Pregenerated sensors for GPR171 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050075Ensembl transcript IDs: ENSMUST00000085040.5
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCTGTGAGAGTGCAGGGTTGGCTTGGATTGAAGAAAGGACTTTCTaGATGAACCAGTCCCGTTTGCTAGCTATTGGTGGCTCTTATTCC | + |
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Preference number: 1 (lower is better) Translates to: ICESAGLAWIEERTF*MNQSRLLAIGGSYS Trigger: GGAATAAGAGCCACCAATAGCTAGCAAACGGGACTGGTTCATGCAGAAAGTCCTTTCTTCAATCCAAGCCAACCCTGCACTCTCACAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| 3UTR TCA 90 bp | ATTTTCATCCAGAAAGTAAATGTTCCAGAAATTGAAGTGAATTTCTaGGTCTTTGCCATGGCTGTCCTCCCCACTTTGATCATTCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: IFIQKVNVPEIEVNF*VFAMAVLPTLIIPV Trigger: AACTGGAATGATCAAAGTGGGGAGGACAGCCATGGCAAAGACTCAGAAATTCACTTCAATTTCTGGAACATTTACTTTCTGGATGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| 3UTR TCA 90 bp | GATTATTTGATATATTTTCATCCAGAAAGTAAATGTTCCAGAAATTaGAGTGAATTTCTGAGTCTTTGCCATGGCTGTCCTCCCCACTTT | + |
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Preference number: 1 (lower is better) Translates to: DYLIYFHPESKCSRN*SEFLSLCHGCPPHF Trigger: AAAGTGGGGAGGACAGCCATGGCAAAGACTCAGAAATTCACTTCAATTTCTGGAACATTTACTTTCTGGATGAAAATATATCAAATAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| 3UTR TCA 90 bp | GATGCTTTTATTTTTCTAGGTCACAGAAGACCTTTAAGGTATCGCTaGAGGGCTTCCTGGCAACTTAGATGTAGATTATTTGATATATTT | + |
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Preference number: 1 (lower is better) Translates to: DAFIFLGHRRPLRYR*RASWQLRCRLFDIF Trigger: AAATATATCAAATAATCTACATCTAAGTTGCCAGGAAGCCCTTCAGCGATACCTTAAAGGTCTTCTGTGACCTAGAAAAATAAAAGCATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| 3UTR-3UTR GCA 90 bp | CCTCAAACTCATAATCTTTCTGCCTCAGCCCCCAGGGTGCTGGAATTAACCAGTGAAGAAAGGACTTTCTaGATGAACCAGTCCCGTTTG | + |
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Preference number: 2 (lower is better) Translates to: PQTHNLSASAPRVLELTSEERTF*MNQSRL Trigger: CAAACGGGACTGGTTCATGCAGAAAGTCCTTTCTTC...ACTGGTTAATTCCAGCACCCTGGGGGCTGAGGCAGAAAGATTATGAGTTTGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| 3UTR-3UTR TCA 90 bp | CCTCAAACTCATAATCTTTCTGCCTCAGCCCCCAGGGTGCTGGAATTAACCAGTTTCCAGAAATTGAAGTaGATTTCTGAGTCTTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: PQTHNLSASAPRVLELTSFQKLK*ISESLP Trigger: TGGCAAAGACTCAGAAATTCACTTCAATTTCTGGAA...ACTGGTTAATTCCAGCACCCTGGGGGCTGAGGCAGAAAGATTATGAGTTTGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGCTTCCTGGCAACTTAGATGTAGATTATTTGATATATTTTCATCCAGAAAGTGCAGGGTTGGCTTaGATTGAAGAAAGGACTTTC | + |
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Preference number: 2 (lower is better) Translates to: EGLPGNLDVDYLIYFHPESAGLA*IEERTF Trigger: GAAAGTCCTTTCTTCAATCCAAGCCAACCCTGCACT...TTCTGGATGAAAATATATCAAATAATCTACATCTAAGTTGCCAGGAAGCCCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGCTTCCTGGCAACTTAGATGTAGATTATTTGATATATTTTCATCCAGAATTTGCTAGCTATTGGTaGCTCTTATTCCTAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: EGLPGNLDVDYLIYFHPEFASYW*LLFLSI Trigger: GATGCTTAGGAATAAGAGCCACCAATAGCTAGCAAA...TTCTGGATGAAAATATATCAAATAATCTACATCTAAGTTGCCAGGAAGCCCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| 3UTR-3UTR CAA 90 bp | CCTCAAACTCATAATCTTTCTGCCTCAGCCCCCAGGGTGCTGGAATTAACCAGTTCATTCCAGTTGACCTaGGTTCAATGTGCTTTGTTA | + |
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Preference number: 3 (lower is better) Translates to: PQTHNLSASAPRVLELTSSFQLT*VQCALL Trigger: TAACAAAGCACATTGAACCAAGGTCAACTGGAATGA...ACTGGTTAATTCCAGCACCCTGGGGGCTGAGGCAGAAAGATTATGAGTTTGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| 3UTR TCA 72 bp | ATTTCTGAGTCTTTGCCATGGCTGTCCTCCCCACTTTaGTCATTCCAGTTGACCTTGGTTCAATGTGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: ISESLPWLSSPL*SFQLTLVQCAL Trigger: CAAAGCACATTGAACCAAGGTCAACTGGAATGATCAAAGTGGGGAGGACAGCCATGGCAAAGACTCAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| 3UTR CCA 72 bp | TTTCTGCATGAACCAGTCCCGTTTGCTAGCTATTGGTaGCTCTTATTCCTAAGCATCTTCTTCTATCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: FLHEPVPFASYW*LLFLSIFFYLS Trigger: GCTGAGATAGAAGAAGATGCTTAGGAATAAGAGCCACCAATAGCTAGCAAACGGGACTGGTTCATGCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| 3UTR CCA 72 bp | GACTTTCTGCATGAACCAGTCCCGTTTGCTAGCTATTaGTGGCTCTTATTCCTAAGCATCTTCTTCTATCTC | + |
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Preference number: 3 (lower is better) Translates to: DFLHEPVPFASY*WLLFLSIFFYL Trigger: GAGATAGAAGAAGATGCTTAGGAATAAGAGCCACCAATAGCTAGCAAACGGGACTGGTTCATGCAGAAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR TCA 90 bp | CCTCAAACTCATAATCTTTCTGCCTCAGCCCCCAGGGTGCTGGAATTAACCAGTGGGTGTATGGGATCCTaGCAGCGTGGTAGGGAACAA | + |
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Preference number: 4 (lower is better) Translates to: PQTHNLSASAPRVLELTSGCMGS*QRGREQ Trigger: TTGTTCCCTACCACGCTGTCAGGATCCCATACACCC...ACTGGTTAATTCCAGCACCCTGGGGGCTGAGGCAGAAAGATTATGAGTTTGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR CCA 90 bp | GCCATGGCTGTCCTCCCCACTTTGATCATTCCAGTTGACCTTGGTTCAATGTGCAGGCAGGCTGTCACTTaGCAGTGGAATATCCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: AMAVLPTLIIPVDLGSMCRQAVT*QWNILS Trigger: GCTAAGGATATTCCACTGCCAAGTGACAGCCTGCCT...GCACATTGAACCAAGGTCAACTGGAATGATCAAAGTGGGGAGGACAGCCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR CCA 90 bp | GCCATGGCTGTCCTCCCCACTTTGATCATTCCAGTTGACCTTGGTTCAATGTGCGCTGTCACTTGGCAGTaGAATATCCTTAGCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: AMAVLPTLIIPVDLGSMCAVTWQ*NILSFQ Trigger: CTGGAAGCTAAGGATATTCCACTGCCAAGTGACAGC...GCACATTGAACCAAGGTCAACTGGAATGATCAAAGTGGGGAGGACAGCCATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR TCA 90 bp | AGAAAGGACTTTCTGCATGAACCAGTCCCGTTTGCTAGCTATTGGTGGCTCTTAGAGCCACACGACAGCTaGTATCATTTTGGCAAACCC | + |
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Preference number: 4 (lower is better) Translates to: RKDFLHEPVPFASYWWLLEPHDS*YHFGKP Trigger: GGGTTTGCCAAAATGATATCAGCTGTCGTGTGGCTC...TAAGAGCCACCAATAGCTAGCAAACGGGACTGGTTCATGCAGAAAGTCCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR TCA 90 bp | CCTCAAACTCATAATCTTTCTGCCTCAGCCCCCAGGGTGCTGGAATTAACCAGTAATGTGGAGCAGAGCTaGTTTCACACTTGGATAGTT | + |
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Preference number: 4 (lower is better) Translates to: PQTHNLSASAPRVLELTSNVEQS*FHTWIV Trigger: AACTATCCAAGTGTGAAATCAGCTCTGCTCCACATT...ACTGGTTAATTCCAGCACCCTGGGGGCTGAGGCAGAAAGATTATGAGTTTGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR TCA 90 bp | GACTTTCTGCATGAACCAGTCCCGTTTGCTAGCTATTGGTGGCTCTTATTCCTACACCCAAGTCAACAATaGTTTTTACTGGTAATGCCA | + |
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Preference number: 4 (lower is better) Translates to: DFLHEPVPFASYWWLLFLHPSQQ*FLLVMP Trigger: TGGCATTACCAGTAAAAATCATTGTTGACTTGGGTG...TAGGAATAAGAGCCACCAATAGCTAGCAAACGGGACTGGTTCATGCAGAAAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR CCA 90 bp | GACTTTCTGCATGAACCAGTCCCGTTTGCTAGCTATTGGTGGCTCTTATTCCTACAGCTGATATCATTTTaGCAAACCCAGGTTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: DFLHEPVPFASYWWLLFLQLISF*QTQVLV Trigger: TACAAGAACCTGGGTTTGCCAAAATGATATCAGCTG...TAGGAATAAGAGCCACCAATAGCTAGCAAACGGGACTGGTTCATGCAGAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| 3UTR CAA 72 bp | CTTGTACTTTGTACTGCAGATTCATTCTGGTTGGCCTaGTCTCTAGATCTGAGAGTCACCCATGTTTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: LVLCTADSFWLA*SLDLRVTHVSR Trigger: TCTAGAAACATGGGTGACTCTCAGATCTAGAGACAAGGCCAACCAGAATGAATCTGCAGTACAAAGTACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR TCA 90 bp | AAGGACTTTCTGCATGAACCAGTCCCGTTTGCTAGCTATTGGTGGCTCTTATTCCATGCAACCTACATTTaGCTTTTCTTTGATGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: KDFLHEPVPFASYWWLLFHATYI*LFFDVL Trigger: AAGGACATCAAAGAAAAGTCAAATGTAGGTTGCATG...GAATAAGAGCCACCAATAGCTAGCAAACGGGACTGGTTCATGCAGAAAGTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR TCA 90 bp | TCATTCCAGTTGACCTTGGTTCAATGTGCTTTGTTAGGTAAAGAATGTCAGCATATGCTGACACATCTGTaGTTTGTGGTTTTCTGTATA | + |
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Preference number: 4 (lower is better) Translates to: SFQLTLVQCALLGKECQHMLTHL*FVVFCI Trigger: TATACAGAAAACCACAAATCACAGATGTGTCAGCAT...ATGCTGACATTCTTTACCTAACAAAGCACATTGAACCAAGGTCAACTGGAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR TCA 90 bp | GAAGGGCTTCCTGGCAACTTAGATGTAGATTATTTGATATATTTTCATCCAGAAATATTGCCACACAGATaGAGTTTGTTAGCAAATGCC | + |
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Preference number: 4 (lower is better) Translates to: EGLPGNLDVDYLIYFHPEILPHR*SLLANA Trigger: GGCATTTGCTAACAAACTTCATCTGTGTGGCAATAT...TTCTGGATGAAAATATATCAAATAATCTACATCTAAGTTGCCAGGAAGCCCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR GCA 90 bp | TCATTCCAGTTGACCTTGGTTCAATGTGCTTTGTTAGGTAAAGAATGTCAGCATATAGAGTTGTCTGATTaGAAGGAAGTTGGATATCAA | + |
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Preference number: 4 (lower is better) Translates to: SFQLTLVQCALLGKECQHIELSD*KEVGYQ Trigger: TTGATATCCAACTTCCTTGCAATCAGACAACTCTAT...ATGCTGACATTCTTTACCTAACAAAGCACATTGAACCAAGGTCAACTGGAATGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR CAA 90 bp | GCCATGGCTGTCCTCCCCACTTTGATCATTCCAGTTGACCTTGGTTCAATGTGCAGCAGTGTGGCCTCTTaGGCTTTGAAGAGTGCGATC | + |
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Preference number: 5 (lower is better) Translates to: AMAVLPTLIIPVDLGSMCSSVAS*ALKSAI Trigger: GATCGCACTCTTCAAAGCCAAAGAGGCCACACTGCT...GCACATTGAACCAAGGTCAACTGGAATGATCAAAGTGGGGAGGACAGCCATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS TCA 90 bp | CAGCAGCAGTGTGGCCTCTTTGGCTTTGAAGAGTGCGATCCTAGTTaGGCAATCAGATATGACCTCTGTCTGGCTGAGGGTGTATGGGAT | + |
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Preference number: 5 (lower is better) Translates to: QQQCGLFGFEECDPS*AIRYDLCLAEGVWD Trigger: ATCCCATACACCCTCAGCCAGACAGAGGTCATATCTGATTGCTCAACTAGGATCGCACTCTTCAAAGCCAAAGAGGCCACACTGCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR CAA 90 bp | GCCATGGCTGTCCTCCCCACTTTGATCATTCCAGTTGACCTTGGTTCAATGTGCACAGCTGATATCATTTaGGCAAACCCAGGTTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: AMAVLPTLIIPVDLGSMCTADII*ANPGSC Trigger: ACAAGAACCTGGGTTTGCCAAAATGATATCAGCTGT...GCACATTGAACCAAGGTCAACTGGAATGATCAAAGTGGGGAGGACAGCCATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS TCA 90 bp | CATGTTCGGCACCATGATCAGCAGGACCATGAGCCACACGACAGCTaGTATCATTTTGGCAAACCCAGGTTCTTGTATTCGGTATATCTT | + |
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Preference number: 5 (lower is better) Translates to: HVRHHDQQDHEPHDS*YHFGKPRFLYSVYL Trigger: AAGATATACCGAATACAAGAACCTGGGTTTGCCAAAATGATATCAGCTGTCGTGTGGCTCATGGTCCTGCTGATCATGGTGCCGAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR CAA 90 bp | GCCATGGCTGTCCTCCCCACTTTGATCATTCCAGTTGACCTTGGTTCAATGTGCACATTTGACTTTTCTTaGATGTCCTTGATGGGAATC | + |
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Preference number: 5 (lower is better) Translates to: AMAVLPTLIIPVDLGSMCTFDFS*MSLMGI Trigger: GATTCCCATCAAGGACATCAAAGAAAAGTCAAATGT...GCACATTGAACCAAGGTCAACTGGAATGATCAAAGTGGGGAGGACAGCCATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR CAA 90 bp | AGAAAGGACTTTCTGCATGAACCAGTCCCGTTTGCTAGCTATTGGTGGCTCTTATTTTCTTTGATGTCCTaGATGGGAATCACCATGTTC | + |
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Preference number: 5 (lower is better) Translates to: RKDFLHEPVPFASYWWLLFSLMS*MGITMF Trigger: GAACATGGTGATTCCCATCAAGGACATCAAAGAAAA...TAAGAGCCACCAATAGCTAGCAAACGGGACTGGTTCATGCAGAAAGTCCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR CAA 90 bp | TCATTCCAGTTGACCTTGGTTCAATGTGCTTTGTTAGGTAAAGAATGTCAGCATCTTTCTTCCAGAGGCTaGCTCTTTTTAGGTGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: SFQLTLVQCALLGKECQHLSSRG*LFLGEA Trigger: CGCCTCACCTAAAAAGAGCAAGCCTCTGGAAGAAAG...ATGCTGACATTCTTTACCTAACAAAGCACATTGAACCAAGGTCAACTGGAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR CAA 90 bp | AAGGACTTTCTGCATGAACCAGTCCCGTTTGCTAGCTATTGGTGGCTCTTATTCCTGATTGCAAGGAAGTaGGATATCAAAATGATGACT | + |
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Preference number: 5 (lower is better) Translates to: KDFLHEPVPFASYWWLLFLIARK*DIKMMT Trigger: AGTCATCATTTTGATATCCAACTTCCTTGCAATCAG...GAATAAGAGCCACCAATAGCTAGCAAACGGGACTGGTTCATGCAGAAAGTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS-3UTR CAA 90 bp | GAAGGGCTTCCTGGCAACTTAGATGTAGATTATTTGATATATTTTCATCCAGAAGTGGCCTCTTTGGCTTaGAAGAGTGCGATCCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: EGLPGNLDVDYLIYFHPEVASLA*KSAILV Trigger: AACTAGGATCGCACTCTTCAAAGCCAAAGAGGCCAC...TTCTGGATGAAAATATATCAAATAATCTACATCTAAGTTGCCAGGAAGCCCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS TCA 90 bp | AACCCAGGTTCTTGTATTCGGTATATCTTGCAGCTGTGTATTAACTaGAGACAGCGATCGATGCTGACAAAGGCTAAGAAGATAATAGAT | + |
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Preference number: 5 (lower is better) Translates to: NPGSCIRYILQLCIN*RQRSMLTKAKKIID Trigger: ATCTATTATCTTCTTAGCCTTTGTCAGCATCGATCGCTGTCTTCAGTTAATACACAGCTGCAAGATATACCGAATACAAGAACCTGGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS TCA 90 bp | GCATATGATGTAACTAGCTGTCACCAAGAGAATGTGGAGCAGAGCTaGTTTCACACTTGGATAGTTTGTGTTGTCTCTATTTCTATAGAG | + |
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Preference number: 5 (lower is better) Translates to: AYDVTSCHQENVEQS*FHTWIVCVVSISIE Trigger: CTCTATAGAAATAGAGACAACACAAACTATCCAAGTGTGAAATCAGCTCTGCTCCACATTCTCTTGGTGACAGCTAGTTACATCATATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS CCA 72 bp | GCAATCAGATATGACCTCTGTCTGGCTGAGGGTGTATaGGATCCTGACAGCGTGGTAGGGAACAAAGCATAT | + |
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Preference number: 6 (lower is better) Translates to: AIRYDLCLAEGV*DPDSVVGNKAY Trigger: ATATGCTTTGTTCCCTACCACGCTGTCAGGATCCCATACACCCTCAGCCAGACAGAGGTCATATCTGATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS CAA 72 bp | TTAGACACCGCCAGCAGCAGTGTGGCCTCTTTGGCTTaGAAGAGTGCGATCCTAGTTGAGCAATCAGATATG | + |
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Preference number: 6 (lower is better) Translates to: LDTASSSVASLA*KSAILVEQSDM Trigger: CATATCTGATTGCTCAACTAGGATCGCACTCTTCAAAGCCAAAGAGGCCACACTGCTGCTGGCGGTGTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS CAA 72 bp | CACAAATTAGACACCGCCAGCAGCAGTGTGGCCTCTTaGGCTTTGAAGAGTGCGATCCTAGTTGAGCAATCA | + |
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Preference number: 6 (lower is better) Translates to: HKLDTASSSVAS*ALKSAILVEQS Trigger: TGATTGCTCAACTAGGATCGCACTCTTCAAAGCCAAAGAGGCCACACTGCTGCTGGCGGTGTCTAATTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS TCA 72 bp | CACCATGATCAGCAGGACCATGAGCCACACGACAGCTaGTATCATTTTGGCAAACCCAGGTTCTTGTATTCG | + |
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Preference number: 6 (lower is better) Translates to: HHDQQDHEPHDS*YHFGKPRFLYS Trigger: CGAATACAAGAACCTGGGTTTGCCAAAATGATATCAGCTGTCGTGTGGCTCATGGTCCTGCTGATCATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS CAA 90 bp | AAACACAAATTAGACACCGCCAGCAGCAGTGTGGCCTCTTTGGCTTaGAAGAGTGCGATCCTAGTTGAGCAATCAGATATGACCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: KHKLDTASSSVASLA*KSAILVEQSDMTSV Trigger: GACAGAGGTCATATCTGATTGCTCAACTAGGATCGCACTCTTCAAAGCCAAAGAGGCCACACTGCTGCTGGCGGTGTCTAATTTGTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS CAA 90 bp | GGATCAAAACACAAATTAGACACCGCCAGCAGCAGTGTGGCCTCTTaGGCTTTGAAGAGTGCGATCCTAGTTGAGCAATCAGATATGACC | + |
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Preference number: 6 (lower is better) Translates to: GSKHKLDTASSSVAS*ALKSAILVEQSDMT Trigger: GGTCATATCTGATTGCTCAACTAGGATCGCACTCTTCAAAGCCAAAGAGGCCACACTGCTGCTGGCGGTGTCTAATTTGTGTTTTGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS CAA 90 bp | ACCATGATCAGCAGGACCATGAGCCACACGACAGCTGATATCATTTaGGCAAACCCAGGTTCTTGTATTCGGTATATCTTGCAGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: TMISRTMSHTTADII*ANPGSCIRYILQLC Trigger: ACACAGCTGCAAGATATACCGAATACAAGAACCTGGGTTTGCCAAAATGATATCAGCTGTCGTGTGGCTCATGGTCCTGCTGATCATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS CAA 72 bp | AGCAGGACCATGAGCCACACGACAGCTGATATCATTTaGGCAAACCCAGGTTCTTGTATTCGGTATATCTTG | + |
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Preference number: 6 (lower is better) Translates to: SRTMSHTTADII*ANPGSCIRYIL Trigger: CAAGATATACCGAATACAAGAACCTGGGTTTGCCAAAATGATATCAGCTGTCGTGTGGCTCATGGTCCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS GCA 72 bp | TTTTGGCAAACCCAGGTTCTTGTATTCGGTATATCTTaGAGCTGTGTATTAACTGAAGACAGCGATCGATGC | + |
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Preference number: 6 (lower is better) Translates to: FWQTQVLVFGIS*SCVLTEDSDRC Trigger: GCATCGATCGCTGTCTTCAGTTAATACACAGCTGCAAGATATACCGAATACAAGAACCTGGGTTTGCCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS CAA 90 bp | TTTTTAAACTCCATGCAACCTACATTTGACTTTTCTTTGATGTCCTaGATGGGAATCACCATGTTCGGCACCATGATCAGCAGGACCATG | + |
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Preference number: 6 (lower is better) Translates to: FLNSMQPTFDFSLMS*MGITMFGTMISRTM Trigger: CATGGTCCTGCTGATCATGGTGCCGAACATGGTGATTCCCATCAAGGACATCAAAGAAAAGTCAAATGTAGGTTGCATGGAGTTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS TCA 72 bp | TCTTGTATTCGGTATATCTTGCAGCTGTGTATTAACTaGAGACAGCGATCGATGCTGACAAAGGCTAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SCIRYILQLCIN*RQRSMLTKAKK Trigger: CTTCTTAGCCTTTGTCAGCATCGATCGCTGTCTTCAGTTAATACACAGCTGCAAGATATACCGAATACAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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| CDS TCA 72 bp | TCCAAACTCCTTTTTAAACTCCATGCAACCTACATTTaGCTTTTCTTTGATGTCCTTGATGGGAATCACCAT | + |
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Preference number: 6 (lower is better) Translates to: SKLLFKLHATYI*LFFDVLDGNHH Trigger: ATGGTGATTCCCATCAAGGACATCAAAGAAAAGTCAAATGTAGGTTGCATGGAGTTTAAAAAGGAGTTTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085040.5 |
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