Pregenerated sensors for GPR173 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056679Ensembl transcript IDs: ENSMUST00000070316.12
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGAGTTGCCTCAGTTATGGATGGTTTGAGAGCCTGGACTGAAGCTTaGAAGAGAAGGCTTCTGTATGGGTCCCACCCTTCCCCTGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: RVASVMDGLRAWTEA*KRRLLYGSHPSPAA Trigger: AGCAGCAGGGGAAGGGTGGGACCCATACAGAAGCCTTCTCTTTCAAGCTTCAGTCCAGGCTCTCAAACCATCCATAACTGAGGCAACTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR GCA 90 bp | GGGCCACTCCACAACCAGGGTCATCAATATCTCTTCTGCCTAGAGTaGCCCCTTCATTGCTTTTGGGTCAAGACTACCTCAGTTCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: GPLHNQGHQYLFCLE*PLHCFWVKTTSVQG Trigger: GCCCTGAACTGAGGTAGTCTTGACCCAAAAGCAATGAAGGGGGCACTCTAGGCAGAAGAGATATTGATGACCCTGGTTGTGGAGTGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR CCA 90 bp | GGAGCCCATCCCCCATTCTGCTCTTCATCTAGCCTGGGCACATCATaGAGGCTCTTCTTTGTATGCTCTTGGCTTCTCAAACAGCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: GAHPPFCSSSSLGTS*RLFFVCSWLLKQPQ Trigger: TTGAGGCTGTTTGAGAAGCCAAGAGCATACAAAGAAGAGCCTCCATGATGTGCCCAGGCTAGATGAAGAGCAGAATGGGGGATGGGCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR CCA 90 bp | ACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTaGTCTTTGCACCCCAGCCCTCAGAAAGGCATTTCTATCATCATC | + |
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Preference number: 1 (lower is better) Translates to: TEENPPEFTLFALPP*SLHPSPQKGISIII Trigger: GATGATGATAGAAATGCCTTTCTGAGGGCTGGGGTGCAAAGACCAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR CCA 90 bp | GATGTTTGGGGCCCAACCAAGGAGGAGCTCAAGGACTGTGAGGCTTaGAAGGGACAAAAAGAGGTCAAGCAGAAATGGACTCAATTCCAC | + |
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Preference number: 1 (lower is better) Translates to: DVWGPTKEELKDCEA*KGQKEVKQKWTQFH Trigger: GTGGAATTGAGTCCATTTCTGCTTGACCTCTTTTTGTCCCTTCCAAGCCTCACAGTCCTTGAGCTCCTCCTTGGTTGGGCCCCAAACATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR GCA 90 bp | ATGAACGGTGGTTTGGAAGGACACACATTAAGTACTGAAGAGCGGTaGCTATGTGGGGTTGGAAGGATGGGATCAGGAATGGGTGATGAA | + |
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Preference number: 1 (lower is better) Translates to: MNGGLEGHTLSTEER*LCGVGRMGSGMGDE Trigger: TTCATCACCCATTCCTGATCCCATCCTTCCAACCCCACATAGGCACCGCTCTTCAGTACTTAATGTGTGTCCTTCCAAACCACCGTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR TCA 90 bp | TCTTTGTATGCTCTTGGCTTCTCAAACAGCCTCAAGAAACACCTGTaGAGTCTGGACATGGTAGGGAGGGATTGGAGATTGGGCTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: SLYALGFSNSLKKHL*SLDMVGRDWRLGFG Trigger: TCCAAAGCCCAATCTCCAATCCCTCCCTACCATGTCCAGACTTCACAGGTGTTTCTTGAGGCTGTTTGAGAAGCCAAGAGCATACAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR GCA 90 bp | TTAGGACAGGAGTTTATAAGGAAGGAAAGGAGATGGAGAGATCACTaGCCCAGACTTAGGCAAAGAGTTCCAACTTGGCTCACCAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: LGQEFIRKERRWRDH*PRLRQRVPTWLTSL Trigger: CAGACTGGTGAGCCAAGTTGGAACTCTTTGCCTAAGTCTGGGGCAGTGATCTCTCCATCTCCTTTCCTTCCTTATAAACTCCTGTCCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR CCA 90 bp | TCATCTAGCCTGGGCACATCATGGAGGCTCTTCTTTGTATGCTCTTaGCTTCTCAAACAGCCTCAAGAAACACCTGTGAAGTCTGGACAT | + |
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Preference number: 1 (lower is better) Translates to: SSSLGTSWRLFFVCS*LLKQPQETPVKSGH Trigger: ATGTCCAGACTTCACAGGTGTTTCTTGAGGCTGTTTGAGAAGCCAAGAGCATACAAAGAAGAGCCTCCATGATGTGCCCAGGCTAGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR GCA 90 bp | ACATTGGGAAGAGATGGGGTTCTAAAGTATTCTCTCCTTACCTGGTaGTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAG | + |
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Preference number: 1 (lower is better) Translates to: TLGRDGVLKYSLLTW*SEAGPKEDNFMRWE Trigger: CTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAGGTAAGGAGAGAATACTTTAGAACCCCATCTCTTCCCAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR CCA 90 bp | AGATGGGGTTCTAAAGTATTCTCTCCTTACCTGGTGCTCAGAAGCTaGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: RWGSKVFSPYLVLRS*AKGRQLYEMGVDSL Trigger: AAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAGGTAAGGAGAGAATACTTTAGAACCCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR CCA 90 bp | CTTCTGAATTTAGTCAAAGCTAAACCAAGTCCCAGCTGTATACAGTaGAACCGTAAGAAGGACTTGCAGTTTAGGCTGAGCAGTTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: LLNLVKAKPSPSCIQ*NRKKDLQFRLSSSS Trigger: AGAGGAACTGCTCAGCCTAAACTGCAAGTCCTTCTTACGGTTCCACTGTATACAGCTGGGACTTGGTTTAGCTTTGACTAAATTCAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR TCA 90 bp | TCCTTGCTCCCAAGGAATATAGCACCCCATTTGGTCCCTCTTGTCTaGAGACTTAAGCCAATATTTCCTAAACATCCAAGTCTTGCTAAA | + |
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Preference number: 1 (lower is better) Translates to: SLLPRNIAPHLVPLV*RLKPIFPKHPSLAK Trigger: TTTAGCAAGACTTGGATGTTTAGGAAATATTGGCTTAAGTCTTCAGACAAGAGGGACCAAATGGGGTGCTATATTCCTTGGGAGCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR TCA 90 bp | AATAAAAGGACCTTGCATGGACCAATGATAGAGTGTGCCAAGAACTaGGTAATAGGGTCAGCTCAATTCTGTGCACCTGAAGAAATAAGT | + |
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Preference number: 1 (lower is better) Translates to: NKRTLHGPMIECAKN*VIGSAQFCAPEEIS Trigger: ACTTATTTCTTCAGGTGCACAGAATTGAGCTGACCCTATTACTCAGTTCTTGGCACACTCTATCATTGGTCCATGCAAGGTCCTTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR GCA 90 bp | CATGAAAAATTTCAGGTTCCATCTCCTAAGCACTCTATTTCCTGCTaGAGGCACATACTAAGTTTTGTCTCCTCTCCATTGTGTGTATGT | + |
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Preference number: 1 (lower is better) Translates to: HEKFQVPSPKHSISC*RHILSFVSSPLCVC Trigger: ACATACACACAATGGAGAGGAGACAAAACTTAGTATGTGCCTGCAGCAGGAAATAGAGTGCTTAGGAGATGGAACCTGAAATTTTTCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR TCA 90 bp | ATATTCCTAGGAGGAAAAGTTAGTTATATATTCCTGGAGGAAGCTTaGGTGAACGTAGCTAAGTTTGGTATATTCTGGTTGAGGAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: IFLGGKVSYIFLEEA*VNVAKFGIFWLRSP Trigger: TGGGCTCCTCAACCAGAATATACCAAACTTAGCTACGTTCACTCAAGCTTCCTCCAGGAATATATAACTAACTTTTCCTCCTAGGAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR GCA 90 bp | ATACATGAAAAATTTCAGGTTCCATCTCCTAAGCACTCTATTTCCTaGTGCAGGCACATACTAAGTTTTGTCTCCTCTCCATTGTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: IHEKFQVPSPKHSIS*CRHILSFVSSPLCV Trigger: TACACACAATGGAGAGGAGACAAAACTTAGTATGTGCCTGCAGCAGGAAATAGAGTGCTTAGGAGATGGAACCTGAAATTTTTCATGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR GCA 90 bp | GAAGGGACAAAAAGAGGTCAAGCAGAAATGGACTCAATTCCACAGTaGCTTGAAGTTTGTATAACTTTTGATTATCAAGGTCTCCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: EGTKRGQAEMDSIPQ*LEVCITFDYQGLQR Trigger: TCTTTGGAGACCTTGATAATCAAAAGTTATACAAACTTCAAGGCACTGTGGAATTGAGTCCATTTCTGCTTGACCTCTTTTTGTCCCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAAACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGGTCCCACCCTTCCCCTaGTGCTGGCCCCCGTATGGT | + |
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Preference number: 2 (lower is better) Translates to: KGNGGKPSRVYPICPPTLVPPFP*CWPPYG Trigger: ACCATACGGGGGCCAGCAGCAGGGGAAGGGTGGGAC...CAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTTTCCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR GCA 90 bp | CCTTACCTGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGACCACCCTTCCCCTGCTaGTGGCCCCCGTATGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: PYLVLRSWAKGRQLYEMGPPFPC*WPPYGD Trigger: ATCACCATACGGGGGCCAGCAGCAGGGGAAGGGTGG...TCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAGGTAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR CCA 90 bp | CATTGCTTTTGGGTCAAGACTACCTCAGTTCAGGGCCTATCTTGGGGTAGAGGTCCCTTCCCCTGCTGCTaGCCCCCGTATGGTGATTCT | + |
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Preference number: 2 (lower is better) Translates to: HCFWVKTTSVQGLSWGRGPFPCC*PPYGDS Trigger: AGAATCACCATACGGGGGCCAGCAGCAGGGGAAGGG...ACCTCTACCCCAAGATAGGCCCTGAACTGAGGTAGTCTTGACCCAAAAGCAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR CCA 90 bp | CCTTACCTGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAGAGAAGGCTTCTGTATaGGTCCCACCCTTCCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: PYLVLRSWAKGRQLYEMGEKASV*VPPFPC Trigger: GCAGGGGAAGGGTGGGACCCATACAGAAGCCTTCTC...TCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAGGTAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACGGAAAAGGAGATTGTTaGAGTGGAGGAGGCTGCGGG | + |
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Preference number: 2 (lower is better) Translates to: LVLRSWAKGRQLYEMGVDGKGDC*SGGGCG Trigger: CCCGCAGCCTCCTCCACTTCAACAATCTCCTTTTCC...GTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGCTAAACCAAGTCCCAGCTGTATACAGTGGAACCGTAAGAAGGACTTGCGAAGGGGAGGGTGAATaGGAGCCCAGGGGACGATAC | + |
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Preference number: 2 (lower is better) Translates to: SKLNQVPAVYSGTVRRTCEGEGE*EPRGRY Trigger: GTATCGTCCCCTGGGCTCCCATTCACCCTCCCCTTC...GCAAGTCCTTCTTACGGTTCCACTGTATACAGCTGGGACTTGGTTTAGCTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR CAA 90 bp | CAACCAGGGTCATCAATATCTCTTCTGCCTAGAGTGCCCCCTTCATaGCTTTTGGGTCAAGACTACCTCAGTTCAGGGCCTATCTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: QPGSSISLLPRVPPS*LLGQDYLSSGPILG Trigger: CCCCAAGATAGGCCCTGAACTGAGGTAGTCTTGACCCAAAAGCAATGAAGGGGGCACTCTAGGCAGAAGAGATATTGATGACCCTGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR CAA 90 bp | AACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTaGGTCTTTGCACCCCAGCCCTCAGAAAGGCATTTCTATCATCAT | + |
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Preference number: 2 (lower is better) Translates to: NGGKPSRVYPICPPT*VFAPQPSERHFYHH Trigger: ATGATGATAGAAATGCCTTTCTGAGGGCTGGGGTGCAAAGACCAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR TCA 90 bp | AAACTTCTGGGAAGGATGTTTGGGGCCCAACCAAGGAGGAGCTCAAGGACTGTGTTTGAGAGCCTGGACTaGAGCTTGAAAGAGAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: KLLGRMFGAQPRRSSRTVFESLD*SLKEKA Trigger: AGCCTTCTCTTTCAAGCTTCAGTCCAGGCTCTCAAA...CACAGTCCTTGAGCTCCTCCTTGGTTGGGCCCCAAACATCCTTCCCAGAAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR TCA 90 bp | CATTGCTTTTGGGTCAAGACTACCTCAGTTCAGGGCCTATCTTGGGGTAGAGGTGGAGCTCAAGGACTGTaGGGCTTGGAAGGGACAAAA | + |
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Preference number: 2 (lower is better) Translates to: HCFWVKTTSVQGLSWGRGGAQGL*GLEGTK Trigger: TTTTGTCCCTTCCAAGCCTCACAGTCCTTGAGCTCC...ACCTCTACCCCAAGATAGGCCCTGAACTGAGGTAGTCTTGACCCAAAAGCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAAACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGCAGTTATGGATGGTTTaGGAGCCTGGACTGAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: KGNGGKPSRVYPICPPTLQLWMV*EPGLKL Trigger: AAGCTTCAGTCCAGGCTCTCAAACCATCCATAACTG...CAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTTTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR GCA 90 bp | TGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACGCCCATCCCCCATTCTaGTCTTCATCTAGCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: WAKGRQLYEMGVDSLDTYAHPPF*SSSSLG Trigger: GCCCAGGCTAGATGAAGAGCAGAATGGGGGATGGGC...GTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR CCA 90 bp | AACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGGTCTTTGAGGTCAAGCAGAAATaGACTCAATTCCACAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: NGGKPSRVYPICPPTLVFEVKQK*TQFHSA Trigger: GGCACTGTGGAATTGAGTCCATTTCTGCTTGACCTC...AAAGACCAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR CCA 90 bp | AACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGGTCTTTAAGGACTGTGAGGCTTaGAAGGGACAAAAAGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: NGGKPSRVYPICPPTLVFKDCEA*KGQKEV Trigger: GACCTCTTTTTGTCCCTTCCAAGCCTCACAGTCCTT...AAAGACCAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR GCA 90 bp | CTGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACAGATGGAGAGATCACTaGCCCAGACTTAGGCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: LVLRSWAKGRQLYEMGVDRWRDH*PRLRQR Trigger: TCTTTGCCTAAGTCTGGGGCAGTGATCTCTCCATCT...GTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAAACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGCATCAATATCTCTTCTaGCTAGAGTGCCCCCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: KGNGGKPSRVYPICPPTLHQYLF*LECPLH Trigger: ATGAAGGGGGCACTCTAGGCAGAAGAGATATTGATG...CAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTTTCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAAACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGCCCCTTCATTGCTTTTaGGTCAAGACTACCTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: KGNGGKPSRVYPICPPTLPLHCF*VKTTSV Trigger: AACTGAGGTAGTCTTGACCCAAAAGCAATGAAGGGG...CAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTTTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR CAA 90 bp | GACTTAAGCCAATATTTCCTAAACATCCAAGTCTTGCTAAAGGATTaGGAAGGGGAGGGTGAATGGGAGCCCAGGGGACGATACGATCTC | + |
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Preference number: 2 (lower is better) Translates to: DLSQYFLNIQVLLKD*EGEGEWEPRGRYDL Trigger: GAGATCGTATCGTCCCCTGGGCTCCCATTCACCCTCCCCTTCCAAATCCTTTAGCAAGACTTGGATGTTTAGGAAATATTGGCTTAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGCTAAACCAAGTCCCAGCTGTATACAGTGGAACCGTAAGAAGGACTTGCAGGAGATTGTTGAAGTaGAGGAGGCTGCGGGACAAT | + |
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Preference number: 2 (lower is better) Translates to: SKLNQVPAVYSGTVRRTCRRLLK*RRLRDN Trigger: ATTGTCCCGCAGCCTCCTCCACTTCAACAATCTCCT...GCAAGTCCTTCTTACGGTTCCACTGTATACAGCTGGGACTTGGTTTAGCTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR TCA 90 bp | TGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACTTGGTATATTCTGGTTaGGGAGCCCATCCCCCATTC | + |
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Preference number: 2 (lower is better) Translates to: WAKGRQLYEMGVDSLDTYLVYSG*GAHPPF Trigger: GAATGGGGGATGGGCTCCTCAACCAGAATATACCAA...GTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR CCA 90 bp | CCTTACCTGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGATTGGAGATTGGGCTTTaGACCAAGGTTAGCCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: PYLVLRSWAKGRQLYEMGLEIGL*TKVSQK Trigger: TTTTTGGCTAACCTTGGTCCAAAGCCCAATCTCCAA...TCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAGGTAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR CCA 90 bp | AACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGGTCTTTTTCTTTGTATGCTCTTaGCTTCTCAAACAGCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: NGGKPSRVYPICPPTLVFFFVCS*LLKQPQ Trigger: TTGAGGCTGTTTGAGAAGCCAAGAGCATACAAAGAA...AAAGACCAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAAACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGGAAGTAAGCCCAAAGTaGTTTTTGTCCATGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: KGNGGKPSRVYPICPPTLEVSPK*FLSMEK Trigger: CTTTTCCATGGACAAAAACCACTTTGGGCTTACTTC...CAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTTTCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR CAA 90 bp | GCTAAACCAAGTCCCAGCTGTATACAGTGGAACCGTAAGAAGGACTaGCAGTTTAGGCTGAGCAGTTCCTCTAAAAGCCATTACATTGCA | + |
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Preference number: 2 (lower is better) Translates to: AKPSPSCIQWNRKKD*QFRLSSSSKSHYIA Trigger: TGCAATGTAATGGCTTTTAGAGGAACTGCTCAGCCTAAACTGCAAGTCCTTCTTACGGTTCCACTGTATACAGCTGGGACTTGGTTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGCTAAACCAAGTCCCAGCTGTATACAGTGGAACCGTAAGAAGGACTTGCAGTGGTTTTTGTCCATaGAAAAGAGGCTTGGGACCA | + |
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Preference number: 2 (lower is better) Translates to: SKLNQVPAVYSGTVRRTCSGFCP*KRGLGP Trigger: TGGTCCCAAGCCTCTTTTCCATGGACAAAAACCACT...GCAAGTCCTTCTTACGGTTCCACTGTATACAGCTGGGACTTGGTTTAGCTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACATACATTCCCACCTTGGTCTTTaGACCCCAGCCCTCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: KGRQLYEMGVDSLDTYIHSHLGL*TPALRK Trigger: CTTTCTGAGGGCTGGGGTGCAAAGACCAAGGTGGGA...ATGTATGTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR TCA 90 bp | TGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACTCATACCTCCTCATGTaGTCATACACAGATAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: WAKGRQLYEMGVDSLDTYSYLLM*SYTDRR Trigger: TCTCCTATCTGTGTATGATCACATGAGGAGGTATGA...GTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR GCA 90 bp | TGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACAGGCTCTTCTTTGTATaGTCTTGGCTTCTCAAACAG | + |
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Preference number: 2 (lower is better) Translates to: WAKGRQLYEMGVDSLDTYRLFFV*SWLLKQ Trigger: CTGTTTGAGAAGCCAAGAGCATACAAAGAAGAGCCT...GTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCCTTCTGAATTTAGTCAAAGCTAAACCAAGTCCCAGCTGTATACAGTGGAAGGCAGGGAGGGCATaGGAAAAGGAGATTGTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SFLLNLVKAKPSPSCIQWKAGRA*EKEIVE Trigger: TTCAACAATCTCCTTTTCCCATGCCCTCCCTGCCTT...CCACTGTATACAGCTGGGACTTGGTTTAGCTTTGACTAAATTCAGAAGGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CAA 90 bp | TGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTaGACTCTCTTGACACATACATACATGAAAAATTTCAGGTTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: CSEAGPKEDNFMRWE*TLLTHTYMKNFRFH Trigger: ATGGAACCTGAAATTTTTCATGTATGTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR-3UTR TCA 90 bp | AAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACATACATGCCTGGACTGAAGCTTaGAAGAGAAGGCTTCTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: KGRQLYEMGVDSLDTYIHAWTEA*KRRLLY Trigger: ATACAGAAGCCTTCTCTTTCAAGCTTCAGTCCAGGC...ATGTATGTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR-3UTR TCA 90 bp | AAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACATACATCTATTTCCCCATGGGTaGCTTTCCCTGTCAGCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: KGRQLYEMGVDSLDTYIHLFPHG*LSLSAY Trigger: ATAAGCTGACAGGGAAAGTCACCCATGGGGAAATAG...ATGTATGTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR-3UTR GCA 90 bp | AAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACATACATGACTCAATTCCACAGTaGCTTGAAGTTTGTATAACT | + |
|
Preference number: 2 (lower is better) Translates to: KGRQLYEMGVDSLDTYIHDSIPQ*LEVCIT Trigger: AGTTATACAAACTTCAAGGCACTGTGGAATTGAGTC...ATGTATGTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR GCA 72 bp | AAAGAGAAGGCTTCTGTATGGGTCCCACCCTTCCCCTaGTGCTGGCCCCCGTATGGTGATTCTGACTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: KEKASVWVPPFP*CWPPYGDSDFP Trigger: GGGAAAGTCAGAATCACCATACGGGGGCCAGCAGCAGGGGAAGGGTGGGACCCATACAGAAGCCTTCTCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR GCA 72 bp | CAAACACACATTCCCAGCCTCTCAGCTCCTCTGGCTTaGTTTTCCAGGGCCACTCCACAACCAGGGTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: QTHIPSLSAPLA*FSRATPQPGSS Trigger: TGATGACCCTGGTTGTGGAGTGGCCCTGGAAAAGCAAGCCAGAGGAGCTGAGAGGCTGGGAATGTGTGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACCTCAGCTCCTCTGGCTaGCTTTTCCAGGGCCACTCC | + |
|
Preference number: 3 (lower is better) Translates to: LVLRSWAKGRQLYEMGVDLSSSG*LFQGHS Trigger: GGAGTGGCCCTGGAAAAGCAAGCCAGAGGAGCTGAG...GTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CCA 72 bp | AACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTaGTCTTTGCACCCCAGCCCTCAGAAAGGCATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NPPEFTLFALPP*SLHPSPQKGIS Trigger: AGAAATGCCTTTCTGAGGGCTGGGGTGCAAAGACCAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR GCA 72 bp | GGGCCACTCCACAACCAGGGTCATCAATATCTCTTCTaGCTAGAGTGCCCCCTTCATTGCTTTTGGGTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GPLHNQGHQYLF*LECPLHCFWVK Trigger: CTTGACCCAAAAGCAATGAAGGGGGCACTCTAGGCAGAAGAGATATTGATGACCCTGGTTGTGGAGTGGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CCA 72 bp | GAGGAGCCCATCCCCCATTCTGCTCTTCATCTAGCCTaGGCACATCATGGAGGCTCTTCTTTGTATGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: EEPIPHSALHLA*AHHGGSSLYAL Trigger: AAGAGCATACAAAGAAGAGCCTCCATGATGTGCCCAGGCTAGATGAAGAGCAGAATGGGGGATGGGCTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CCA 72 bp | GGCCCAACCAAGGAGGAGCTCAAGGACTGTGAGGCTTaGAAGGGACAAAAAGAGGTCAAGCAGAAATGGACT | + |
|
Preference number: 3 (lower is better) Translates to: GPTKEELKDCEA*KGQKEVKQKWT Trigger: AGTCCATTTCTGCTTGACCTCTTTTTGTCCCTTCCAAGCCTCACAGTCCTTGAGCTCCTCCTTGGTTGGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR TCA 72 bp | GGAGGTGTTGGCGAGTTGCCTCAGTTATGGATGGTTTaGGAGCCTGGACTGAAGCTTGAAAGAGAAGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GGVGELPQLWMV*EPGLKLEREGF Trigger: GAAGCCTTCTCTTTCAAGCTTCAGTCCAGGCTCTCAAACCATCCATAACTGAGGCAACTCGCCAACACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR TCA 72 bp | CATGAACGGTGGTTTGGAAGGACACACATTAAGTACTaGAGAGCGGTGCCTATGTGGGGTTGGAAGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: HERWFGRTHIKY*RAVPMWGWKDG Trigger: CCCATCCTTCCAACCCCACATAGGCACCGCTCTTCAGTACTTAATGTGTGTCCTTCCAAACCACCGTTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR-3UTR CAA 90 bp | CCTTACCTGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGACATGGGAAAAGGAGATaGTTGAAGTGGAGGAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PYLVLRSWAKGRQLYEMGHGKRR*LKWRRL Trigger: CAGCCTCCTCCACTTCAACAATCTCCTTTTCCCATG...TCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAGGTAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR TCA 72 bp | GCTCTTGGCTTCTCAAACAGCCTCAAGAAACACCTGTaGAGTCTGGACATGGTAGGGAGGGATTGGAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: ALGFSNSLKKHL*SLDMVGRDWRL Trigger: CAATCTCCAATCCCTCCCTACCATGTCCAGACTTCACAGGTGTTTCTTGAGGCTGTTTGAGAAGCCAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR GCA 72 bp | GGTTTGGAAGGACACACATTAAGTACTGAAGAGCGGTaGCTATGTGGGGTTGGAAGGATGGGATCAGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: GLEGHTLSTEER*LCGVGRMGSGM Trigger: CATTCCTGATCCCATCCTTCCAACCCCACATAGGCACCGCTCTTCAGTACTTAATGTGTGTCCTTCCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CCA 72 bp | CCCCCATTCTGCTCTTCATCTAGCCTGGGCACATCATaGAGGCTCTTCTTTGTATGCTCTTGGCTTCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PPFCSSSSLGTS*RLFFVCSWLLK Trigger: TTTGAGAAGCCAAGAGCATACAAAGAAGAGCCTCCATGATGTGCCCAGGCTAGATGAAGAGCAGAATGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACTGTCTTGCTAAAGGATTaGGAAGGGGAGGGTGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: WCSEAGPKEDNFMRWELTVLLKD*EGEGEW Trigger: CCATTCACCCTCCCCTTCCAAATCCTTTAGCAAGAC...AGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR-3UTR CAA 90 bp | CATTGCTTTTGGGTCAAGACTACCTCAGTTCAGGGCCTATCTTGGGGTAGAGGTCATGGAGGCTCTTCTTaGTATGCTCTTGGCTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HCFWVKTTSVQGLSWGRGHGGSS*YALGFS Trigger: TGAGAAGCCAAGAGCATACAAAGAAGAGCCTCCATG...ACCTCTACCCCAAGATAGGCCCTGAACTGAGGTAGTCTTGACCCAAAAGCAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR-3UTR CAA 90 bp | CATTGCTTTTGGGTCAAGACTACCTCAGTTCAGGGCCTATCTTGGGGTAGAGGTGCAAAGAGTTCCAACTaGGCTCACCAGTCTGTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HCFWVKTTSVQGLSWGRGAKSSN*AHQSVE Trigger: TTCTACAGACTGGTGAGCCAAGTTGGAACTCTTTGC...ACCTCTACCCCAAGATAGGCCCTGAACTGAGGTAGTCTTGACCCAAAAGCAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACTAGAGTGCCCCCTTCATaGCTTTTGGGTCAAGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: WCSEAGPKEDNFMRWELTRVPPS*LLGQDY Trigger: GTAGTCTTGACCCAAAAGCAATGAAGGGGGCACTCT...AGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR GCA 72 bp | CACAACCAGGGTCATCAATATCTCTTCTGCCTAGAGTaGCCCCTTCATTGCTTTTGGGTCAAGACTACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HNQGHQYLFCLE*PLHCFWVKTTS Trigger: TGAGGTAGTCTTGACCCAAAAGCAATGAAGGGGGCACTCTAGGCAGAAGAGATATTGATGACCCTGGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CCA 72 bp | GGGGTGAGGATTGAATCTCCAGACATTGGGAAGAGATaGGGTTCTAAAGTATTCTCTCCTTACCTGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GVRIESPDIGKR*GSKVFSPYLVL Trigger: GAGCACCAGGTAAGGAGAGAATACTTTAGAACCCCATCTCTTCCCAATGTCTGGAGATTCAATCCTCACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGAAACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGCTAAACATCCAAGTCTaGCTAAAGGATTTGGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KGNGGKPSRVYPICPPTLLNIQV*LKDLEG Trigger: CCCTTCCAAATCCTTTAGCAAGACTTGGATGTTTAG...CAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTTTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR-3UTR CAA 90 bp | CATTGCTTTTGGGTCAAGACTACCTCAGTTCAGGGCCTATCTTGGGGTAGAGGTAGCCCAAAGTGGTTTTaGTCCATGGAAAAGAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HCFWVKTTSVQGLSWGRGSPKWF*SMEKRL Trigger: AAGCCTCTTTTCCATGGACAAAAACCACTTTGGGCT...ACCTCTACCCCAAGATAGGCCCTGAACTGAGGTAGTCTTGACCCAAAAGCAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR GCA 72 bp | GAGTTTATAAGGAAGGAAAGGAGATGGAGAGATCACTaGCCCAGACTTAGGCAAAGAGTTCCAACTTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: EFIRKERRWRDH*PRLRQRVPTWL Trigger: GAGCCAAGTTGGAACTCTTTGCCTAAGTCTGGGGCAGTGATCTCTCCATCTCCTTTCCTTCCTTATAAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CCA 72 bp | GCTCTAGGTACTCTGGAGAGTTCAACTATTTCCCCATaGGTGACTTTCCCTGTCAGCTTATACCCACATCAT | + |
|
Preference number: 3 (lower is better) Translates to: ALGTLESSTISP*VTFPVSLYPHH Trigger: ATGATGTGGGTATAAGCTGACAGGGAAAGTCACCCATGGGGAAATAGTTGAACTCTCCAGAGTACCTAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CCA 72 bp | AATTGTGGGGTTGAATTTAGCTCTGACCCCATGGTCTaGGCTCTAGGTACTCTGGAGAGTTCAACTATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: NCGVEFSSDPMV*ALGTLESSTIS Trigger: GGAAATAGTTGAACTCTCCAGAGTACCTAGAGCCCAGACCATGGGGTCAGAGCTAAATTCAACCCCACAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CCA 72 bp | GGAAGAGATGGGGTTCTAAAGTATTCTCTCCTTACCTaGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: GRDGVLKYSLLT*CSEAGPKEDNF Trigger: AAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAGGTAAGGAGAGAATACTTTAGAACCCCATCTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR GCA 72 bp | AGAGATGGGGTTCTAAAGTATTCTCTCCTTACCTGGTaGTCAGAAGCTGGGCCAAAGGAAGACAACTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: RDGVLKYSLLTW*SEAGPKEDNFM Trigger: CATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAGGTAAGGAGAGAATACTTTAGAACCCCATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CCA 72 bp | AAGCCCAAAGTGGTTTTTGTCCATGGAAAAGAGGCTTaGGACCATCCACCTGTAAGAGTGGATGGAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KPKVVFVHGKEA*DHPPVRVDGEK Trigger: TTTTTCTCCATCCACTCTTACAGGTGGATGGTCCCAAGCCTCTTTTCCATGGACAAAAACCACTTTGGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CCA 72 bp | TTAGTCAAAGCTAAACCAAGTCCCAGCTGTATACAGTaGAACCGTAAGAAGGACTTGCAGTTTAGGCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LVKAKPSPSCIQ*NRKKDLQFRLS Trigger: GCTCAGCCTAAACTGCAAGTCCTTCTTACGGTTCCACTGTATACAGCTGGGACTTGGTTTAGCTTTGACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACCTTCTTTGTATGCTCTaGGCTTCTCAAACAGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: WAKGRQLYEMGVDSLDTYLLCML*ASQTAS Trigger: TGAGGCTGTTTGAGAAGCCAAGAGCATACAAAGAAG...GTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR GCA 72 bp | AAATTTCAGGTTCCATCTCCTAAGCACTCTATTTCCTaGTGCAGGCACATACTAAGTTTTGTCTCCTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KFQVPSPKHSIS*CRHILSFVSSP Trigger: TGGAGAGGAGACAAAACTTAGTATGTGCCTGCAGCAGGAAATAGAGTGCTTAGGAGATGGAACCTGAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTCCTTCTGAATTTAGTCAAAGCTAAACCAAGTCCCAGCTGTATACAGTGGTTGAATCTCCAGACATaGGGAAGAGATGGGGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SFLLNLVKAKPSPSCIQWLNLQT*GRDGVL Trigger: TAGAACCCCATCTCTTCCCAATGTCTGGAGATTCAA...CCACTGTATACAGCTGGGACTTGGTTTAGCTTTGACTAAATTCAGAAGGAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR TCA 72 bp | CCAAGGAATATAGCACCCCATTTGGTCCCTCTTGTCTaGAGACTTAAGCCAATATTTCCTAAACATCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PRNIAPHLVPLV*RLKPIFPKHPS Trigger: ACTTGGATGTTTAGGAAATATTGGCTTAAGTCTTCAGACAAGAGGGACCAAATGGGGTGCTATATTCCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CCA 72 bp | TCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATaGGAGTTGACTCTCTTGACACATACATACATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SEAGPKEDNFMR*ELTLLTHTYMK Trigger: TTTCATGTATGTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR TCA 72 bp | GGAGGAAAAGTTAGTTATATATTCCTGGAGGAAGCTTaGGTGAACGTAGCTAAGTTTGGTATATTCTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GGKVSYIFLEEA*VNVAKFGIFWL Trigger: CAACCAGAATATACCAAACTTAGCTACGTTCACTCAAGCTTCCTCCAGGAATATATAACTAACTTTTCCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR GCA 72 bp | AAAAGAGGTCAAGCAGAAATGGACTCAATTCCACAGTaGCTTGAAGTTTGTATAACTTTTGATTATCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KRGQAEMDSIPQ*LEVCITFDYQG Trigger: ACCTTGATAATCAAAAGTTATACAAACTTCAAGGCACTGTGGAATTGAGTCCATTTCTGCTTGACCTCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGTATGGGTCCCACCCTTCCCCTGCTGCTGGCCCCCGTATGGTGATTCTCCCCAGCAAGGGGCATaGGTCCTCAGGCACTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASVWVPPFPCCWPPYGDSPQQGA*VLRHFL Trigger: CAAGAAGTGCCTGAGGACTCATGCCCCTTGCTGGGG...AGAATCACCATACGGGGGCCAGCAGCAGGGGAAGGGTGGGACCCATACAGAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGTATGGGTCCCACCCTTCCCCTGCTGCTGGCCCCCGTATGGTGATTCTAGCGATGCTCAAAGATaGACTGGTCCTCCTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASVWVPPFPCCWPPYGDSSDAQR*TGPPLG Trigger: TCCGAGAGGAGGACCAGTGCATCTTTGAGCATCGCT...AGAATCACCATACGGGGGCCAGCAGCAGGGGAAGGGTGGGACCCATACAGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGTATGGGTCCCACCCTTCCCCTGCTGCTGGCCCCCGTATGGTGATTCTCATGCAGATGACAGCTaGGCATGTCCAGAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASVWVPPFPCCWPPYGDSHADDS*ACPECH Trigger: ATGACACTCTGGACATGCGCAGCTGTCATCTGCATG...AGAATCACCATACGGGGGCCAGCAGCAGGGGAAGGGTGGGACCCATACAGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR GCA 90 bp | CCTTACCTGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGACTGGGGCACCTCCTGTaGCCCAGCAAGGGGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: PYLVLRSWAKGRQLYEMGLGHLL*PSKGHE Trigger: CTCATGCCCCTTGCTGGGGCACAGGAGGTGCCCCAG...TCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAGGTAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGACCCAGCAGAGTTGGTaGCATGGGCCCACGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGNGGKPSRVYPICPPTLTQQSW*HGPTAK Trigger: TTTGGCCGTGGGCCCATGCCACCAACTCTGCTGGGT...CAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTTTCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | CATTGCTTTTGGGTCAAGACTACCTCAGTTCAGGGCCTATCTTGGGGTAGAGGTGATACCCAGCAGAGTTaGTGGCATGGGCCCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HCFWVKTTSVQGLSWGRGDTQQS*WHGPTA Trigger: GGCCGTGGGCCCATGCCACCAACTCTGCTGGGTATC...ACCTCTACCCCAAGATAGGCCCTGAACTGAGGTAGTCTTGACCCAAAAGCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | AACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGGTCTTTCAGGAAGCAGACGATTaGGTTGACGGCAGCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NGGKPSRVYPICPPTLVFQEADD*VDGSLG Trigger: GCCCAGGCTGCCGTCAACCCAATCGTCTGCTTCCTG...AAAGACCAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGCACAGTAGGGTTCTCTaGGAGCTGGGGCACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGNGGKPSRVYPICPPTLHSRVL*ELGHLL Trigger: CAGGAGGTGCCCCAGCTCCCAGAGAACCCTACTGTG...CAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTTTCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR TCA 90 bp | AACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGGTCTTTTGCACTGAAGGTCCATaGGGAGCCATGGCGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NGGKPSRVYPICPPTLVFCTEGP*GAMAHR Trigger: TCTGTGCGCCATGGCTCCTCATGGACCTTCAGTGCA...AAAGACCAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR GCA 90 bp | AAACTTCTGGGAAGGATGTTTGGGGCCCAACCAAGGAGGAGCTCAAGGACTGTGGCTGCATGCCCATTCTaGCGGATACCCAGCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLLGRMFGAQPRRSSRTVAACPF*RIPSRV Trigger: AACTCTGCTGGGTATCCGGCAGAATGGGCATGCAGC...CACAGTCCTTGAGCTCCTCCTTGGTTGGGCCCCAAACATCCTTCCCAGAAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CAA 72 bp | AAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTaGGTCTTTGCACCCCAGCCCTCAGAAAGGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPSRVYPICPPT*VFAPQPSERHF Trigger: GAAATGCCTTTCTGAGGGCTGGGGTGCAAAGACCAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR TCA 90 bp | AACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGGTCTTTCCAGGCTTACACACATaGTCAGTCCCAGCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NGGKPSRVYPICPPTLVFPGLHT*SVPAAP Trigger: TGGTGCTGCTGGGACTGATCATGTGTGTAAGCCTGG...AAAGACCAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR GCA 90 bp | TCAAAGCTAAACCAAGTCCCAGCTGTATACAGTGGAACCGTAAGAAGGACTTGCCGCCGGCTAGCTGCATaGCCATTCTGCCGGATACCC | + |
|
Preference number: 4 (lower is better) Translates to: SKLNQVPAVYSGTVRRTCRRLAA*PFCRIP Trigger: GGGTATCCGGCAGAATGGGCATGCAGCTAGCCGGCG...GCAAGTCCTTCTTACGGTTCCACTGTATACAGCTGGGACTTGGTTTAGCTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGTGGCACCATCTGCACTaGCTTCATCTTGCGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: KGNGGKPSRVYPICPPTLWHHLH*LHLAVT Trigger: CGTCACCGCAAGATGAAGCCAGTGCAGATGGTGCCA...CAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTTTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | TGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACTGCAGAGTTGGTGGCATaGGCCCACGGCCAAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: WCSEAGPKEDNFMRWELTAELVA*AHGQNQ Trigger: CTGGTTTTGGCCGTGGGCCCATGCCACCAACTCTGC...AGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | AACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGGTCTTTTCATCCAAACAGCAGTaGCCAAGTAGCGGTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NGGKPSRVYPICPPTLVFSSKQQ*PSSGGA Trigger: TGCCCCACCGCTACTTGGCCACTGCTGTTTGGATGA...AAAGACCAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CAA 72 bp | CCCGAGTTTACCCTATTTGCCCTCCCACCTTGGTCTTaGCACCCCAGCCCTCAGAAAGGCATTTCTATCATC | + |
|
Preference number: 4 (lower is better) Translates to: PEFTLFALPPWS*HPSPQKGISII Trigger: GATGATAGAAATGCCTTTCTGAGGGCTGGGGTGCAAAGACCAAGGTGGGAGGGCAAATAGGGTAAACTCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR GCA 90 bp | GCTTTTGGGTCAAGACTACCTCAGTTCAGGGCCTATCTTGGGGTAGAGGTGGAGGCACTGGCTTCATCTTaGGGTGACGATACTCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AFGSRLPQFRAYLGVEVEALASS*GDDTRR Trigger: TCTTCGAGTATCGTCACCGCAAGATGAAGCCAGTGC...CTCCACCTCTACCCCAAGATAGGCCCTGAACTGAGGTAGTCTTGACCCAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR GCA 90 bp | AAAGGAAACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGAACATTCGGCCCAGCTaGTTTTCACCCTTGACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KGNGGKPSRVYPICPPTLNIRPS*FSPLTS Trigger: CGAGGTCAAGGGTGAAAAGCAGCTGGGCCGAATGTT...CAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTTTCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR TCA 90 bp | TGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACTGCTGCTTTTCACCCTTaGCCTCGTCCATGCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: WCSEAGPKEDNFMRWELTAAFHP*PRPCPV Trigger: TACTGGGCATGGACGAGGTCAAGGGTGAAAAGCAGC...AGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR GCA 90 bp | GCTTTTGGGTCAAGACTACCTCAGTTCAGGGCCTATCTTGGGGTAGAGGTGGAGGCCCAGTGTGTCATTTaGTTTGAAGTAGCGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AFGSRLPQFRAYLGVEVEAQCVI*FEVAML Trigger: GAGCATCGCTACTTCAAAGCAAATGACACACTGGGC...CTCCACCTCTACCCCAAGATAGGCCCTGAACTGAGGTAGTCTTGACCCAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | AATGGGAGCCCAGGGGACGATACGATCTCTGGGAATCTATTTTACAGGAGAAACGTAGCCCCAGGGCCATaGAATGTCCAGTTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGSPGDDTISGNLFYRRNVAPGP*NVQFWL Trigger: CAGCCAAAACTGGACATTCCATGGCCCTGGGGCTAC...GTTTCTCCTGTAAAATAGATTCCCAGAGATCGTATCGTCCCCTGGGCTCCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | TCAAAGCTAAACCAAGTCCCAGCTGTATACAGTGGAACCGTAAGAAGGACTTGCCAAAGGGGAAGCAGATaGCAGAGCGTATGCCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: SKLNQVPAVYSGTVRRTCQRGSR*QSVCHR Trigger: CCGATGGCATACGCTCTGCCATCTGCTTCCCCTTTG...GCAAGTCCTTCTTACGGTTCCACTGTATACAGCTGGGACTTGGTTTAGCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | TCAAAGCTAAACCAAGTCCCAGCTGTATACAGTGGAACCGTAAGAAGGACTTGCAGAGTGTCATGCGCTTaGCATAGAAGCGGTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SKLNQVPAVYSGTVRRTCRVSCA*HRSGGG Trigger: CCCACCACCGCTTCTATGCCAAGCGCATGACACTCT...GCAAGTCCTTCTTACGGTTCCACTGTATACAGCTGGGACTTGGTTTAGCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACATACATCAGTTGGCAGCAGCCTaGCCGGTAGCCCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGRQLYEMGVDSLDTYIHQLAAA*PVAPGP Trigger: TGGCCCTGGGGCTACCGGCCAGGCTGCTGCCAACTG...ATGTATGTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR GCA 90 bp | TCAAAGCTAAACCAAGTCCCAGCTGTATACAGTGGAACCGTAAGAAGGACTTGCGGGACAAGATGGCATTaGCTGCCAGGCTTACACACA | + |
|
Preference number: 4 (lower is better) Translates to: SKLNQVPAVYSGTVRRTCGTRWH*LPGLHT Trigger: TGTGTGTAAGCCTGGCAGGCAATGCCATCTTGTCCC...GCAAGTCCTTCTTACGGTTCCACTGTATACAGCTGGGACTTGGTTTAGCTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR GCA 90 bp | AATGGGAGCCCAGGGGACGATACGATCTCTGGGAATCTATTTTACAGGAGAAACCGAAGAGTAGCAGCTTaGCATAGACAGCATGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NGSPGDDTISGNLFYRRNRRVAA*HRQHVW Trigger: CCACACATGCTGTCTATGGCAAGCTGCTACTCTTCG...GTTTCTCCTGTAAAATAGATTCCCAGAGATCGTATCGTCCCCTGGGCTCCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CAA 72 bp | CCTGGGCACATCATGGAGGCTCTTCTTTGTATGCTCTaGGCTTCTCAAACAGCCTCAAGAAACACCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGHIMEALLCML*ASQTASRNTCE Trigger: TTCACAGGTGTTTCTTGAGGCTGTTTGAGAAGCCAAGAGCATACAAAGAAGAGCCTCCATGATGTGCCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CAA 72 bp | TCATCAATATCTCTTCTGCCTAGAGTGCCCCCTTCATaGCTTTTGGGTCAAGACTACCTCAGTTCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSISLLPRVPPS*LLGQDYLSSGP Trigger: AGGCCCTGAACTGAGGTAGTCTTGACCCAAAAGCAATGAAGGGGGCACTCTAGGCAGAAGAGATATTGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR GCA 90 bp | TGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACGACAGCATGTGTGGCTaGCATGAGCACAGCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: WAKGRQLYEMGVDSLDTYDSMCG*HEHSQH Trigger: ATGTTGGCTGTGCTCATGGCAGCCACACATGCTGTC...GTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR TCA 90 bp | CCTTACCTGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTGTGTCATTTGCTTTaGAGTAGCGATGCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PYLVLRSWAKGRQLYEMGVCHLL*SSDAQR Trigger: TCTTTGAGCATCGCTACTTCAAAGCAAATGACACAC...TCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAGGTAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR GCA 90 bp | TCTTTCCTTCTGAATTTAGTCAAAGCTAAACCAAGTCCCAGCTGTATACAGTGGAGATGGCAGAGCGTATaGCATCGGCTAGGCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFLLNLVKAKPSPSCIQWRWQSV*HRLGTG Trigger: ACCTGTGCCTAGCCGATGGCATACGCTCTGCCATCT...CCACTGTATACAGCTGGGACTTGGTTTAGCTTTGACTAAATTCAGAAGGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CAA 72 bp | CTTCATCTAGCCTGGGCACATCATGGAGGCTCTTCTTaGTATGCTCTTGGCTTCTCAAACAGCCTCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHLAWAHHGGSS*YALGFSNSLKK Trigger: TTTCTTGAGGCTGTTTGAGAAGCCAAGAGCATACAAAGAAGAGCCTCCATGATGTGCCCAGGCTAGATGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR TCA 90 bp | AAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACATACATCACATAAGCCGATGCTaGTGGCAGAGACAGTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGRQLYEMGVDSLDTYIHHISRC*WQRQCA Trigger: GGCGCACTGTCTCTGCCATCAGCATCGGCTTATGTG...ATGTATGTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR TCA 90 bp | TCTTTCCTTCTGAATTTAGTCAAAGCTAAACCAAGTCCCAGCTGTATACAGTGGGGCTTCATCTTGCGGTaGCGATACTCGAAGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFLLNLVKAKPSPSCIQWGFILR*RYSKSS Trigger: GCTACTCTTCGAGTATCGTCACCGCAAGATGAAGCC...CCACTGTATACAGCTGGGACTTGGTTTAGCTTTGACTAAATTCAGAAGGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR TCA 90 bp | TCTTTCCTTCTGAATTTAGTCAAAGCTAAACCAAGTCCCAGCTGTATACAGTGGATGTCCAGTTTTGGCTaGTGGCTGGCACCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLLNLVKAKPSPSCIQWMSSFG*WLAPSA Trigger: TGCAGATGGTGCCAGCCATCAGCCAAAACTGGACAT...CCACTGTATACAGCTGGGACTTGGTTTAGCTTTGACTAAATTCAGAAGGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACATACATCAGGTGGGAAAGCCATaGCCACAGACAAGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGRQLYEMGVDSLDTYIHQVGKP*PQTRSR Trigger: CCTGGACCTTGTCTGTGGCCATGGCTTTCCCACCTG...ATGTATGTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | TGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACTGCTCAAAGATGCACTaGTCCTCCTCTCGGATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WAKGRQLYEMGVDSLDTYCSKMH*SSSRIN Trigger: GTTTATCCGAGAGGAGGACCAGTGCATCTTTGAGCA...GTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACATACATGGGTTGACGGCAGCCTaGGCGAAGCTCATCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KGRQLYEMGVDSLDTYIHGLTAA*AKLIQT Trigger: TGTTTGGATGAGCTTCGCCCAGGCTGCCGTCAACCC...ATGTATGTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | TCTTTCCTTCTGAATTTAGTCAAAGCTAAACCAAGTCCCAGCTGTATACAGTGGCACATCAAAGACAGGTaGGAAAGCCATGGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFLLNLVKAKPSPSCIQWHIKDR*ESHGHR Trigger: TCTGTGGCCATGGCTTTCCCACCTGTCTTTGATGTG...CCACTGTATACAGCTGGGACTTGGTTTAGCTTTGACTAAATTCAGAAGGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACATACATAGCATGAAGGCCGCATaGAAGCAAAAGAGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGRQLYEMGVDSLDTYIHSMKAA*KQKSTA Trigger: GGCTGTGCTCTTTTGCTTCCATGCGGCCTTCATGCT...ATGTATGTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| 3UTR CAA 72 bp | GCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTaGACTCTCTTGACACATACATACATGAAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGPKEDNFMRWE*TLLTHTYMKNF Trigger: GAAATTTTTCATGTATGTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS CCA 90 bp | CCGCCGGCTAGCTGCATGCCCATTCTGCCGGATACCCAGCAGAGTTaGTGGCATGGGCCCACGGCCAAAACCAGCGATCCAGTTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPASCMPILPDTQQS*WHGPTAKTSDPVGS Trigger: GCTGCCAACTGGATCGCTGGTTTTGGCCGTGGGCCCATGCCACCAACTCTGCTGGGTATCCGGCAGAATGGGCATGCAGCTAGCCGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS GCA 90 bp | ACCTCGTCCATGCCCAGTAGCCGCCGGCTAGCTGCATGCCCATTCTaGCGGATACCCAGCAGAGTTGGTGGCATGGGCCCACGGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TSSMPSSRRLAACPF*RIPSRVGGMGPRPK Trigger: TTTTGGCCGTGGGCCCATGCCACCAACTCTGCTGGGTATCCGGCAGAATGGGCATGCAGCTAGCCGGCGGCTACTGGGCATGGACGAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS CCA 90 bp | CCGGCTAGCTGCATGCCCATTCTGCCGGATACCCAGCAGAGTTGGTaGCATGGGCCCACGGCCAAAACCAGCGATCCAGTTGGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PASCMPILPDTQQSW*HGPTAKTSDPVGSS Trigger: GCTGCTGCCAACTGGATCGCTGGTTTTGGCCGTGGGCCCATGCCACCAACTCTGCTGGGTATCCGGCAGAATGGGCATGCAGCTAGCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS TCA 90 bp | ACACATGATCAGTCCCAGCAGCACCAGCTTCACATAAGCCGATGCTaGTGGCAGAGACAGTGCGCCGCTCACCTCTTCGGGCTCTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: THDQSQQHQLHISRC*WQRQCAAHLFGLSG Trigger: ACCGGAGAGCCCGAAGAGGTGAGCGGCGCACTGTCTCTGCCATCAGCATCGGCTTATGTGAAGCTGGTGCTGCTGGGACTGATCATGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS GCA 90 bp | CAGGGCACGCTCCTTGAGCACCAGCAGGGACAAGATGGCATTGCCTaGCAGGCTTACACACATGATCAGTCCCAGCAGCACCAGCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: QGTLLEHQQGQDGIA*QAYTHDQSQQHQLH Trigger: GTGAAGCTGGTGCTGCTGGGACTGATCATGTGTGTAAGCCTGGCAGGCAATGCCATCTTGTCCCTGCTGGTGCTCAAGGAGCGTGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CAA 90 bp | AAACTTCTGGGAAGGATGTTTGGGGCCCAACCAAGGAGGAGCTCAAGGACTGTGTGCAGGGCACGCTCCTaGAGCACCAGCAGGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLLGRMFGAQPRRSSRTVCRARS*STSRDK Trigger: CTTGTCCCTGCTGGTGCTCAAGGAGCGTGCCCTGCA...CACAGTCCTTGAGCTCCTCCTTGGTTGGGCCCCAAACATCCTTCCCAGAAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CAA 90 bp | AAAGGAAACGGAGGAAAACCCTCCCGAGTTTACCCTATTTGCCCTCCCACCTTGGGATACCCAGCAGAGTaGGTGGCATGGGCCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: KGNGGKPSRVYPICPPTLGYPAE*VAWAHG Trigger: GCCGTGGGCCCATGCCACCAACTCTGCTGGGTATCC...CAAGGTGGGAGGGCAAATAGGGTAAACTCGGGAGGGTTTTCCTCCGTTTCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS CCA 90 bp | ATGAGGAGCCATGGCGCACAGAAGCCAGTACAAAGGGGAAGCAGATaGCAGAGCGTATGCCATCGGCTAGGCACAGGTCCAGCAGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: MRSHGAQKPVQRGSR*QSVCHRLGTGPAES Trigger: ACTTTCTGCTGGACCTGTGCCTAGCCGATGGCATACGCTCTGCCATCTGCTTCCCCTTTGTACTGGCTTCTGTGCGCCATGGCTCCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS TCA 90 bp | GCACCAGCAGGGACAAGATGGCATTGCCTGCCAGGCTTACACACATaGTCAGTCCCAGCAGCACCAGCTTCACATAAGCCGATGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: APAGTRWHCLPGLHT*SVPAAPASHKPMLM Trigger: CATCAGCATCGGCTTATGTGAAGCTGGTGCTGCTGGGACTGATCATGTGTGTAAGCCTGGCAGGCAATGCCATCTTGTCCCTGCTGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS CCA 90 bp | GCCACAATCTTACAGCTGAGTGCACTGAAGGTCCATGAGGAGCCATaGCGCACAGAAGCCAGTACAAAGGGGAAGCAGATGGCAGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ATILQLSALKVHEEP*RTEASTKGKQMAER Trigger: ACGCTCTGCCATCTGCTTCCCCTTTGTACTGGCTTCTGTGCGCCATGGCTCCTCATGGACCTTCAGTGCACTCAGCTGTAAGATTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CAA 90 bp | CTGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACAAACCAGCGATCCAGTaGGCAGCAGCCTGGCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LVLRSWAKGRQLYEMGVDKPAIQ*AAAWPV Trigger: TACCGGCCAGGCTGCTGCCAACTGGATCGCTGGTTT...GTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS-3UTR CAA 90 bp | CCTTACCTGGTGCTCAGAAGCTGGGCCAAAGGAAGACAACTTTATGAGATGGGAAAGCAGACGATTGGGTaGACGGCAGCCTGGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PYLVLRSWAKGRQLYEMGKQTIG*TAAWAK Trigger: CTTCGCCCAGGCTGCCGTCAACCCAATCGTCTGCTT...TCCCATCTCATAAAGTTGTCTTCCTTTGGCCCAGCTTCTGAGCACCAGGTAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
||
| CDS TCA 90 bp | AGCCATAAAGGCCACAATCTTACAGCTGAGTGCACTGAAGGTCCATaGGGAGCCATGGCGCACAGAAGCCAGTACAAAGGGGAAGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SHKGHNLTAECTEGP*GAMAHRSQYKGEAD Trigger: ATCTGCTTCCCCTTTGTACTGGCTTCTGTGCGCCATGGCTCCTCATGGACCTTCAGTGCACTCAGCTGTAAGATTGTGGCCTTTATGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS GCA 90 bp | TGCCATGAGCACAGCCAACATAAGCATAAAGCCCAGTGTGTCATTTaGTTTGAAGTAGCGATGCTCAAAGATGCACTGGTCCTCCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: CHEHSQHKHKAQCVI*FEVAMLKDALVLLS Trigger: CGAGAGGAGGACCAGTGCATCTTTGAGCATCGCTACTTCAAAGCAAATGACACACTGGGCTTTATGCTTATGTTGGCTGTGCTCATGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS-3UTR CAA 90 bp | TGGGCCAAAGGAAGACAACTTTATGAGATGGGAGTTGACTCTCTTGACACATACAGGGACAAGATGGCATaGCCTGCCAGGCTTACACAC | + |
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Preference number: 5 (lower is better) Translates to: WAKGRQLYEMGVDSLDTYRDKMA*PARLTH Trigger: GTGTGTAAGCCTGGCAGGCAATGCCATCTTGTCCCT...GTATGTGTCAAGAGAGTCAACTCCCATCTCATAAAGTTGTCTTCCTTTGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS GCA 72 bp | ATGCCCAGTAGCCGCCGGCTAGCTGCATGCCCATTCTaGCGGATACCCAGCAGAGTTGGTGGCATGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: MPSSRRLAACPF*RIPSRVGGMGP Trigger: TGGGCCCATGCCACCAACTCTGCTGGGTATCCGGCAGAATGGGCATGCAGCTAGCCGGCGGCTACTGGGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS GCA 72 bp | ACCTCGTCCATGCCCAGTAGCCGCCGGCTAGCTGCATaGCCATTCTGCCGGATACCCAGCAGAGTTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: TSSMPSSRRLAA*PFCRIPSRVGG Trigger: GCCACCAACTCTGCTGGGTATCCGGCAGAATGGGCATGCAGCTAGCCGGCGGCTACTGGGCATGGACGAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS GCA 72 bp | CACAGTAGGGTTCTCTGGGAGCTGGGGCACCTCCTGTaGCCCAGCAAGGGGCATGAGTCCTCAGGCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: HSRVLWELGHLL*PSKGHESSGTS Trigger: AGAAGTGCCTGAGGACTCATGCCCCTTGCTGGGGCACAGGAGGTGCCCCAGCTCCCAGAGAACCCTACTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS CCA 72 bp | CCACGGCCAAAACCAGCGATCCAGTTGGCAGCAGCCTaGCCGGTAGCCCCAGGGCCATGGAATGTCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: PRPKPAIQLAAA*PVAPGPWNVQF Trigger: AAACTGGACATTCCATGGCCCTGGGGCTACCGGCCAGGCTGCTGCCAACTGGATCGCTGGTTTTGGCCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS CCA 72 bp | GCCCATTCTGCCGGATACCCAGCAGAGTTGGTGGCATaGGCCCACGGCCAAAACCAGCGATCCAGTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: AHSAGYPAELVA*AHGQNQRSSWQ Trigger: CTGCCAACTGGATCGCTGGTTTTGGCCGTGGGCCCATGCCACCAACTCTGCTGGGTATCCGGCAGAATGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS TCA 72 bp | CAGTCCCAGCAGCACCAGCTTCACATAAGCCGATGCTaGTGGCAGAGACAGTGCGCCGCTCACCTCTTCGGG | + |
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Preference number: 6 (lower is better) Translates to: QSQQHQLHISRC*WQRQCAAHLFG Trigger: CCCGAAGAGGTGAGCGGCGCACTGTCTCTGCCATCAGCATCGGCTTATGTGAAGCTGGTGCTGCTGGGACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS CCA 72 bp | AGCTGCATGCCCATTCTGCCGGATACCCAGCAGAGTTaGTGGCATGGGCCCACGGCCAAAACCAGCGATCCA | + |
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Preference number: 6 (lower is better) Translates to: SCMPILPDTQQS*WHGPTAKTSDP Trigger: TGGATCGCTGGTTTTGGCCGTGGGCCCATGCCACCAACTCTGCTGGGTATCCGGCAGAATGGGCATGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS CCA 72 bp | TGCATGCCCATTCTGCCGGATACCCAGCAGAGTTGGTaGCATGGGCCCACGGCCAAAACCAGCGATCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: CMPILPDTQQSW*HGPTAKTSDPV Trigger: AACTGGATCGCTGGTTTTGGCCGTGGGCCCATGCCACCAACTCTGCTGGGTATCCGGCAGAATGGGCATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS CAA 90 bp | TTGTGCAGGGCACGCTCCTTGAGCACCAGCAGGGACAAGATGGCATaGCCTGCCAGGCTTACACACATGATCAGTCCCAGCAGCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: LCRARSLSTSRDKMA*PARLTHMISPSSTS Trigger: GCTGGTGCTGCTGGGACTGATCATGTGTGTAAGCCTGGCAGGCAATGCCATCTTGTCCCTGCTGGTGCTCAAGGAGCGTGCCCTGCACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS CAA 72 bp | GCACGCTCCTTGAGCACCAGCAGGGACAAGATGGCATaGCCTGCCAGGCTTACACACATGATCAGTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: ARSLSTSRDKMA*PARLTHMISPS Trigger: GCTGGGACTGATCATGTGTGTAAGCCTGGCAGGCAATGCCATCTTGTCCCTGCTGGTGCTCAAGGAGCGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS TCA 72 bp | GAAAGTAGTAAGGAGCCTTGTGCAGGGCACGCTCCTTaGGCACCAGCAGGGACAAGATGGCATTGCCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: ESSKEPCAGHAP*APAGTRWHCLP Trigger: TGGCAGGCAATGCCATCTTGTCCCTGCTGGTGCTCAAGGAGCGTGCCCTGCACAAGGCTCCTTACTACTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS GCA 72 bp | CTCCTTGAGCACCAGCAGGGACAAGATGGCATTGCCTaGCAGGCTTACACACATGATCAGTCCCAGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LLEHQQGQDGIA*QAYTHDQSQQH Trigger: GTGCTGCTGGGACTGATCATGTGTGTAAGCCTGGCAGGCAATGCCATCTTGTCCCTGCTGGTGCTCAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS TCA 72 bp | GGGACAAGATGGCATTGCCTGCCAGGCTTACACACATaGTCAGTCCCAGCAGCACCAGCTTCACATAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: GTRWHCLPGLHT*SVPAAPASHKP Trigger: CGGCTTATGTGAAGCTGGTGCTGCTGGGACTGATCATGTGTGTAAGCCTGGCAGGCAATGCCATCTTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS TCA 72 bp | GGCCACAATCTTACAGCTGAGTGCACTGAAGGTCCATaGGGAGCCATGGCGCACAGAAGCCAGTACAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: GHNLTAECTEGP*GAMAHRSQYKG Trigger: CCCTTTGTACTGGCTTCTGTGCGCCATGGCTCCTCATGGACCTTCAGTGCACTCAGCTGTAAGATTGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS CAA 72 bp | TTGAGGTCCTTGTTAAGCAGGAAGCAGACGATTGGGTaGACGGCAGCCTGGGCGAAGCTCATCCAAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: LRSLLSRKQTIG*TAAWAKLIQTA Trigger: TGCTGTTTGGATGAGCTTCGCCCAGGCTGCCGTCAACCCAATCGTCTGCTTCCTGCTTAACAAGGACCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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| CDS GCA 72 bp | CACAGCCAACATAAGCATAAAGCCCAGTGTGTCATTTaGTTTGAAGTAGCGATGCTCAAAGATGCACTGGTC | + |
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Preference number: 6 (lower is better) Translates to: HSQHKHKAQCVI*FEVAMLKDALV Trigger: GACCAGTGCATCTTTGAGCATCGCTACTTCAAAGCAAATGACACACTGGGCTTTATGCTTATGTTGGCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070316.12 |
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