDQDQM Trigger: CATTTGGTCCTGGTCTCTGCATGTTTTGTTTCTACC...GGCCTGGAATGCAAATACCAGAACACATTTGCAGTACCTCATCAAGACAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	GACCTAGTTTCAGAGAGCCAGAATTGTGGTTGTCACCTCTTTCCTTTCTCTAAAATCATGGCAACAGATTaGGCCAGATTAACATTCCTG	+
Preference number: 4 (lower is better) Translates to: DLVSESQNCGCHLFPFSKIMATD*ARLTFL Trigger: CAGGAATGTTAATCTGGCCCAATCTGTTGCCATGAT...TTTAGAGAAAGGAAAGAGGTGACAACCACAATTCTGGCTCTCTGAAACTAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	AAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACTCTGGCAAAATCTTCGCACACTaGTGCAGACCAAGAAGTAGA	+
Preference number: 4 (lower is better) Translates to: KSADLKVHMTSVFMSHSGKIFAH*CRPRSR Trigger: TCTACTTCTTGGTCTGCATCAGTGTGCGAAGATTTT...GCCAGAGTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	TGTGACTTAGGTTCACAGATAAAGCTGATGACTCTAGCTGAGAGAATATGTGCGCACAGGGCCACAGAATaGAATATTAGAATCACTCTT	+
Preference number: 4 (lower is better) Translates to: CDLGSQIKLMTLAERICAHRATE*NIRITL Trigger: AAGAGTGATTCTAATATTTCATTCTGTGGCCCTGTG...CGCACATATTCTCTCAGCTAGAGTCATCAGCTTTATCTGTGAACCTAAGTCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	TATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGCACACCAGGCAAATCTTGTCTTaGAAGGCGTCTTCTGAACTC	+
Preference number: 4 (lower is better) Translates to: YVVGMQTVITTTNGQLHTRQILS*KASSEL Trigger: GAGTTCAGAAGACGCCTTTCAAGACAAGATTTGCCT...GGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	TGCACTGTTTCTTCCATAGGCTCAGTAAATGCAGTAATAACCTATCAGATTGCTAGGCAAATCTTGTCTTaGAAGGCGTCTTCTGAACTC	+
Preference number: 4 (lower is better) Translates to: CTVSSIGSVNAVITYQIARQILS*KASSEL Trigger: GAGTTCAGAAGACGCCTTTCAAGACAAGATTTGCCT...AGCAATCTGATAGGTTATTACTGCATTTACTGAGCCTATGGAAGAAACAGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	AAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACTCTGGCGGTAGAAACAAAACATaGAGAGACCAGGACCAAATG	+
Preference number: 4 (lower is better) Translates to: KSADLKVHMTSVFMSHSGGRNKT*RDQDQM Trigger: CATTTGGTCCTGGTCTCTGCATGTTTTGTTTCTACC...GCCAGAGTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	GTTGGTCCAACATTACCGCATGGACATGTCACCAGCAATGATATTGAAATGCAAGTTCCCTATAAGACCTaGCACAAGAATAACAGTGTA	+
Preference number: 4 (lower is better) Translates to: VGPTLPHGHVTSNDIEMQVPYKT*HKNNSV Trigger: TACACTGTTATTCTTGTGCCAGGTCTTATAGGGAAC...TTGCATTTCAATATCATTGCTGGTGACATGTCCATGCGGTAATGTTGGACCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	CTTGATGAGGTACTGCAAATGTGTTCTGGTATTTGCATTCCAGGCCATGTTCAGTTTGGTTCTGTTACCTaGAGTATCATCATTGGTTCT	+
Preference number: 4 (lower is better) Translates to: LDEVLQMCSGICIPGHVQFGSVT*SIIIGS Trigger: AGAACCAATGATGATACTCCAGGTAACAGAACCAAA...CTGAACATGGCCTGGAATGCAAATACCAGAACACATTTGCAGTACCTCATCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	GGCTTGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGAATCATGGCAACAGATTaGGCCAGATTAACATTCCTG	+
Preference number: 4 (lower is better) Translates to: GLCRCLNRHHLPWRILKGIMATD*ARLTFL Trigger: CAGGAATGTTAATCTGGCCCAATCTGTTGCCATGAT...TCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	GCTATCCCTCTCCTAGGCATGTTCATACATATATACCTGAAGGTATTCTTTGGAATCATGGCAACAGATTaGGCCAGATTAACATTCCTG	+
Preference number: 4 (lower is better) Translates to: AIPLLGMFIHIYLKVFFGIMATD*ARLTFL Trigger: CAGGAATGTTAATCTGGCCCAATCTGTTGCCATGAT...TCCAAAGAATACCTTCAGGTATATATGTATGAACATGCCTAGGAGAGGGATAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	AACTGGAAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACAAAATCTTCGCACACTaGTGCAGACCAAGAAGTAGA	+
Preference number: 4 (lower is better) Translates to: NWKSADLKVHMTSVFMSHKIFAH*CRPRSR Trigger: TCTACTTCTTGGTCTGCATCAGTGTGCGAAGATTTT...GTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTTCCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	TATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGCACACCAACGAAAGGGGTACATaGGAAACCAAAATCTTCGCA	+
Preference number: 4 (lower is better) Translates to: YVVGMQTVITTTNGQLHTNERGT*ETKIFA Trigger: TGCGAAGATTTTGGTTTCTCATGTACCCCTTTCGTT...GGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	AAGACTTATACTTCACTTTGGTTCATATTTTCACTCTGCCCAAGCTTAGCGACTAACGAAAGGGGTACATaGGAAACCAAAATCTTCGCA	+
Preference number: 4 (lower is better) Translates to: KTYTSLWFIFSLCPSLATNERGT*ETKIFA Trigger: TGCGAAGATTTTGGTTTCTCATGTACCCCTTTCGTT...AGTCGCTAAGCTTGGGCAGAGTGAAAATATGAACCAAAGTGAAGTATAAGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	GTTGGTCCAACATTACCGCATGGACATGTCACCAGCAATGATATTGAAATGCAAAATCTAAAGGAAAGCTaGAGTGATAAGGTACAAAGC	+
Preference number: 4 (lower is better) Translates to: VGPTLPHGHVTSNDIEMQNLKES*SDKVQS Trigger: GCTTTGTACCTTATCACTTCAGCTTTCCTTTAGATT...TTGCATTTCAATATCATTGCTGGTGACATGTCCATGCGGTAATGTTGGACCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	TATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGCACACCGGTAGAAACAAAACATaGAGAGACCAGGACCAAATG	+
Preference number: 4 (lower is better) Translates to: YVVGMQTVITTTNGQLHTGRNKT*RDQDQM Trigger: CATTTGGTCCTGGTCTCTGCATGTTTTGTTTCTACC...GGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	GACCTAGTTTCAGAGAGCCAGAATTGTGGTTGTCACCTCTTTCCTTTCTCTAAATTTGGTTCTGTTACCTaGAGTATCATCATTGGTTCT	+
Preference number: 4 (lower is better) Translates to: DLVSESQNCGCHLFPFSKFGSVT*SIIIGS Trigger: AGAACCAATGATGATACTCCAGGTAACAGAACCAAA...TTTAGAGAAAGGAAAGAGGTGACAACCACAATTCTGGCTCTCTGAAACTAGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	ACCTCTTTCCTTTCTCTAAAGCATAAAGGCCATCTGACTCATGTTGCCTTAACTGATCCACAAAGCATTTaGTTCTGTTACCTGGAGTAT	+
Preference number: 4 (lower is better) Translates to: TSFLSLKHKGHLTHVALTDPQSI*FCYLEY Trigger: ATACTCCAGGTAACAGAACCAAATGCTTTGTGGATC...AGTTAAGGCAACATGAGTCAGATGGCCTTTATGCTTTAGAGAAAGGAAAGAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	CAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAACATTACCGCATGGACAATCATGGCAACAGATTaGGCCAGATTAACATTCCTG	+
Preference number: 4 (lower is better) Translates to: QNFTIYVLKSWSNITAWTIMATD*ARLTFL Trigger: CAGGAATGTTAATCTGGCCCAATCTGTTGCCATGAT...TGTCCATGCGGTAATGTTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	CTTGATGAGGTACTGCAAATGTGTTCTGGTATTTGCATTCCAGGCCATGTTCAGTTGTATGATTTTGTATaGAGTTGGATGTTATCAGGC	+
Preference number: 4 (lower is better) Translates to: LDEVLQMCSGICIPGHVQLYDFV*SWMLSG Trigger: GCCTGATAACATCCAACTCCATACAAAATCATACAA...CTGAACATGGCCTGGAATGCAAATACCAGAACACATTTGCAGTACCTCATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	TGTGACTTAGGTTCACAGATAAAGCTGATGACTCTAGCTGAGAGAATATGTGCGACGGTAGAAGTGGCATaGTTACTTGCAATTTTGTAT	+
Preference number: 4 (lower is better) Translates to: CDLGSQIKLMTLAERICATVEVA*LLAILY Trigger: ATACAAAATTGCAAGTAACCATGCCACTTCTACCGT...CGCACATATTCTCTCAGCTAGAGTCATCAGCTTTATCTGTGAACCTAAGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	GTTGGTCCAACATTACCGCATGGACATGTCACCAGCAATGATATTGAAATGCAAACGGTAGAAGTGGCATaGTTACTTGCAATTTTGTAT	+
Preference number: 4 (lower is better) Translates to: VGPTLPHGHVTSNDIEMQTVEVA*LLAILY Trigger: ATACAAAATTGCAAGTAACCATGCCACTTCTACCGT...TTGCATTTCAATATCATTGCTGGTGACATGTCCATGCGGTAATGTTGGACCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	TTACAATGTATATCATGCTTCAGAATATTCCAGTGCTTACAACCACATACCCGAAAAATCTTCGCACACTaGTGCAGACCAAGAAGTAGA	+
Preference number: 4 (lower is better) Translates to: LQCISCFRIFQCLQPHTRKIFAH*CRPRSR Trigger: TCTACTTCTTGGTCTGCATCAGTGTGCGAAGATTTT...TCGGGTATGTGGTTGTAAGCACTGGAATATTCTGAAGCATGATATACATTGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	ACTGAAGAAATAAAGCATTGGAGTTTCAAATCCTTGAATGGAATCACACTTGGGAAAATCTTCGCACACTaGTGCAGACCAAGAAGTAGA	+
Preference number: 4 (lower is better) Translates to: TEEIKHWSFKSLNGITLGKIFAH*CRPRSR Trigger: TCTACTTCTTGGTCTGCATCAGTGTGCGAAGATTTT...CCCAAGTGTGATTCCATTCAAGGATTTGAAACTCCAATGCTTTATTTCTTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	ACCTCTTTCCTTTCTCTAAAGCATAAAGGCCATCTGACTCATGTTGCCTTAACTAATCTAAAGGAAAGCTaGAGTGATAAGGTACAAAGC	+
Preference number: 4 (lower is better) Translates to: TSFLSLKHKGHLTHVALTNLKES*SDKVQS Trigger: GCTTTGTACCTTATCACTTCAGCTTTCCTTTAGATT...AGTTAAGGCAACATGAGTCAGATGGCCTTTATGCTTTAGAGAAAGGAAAGAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	CAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAACATTACCGCATGGACACACAGGGCCACAGAATaGAATATTAGAATCACTCTT	+
Preference number: 4 (lower is better) Translates to: QNFTIYVLKSWSNITAWTHRATE*NIRITL Trigger: AAGAGTGATTCTAATATTTCATTCTGTGGCCCTGTG...TGTCCATGCGGTAATGTTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	AAGACTTATACTTCACTTTGGTTCATATTTTCACTCTGCCCAAGCTTAGCGACTCACAGGGCCACAGAATaGAATATTAGAATCACTCTT	+
Preference number: 4 (lower is better) Translates to: KTYTSLWFIFSLCPSLATHRATE*NIRITL Trigger: AAGAGTGATTCTAATATTTCATTCTGTGGCCCTGTG...AGTCGCTAAGCTTGGGCAGAGTGAAAATATGAACCAAAGTGAAGTATAAGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	ACCTCTTTCCTTTCTCTAAAGCATAAAGGCCATCTGACTCATGTTGCCTTAACTAACAGTGTATGTCACTaGATAAATGAAGTACCGGAA	+
Preference number: 4 (lower is better) Translates to: TSFLSLKHKGHLTHVALTNSVCH*INEVPE Trigger: TTCCGGTACTTCATTTATGCAGTGACATACACTGTT...AGTTAAGGCAACATGAGTCAGATGGCCTTTATGCTTTAGAGAAAGGAAAGAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	ACTGAAGAAATAAAGCATTGGAGTTTCAAATCCTTGAATGGAATCACACTTGGGGGTAGAAACAAAACATaGAGAGACCAGGACCAAATG	+
Preference number: 4 (lower is better) Translates to: TEEIKHWSFKSLNGITLGGRNKT*RDQDQM Trigger: CATTTGGTCCTGGTCTCTGCATGTTTTGTTTCTACC...CCCAAGTGTGATTCCATTCAAGGATTTGAAACTCCAATGCTTTATTTCTTCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	TTACAATGTATATCATGCTTCAGAATATTCCAGTGCTTACAACCACATACCCGAGGTAGAAACAAAACATaGAGAGACCAGGACCAAATG	+
Preference number: 4 (lower is better) Translates to: LQCISCFRIFQCLQPHTRGRNKT*RDQDQM Trigger: CATTTGGTCCTGGTCTCTGCATGTTTTGTTTCTACC...TCGGGTATGTGGTTGTAAGCACTGGAATATTCTGAAGCATGATATACATTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	AAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACTCTGGCAGACCAAGAAGTAGATaGTGGCATACATGTTTACAT	+
Preference number: 4 (lower is better) Translates to: KSADLKVHMTSVFMSHSGRPRSR*WHTCLH Trigger: ATGTAAACATGTATGCCAGCATCTACTTCTTGGTCT...GCCAGAGTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	GCTATCCCTCTCCTAGGCATGTTCATACATATATACCTGAAGGTATTCTTTGGAAGACCAAGAAGTAGATaGTGGCATACATGTTTACAT	+
Preference number: 4 (lower is better) Translates to: AIPLLGMFIHIYLKVFFGRPRSR*WHTCLH Trigger: ATGTAAACATGTATGCCAGCATCTACTTCTTGGTCT...TCCAAAGAATACCTTCAGGTATATATGTATGAACATGCCTAGGAGAGGGATAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	AACTGGAAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACGTTCCCTATAAGACCTaGCACAAGAATAACAGTGTA	+
Preference number: 4 (lower is better) Translates to: NWKSADLKVHMTSVFMSHVPYKT*HKNNSV Trigger: TACACTGTTATTCTTGTGCCAGGTCTTATAGGGAAC...GTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTTCCAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	TATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGCACACCGTTCCCTATAAGACCTaGCACAAGAATAACAGTGTA	+
Preference number: 4 (lower is better) Translates to: YVVGMQTVITTTNGQLHTVPYKT*HKNNSV Trigger: TACACTGTTATTCTTGTGCCAGGTCTTATAGGGAAC...GGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	GGCTTGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGATTTGGTTCTGTTACCTaGAGTATCATCATTGGTTCT	+
Preference number: 4 (lower is better) Translates to: GLCRCLNRHHLPWRILKGFGSVT*SIIIGS Trigger: AGAACCAATGATGATACTCCAGGTAACAGAACCAAA...TCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACAAGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	TATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGCACACCGATCCACAAAGCATTTaGTTCTGTTACCTGGAGTAT	+
Preference number: 4 (lower is better) Translates to: YVVGMQTVITTTNGQLHTDPQSI*FCYLEY Trigger: ATACTCCAGGTAACAGAACCAAATGCTTTGTGGATC...GGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	GTTGGTCCAACATTACCGCATGGACATGTCACCAGCAATGATATTGAAATGCAATTGTATGATTTTGTATaGAGTTGGATGTTATCAGGC	+
Preference number: 4 (lower is better) Translates to: VGPTLPHGHVTSNDIEMQLYDFV*SWMLSG Trigger: GCCTGATAACATCCAACTCCATACAAAATCATACAA...TTGCATTTCAATATCATTGCTGGTGACATGTCCATGCGGTAATGTTGGACCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	AATACTGTCTTGATGAGGTACTGCAAATGTGTTCTGGTATTTGCATTCCAGGCCTTGTATGATTTTGTATaGAGTTGGATGTTATCAGGC	+
Preference number: 4 (lower is better) Translates to: NTVLMRYCKCVLVFAFQALYDFV*SWMLSG Trigger: GCCTGATAACATCCAACTCCATACAAAATCATACAA...GGCCTGGAATGCAAATACCAGAACACATTTGCAGTACCTCATCAAGACAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	GGCTTGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGAACGGTAGAAGTGGCATaGTTACTTGCAATTTTGTAT	+
Preference number: 4 (lower is better) Translates to: GLCRCLNRHHLPWRILKGTVEVA*LLAILY Trigger: ATACAAAATTGCAAGTAACCATGCCACTTCTACCGT...TCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACAAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	TGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGATAATAAAATCTTCGCACACTaGTGCAGACCAAGAAGTAGA	+
Preference number: 4 (lower is better) Translates to: CVDVLIGTTYLGEYLKDNKIFAH*CRPRSR Trigger: TCTACTTCTTGGTCTGCATCAGTGTGCGAAGATTTT...ATTATCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	ACACCTTTTGAACATAGATTCAGCAACTGTGGTAAGAAAACTCAGTGCTTAAAAAACGAAAGGGGTACATaGGAAACCAAAATCTTCGCA	+
Preference number: 4 (lower is better) Translates to: TPFEHRFSNCGKKTQCLKNERGT*ETKIFA Trigger: TGCGAAGATTTTGGTTTCTCATGTACCCCTTTCGTT...TTTTAAGCACTGAGTTTTCTTACCACAGTTGCTGAATCTATGTTCAAAAGGTGT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	AACTGGAAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACAATCTAAAGGAAAGCTaGAGTGATAAGGTACAAAGC	+
Preference number: 4 (lower is better) Translates to: NWKSADLKVHMTSVFMSHNLKES*SDKVQS Trigger: GCTTTGTACCTTATCACTTCAGCTTTCCTTTAGATT...GTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTTCCAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	TATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGCACACCAATCTAAAGGAAAGCTaGAGTGATAAGGTACAAAGC	+
Preference number: 4 (lower is better) Translates to: YVVGMQTVITTTNGQLHTNLKES*SDKVQS Trigger: GCTTTGTACCTTATCACTTCAGCTTTCCTTTAGATT...GGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	TATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGCACACCAACAGTGTATGTCACTaGATAAATGAAGTACCGGAA	+
Preference number: 4 (lower is better) Translates to: YVVGMQTVITTTNGQLHTNSVCH*INEVPE Trigger: TTCCGGTACTTCATTTATGCAGTGACATACACTGTT...GGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	CAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAACATTACCGCATGGACAAACAGTGTATGTCACTaGATAAATGAAGTACCGGAA	+
Preference number: 4 (lower is better) Translates to: QNFTIYVLKSWSNITAWTNSVCH*INEVPE Trigger: TTCCGGTACTTCATTTATGCAGTGACATACACTGTT...TGTCCATGCGGTAATGTTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	TGCACTGTTTCTTCCATAGGCTCAGTAAATGCAGTAATAACCTATCAGATTGCTTTTGGTTCTGTTACCTaGAGTATCATCATTGGTTCT	+
Preference number: 4 (lower is better) Translates to: CTVSSIGSVNAVITYQIAFGSVT*SIIIGS Trigger: AGAACCAATGATGATACTCCAGGTAACAGAACCAAA...AGCAATCTGATAGGTTATTACTGCATTTACTGAGCCTATGGAAGAAACAGTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	GCGCAGTATTATCAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAACATTATCATGGCAACAGATTaGGCCAGATTAACATTCCTG	+
Preference number: 4 (lower is better) Translates to: AQYYQNFTIYVLKSWSNIIMATD*ARLTFL Trigger: CAGGAATGTTAATCTGGCCCAATCTGTTGCCATGAT...AATGTTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTGATAATACTGCGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	ACCTCTTTCCTTTCTCTAAAGCATAAAGGCCATCTGACTCATGTTGCCTTAACTTTGTATGATTTTGTATaGAGTTGGATGTTATCAGGC	+
Preference number: 4 (lower is better) Translates to: TSFLSLKHKGHLTHVALTLYDFV*SWMLSG Trigger: GCCTGATAACATCCAACTCCATACAAAATCATACAA...AGTTAAGGCAACATGAGTCAGATGGCCTTTATGCTTTAGAGAAAGGAAAGAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	AAGACTTATACTTCACTTTGGTTCATATTTTCACTCTGCCCAAGCTTAGCGACTACGGTAGAAGTGGCATaGTTACTTGCAATTTTGTAT	+
Preference number: 4 (lower is better) Translates to: KTYTSLWFIFSLCPSLATTVEVA*LLAILY Trigger: ATACAAAATTGCAAGTAACCATGCCACTTCTACCGT...AGTCGCTAAGCTTGGGCAGAGTGAAAATATGAACCAAAGTGAAGTATAAGTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	TATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGCACACCACGGTAGAAGTGGCATaGTTACTTGCAATTTTGTAT	+
Preference number: 4 (lower is better) Translates to: YVVGMQTVITTTNGQLHTTVEVA*LLAILY Trigger: ATACAAAATTGCAAGTAACCATGCCACTTCTACCGT...GGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR CAA 72 bp	TGTGATCACTACTACAAATGGACAATTGCACACCTTTaGAACATAGATTCAGCAACTGTGGTAAGAAAACTC	+
Preference number: 4 (lower is better) Translates to: CDHYYKWTIAHL*NIDSATVVRKL Trigger: GAGTTTTCTTACCACAGTTGCTGAATCTATGTTCAAAAGGTGTGCAATTGTCCATTTGTAGTAGTGATCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	ACACCTTTTGAACATAGATTCAGCAACTGTGGTAAGAAAACTCAGTGCTTAAAACACAGGGCCACAGAATaGAATATTAGAATCACTCTT	+
Preference number: 4 (lower is better) Translates to: TPFEHRFSNCGKKTQCLKHRATE*NIRITL Trigger: AAGAGTGATTCTAATATTTCATTCTGTGGCCCTGTG...TTTTAAGCACTGAGTTTTCTTACCACAGTTGCTGAATCTATGTTCAAAAGGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	ATGTGCGCAGTATTATCAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAACACAGGGCCACAGAATaGAATATTAGAATCACTCTT	+
Preference number: 4 (lower is better) Translates to: MCAVLSKFHHLRLKELVQHRATE*NIRITL Trigger: AAGAGTGATTCTAATATTTCATTCTGTGGCCCTGTG...TTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTGATAATACTGCGCACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	ACTGAAGAAATAAAGCATTGGAGTTTCAAATCCTTGAATGGAATCACACTTGGGAACAGTGTATGTCACTaGATAAATGAAGTACCGGAA	+
Preference number: 4 (lower is better) Translates to: TEEIKHWSFKSLNGITLGNSVCH*INEVPE Trigger: TTCCGGTACTTCATTTATGCAGTGACATACACTGTT...CCCAAGTGTGATTCCATTCAAGGATTTGAAACTCCAATGCTTTATTTCTTCAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	TTACAATGTATATCATGCTTCAGAATATTCCAGTGCTTACAACCACATACCCGAAACAGTGTATGTCACTaGATAAATGAAGTACCGGAA	+
Preference number: 4 (lower is better) Translates to: LQCISCFRIFQCLQPHTRNSVCH*INEVPE Trigger: TTCCGGTACTTCATTTATGCAGTGACATACACTGTT...TCGGGTATGTGGTTGTAAGCACTGGAATATTCTGAAGCATGATATACATTGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	ACCAAATATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGGTTCCCTATAAGACCTaGCACAAGAATAACAGTGTA	+
Preference number: 4 (lower is better) Translates to: TKYVVGMQTVITTTNGQLVPYKT*HKNNSV Trigger: TACACTGTTATTCTTGTGCCAGGTCTTATAGGGAAC...CAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATATTTGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	ACACCTTTTGAACATAGATTCAGCAACTGTGGTAAGAAAACTCAGTGCTTAAAAGATCCACAAAGCATTTaGTTCTGTTACCTGGAGTAT	+
Preference number: 4 (lower is better) Translates to: TPFEHRFSNCGKKTQCLKDPQSI*FCYLEY Trigger: ATACTCCAGGTAACAGAACCAAATGCTTTGTGGATC...TTTTAAGCACTGAGTTTTCTTACCACAGTTGCTGAATCTATGTTCAAAAGGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR TCA 90 bp	ATGTGCGCAGTATTATCAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAAAATCTAAAGGAAAGCTaGAGTGATAAGGTACAAAGC	+
Preference number: 4 (lower is better) Translates to: MCAVLSKFHHLRLKELVQNLKES*SDKVQS Trigger: GCTTTGTACCTTATCACTTCAGCTTTCCTTTAGATT...TTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTGATAATACTGCGCACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	ATGTGCGCAGTATTATCAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAAAGACCAAGAAGTAGATaGTGGCATACATGTTTACAT	+
Preference number: 4 (lower is better) Translates to: MCAVLSKFHHLRLKELVQRPRSR*WHTCLH Trigger: ATGTAAACATGTATGCCAGCATCTACTTCTTGGTCT...TTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTGATAATACTGCGCACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR GCA 90 bp	TGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGATAATAGACCAAGAAGTAGATaGTGGCATACATGTTTACAT	+
Preference number: 4 (lower is better) Translates to: CVDVLIGTTYLGEYLKDNRPRSR*WHTCLH Trigger: ATGTAAACATGTATGCCAGCATCTACTTCTTGGTCT...ATTATCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	TTACAATGTATATCATGCTTCAGAATATTCCAGTGCTTACAACCACATACCCGACCAAGAAGTAGATGCTaGCATACATGTTTACATATT	+
Preference number: 4 (lower is better) Translates to: LQCISCFRIFQCLQPHTRPRSRC*HTCLHI Trigger: AATATGTAAACATGTATGCCAGCATCTACTTCTTGG...TCGGGTATGTGGTTGTAAGCACTGGAATATTCTGAAGCATGATATACATTGTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	ACACCTTTTGAACATAGATTCAGCAACTGTGGTAAGAAAACTCAGTGCTTAAAATTTGGTTCTGTTACCTaGAGTATCATCATTGGTTCT	+
Preference number: 4 (lower is better) Translates to: TPFEHRFSNCGKKTQCLKFGSVT*SIIIGS Trigger: AGAACCAATGATGATACTCCAGGTAACAGAACCAAA...TTTTAAGCACTGAGTTTTCTTACCACAGTTGCTGAATCTATGTTCAAAAGGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
3UTR CAA 72 bp	CAACATTACCGCATGGACATGTCACCAGCAATGATATaGAAATGCAATATTCTAAACAGGTATTGTCATAAA	+
Preference number: 4 (lower is better) Translates to: QHYRMDMSPAMI*KCNILNRYCHK Trigger: TTTATGACAATACCTGTTTAGAATATTGCATTTCAATATCATTGCTGGTGACATGTCCATGCGGTAATGTTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	ACCAAATATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGGATTTTGTATGGAGTTaGATGTTATCAGGCAAATCT	+
Preference number: 4 (lower is better) Translates to: TKYVVGMQTVITTTNGQLDFVWS*MLSGKS Trigger: AGATTTGCCTGATAACATCCAACTCCATACAAAATC...CAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATATTTGGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	ACACCTTTTGAACATAGATTCAGCAACTGTGGTAAGAAAACTCAGTGCTTAAAAGATTTTGTATGGAGTTaGATGTTATCAGGCAAATCT	+
Preference number: 4 (lower is better) Translates to: TPFEHRFSNCGKKTQCLKDFVWS*MLSGKS Trigger: AGATTTGCCTGATAACATCCAACTCCATACAAAATC...TTTTAAGCACTGAGTTTTCTTACCACAGTTGCTGAATCTATGTTCAAAAGGTGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CCA 90 bp	ATGTGCGCAGTATTATCAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAAGATTTTGTATGGAGTTaGATGTTATCAGGCAAATCT	+
Preference number: 4 (lower is better) Translates to: MCAVLSKFHHLRLKELVQDFVWS*MLSGKS Trigger: AGATTTGCCTGATAACATCCAACTCCATACAAAATC...TTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTGATAATACTGCGCACAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	TGCACTGTTTCTTCCATAGGCTCAGTAAATGCAGTAATAACCTATCAGATTGCTGACAGGAGTTCAGGCTaGCCAGACACAGGGCCACAG	+
Preference number: 5 (lower is better) Translates to: CTVSSIGSVNAVITYQIADRSSG*PDTGPQ Trigger: CTGTGGCCCTGTGTCTGGCAAGCCTGAACTCCTGTC...AGCAATCTGATAGGTTATTACTGCATTTACTGAGCCTATGGAAGAAACAGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	CAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAACATTACCGCATGGACAGACAGGAGTTCAGGCTaGCCAGACACAGGGCCACAG	+
Preference number: 5 (lower is better) Translates to: QNFTIYVLKSWSNITAWTDRSSG*PDTGPQ Trigger: CTGTGGCCCTGTGTCTGGCAAGCCTGAACTCCTGTC...TGTCCATGCGGTAATGTTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CCA 90 bp	AACATTCCTGATAGGAAGATCCACAAAGCATTTGGTTCTGTTACCTaGAGTATCATCATTGGTTCTGAGGAGAGGAAAGAGCAGGCAGGC	+
Preference number: 5 (lower is better) Translates to: NIPDRKIHKAFGSVT*SIIIGSEERKEQAG Trigger: GCCTGCCTGCTCTTTCCTCTCCTCAGAACCAATGATGATACTCCAGGTAACAGAACCAAATGCTTTGTGGATCTTCCTATCAGGAATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	GCGCAGTATTATCAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAACATTGACAGGAGTTCAGGCTaGCCAGACACAGGGCCACAG	+
Preference number: 5 (lower is better) Translates to: AQYYQNFTIYVLKSWSNIDRSSG*PDTGPQ Trigger: CTGTGGCCCTGTGTCTGGCAAGCCTGAACTCCTGTC...AATGTTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTGATAATACTGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	ACACCTTTTGAACATAGATTCAGCAACTGTGGTAAGAAAACTCAGTGCTTAAAAGACAGGAGTTCAGGCTaGCCAGACACAGGGCCACAG	+
Preference number: 5 (lower is better) Translates to: TPFEHRFSNCGKKTQCLKDRSSG*PDTGPQ Trigger: CTGTGGCCCTGTGTCTGGCAAGCCTGAACTCCTGTC...TTTTAAGCACTGAGTTTTCTTACCACAGTTGCTGAATCTATGTTCAAAAGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS TCA 90 bp	GGGTCAAGACAGGAGTTCAGGCTTGCCAGACACAGGGCCACAGAATaGAATATTAGAATCACTCTTCTGGCAAAGCAACTCTTAATTTCA	+
Preference number: 5 (lower is better) Translates to: GSRQEFRLARHRATE*NIRITLLAKQLLIS Trigger: TGAAATTAAGAGTTGCTTTGCCAGAAGAGTGATTCTAATATTTCATTCTGTGGCCCTGTGTCTGGCAAGCCTGAACTCCTGTCTTGACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CCA 90 bp	GTAACAAACCCAACCACCTCTCCGATAGTTATCATGGCAACAGATTaGGCCAGATTAACATTCCTGATAGGAAGATCCACAAAGCATTTG	+
Preference number: 5 (lower is better) Translates to: VTNPTTSPIVIMATD*ARLTFLIGRSTKHL Trigger: CAAATGCTTTGTGGATCTTCCTATCAGGAATGTTAATCTGGCCCAATCTGTTGCCATGATAACTATCGGAGAGGTGGTTGGGTTTGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CCA 90 bp	TACATATTTCAGGTAGAAACAAAACATGCAGAGACCAGGACCAAATaGCCAGTCATGGTTCAAGTAGTAAAAGATCCTCAGTGGCAGAGA	+
Preference number: 5 (lower is better) Translates to: YIFQVETKHAETRTK*PVMVQVVKDPQWQR Trigger: TCTCTGCCACTGAGGATCTTTTACTACTTGAACCATGACTGGCCATTTGGTCCTGGTCTCTGCATGTTTTGTTTCTACCTGAAATATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	GTTGGTCCAACATTACCGCATGGACATGTCACCAGCAATGATATTGAAATGCAATACCGGAAATCTGTATaGTCTCCATCTGTCTTGTTA	+
Preference number: 5 (lower is better) Translates to: VGPTLPHGHVTSNDIEMQYRKSV*SPSVLL Trigger: TAACAAGACAGATGGAGACAATACAGATTTCCGGTA...TTGCATTTCAATATCATTGCTGGTGACATGTCCATGCGGTAATGTTGGACCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	TGTGACTTAGGTTCACAGATAAAGCTGATGACTCTAGCTGAGAGAATATGTGCGTACCGGAAATCTGTATaGTCTCCATCTGTCTTGTTA	+
Preference number: 5 (lower is better) Translates to: CDLGSQIKLMTLAERICAYRKSV*SPSVLL Trigger: TAACAAGACAGATGGAGACAATACAGATTTCCGGTA...CGCACATATTCTCTCAGCTAGAGTCATCAGCTTTATCTGTGAACCTAAGTCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	GGCTTGTGTAGATGTCTTAATAGGCACCACTTACCTTGGAGAATACTTAAAGGATTCTGTTTGCAGTCATaGAAACGAAAGGGGTACATG	+
Preference number: 5 (lower is better) Translates to: GLCRCLNRHHLPWRILKGFCLQS*KRKGYM Trigger: CATGTACCCCTTTCGTTTCAATGACTGCAAACAGAA...TCCTTTAAGTATTCTCCAAGGTAAGTGGTGCCTATTAAGACATCTACACAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	ACCTCTTTCCTTTCTCTAAAGCATAAAGGCCATCTGACTCATGTTGCCTTAACTTATCATGGCAACAGATaGGGCCAGATTAACATTCCT	+
Preference number: 5 (lower is better) Translates to: TSFLSLKHKGHLTHVALTYHGNR*GQINIP Trigger: AGGAATGTTAATCTGGCCCAATCTGTTGCCATGATA...AGTTAAGGCAACATGAGTCAGATGGCCTTTATGCTTTAGAGAAAGGAAAGAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	ACCTCTTTCCTTTCTCTAAAGCATAAAGGCCATCTGACTCATGTTGCCTTAACTTACCGGAAATCTGTATaGTCTCCATCTGTCTTGTTA	+
Preference number: 5 (lower is better) Translates to: TSFLSLKHKGHLTHVALTYRKSV*SPSVLL Trigger: TAACAAGACAGATGGAGACAATACAGATTTCCGGTA...AGTTAAGGCAACATGAGTCAGATGGCCTTTATGCTTTAGAGAAAGGAAAGAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	TATGTTGTTGGAATGCAAACTGTGATCACTACTACAAATGGACAATTGCACACCTTCTGTTTGCAGTCATaGAAACGAAAGGGGTACATG	+
Preference number: 5 (lower is better) Translates to: YVVGMQTVITTTNGQLHTFCLQS*KRKGYM Trigger: CATGTACCCCTTTCGTTTCAATGACTGCAAACAGAA...GGTGTGCAATTGTCCATTTGTAGTAGTGATCACAGTTTGCATTCCAACAACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	TGCACTGTTTCTTCCATAGGCTCAGTAAATGCAGTAATAACCTATCAGATTGCTTATCATGGCAACAGATaGGGCCAGATTAACATTCCT	+
Preference number: 5 (lower is better) Translates to: CTVSSIGSVNAVITYQIAYHGNR*GQINIP Trigger: AGGAATGTTAATCTGGCCCAATCTGTTGCCATGATA...AGCAATCTGATAGGTTATTACTGCATTTACTGAGCCTATGGAAGAAACAGTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	CAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAACATTACCGCATGGACATATCATGGCAACAGATaGGGCCAGATTAACATTCCT	+
Preference number: 5 (lower is better) Translates to: QNFTIYVLKSWSNITAWTYHGNR*GQINIP Trigger: AGGAATGTTAATCTGGCCCAATCTGTTGCCATGATA...TGTCCATGCGGTAATGTTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CCA 90 bp	ACGGTAGAAGTGGCATGGTTACTTGCAATTTTGTATGATTTTGTATaGAGTTGGATGTTATCAGGCAAATCTTGTCTTGAAAGGCGTCTT	+
Preference number: 5 (lower is better) Translates to: TVEVAWLLAILYDFV*SWMLSGKSCLERRL Trigger: AAGACGCCTTTCAAGACAAGATTTGCCTGATAACATCCAACTCCATACAAAATCATACAAAATTGCAAGTAACCATGCCACTTCTACCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	AACTGGAAAAGTGCAGATTTAAAAGTCCACATGACCAGTGTCTTTATGTCACACTACCGGAAATCTGTATaGTCTCCATCTGTCTTGTTA	+
Preference number: 5 (lower is better) Translates to: NWKSADLKVHMTSVFMSHYRKSV*SPSVLL Trigger: TAACAAGACAGATGGAGACAATACAGATTTCCGGTA...GTGTGACATAAAGACACTGGTCATGTGGACTTTTAAATCTGCACTTTTCCAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	ACTGAAGAAATAAAGCATTGGAGTTTCAAATCCTTGAATGGAATCACACTTGGGTATCATGGCAACAGATaGGGCCAGATTAACATTCCT	+
Preference number: 5 (lower is better) Translates to: TEEIKHWSFKSLNGITLGYHGNR*GQINIP Trigger: AGGAATGTTAATCTGGCCCAATCTGTTGCCATGATA...CCCAAGTGTGATTCCATTCAAGGATTTGAAACTCCAATGCTTTATTTCTTCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	ACTGAAGAAATAAAGCATTGGAGTTTCAAATCCTTGAATGGAATCACACTTGGGTACCGGAAATCTGTATaGTCTCCATCTGTCTTGTTA	+
Preference number: 5 (lower is better) Translates to: TEEIKHWSFKSLNGITLGYRKSV*SPSVLL Trigger: TAACAAGACAGATGGAGACAATACAGATTTCCGGTA...CCCAAGTGTGATTCCATTCAAGGATTTGAAACTCCAATGCTTTATTTCTTCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	GCGCAGTATTATCAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAACATTTTCTGTTTGCAGTCATaGAAACGAAAGGGGTACATG	+
Preference number: 5 (lower is better) Translates to: AQYYQNFTIYVLKSWSNIFCLQS*KRKGYM Trigger: CATGTACCCCTTTCGTTTCAATGACTGCAAACAGAA...AATGTTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTGATAATACTGCGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	ATGTGCGCAGTATTATCAAAATTTCACCATTTACGTCTTAAAGAGTTGGTCCAATTCTGTTTGCAGTCATaGAAACGAAAGGGGTACATG	+
Preference number: 5 (lower is better) Translates to: MCAVLSKFHHLRLKELVQFCLQS*KRKGYM Trigger: CATGTACCCCTTTCGTTTCAATGACTGCAAACAGAA...TTGGACCAACTCTTTAAGACGTAAATGGTGAAATTTTGATAATACTGCGCACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS-3UTR CAA 90 bp	ACACCTTTTGAACATAGATTCAGCAACTGTGGTAAGAAAACTCAGTGCTTAAAATATCATGGCAACAGATaGGGCCAGATTAACATTCCT	+
Preference number: 5 (lower is better) Translates to: TPFEHRFSNCGKKTQCLKYHGNR*GQINIP Trigger: AGGAATGTTAATCTGGCCCAATCTGTTGCCATGATA...TTTTAAGCACTGAGTTTTCTTACCACAGTTGCTGAATCTATGTTCAAAAGGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CAA 90 bp	GGAAGATCCACAAAGCATTTGGTTCTGTTACCTGGAGTATCATCATaGGTTCTGAGGAGAGGAAAGAGCAGGCAGGCAAGGCAGATGATC	+
Preference number: 6 (lower is better) Translates to: GRSTKHLVLLPGVSS*VLRRGKSRQARQMI Trigger: GATCATCTGCCTTGCCTGCCTGCTCTTTCCTCTCCTCAGAACCAATGATGATACTCCAGGTAACAGAACCAAATGCTTTGTGGATCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CAA 72 bp	ACAAAGCATTTGGTTCTGTTACCTGGAGTATCATCATaGGTTCTGAGGAGAGGAAAGAGCAGGCAGGCAAGG	+
Preference number: 6 (lower is better) Translates to: TKHLVLLPGVSS*VLRRGKSRQAR Trigger: CCTTGCCTGCCTGCTCTTTCCTCTCCTCAGAACCAATGATGATACTCCAGGTAACAGAACCAAATGCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CAA 72 bp	CCCAACCACCTCTCCGATAGTTATCATGGCAACAGATaGGGCCAGATTAACATTCCTGATAGGAAGATCCAC	+
Preference number: 6 (lower is better) Translates to: PNHLSDSYHGNR*GQINIPDRKIH Trigger: GTGGATCTTCCTATCAGGAATGTTAATCTGGCCCAATCTGTTGCCATGATAACTATCGGAGAGGTGGTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CCA 72 bp	CCAACCACCTCTCCGATAGTTATCATGGCAACAGATTaGGCCAGATTAACATTCCTGATAGGAAGATCCACA	+
Preference number: 6 (lower is better) Translates to: PTTSPIVIMATD*ARLTFLIGRST Trigger: TGTGGATCTTCCTATCAGGAATGTTAATCTGGCCCAATCTGTTGCCATGATAACTATCGGAGAGGTGGTTGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CAA 90 bp	GATTGGGCCAGATTAACATTCCTGATAGGAAGATCCACAAAGCATTaGGTTCTGTTACCTGGAGTATCATCATTGGTTCTGAGGAGAGGA	+
Preference number: 6 (lower is better) Translates to: DWARLTFLIGRSTKH*VLLPGVSSLVLRRG Trigger: TCCTCTCCTCAGAACCAATGATGATACTCCAGGTAACAGAACCAAATGCTTTGTGGATCTTCCTATCAGGAATGTTAATCTGGCCCAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CCA 72 bp	GATAGGAAGATCCACAAAGCATTTGGTTCTGTTACCTaGAGTATCATCATTGGTTCTGAGGAGAGGAAAGAG	+
Preference number: 6 (lower is better) Translates to: DRKIHKAFGSVT*SIIIGSEERKE Trigger: CTCTTTCCTCTCCTCAGAACCAATGATGATACTCCAGGTAACAGAACCAAATGCTTTGTGGATCTTCCTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CAA 90 bp	AGTAACAAACCCAACCACCTCTCCGATAGTTATCATGGCAACAGATaGGGCCAGATTAACATTCCTGATAGGAAGATCCACAAAGCATTT	+
Preference number: 6 (lower is better) Translates to: SNKPNHLSDSYHGNR*GQINIPDRKIHKAF Trigger: AAATGCTTTGTGGATCTTCCTATCAGGAATGTTAATCTGGCCCAATCTGTTGCCATGATAACTATCGGAGAGGTGGTTGGGTTTGTTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CAA 90 bp	CAGCCAATAATGCTGATATACAAGTCATATTTCTGTTTGCAGTCATaGAAACGAAAGGGGTACATGAGAAACCAAAATCTTCGCACACTG	+
Preference number: 6 (lower is better) Translates to: QPIMLIYKSYFCLQS*KRKGYMRNQNLRTL Trigger: CAGTGTGCGAAGATTTTGGTTTCTCATGTACCCCTTTCGTTTCAATGACTGCAAACAGAAATATGACTTGTATATCAGCATTATTGGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS TCA 72 bp	CACGGTAGAAGTGGCATGGTTACTTGCAATTTTGTATaGTTTTGTATGGAGTTGGATGTTATCAGGCAAATC	+
Preference number: 6 (lower is better) Translates to: HGRSGMVTCNFV*FCMELDVIRQI Trigger: GATTTGCCTGATAACATCCAACTCCATACAAAATCATACAAAATTGCAAGTAACCATGCCACTTCTACCGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CAA 72 bp	AGATTAACATTCCTGATAGGAAGATCCACAAAGCATTaGGTTCTGTTACCTGGAGTATCATCATTGGTTCTG	+
Preference number: 6 (lower is better) Translates to: RLTFLIGRSTKH*VLLPGVSSLVL Trigger: CAGAACCAATGATGATACTCCAGGTAACAGAACCAAATGCTTTGTGGATCTTCCTATCAGGAATGTTAATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2
CDS CCA 72 bp	GTGGCATGGTTACTTGCAATTTTGTATGATTTTGTATaGAGTTGGATGTTATCAGGCAAATCTTGTCTTGAA	+
Preference number: 6 (lower is better) Translates to: VAWLLAILYDFV*SWMLSGKSCLE Trigger: TTCAAGACAAGATTTGCCTGATAACATCCAACTCCATACAAAATCATACAAAATTGCAAGTAACCATGCCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000101294.9 ENSMUST00000117310.8 ENSMUST00000118820.8 ENSMUST00000120971.8 ENSMUST00000178838.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu