Pregenerated sensors for GPR17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052229Ensembl transcript IDs: ENSMUST00000064016.6
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGGCCAACCCAGTCCTGTGGAGGGGTGGGCAGGGCATCCCTGTaGTTAGTCCTGCCTCTTGATGGATTCGCTGAGACTGGATGGCCT | + |
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Preference number: 1 (lower is better) Translates to: ARPTQSCGGVGRASL*LVLPLDGFAETGWP Trigger: AGGCCATCCAGTCTCAGCGAATCCATCAAGAGGCAGGACTAACCACAGGGATGCCCTGCCCACCCCTCCACAGGACTGGGTTGGCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CCA 90 bp | CCGAAGCCCTCCCCAGCACAGCTTCTCAACGACTCAGGTCAAGCCTaGGTATCACCAGGTCCTCCCCTTGACCTCCGAGTGCCCTCACAG | + |
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Preference number: 1 (lower is better) Translates to: PKPSPAQLLNDSGQA*VSPGPPLDLRVPSQ Trigger: CTGTGAGGGCACTCGGAGGTCAAGGGGAGGACCTGGTGATACCCAGGCTTGACCTGAGTCGTTGAGAAGCTGTGCTGGGGAGGGCTTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CCA 90 bp | ACCACATGCTGGCACATTCAACAGCTCAGAGCCAGGCAGCCAGGGTaGCAGAAGCCTCTTGGGAGGGAGTGGGGCTCAGGATGTCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: TTCWHIQQLRARQPG*QKPLGREWGSGCPF Trigger: GAAGGGACATCCTGAGCCCCACTCCCTCCCAAGAGGCTTCTGCCACCCTGGCTGCCTGGCTCTGAGCTGTTGAATGTGCCAGCATGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 90 bp | TCTCAACGACTCAGGTCAAGCCTGGGTATCACCAGGTCCTCCCCTTaGCCTCCGAGTGCCCTCACAGCAGAGCCCTCCTCTTTCAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: SQRLRSSLGITRSSP*PPSALTAEPSSFSE Trigger: CTCACTGAAAGAGGAGGGCTCTGCTGTGAGGGCACTCGGAGGTCAAGGGGAGGACCTGGTGATACCCAGGCTTGACCTGAGTCGTTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CCA 90 bp | ACTTGGACAAGGGTGGACCCGGAAGAACACTGGTTACAAAGACCGTaGGAGCTGAAGGGTGGGGTGTGCGCCCTGACAGCTGAGGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: TWTRVDPEEHWLQRP*ELKGGVCALTAEVS Trigger: AGAGACCTCAGCTGTCAGGGCGCACACCCCACCCTTCAGCTCCCACGGTCTTTGTAACCAGTGTTCTTCCGGGTCCACCCTTGTCCAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 90 bp | TCCGCTGTGAATTGTGTGATGTGGAGCTGGCTGACCTGGGCTTTGTaGAGAACGCAGGCAGGTGAGCCAGCTGCAGTCATGGGCAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: SAVNCVMWSWLTWAL*RTQAGEPAAVMGRE Trigger: CTCTCTGCCCATGACTGCAGCTGGCTCACCTGCCTGCGTTCTTCACAAAGCCCAGGTCAGCCAGCTCCACATCACACAATTCACAGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 90 bp | ATCCCAATTACTCATGACATCCCACCCACCACTGCTGCACCACGCTaGCCCCATCTGTCTGCCTTCCTCCCAGCATTCACATGGCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: IPITHDIPPTTAAPR*PHLSAFLPAFTWLD Trigger: GTCCAGCCATGTGAATGCTGGGAGGAAGGCAGACAGATGGGGTCAGCGTGGTGCAGCAGTGGTGGGTGGGATGTCATGAGTAATTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR GCA 90 bp | TCCGGCGCATCCTGCCTCCATCCTCCGGTGCTGAGGTTACAGATGTaGACTGCTGTACCCTATTCACACAGTTCTGTGAACCCAACCAGG | + |
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Preference number: 1 (lower is better) Translates to: SGASCLHPPVLRLQM*TAVPYSHSSVNPTR Trigger: CCTGGTTGGGTTCACAGAACTGTGTGAATAGGGTACAGCAGTGCACATCTGTAACCTCAGCACCGGAGGATGGAGGCAGGATGCGCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 90 bp | GTCCATGCCATATGCCTGACTAGGCCACATTCTAATGACAAGCTCTaGACAGTGCCAGGCTTGAGGCTGGTGTGGGGACATGGCGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: VHAICLTRPHSNDKL*TVPGLRLVWGHGVL Trigger: CAGCACGCCATGTCCCCACACCAGCCTCAAGCCTGGCACTGTTCAGAGCTTGTCATTAGAATGTGGCCTAGTCAGGCATATGGCATGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 90 bp | CCCTTGACCTCCGAGTGCCCTCACAGCAGAGCCCTCCTCTTTCAGTaGGATTTCTGTGTTGTGCTAGCTTCCCTCAGCTTCTTCCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: PLTSECPHSRALLFQ*DFCVVLASLSFFLG Trigger: GCCAAGGAAGAAGCTGAGGGAAGCTAGCACAACACAGAAATCTCACTGAAAGAGGAGGGCTCTGCTGTGAGGGCACTCGGAGGTCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 90 bp | AGTGGAGAGCTGCATGTGGCTTTAGGGGAAGGAAGTTATCAAAGATaGCGAACTTCCGGCGCATCCTGCCTCCATCCTCCGGTGCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: SGELHVALGEGSYQR*RTSGASCLHPPVLR Trigger: CCTCAGCACCGGAGGATGGAGGCAGGATGCGCCGGAAGTTCGTCATCTTTGATAACTTCCTTCCCCTAAAGCCACATGCAGCTCTCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR GCA 90 bp | CTTCCTGTCTGGGTCTTTGCCCCCTCTGTCCCTCCTGTCACAGACTaGGGTACTCTTGTCCCTTTGCTCTTCTGTCGAAGAGACACATGG | + |
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Preference number: 1 (lower is better) Translates to: LPVWVFAPSVPPVTD*GTLVPLLFCRRDTW Trigger: CCATGTGTCTCTTCGACAGAAGAGCAAAGGGACAAGAGTACCGCAGTCTGTGACAGGAGGGACAGAGGGGGCAAAGACCCAGACAGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CCA 90 bp | TGTGGCTCTCTTCCCTATTTAGCACGAGTGAAGTCACTGAGTGTCTaGGAGCTGTACAGAAGCCAGGCCAACCCAGTCCTGTGGAGGGGT | + |
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Preference number: 1 (lower is better) Translates to: CGSLPYLARVKSLSV*ELYRSQANPVLWRG Trigger: ACCCCTCCACAGGACTGGGTTGGCCTGGCTTCTGTACAGCTCCCAGACACTCAGTGACTTCACTCGTGCTAAATAGGGAAGAGAGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR GCA 90 bp | CGCATCCTGCCTCCATCCTCCGGTGCTGAGGTTACAGATGTGCACTaGTGTACCCTATTCACACAGTTCTGTGAACCCAACCAGGACTTC | + |
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Preference number: 1 (lower is better) Translates to: RILPPSSGAEVTDVH*CTLFTQFCEPNQDF Trigger: GAAGTCCTGGTTGGGTTCACAGAACTGTGTGAATAGGGTACAGCAGTGCACATCTGTAACCTCAGCACCGGAGGATGGAGGCAGGATGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 90 bp | ATAGAAGCAGTGCTGAGCATCAGGGCCATCTTAGGGTTTCTCTGGTaGAAGGCAGGATGCAGCTGGAGGGATCCGTTTGAGAGCTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: IEAVLSIRAILGFLW*KAGCSWRDPFESSL Trigger: AAGGGAGCTCTCAAACGGATCCCTCCAGCTGCATCCTGCCTTTCACCAGAGAAACCCTAAGATGGCCCTGATGCTCAGCACTGCTTCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 90 bp | CAAATGCTATTTGCTCCATGCTGCGGATTCTGTGGTAAGAGCTGGTaGCAGCACTTAGCAAGCAGGACGGGGACAAGTGGGGTAACAGCC | + |
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Preference number: 1 (lower is better) Translates to: QMLFAPCCGFCGKSW*QHLASRTGTSGVTA Trigger: GGCTGTTACCCCACTTGTCCCCGTCCTGCTTGCTAAGTGCTGTCACCAGCTCTTACCACAGAATCCGCAGCATGGAGCAAATAGCATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CCA 90 bp | TGTGCTAGCTTCCCTCAGCTTCTTCCTTGGCACAGAGATGTTCTTTaGGCCCCATATCCATGTCAGCCTTTGAGGATGAAGTCTTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: CASFPQLLPWHRDVL*APYPCQPLRMKSWA Trigger: GGCCCAAGACTTCATCCTCAAAGGCTGACATGGATATGGGGCCCAAAGAACATCTCTGTGCCAAGGAAGAAGCTGAGGGAAGCTAGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR GCA 90 bp | TCCATTGACATTTGTGCTGCCTCTTCTCCCGGACCTTGGGCAGCTTaGTTTCTGGGTTATTCTGTAGGGCTTTGTTTCTGTGGGCATCTG | + |
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Preference number: 1 (lower is better) Translates to: SIDICAASSPGPWAA*FLGYSVGLCFCGHL Trigger: CAGATGCCCACAGAAACAAAGCCCTACAGAATAACCCAGAAAGCAAGCTGCCCAAGGTCCGGGAGAAGAGGCAGCACAAATGTCAATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR GCA 90 bp | CCATCTGTCTGCCTTCCTCCCAGCATTCACATGGCTGGACCAGGTTaGCCAATTTACTCCAAATTCAGGACTGTAAGCCTCACTGGTACT | + |
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Preference number: 1 (lower is better) Translates to: PSVCLPPSIHMAGPG*PIYSKFRTVSLTGT Trigger: AGTACCAGTGAGGCTTACAGTCCTGAATTTGGAGTAAATTGGGCAACCTGGTCCAGCCATGTGAATGCTGGGAGGAAGGCAGACAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 90 bp | CAAATCGAGCTGCAAATTTCTCCTCCTCTGACCCAAGTCTGCTTCTaGACCCCTGTGTCAGGAAAGGCAGTGCTAATTTCCAGAGACCCT | + |
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Preference number: 1 (lower is better) Translates to: QIELQISPPLTQVCF*TPVSGKAVLISRDP Trigger: AGGGTCTCTGGAAATTAGCACTGCCTTTCCTGACACAGGGGTTCAGAAGCAGACTTGGGTCAGAGGAGGAGAAATTTGCAGCTCGATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 90 bp | TCTAATGTAACAGGTCCCAAATCGAGCTGCAAATTTCTCCTCCTCTaGCCCAAGTCTGCTTCTGAACCCCTGTGTCAGGAAAGGCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: SNVTGPKSSCKFLLL*PKSASEPLCQERQC Trigger: GCACTGCCTTTCCTGACACAGGGGTTCAGAAGCAGACTTGGGTCAGAGGAGGAGAAATTTGCAGCTCGATTTGGGACCTGTTACATTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CCA 90 bp | CCATCTAGTTCCATTGACATTTGTGCTGCCTCTTCTCCCGGACCTTaGGCAGCTTGCTTTCTGGGTTATTCTGTAGGGCTTTGTTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: PSSSIDICAASSPGP*AACFLGYSVGLCFC Trigger: ACAGAAACAAAGCCCTACAGAATAACCCAGAAAGCAAGCTGCCCAAGGTCCGGGAGAAGAGGCAGCACAAATGTCAATGGAACTAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CCA 90 bp | TCAGTGAGATTTCTGTGTTGTGCTAGCTTCCCTCAGCTTCTTCCTTaGCACAGAGATGTTCTTTGGGCCCCATATCCATGTCAGCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: SVRFLCCASFPQLLP*HRDVLWAPYPCQPL Trigger: CAAAGGCTGACATGGATATGGGGCCCAAAGAACATCTCTGTGCCAAGGAAGAAGCTGAGGGAAGCTAGCACAACACAGAAATCTCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CCA 90 bp | ACCAGGTTGCCCAATTTACTCCAAATTCAGGACTGTAAGCCTCACTaGTACTCTGCCAGTTCCCCTTCCAGAAGGCCTTACTCTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: TRLPNLLQIQDCKPH*YSASSPSRRPYSFF Trigger: GAAGAAAGAGTAAGGCCTTCTGGAAGGGGAACTGGCAGAGTACCAGTGAGGCTTACAGTCCTGAATTTGGAGTAAATTGGGCAACCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 90 bp | CCATATCCATGTCAGCCTTTGAGGATGAAGTCTTGGGCCTCTCAATaGTACATCTGGACAATCCAGGTATCCCCTCCAGATCTCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: PYPCQPLRMKSWASQ*YIWTIQVSPPDLSF Trigger: AAAGGAGAGATCTGGAGGGGATACCTGGATTGTCCAGATGTATCATTGAGAGGCCCAAGACTTCATCCTCAAAGGCTGACATGGATATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 90 bp | CAGAGCTCAAGGGGACTGGGCTCTCCTGTGAGCTGTTTGCATCATTaGTTGATTGATGCAGAAATGGAGTTAGATGAGGATCTCCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: QSSRGLGSPVSCLHH*LIDAEMELDEDLLS Trigger: TGACAGGAGATCCTCATCTAACTCCATTTCTGCATCAATCAATCAATGATGCAAACAGCTCACAGGAGAGCCCAGTCCCCTTGAGCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 90 bp | GTTAGACTTTCACGTTTATGCATCAGAGATTATTTGTCTGTGTGGTaGCATCAGTCTAGCAGTAAGATTTACACCCCAGCATCTGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: VRLSRLCIRDYLSVW*HQSSSKIYTPASGR Trigger: TCTGCCAGATGCTGGGGTGTAAATCTTACTGCTAGACTGATGTCACCACACAGACAAATAATCTCTGATGCATAAACGTGAAAGTCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CCA 90 bp | GTGGAAAGGACGAGGATTTCAGGGGGAGAACATCATGTGTCATGTTaGACCAGCATGATAATTTCCTTCATCTTAAGACTCAGTTATGTT | + |
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Preference number: 1 (lower is better) Translates to: VERTRISGGEHHVSC*TSMIISFILRLSYV Trigger: AACATAACTGAGTCTTAAGATGAAGGAAATTATCATGCTGGTCCAACATGACACATGATGTTCTCCCCCTGAAATCCTCGTCCTTTCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR GCA 90 bp | AGAACGCAGGCAGGTGAGCCAGCTGCAGTCATGGGCAGAGAGGAGGACCCCTTGCATCCCACCCACCACTaGTGCACCACGCTGACCCCA | + |
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Preference number: 2 (lower is better) Translates to: RTQAGEPAAVMGREEDPLHPTHH*CTTLTP Trigger: TGGGGTCAGCGTGGTGCAGCAGTGGTGGGTGGGATG...CAAGGGGTCCTCCTCTCTGCCCATGACTGCAGCTGGCTCACCTGCCTGCGTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR TCA 90 bp | GATGTTGCCCCCTCCCCTCTGGCTCACAGTGGAGAGCTGCATGTGGCTTTAGGGGGGGACATGGCGTGCTaGCTTCCAGAGACCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: DVAPSPLAHSGELHVALGGDMAC*LPETLQ Trigger: CTGGAGGGTCTCTGGAAGTCAGCACGCCATGTCCCC...CCCTAAAGCCACATGCAGCTCTCCACTGTGAGCCAGAGGGGAGGGGGCAACATC 62% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR TCA 90 bp | AGAACGCAGGCAGGTGAGCCAGCTGCAGTCATGGGCAGAGAGGAGGACCCCTTGGAACAGTGCCAGGCTTaGGGCTGGTGTGGGGACATG | + |
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Preference number: 2 (lower is better) Translates to: RTQAGEPAAVMGREEDPLEQCQA*GWCGDM Trigger: CATGTCCCCACACCAGCCTCAAGCCTGGCACTGTTC...CAAGGGGTCCTCCTCTCTGCCCATGACTGCAGCTGGCTCACCTGCCTGCGTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR TCA 90 bp | GATGTTGCCCCCTCCCCTCTGGCTCACAGTGGAGAGCTGCATGTGGCTTTAGGGACTGCTGCACCACGCTaGCCCCATCTGTCTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: DVAPSPLAHSGELHVALGTAAPR*PHLSAF Trigger: GAAGGCAGACAGATGGGGTCAGCGTGGTGCAGCAGT...CCCTAAAGCCACATGCAGCTCTCCACTGTGAGCCAGAGGGGAGGGGGCAACATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | GATGTTGCCCCCTCCCCTCTGGCTCACAGTGGAGAGCTGCATGTGGCTTTAGGGACAGCCCCCAGGGGATaGATAAGGGTGGAGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: DVAPSPLAHSGELHVALGTAPRG*IRVEAG Trigger: TCCTGCCTCCACCCTTATCCATCCCCTGGGGGCTGT...CCCTAAAGCCACATGCAGCTCTCCACTGTGAGCCAGAGGGGAGGGGGCAACATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | GATGTTGCCCCCTCCCCTCTGGCTCACAGTGGAGAGCTGCATGTGGCTTTAGGGCCTACCCCTGCTAGATaGAGAACACAGCCCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: DVAPSPLAHSGELHVALGPTPAR*RTQPPG Trigger: CCCTGGGGGCTGTGTTCTCCATCTAGCAGGGGTAGG...CCCTAAAGCCACATGCAGCTCTCCACTGTGAGCCAGAGGGGAGGGGGCAACATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CAA 90 bp | CCTCTTGGGAGGGAGTGGGGCTCAGGATGTCCCTTCTGGGCGCAGTaGGAGACAAGTTCTCGCATCAGGCTCTCTGCCTGGGCTCTAATG | + |
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Preference number: 2 (lower is better) Translates to: PLGREWGSGCPFWAQ*ETSSRIRLSAWALM Trigger: CATTAGAGCCCAGGCAGAGAGCCTGATGCGAGAACTTGTCTCCAACTGCGCCCAGAAGGGACATCCTGAGCCCCACTCCCTCCCAAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CAA 90 bp | GTCGAAGAGACACATGGTCCCGTGCTGGTCCTGGCTGGCACAGTCTaGTACTCCGCAGGTTGTTGTGGCCATGGGGGTGGACAGATCAGC | + |
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Preference number: 2 (lower is better) Translates to: VEETHGPVLVLAGTV*YSAGCCGHGGGQIS Trigger: GCTGATCTGTCCACCCCCATGGCCACAACAACCTGCGGAGTACAAGACTGTGCCAGCCAGGACCAGCACGGGACCATGTGTCTCTTCGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CAA 90 bp | GCCCCCTCTGTCCCTCCTGTCACAGACTGCGGTACTCTTGTCCCTTaGCTCTTCTGTCGAAGAGACACATGGTCCCGTGCTGGTCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: APSVPPVTDCGTLVP*LFCRRDTWSRAGPG Trigger: GCCAGGACCAGCACGGGACCATGTGTCTCTTCGACAGAAGAGCAAAGGGACAAGAGTACCGCAGTCTGTGACAGGAGGGACAGAGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | TGCCCCCTCTGTCCCTCCTGTCACAGACTGCGGTACTCTTGTCCCTTTGCTCTTAGTCCTGTGGAGGGGTaGGCAGGGCATCCCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: CPLCPSCHRLRYSCPFALSPVEG*AGHPCG Trigger: ACCACAGGGATGCCCTGCCCACCCCTCCACAGGACT...AAGAGCAAAGGGACAAGAGTACCGCAGTCTGTGACAGGAGGGACAGAGGGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | AGAACGCAGGCAGGTGAGCCAGCTGCAGTCATGGGCAGAGAGGAGGACCCCTTGTCTTCTCCCGGACCTTaGGCAGCTTGCTTTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: RTQAGEPAAVMGREEDPLSSPGP*AACFLG Trigger: ACCCAGAAAGCAAGCTGCCCAAGGTCCGGGAGAAGA...CAAGGGGTCCTCCTCTCTGCCCATGACTGCAGCTGGCTCACCTGCCTGCGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | AGAACGCAGGCAGGTGAGCCAGCTGCAGTCATGGGCAGAGAGGAGGACCCCTTGAGCTTATCTCCCTCCTaGGTGGGAAAGCTTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: RTQAGEPAAVMGREEDPLSLSPS*VGKLWG Trigger: CCCCCAAAGCTTTCCCACCCAGGAGGGAGATAAGCT...CAAGGGGTCCTCCTCTCTGCCCATGACTGCAGCTGGCTCACCTGCCTGCGTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR GCA 90 bp | GATGTTGCCCCCTCCCCTCTGGCTCACAGTGGAGAGCTGCATGTGGCTTTAGGGCTGACCCCATCTGTCTaGCTTCCTCCCAGCATTCAC | + |
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Preference number: 2 (lower is better) Translates to: DVAPSPLAHSGELHVALGLTPSV*LPPSIH Trigger: GTGAATGCTGGGAGGAAGGCAGACAGATGGGGTCAG...CCCTAAAGCCACATGCAGCTCTCCACTGTGAGCCAGAGGGGAGGGGGCAACATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR TCA 90 bp | GATGTTGCCCCCTCCCCTCTGGCTCACAGTGGAGAGCTGCATGTGGCTTTAGGGGTCAACAGGAGGAGCTaGGCCCAGAACTATATTCGC | + |
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Preference number: 2 (lower is better) Translates to: DVAPSPLAHSGELHVALGVNRRS*AQNYIR Trigger: GCGAATATAGTTCTGGGCTCAGCTCCTCCTGTTGAC...CCCTAAAGCCACATGCAGCTCTCCACTGTGAGCCAGAGGGGAGGGGGCAACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | GCCCTCCCCAGCACAGCTTCTCAACGACTCAGGTCAAGCCTGGGTATCACCAGGACTAACCTTCCTGTCTaGGTCTTTGCCCCCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: ALPSTASQRLRSSLGITRTNLPV*VFAPSV Trigger: GACAGAGGGGGCAAAGACCCAGACAGGAAGGTTAGT...CCTGGTGATACCCAGGCTTGACCTGAGTCGTTGAGAAGCTGTGCTGGGGAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | ACCACGCTGACCCCATCTGTCTGCCTTCCTCCCAGCATTCACATGGCTGGACCAAAGGCAGGATGCAGCTaGAGGGATCCGTTTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: TTLTPSVCLPPSIHMAGPKAGCS*RDPFES Trigger: GCTCTCAAACGGATCCCTCCAGCTGCATCCTGCCTT...TGGTCCAGCCATGTGAATGCTGGGAGGAAGGCAGACAGATGGGGTCAGCGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR TCA 90 bp | AGAACGCAGGCAGGTGAGCCAGCTGCAGTCATGGGCAGAGAGGAGGACCCCTTGCTCAGGCAGAGATTATaGGGCAAAGGCATCTTAAGC | + |
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Preference number: 2 (lower is better) Translates to: RTQAGEPAAVMGREEDPLLRQRL*GKGILS Trigger: GCTTAAGATGCCTTTGCCTCATAATCTCTGCCTGAG...CAAGGGGTCCTCCTCTCTGCCCATGACTGCAGCTGGCTCACCTGCCTGCGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR TCA 90 bp | AGAACGCAGGCAGGTGAGCCAGCTGCAGTCATGGGCAGAGAGGAGGACCCCTTGGCCCTCCTCTTTCAGTaGGATTTCTGTGTTGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: RTQAGEPAAVMGREEDPLALLFQ*DFCVVL Trigger: TAGCACAACACAGAAATCTCACTGAAAGAGGAGGGC...CAAGGGGTCCTCCTCTCTGCCCATGACTGCAGCTGGCTCACCTGCCTGCGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR GCA 90 bp | GAGTTAGATGAGGATCTCCTGTCACGTTCCAGGCTCCTGAGAGATGCTGGCTGGGTGTTTGGGAGATGTTaGCCCCTCCCCTCTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: ELDEDLLSRSRLLRDAGWVFGRC*PLPSGS Trigger: TGAGCCAGAGGGGAGGGGGCAACATCTCCCAAACAC...CCAGCCAGCATCTCTCAGGAGCCTGGAACGTGACAGGAGATCCTCATCTAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTGCACCACGCTGACCCCATCTGTCTGCCTTCCTCCCAGCATTCACATGGCGGACCTTGGGCAGCTTaGTTTCTGGGTTATTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: LLHHADPICLPSSQHSHGGPWAA*FLGYSV Trigger: TACAGAATAACCCAGAAAGCAAGCTGCCCAAGGTCC...GCCATGTGAATGCTGGGAGGAAGGCAGACAGATGGGGTCAGCGTGGTGCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTGCACCACGCTGACCCCATCTGTCTGCCTTCCTCCCAGCATTCACATGGCCCAGAAATGTCCCTGTaGCTCTCTTCCCTATTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLHHADPICLPSSQHSHGPEMSL*LSSLFS Trigger: GCTAAATAGGGAAGAGAGCCACAGGGACATTTCTGG...GCCATGTGAATGCTGGGAGGAAGGCAGACAGATGGGGTCAGCGTGGTGCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 90 bp | GAGACCCTCCAGCTTCTCACGAGACTAACCTTCCTGTCTGGGTCTTaGCCCCCTCTGTCAACAGGAGGAGCTGAGCCCAGAACTATATTC | + |
|
Preference number: 2 (lower is better) Translates to: ETLQLLTRLTFLSGS*PPLSTGGAEPRTIF Trigger: GAATATAGTTCTGGGCTCAGCTCCTCCTGTTGACAGAGGGGGCAAAGACCCAGACAGGAAGGTTAGTCTCGTGAGAAGCTGGAGGGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR TCA 90 bp | GATGTTGCCCCCTCCCCTCTGGCTCACAGTGGAGAGCTGCATGTGGCTTTAGGGAAATTTCTCCTCCTCTaGCCCAAGTCTGCTTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: DVAPSPLAHSGELHVALGKFLLL*PKSASE Trigger: TTCAGAAGCAGACTTGGGTCAGAGGAGGAGAAATTT...CCCTAAAGCCACATGCAGCTCTCCACTGTGAGCCAGAGGGGAGGGGGCAACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR GCA 90 bp | AACAGGTCCCAAATCGAGCTGCAAATTTCTCCTCCTCTGACCCAAGTCTGCTTCAGACACATGGTCCCGTaGTGGTCCTGGCTGGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: NRSQIELQISPPLTQVCFRHMVP*WSWLAQ Trigger: CTGTGCCAGCCAGGACCAGCACGGGACCATGTGTCT...GAAGCAGACTTGGGTCAGAGGAGGAGAAATTTGCAGCTCGATTTGGGACCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | GATGTGCACTGCTGTACCCTATTCACACAGTTCTGTGAACCCAACCAGGACTTCGCCATGAACGCCAACTaGCATCCTGGCTGCTTCCGC | + |
|
Preference number: 2 (lower is better) Translates to: DVHCCTLFTQFCEPNQDFAMNAN*HPGCFR Trigger: GCGGAAGCAGCCAGGATGCCAGTTGGCGTTCATGGC...GAAGTCCTGGTTGGGTTCACAGAACTGTGTGAATAGGGTACAGCAGTGCACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCCTCCATCCTCCGGTGCTGAGGTTACAGATGTGCACTGCTGTACCCTATCTGGAGGGACTGAGCTaGTCAGACACAGAGGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: SCLHPPVLRLQMCTAVPYLEGLS*SDTEDK Trigger: TTTGTCCTCTGTGTCTGACCAGCTCAGTCCCTCCAG...ATAGGGTACAGCAGTGCACATCTGTAACCTCAGCACCGGAGGATGGAGGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR TCA 90 bp | GATGTGCACTGCTGTACCCTATTCACACAGTTCTGTGAACCCAACCAGGACTTCAGTCTCTGGAGGGACTaGGCTGGTCAGACACAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: DVHCCTLFTQFCEPNQDFSLWRD*AGQTQR Trigger: CCTCTGTGTCTGACCAGCTCAGTCCCTCCAGAGACT...GAAGTCCTGGTTGGGTTCACAGAACTGTGTGAATAGGGTACAGCAGTGCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR GCA 90 bp | ATCTGTCTGCCTTCCTCCCAGCATTCACATGGCTGGACCAGGTTGCCCAATTTATCCTGTCTGGGTCTTTaGCCCCTCTGTCAACAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: ICLPSSQHSHGWTRLPNLSCLGL*PLCQQE Trigger: CTCCTGTTGACAGAGGGGGCAAAGACCCAGACAGGA...TAAATTGGGCAACCTGGTCCAGCCATGTGAATGCTGGGAGGAAGGCAGACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CCA 90 bp | GATGTGCACTGCTGTACCCTATTCACACAGTTCTGTGAACCCAACCAGGACTTCCTCCGCAGGTTGTTGTaGCCATGGGGGTGGACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: DVHCCTLFTQFCEPNQDFLRRLL*PWGWTD Trigger: ATCTGTCCACCCCCATGGCCACAACAACCTGCGGAG...GAAGTCCTGGTTGGGTTCACAGAACTGTGTGAATAGGGTACAGCAGTGCACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGCCTCCATCCTCCGGTGCTGAGGTTACAGATGTGCACTGCTGTACCCTATCCTGGGGACTTTTCCTaGCTTCCTGAGCATTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SCLHPPVLRLQMCTAVPYPGDFS*LPEHCL Trigger: AAGACAATGCTCAGGAAGCCAGGAAAAGTCCCCAGG...ATAGGGTACAGCAGTGCACATCTGTAACCTCAGCACCGGAGGATGGAGGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 90 bp | CTCTTGATGGATTCGCTGAGACTGGATGGCCTTGCAGTTGAGGCCTaGAAGCAGGGTGAGAACTCCCGATGTTTCCGTTTGTTTGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LLMDSLRLDGLAVEA*KQGENSRCFRLFAQ Trigger: CTGAGCAAACAAACGGAAACATCGGGAGTTCTCACCCTGCTTCAAGGCCTCAACTGCAAGGCCATCCAGTCTCAGCGAATCCATCAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGTCCGTCCATGCCATATGCCTGACTAGGCCACATTCTAATGACAAGCTCTTGCAGTTGAGGCCTTaGAGCAGGGTGAGAACTCCC | + |
|
Preference number: 2 (lower is better) Translates to: CLSVHAICLTRPHSNDKLLQLRP*SRVRTP Trigger: GGGAGTTCTCACCCTGCTTCAAGGCCTCAACTGCAA...GAGCTTGTCATTAGAATGTGGCCTAGTCAGGCATATGGCATGGACGGACAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR TCA 90 bp | GATGTGCACTGCTGTACCCTATTCACACAGTTCTGTGAACCCAACCAGGACTTCCCCAATTCCCCTCCCTaGGGAATTCTGTCTTCCGTC | + |
|
Preference number: 2 (lower is better) Translates to: DVHCCTLFTQFCEPNQDFPNSPP*GILSSV Trigger: GACGGAAGACAGAATTCCTCAGGGAGGGGAATTGGG...GAAGTCCTGGTTGGGTTCACAGAACTGTGTGAATAGGGTACAGCAGTGCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCCTCTTTGGGTCTTTTGTAGTCTCTGGAGGGACTGAGCTGGTCAGACACGTGAATTGTGTGATGTaGAGCTGGCTGACCTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SSLFGSFVVSGGTELVRHVNCVM*SWLTWA Trigger: AGCCCAGGTCAGCCAGCTCCACATCACACAATTCAC...GTGTCTGACCAGCTCAGTCCCTCCAGAGACTACAAAAGACCCAAAGAGGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | GAGTTAGATGAGGATCTCCTGTCACGTTCCAGGCTCCTGAGAGATGCTGGCTGGACCCCTGCTATTTATTaGGGGGCCAAGACTTACAGA | + |
|
Preference number: 2 (lower is better) Translates to: ELDEDLLSRSRLLRDAGWTPAIY*GAKTYR Trigger: TCTGTAAGTCTTGGCCCCCCAATAAATAGCAGGGGT...CCAGCCAGCATCTCTCAGGAGCCTGGAACGTGACAGGAGATCCTCATCTAACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CAA 90 bp | GGACAGACATGTCACAAGGCCACCAGAACCACAACCAGGAAGATGTaGCCCTACTTGGTCATTCTTGGGTGGAAAGGACGAGGATTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GQTCHKATRTTTRKM*PYLVILGWKGRGFQ Trigger: CTGAAATCCTCGTCCTTTCCACCCAAGAATGACCAAGTAGGGCAACATCTTCCTGGTTGTGGTTCTGGTGGCCTTGTGACATGTCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR TCA 90 bp | GATGTGCACTGCTGTACCCTATTCACACAGTTCTGTGAACCCAACCAGGACTTCTCTAATGACAAGCTCTaGACAGTGCCAGGCTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: DVHCCTLFTQFCEPNQDFSNDKL*TVPGLR Trigger: CCTCAAGCCTGGCACTGTTCAGAGCTTGTCATTAGA...GAAGTCCTGGTTGGGTTCACAGAACTGTGTGAATAGGGTACAGCAGTGCACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR TCA 90 bp | GAGTTAGATGAGGATCTCCTGTCACGTTCCAGGCTCCTGAGAGATGCTGGCTGGGTGGCAATGAATAGATaGGGAGTTTTAAGTTGGCGA | + |
|
Preference number: 2 (lower is better) Translates to: ELDEDLLSRSRLLRDAGWVAMNR*GVLSWR Trigger: TCGCCAACTTAAAACTCCTCATCTATTCATTGCCAC...CCAGCCAGCATCTCTCAGGAGCCTGGAACGTGACAGGAGATCCTCATCTAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCCTCCATCCTCCGGTGCTGAGGTTACAGATGTGCACTGCTGTACCCTATAGTCTCCTACCAGTGTaGCATCTCTGTTTAAGATTC | + |
|
Preference number: 2 (lower is better) Translates to: SCLHPPVLRLQMCTAVPYSLLPV*HLCLRF Trigger: GAATCTTAAACAGAGATGCCACACTGGTAGGAGACT...ATAGGGTACAGCAGTGCACATCTGTAACCTCAGCACCGGAGGATGGAGGCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCCCTCTTTGGGTCTTTTGTAGTCTCTGGAGGGACTGAGCTGGTCAGACACGCATCTCAACTGATCTaGTTGTGGGCTTTGTCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SSLFGSFVVSGGTELVRHASQLI*LWALSY Trigger: GTAGGACAAAGCCCACAACCAGATCAGTTGAGATGC...GTGTCTGACCAGCTCAGTCCCTCCAGAGACTACAAAAGACCCAAAGAGGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR GCA 90 bp | ATCTGTCTGCCTTCCTCCCAGCATTCACATGGCTGGACCAGGTTGCCCAATTTACAACCAGGAAGATGTTaGCCTACTTGGTCATTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: ICLPSSQHSHGWTRLPNLQPGRC*PTWSFL Trigger: CAAGAATGACCAAGTAGGGCAACATCTTCCTGGTTG...TAAATTGGGCAACCTGGTCCAGCCATGTGAATGCTGGGAGGAAGGCAGACAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR GCA 90 bp | GAGTTAGATGAGGATCTCCTGTCACGTTCCAGGCTCCTGAGAGATGCTGGCTGGCTACCGCCCAGACTTTaGTTAAGAAAGCAAATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: ELDEDLLSRSRLLRDAGWLPPRL*LRKQIF Trigger: AAAGATTTGCTTTCTTAAGCAAAGTCTGGGCGGTAG...CCAGCCAGCATCTCTCAGGAGCCTGGAACGTGACAGGAGATCCTCATCTAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCCTCTTTGGGTCTTTTGTAGTCTCTGGAGGGACTGAGCTGGTCAGACACCACAAGCAACCAGTCTaGATTATACTCACATGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: SSLFGSFVVSGGTELVRHHKQPV*IILTCS Trigger: GCTACATGTGAGTATAATTCAGACTGGTTGCTTGTG...GTGTCTGACCAGCTCAGTCCCTCCAGAGACTACAAAAGACCCAAAGAGGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR GCA 90 bp | GATGTGCACTGCTGTACCCTATTCACACAGTTCTGTGAACCCAACCAGGACTTCATGTTTCCGTTTGTTTaGTCAGGAATAGTGAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: DVHCCTLFTQFCEPNQDFMFPFV*SGIVKE Trigger: TTCCTTCACTATTCCTGAGCAAACAAACGGAAACAT...GAAGTCCTGGTTGGGTTCACAGAACTGTGTGAATAGGGTACAGCAGTGCACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR GCA 90 bp | TATGCATCAGAGATTATTTGTCTGTGTGGTGACATCAGTCTAGCAGTAAGATTTGCCTCACTGGTACTCTaGCAGTTCCCCTTCCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: YASEIICLCGDISLAVRFASLVL*QFPFQK Trigger: CTTCTGGAAGGGGAACTGGCAGAGTACCAGTGAGGC...AAATCTTACTGCTAGACTGATGTCACCACACAGACAAATAATCTCTGATGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CAA 90 bp | GGTGGAAAGGACGAGGATTTCAGGGGGAGAACATCATGTGTCATGTaGGACCAGCATGATAATTTCCTTCATCTTAAGACTCAGTTATGT | + |
|
Preference number: 2 (lower is better) Translates to: GGKDEDFRGRTSCVM*DQHDNFLHLKTQLC Trigger: ACATAACTGAGTCTTAAGATGAAGGAAATTATCATGCTGGTCCAACATGACACATGATGTTCTCCCCCTGAAATCCTCGTCCTTTCCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | TATGCATCAGAGATTATTTGTCTGTGTGGTGACATCAGTCTAGCAGTAAGATTTCACAGAGATGTTCTTTaGGCCCCATATCCATGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: YASEIICLCGDISLAVRFHRDVL*APYPCQ Trigger: CTGACATGGATATGGGGCCCAAAGAACATCTCTGTG...AAATCTTACTGCTAGACTGATGTCACCACACAGACAAATAATCTCTGATGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | TATGCATCAGAGATTATTTGTCTGTGTGGTGACATCAGTCTAGCAGTAAGATTTCTACTTGGTCATTCTTaGGTGGAAAGGACGAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: YASEIICLCGDISLAVRFLLGHS*VERTRI Trigger: AATCCTCGTCCTTTCCACCCAAGAATGACCAAGTAG...AAATCTTACTGCTAGACTGATGTCACCACACAGACAAATAATCTCTGATGCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR-3UTR CCA 90 bp | TATGCATCAGAGATTATTTGTCTGTGTGGTGACATCAGTCTAGCAGTAAGATTTAGATGTTGCCCTACTTaGTCATTCTTGGGTGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: YASEIICLCGDISLAVRFRCCPT*SFLGGK Trigger: CTTTCCACCCAAGAATGACCAAGTAGGGCAACATCT...AAATCTTACTGCTAGACTGATGTCACCACACAGACAAATAATCTCTGATGCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CAA 90 bp | CATGATAATTTCCTTCATCTTAAGACTCAGTTATGTTTAAGAGTATaGCTATCAAGTACATTAGAGCGGTCACCACATGCTGGCACATTC | + |
|
Preference number: 2 (lower is better) Translates to: HDNFLHLKTQLCLRV*LSSTLERSPHAGTF Trigger: GAATGTGCCAGCATGTGGTGACCGCTCTAATGTACTTGATAGCAATACTCTTAAACATAACTGAGTCTTAAGATGAAGGAAATTATCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CCA 72 bp | AGGCAGCCAGGGTGGCAGAAGCCTCTTGGGAGGGAGTaGGGCTCAGGATGTCCCTTCTGGGCGCAGTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RQPGWQKPLGRE*GSGCPFWAQLE Trigger: CTCCAACTGCGCCCAGAAGGGACATCCTGAGCCCCACTCCCTCCCAAGAGGCTTCTGCCACCCTGGCTGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | GATGTTGCCCCCTCCCCTCTGGCTCACAGTGGAGAGCTGCATGTGGCTTTAGGGGGTGGCAGAAGCCTCTaGGGAGGGAGTGGGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DVAPSPLAHSGELHVALGGGRSL*GGSGAQ Trigger: CTGAGCCCCACTCCCTCCCAAGAGGCTTCTGCCACC...CCCTAAAGCCACATGCAGCTCTCCACTGTGAGCCAGAGGGGAGGGGGCAACATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR TCA 72 bp | CTCAGGTCAAGCCTGGGTATCACCAGGTCCTCCCCTTaGCCTCCGAGTGCCCTCACAGCAGAGCCCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LRSSLGITRSSP*PPSALTAEPSS Trigger: AGAGGAGGGCTCTGCTGTGAGGGCACTCGGAGGTCAAGGGGAGGACCTGGTGATACCCAGGCTTGACCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | GGGAGTGGGGCTCAGGATGTCCCTTCTGGGCGCAGTTaGAGACAAGTTCTCGCATCAGGCTCTCTGCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GSGAQDVPSGRS*RQVLASGSLPG Trigger: CCCAGGCAGAGAGCCTGATGCGAGAACTTGTCTCCAACTGCGCCCAGAAGGGACATCCTGAGCCCCACTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| 3UTR CCA 72 bp | GCCGTGAGCTTATCTCCCTCCTGGGTGGGAAAGCTTTaGGGGGAGCACCCAGCAACGCCTTTGTGCCCCGAA | + |
|
Preference number: 3 (lower is better) Translates to: AVSLSPSWVGKL*GEHPATPLCPE Trigger: TTCGGGGCACAAAGGCGTTGCTGGGTGCTCCCCCCAAAGCTTTCCCACCCAGGAGGGAGATAAGCTCACGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR GCA 72 bp | ACCCACCACTGCTGCACCACGCTGACCCCATCTGTCTaGCTTCCTCCCAGCATTCACATGGCTGGACCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: THHCCTTLTPSV*LPPSIHMAGPG Trigger: ACCTGGTCCAGCCATGTGAATGCTGGGAGGAAGGCAGACAGATGGGGTCAGCGTGGTGCAGCAGTGGTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | AGGGTGGACCCGGAAGAACACTGGTTACAAAGACCGTaGGAGCTGAAGGGTGGGGTGTGCGCCCTGACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RVDPEEHWLQRP*ELKGGVCALTA Trigger: AGCTGTCAGGGCGCACACCCCACCCTTCAGCTCCCACGGTCTTTGTAACCAGTGTTCTTCCGGGTCCACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | GGATCTCCTGTCACGTTCCAGGCTCCTGAGAGATGCTaGCTGGGAGGCATCAGAGGGTTGGGCAGAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSPVTFQAPERC*LGGIRGLGRAL Trigger: CAGAGCTCTGCCCAACCCTCTGATGCCTCCCAGCCAGCATCTCTCAGGAGCCTGGAACGTGACAGGAGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR TCA 72 bp | TCCCTCACTGTGGGCTCTATACCTCCCCAGCAGCCGTaGGCTTATCTCCCTCCTGGGTGGGAAAGCTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLTVGSIPPQQP*AYLPPGWESFG Trigger: CCCAAAGCTTTCCCACCCAGGAGGGAGATAAGCTCACGGCTGCTGGGGAGGTATAGAGCCCACAGTGAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR GCA 72 bp | TGGTTACAAAGACCGTGGGAGCTGAAGGGTGGGGTGTaGGCCCTGACAGCTGAGGTCTCTCCTCTTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: WLQRPWELKGGV*ALTAEVSPLAG Trigger: ACCTGCAAGAGGAGAGACCTCAGCTGTCAGGGCGCACACCCCACCCTTCAGCTCCCACGGTCTTTGTAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTTCCTCCCAGCATTCACATGGCTGGACCAGGTTGCCCAATTTACTCCAACACCAGGTCCTCCCCTaGACCTCCGAGTGCCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LPSSQHSHGWTRLPNLLQHQVLP*TSECPH Trigger: GTGAGGGCACTCGGAGGTCAAGGGGAGGACCTGGTG...TTGGAGTAAATTGGGCAACCTGGTCCAGCCATGTGAATGCTGGGAGGAAGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR TCA 72 bp | ACTCATGACATCCCACCCACCACTGCTGCACCACGCTaGCCCCATCTGTCTGCCTTCCTCCCAGCATTCACA | + |
|
Preference number: 3 (lower is better) Translates to: THDIPPTTAAPR*PHLSAFLPAFT Trigger: TGTGAATGCTGGGAGGAAGGCAGACAGATGGGGTCAGCGTGGTGCAGCAGTGGTGGGTGGGATGTCATGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR GCA 72 bp | CTGGTAGCATGTGCCCCAGTTGATAGCTGGTCTTCCTaGACCAGTCTACAGCTGGCCTGGTGTAGGACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LVACAPVDSWSS*TSLQLAWCRTS Trigger: GGAGGTCCTACACCAGGCCAGCTGTAGACTGGTGCAGGAAGACCAGCTATCAACTGGGGCACATGCTACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | TACACCCCAGCATCTGGCAGACCCAGAGGCAAGGACTaGTTAAACACTGGCTGCCATTCCACTGGGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: YTPASGRPRGKD*LNTGCHSTGLQ Trigger: CTGCAGCCCAGTGGAATGGCAGCCAGTGTTTAACCAGTCCTTGCCTCTGGGTCTGCCAGATGCTGGGGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTTCCTCCCAGCATTCACATGGCTGGACCAGGTTGCCCAATTTACTCCAATTCCTGTCTGGGTCTTaGCCCCCTCTGTCCCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPSSQHSHGWTRLPNLLQFLSGS*PPLSLL Trigger: CAGGAGGGACAGAGGGGGCAAAGACCCAGACAGGAA...TTGGAGTAAATTGGGCAACCTGGTCCAGCCATGTGAATGCTGGGAGGAAGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | GATGTTGCCCCCTCCCCTCTGGCTCACAGTGGAGAGCTGCATGTGGCTTTAGGGGCACAGAGATGTTCTTaGGGCCCCATATCCATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: DVAPSPLAHSGELHVALGAQRCS*GPISMS Trigger: TGACATGGATATGGGGCCCAAAGAACATCTCTGTGC...CCCTAAAGCCACATGCAGCTCTCCACTGTGAGCCAGAGGGGAGGGGGCAACATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | CCTGGCTGGCACAGTCTTGTACTCCGCAGGTTGTTGTaGCCATGGGGGTGGACAGATCAGCACCAGATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PGWHSLVLRRLL*PWGWTDQHQIE Trigger: TTCTATCTGGTGCTGATCTGTCCACCCCCATGGCCACAACAACCTGCGGAGTACAAGACTGTGCCAGCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACTGTCCTTCCTGTCTGGGTCTTTGCCCCCTCTGTCCCTCCTGTCACAGACCTACTTGGTCATTCTaGGGTGGAAAGGACGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GDCPSCLGLCPLCPSCHRPTWSF*GGKDED Trigger: ATCCTCGTCCTTTCCACCCAAGAATGACCAAGTAGG...TCTGTGACAGGAGGGACAGAGGGGGCAAAGACCCAGACAGGAAGGACAGTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR GCA 72 bp | TCCCTCCTGTCACAGACTGCGGTACTCTTGTCCCTTTaGTCTTCTGTCGAAGAGACACATGGTCCCGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLLSQTAVLLSL*SSVEETHGPVL Trigger: CAGCACGGGACCATGTGTCTCTTCGACAGAAGAGCAAAGGGACAAGAGTACCGCAGTCTGTGACAGGAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | TGGCACAGTCTTGTACTCCGCAGGTTGTTGTGGCCATaGGGGTGGACAGATCAGCACCAGATAGAAGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WHSLVLRRLLWP*GWTDQHQIEAV Trigger: CACTGCTTCTATCTGGTGCTGATCTGTCCACCCCCATGGCCACAACAACCTGCGGAGTACAAGACTGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR TCA 72 bp | TCCGAGTGCCCTCACAGCAGAGCCCTCCTCTTTCAGTaGGATTTCTGTGTTGTGCTAGCTTCCCTCAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SECPHSRALLFQ*DFCVVLASLSF Trigger: GAAGCTGAGGGAAGCTAGCACAACACAGAAATCTCACTGAAAGAGGAGGGCTCTGCTGTGAGGGCACTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | CTTCCCTATTTAGCACGAGTGAAGTCACTGAGTGTCTaGGAGCTGTACAGAAGCCAGGCCAACCCAGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPYLARVKSLSV*ELYRSQANPVL Trigger: CAGGACTGGGTTGGCCTGGCTTCTGTACAGCTCCCAGACACTCAGTGACTTCACTCGTGCTAAATAGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGCACCACGCTGACCCCATCTGTCTGCCTTCCTCCCAGCATTCACATGGCGATGTTTCCGTTTGTTaGCTCAGGAATAGTGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLHHADPICLPSSQHSHGDVSVC*LRNSEG Trigger: TCCTTCACTATTCCTGAGCAAACAAACGGAAACATC...GCCATGTGAATGCTGGGAGGAAGGCAGACAGATGGGGTCAGCGTGGTGCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | GATGTTGCCCCCTCCCCTCTGGCTCACAGTGGAGAGCTGCATGTGGCTTTAGGGATCCATCTAGTTCCATaGACATTTGTGCTGCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: DVAPSPLAHSGELHVALGIHLVP*TFVLPL Trigger: AAGAGGCAGCACAAATGTCAATGGAACTAGATGGAT...CCCTAAAGCCACATGCAGCTCTCCACTGTGAGCCAGAGGGGAGGGGGCAACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR GCA 72 bp | GTCACAAGGCCACCAGAACCACAACCAGGAAGATGTTaGCCTACTTGGTCATTCTTGGGTGGAAAGGACGAG | + |
|
Preference number: 3 (lower is better) Translates to: VTRPPEPQPGRC*PTWSFLGGKDE Trigger: CTCGTCCTTTCCACCCAAGAATGACCAAGTAGGGCAACATCTTCCTGGTTGTGGTTCTGGTGGCCTTGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR GCA 72 bp | TCCTGCCTCCATCCTCCGGTGCTGAGGTTACAGATGTaGACTGCTGTACCCTATTCACACAGTTCTGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SCLHPPVLRLQM*TAVPYSHSSVN Trigger: GTTCACAGAACTGTGTGAATAGGGTACAGCAGTGCACATCTGTAACCTCAGCACCGGAGGATGGAGGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | ATTGCTATCAAGTACATTAGAGCGGTCACCACATGCTaGCACATTCAACAGCTCAGAGCCAGGCAGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: IAIKYIRAVTTC*HIQQLRARQPG Trigger: CCCTGGCTGCCTGGCTCTGAGCTGTTGAATGTGCCAGCATGTGGTGACCGCTCTAATGTACTTGATAGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | CCCATCTGTCTGCCTTCCTCCCAGCATTCACATGGCTaGACCAGGTTGCCCAATTTACTCCAAATTCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PICLPSSQHSHG*TRLPNLLQIQD Trigger: GTCCTGAATTTGGAGTAAATTGGGCAACCTGGTCCAGCCATGTGAATGCTGGGAGGAAGGCAGACAGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTTGTACTCCGCAGGTTGTTGTGGCCATGGGGGTGGACAGATCAGCACCAACAACCAGGAAGATGTaGCCCTACTTGGTCATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QSCTPQVVVAMGVDRSAPTTRKM*PYLVIL Trigger: AAGAATGACCAAGTAGGGCAACATCTTCCTGGTTGT...TGGTGCTGATCTGTCCACCCCCATGGCCACAACAACCTGCGGAGTACAAGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTTCCTCCCAGCATTCACATGGCTGGACCAGGTTGCCCAATTTACTCCAACTCCAGATCTCTCCTTaGCTCAAGTCTCCTACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LPSSQHSHGWTRLPNLLQLQISP*LKSPTS Trigger: ACTGGTAGGAGACTTGAGCAAAGGAGAGATCTGGAG...TTGGAGTAAATTGGGCAACCTGGTCCAGCCATGTGAATGCTGGGAGGAAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGTCTGCCTTCCTCCCAGCATTCACATGGCTGGACCAGGTTGCCCAATTTATATCCATGTCAGCCTTaGAGGATGAAGTCTTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ICLPSSQHSHGWTRLPNLYPCQP*RMKSWA Trigger: GGCCCAAGACTTCATCCTCAAAGGCTGACATGGATA...TAAATTGGGCAACCTGGTCCAGCCATGTGAATGCTGGGAGGAAGGCAGACAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR TCA 72 bp | ACAGGTCCCAAATCGAGCTGCAAATTTCTCCTCCTCTaGCCCAAGTCTGCTTCTGAACCCCTGTGTCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TGPKSSCKFLLL*PKSASEPLCQE Trigger: TTCCTGACACAGGGGTTCAGAAGCAGACTTGGGTCAGAGGAGGAGAAATTTGCAGCTCGATTTGGGACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR TCA 72 bp | ATGAGGAGTTTTAAGTTGGCGAATCCCAATTACTCATaGCATCCCACCCACCACTGCTGCACCACGCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: MRSFKLANPNYS*HPTHHCCTTLT Trigger: GGTCAGCGTGGTGCAGCAGTGGTGGGTGGGATGTCATGAGTAATTGGGATTCGCCAACTTAAAACTCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR GCA 72 bp | TGCCTTCCTCCCAGCATTCACATGGCTGGACCAGGTTaGCCAATTTACTCCAAATTCAGGACTGTAAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CLPPSIHMAGPG*PIYSKFRTVSL Trigger: GAGGCTTACAGTCCTGAATTTGGAGTAAATTGGGCAACCTGGTCCAGCCATGTGAATGCTGGGAGGAAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | CCACCAGAACCACAACCAGGAAGATGTTGCCCTACTTaGTCATTCTTGGGTGGAAAGGACGAGGATTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PPEPQPGRCCPT*SFLGGKDEDFR Trigger: CCTGAAATCCTCGTCCTTTCCACCCAAGAATGACCAAGTAGGGCAACATCTTCCTGGTTGTGGTTCTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTAGATGAGGATCTCCTGTCACGTTCCAGGCTCCTGAGAGATGCTGGCTGGTTTGAGGATGAAGTCTaGGGCCTCTCAATGATACAT | + |
|
Preference number: 3 (lower is better) Translates to: ELDEDLLSRSRLLRDAGWFEDEV*GLSMIH Trigger: ATGTATCATTGAGAGGCCCAAGACTTCATCCTCAAA...CCAGCCAGCATCTCTCAGGAGCCTGGAACGTGACAGGAGATCCTCATCTAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR TCA 72 bp | CTGCAAATTTCTCCTCCTCTGACCCAAGTCTGCTTCTaGACCCCTGTGTCAGGAAAGGCAGTGCTAATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LQISPPLTQVCF*TPVSGKAVLIS Trigger: GGAAATTAGCACTGCCTTTCCTGACACAGGGGTTCAGAAGCAGACTTGGGTCAGAGGAGGAGAAATTTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR GCA 72 bp | ATTTGTGCTGCCTCTTCTCCCGGACCTTGGGCAGCTTaGTTTCTGGGTTATTCTGTAGGGCTTTGTTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ICAASSPGPWAA*FLGYSVGLCFC Trigger: ACAGAAACAAAGCCCTACAGAATAACCCAGAAAGCAAGCTGCCCAAGGTCCGGGAGAAGAGGCAGCACAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR GCA 72 bp | CTGGACAATCCAGGTATCCCCTCCAGATCTCTCCTTTaGTCAAGTCTCCTACCAGTGTGGCATCTCTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LDNPGIPSRSLL*SSLLPVWHLCL Trigger: TAAACAGAGATGCCACACTGGTAGGAGACTTGAGCAAAGGAGAGATCTGGAGGGGATACCTGGATTGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | CACAACCAGGAAGATGTTGCCCTACTTGGTCATTCTTaGGTGGAAAGGACGAGGATTTCAGGGGGAGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: HNQEDVALLGHS*VERTRISGGEH Trigger: ATGTTCTCCCCCTGAAATCCTCGTCCTTTCCACCCAAGAATGACCAAGTAGGGCAACATCTTCCTGGTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | TTCCCTCAGCTTCTTCCTTGGCACAGAGATGTTCTTTaGGCCCCATATCCATGTCAGCCTTTGAGGATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FPQLLPWHRDVL*APYPCQPLRMK Trigger: CTTCATCCTCAAAGGCTGACATGGATATGGGGCCCAAAGAACATCTCTGTGCCAAGGAAGAAGCTGAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | CCCAATTTACTCCAAATTCAGGACTGTAAGCCTCACTaGTACTCTGCCAGTTCCCCTTCCAGAAGGCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: PNLLQIQDCKPH*YSASSPSRRPY Trigger: GTAAGGCCTTCTGGAAGGGGAACTGGCAGAGTACCAGTGAGGCTTACAGTCCTGAATTTGGAGTAAATTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR TCA 72 bp | TGTCAGCCTTTGAGGATGAAGTCTTGGGCCTCTCAATaGTACATCTGGACAATCCAGGTATCCCCTCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CQPLRMKSWASQ*YIWTIQVSPPD Trigger: ATCTGGAGGGGATACCTGGATTGTCCAGATGTATCATTGAGAGGCCCAAGACTTCATCCTCAAAGGCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | AGCAAATCTTTAAGGGAGGGAAAAGCAAGCTTCAGATaGTGGCTGACTGAAGCGCTGCTGTCACTCCCAATT | + |
|
Preference number: 3 (lower is better) Translates to: SKSLREGKASFR*WLTEALLSLPI Trigger: AATTGGGAGTGACAGCAGCGCTTCAGTCAGCCACCATCTGAAGCTTGCTTTTCCCTCCCTTAAAGATTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | GATGTGCACTGCTGTACCCTATTCACACAGTTCTGTGAACCCAACCAGGACTTCGAAGAAAGATTCCCATaGTTCCAGAAATGTCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DVHCCTLFTQFCEPNQDFEERFP*FQKCPC Trigger: ACAGGGACATTTCTGGAACAATGGGAATCTTTCTTC...GAAGTCCTGGTTGGGTTCACAGAACTGTGTGAATAGGGTACAGCAGTGCACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | TATGCATCAGAGATTATTTGTCTGTGTGGTGACATCAGTCTAGCAGTAAGATTTCTCTTCTCCCGGACCTaGGGCAGCTTGCTTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: YASEIICLCGDISLAVRFLFSRT*GSLLSG Trigger: CCCAGAAAGCAAGCTGCCCAAGGTCCGGGAGAAGAG...AAATCTTACTGCTAGACTGATGTCACCACACAGACAAATAATCTCTGATGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCCCTCTTTGGGTCTTTTGTAGTCTCTGGAGGGACTGAGCTGGTCAGACACATGAGGAGTTTTAAGTaGGCGAATCCCAATTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSLFGSFVVSGGTELVRHMRSFK*ANPNYS Trigger: TGAGTAATTGGGATTCGCCAACTTAAAACTCCTCAT...GTGTCTGACCAGCTCAGTCCCTCCAGAGACTACAAAAGACCCAAAGAGGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR GCA 72 bp | GCAAGCACTCTACAAACTGAGCTACCGCCCAGACTTTaGTTAAGAAAGCAAATCTTTAAGGGAGGGAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ASTLQTELPPRL*LRKQIFKGGKS Trigger: GCTTTTCCCTCCCTTAAAGATTTGCTTTCTTAAGCAAAGTCTGGGCGGTAGCTCAGTTTGTAGAGTGCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | AGAAGAAAGATTCCCATTGTTCCAGAAATGTCCCTGTaGCTCTCTTCCCTATTTAGCACGAGTGAAGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: RRKIPIVPEMSL*LSSLFSTSEVT Trigger: AGTGACTTCACTCGTGCTAAATAGGGAAGAGAGCCACAGGGACATTTCTGGAACAATGGGAATCTTTCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR TCA 72 bp | CTAGAGTCTGTGTCCCCTAAACTCAGGCAGAGATTATaGGGCAAAGGCATCTTAAGCAATATTCGATATACC | + |
|
Preference number: 3 (lower is better) Translates to: LESVSPKLRQRL*GKGILSNIRYT Trigger: GGTATATCGAATATTGCTTAAGATGCCTTTGCCTCATAATCTCTGCCTGAGTTTAGGGGACACAGACTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CCA 72 bp | ACGAGGATTTCAGGGGGAGAACATCATGTGTCATGTTaGACCAGCATGATAATTTCCTTCATCTTAAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: TRISGGEHHVSC*TSMIISFILRL Trigger: GAGTCTTAAGATGAAGGAAATTATCATGCTGGTCCAACATGACACATGATGTTCTCCCCCTGAAATCCTCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR TCA 72 bp | TCACGTTTATGCATCAGAGATTATTTGTCTGTGTGGTaGCATCAGTCTAGCAGTAAGATTTACACCCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SRLCIRDYLSVW*HQSSSKIYTPA Trigger: TGCTGGGGTGTAAATCTTACTGCTAGACTGATGTCACCACACAGACAAATAATCTCTGATGCATAAACGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | CTTTCCCAGCCCCGGCTCCCACCTCTGCGTGGCCTGTaGTCAGGATCCACAGGTCCCCTCTCCCTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSQPRLPPLRGL*SGSTGPLSLSR Trigger: TCTGCTGAGGGAGAGGGGACCTGTGGATCCTGACAACAGGCCACGCAGAGGTGGGAGCCGGGGCTGGGAAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCACCACGCTGACCCCATCTGTCTGCCTTCCTCCCAGCATTCACATGGCAGCCACAGCCAGGGATaGCAGGGCGTGATGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLHHADPICLPSSQHSHGSHSQG*QGVMGG Trigger: GCCTCCCATCACGCCCTGGCATCCCTGGCTGTGGCT...GCCATGTGAATGCTGGGAGGAAGGCAGACAGATGGGGTCAGCGTGGTGCAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | ACTCAGGTCAAGCCTGGGTATCACCAGGTCCTCCCCTaGACCTCCGAGTGCCCTCACAGCAGAGCCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQVKPGYHQVLP*TSECPHSRALL Trigger: GAGGAGGGCTCTGCTGTGAGGGCACTCGGAGGTCAAGGGGAGGACCTGGTGATACCCAGGCTTGACCTGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | GCTGGTCCTGGCTGGCACAGTCTTGTACTCCGCAGGTaGTTGTGGCCATGGGGGTGGACAGATCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGPGWHSLVLRR*LWPWGWTDQHQ Trigger: CTGGTGCTGATCTGTCCACCCCCATGGCCACAACAACCTGCGGAGTACAAGACTGTGCCAGCCAGGACCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | ACACATGGTCCCGTGCTGGTCCTGGCTGGCACAGTCTaGTACTCCGCAGGTTGTTGTGGCCATGGGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: THGPVLVLAGTV*YSAGCCGHGGG Trigger: TCCACCCCCATGGCCACAACAACCTGCGGAGTACAAGACTGTGCCAGCCAGGACCAGCACGGGACCATGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | ACAACCAAGCCTAGCACAGGAGGTGTTTGGGAGATGTaGCCCCCTCCCCTCTGGCTCACAGTGGAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TTKPSTGGVWEM*PPPLWLTVESC Trigger: GCAGCTCTCCACTGTGAGCCAGAGGGGAGGGGGCAACATCTCCCAAACACCTCCTGTGCTAGGCTTGGTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | GCTCCTGAGAGATGCTGGCTGGGAGGCATCAGAGGGTaGGGCAGAGCTCTGCGAGGGCTTTTAGAGCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: APERCWLGGIRG*GRALRGLLEHN Trigger: GTTGTGCTCTAAAAGCCCTCGCAGAGCTCTGCCCAACCCTCTGATGCCTCCCAGCCAGCATCTCTCAGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCACCACGCTGACCCCATCTGTCTGCCTTCCTCCCAGCATTCACATGGCTTCTCCCGGTACAGTTaGAGGCAGACAACTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLHHADPICLPSSQHSHGFSRYS*RQTTVW Trigger: CCACACAGTTGTCTGCCTGCAACTGTACCGGGAGAA...GCCATGTGAATGCTGGGAGGAAGGCAGACAGATGGGGTCAGCGTGGTGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CCA 90 bp | GCTCCCTTAACGCACATGCCTGGACAGACATGTCACAAGGCCACCAGAACCACATCTATCCGGGGACCCTaGCGCAGGCTGCGAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: APLTHMPGQTCHKATRTTSIRGP*RRLRMI Trigger: GATCATTCGCAGCCTGCGCCAGGGTCCCCGGATAGA...TGTGGTTCTGGTGGCCTTGTGACATGTCTGTCCAGGCATGTGCGTTAAGGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CCA 90 bp | GATGTTGCCCCCTCCCCTCTGGCTCACAGTGGAGAGCTGCATGTGGCTTTAGGGTCAGGGAGCTCTCGTTaGTTTTCCCTTCGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DVAPSPLAHSGELHVALGSGSSR*FSLRSW Trigger: CCAGCTTCGAAGGGAAAACCAACGAGAGCTCCCTGA...CCCTAAAGCCACATGCAGCTCTCCACTGTGAGCCAGAGGGGAGGGGGCAACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | GGTCCTGGCTGGCACAGTCTTGTACTCCGCAGGTTGTaGTGGCCATGGGGGTGGACAGATCAGCACCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GPGWHSLVLRRL*WPWGWTDQHQI Trigger: TATCTGGTGCTGATCTGTCCACCCCCATGGCCACAACAACCTGCGGAGTACAAGACTGTGCCAGCCAGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR GCA 90 bp | TGCCCCCTCTGTCCCTCCTGTCACAGACTGCGGTACTCTTGTCCCTTTGCTCTTTGCTGCAGAGCAAGTTaGACAAGGCGTGGCGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: CPLCPSCHRLRYSCPFALCCRAS*TRRGGT Trigger: AGTTCCGCCACGCCTTGTGCAACTTGCTCTGCAGCA...AAGAGCAAAGGGACAAGAGTACCGCAGTCTGTGACAGGAGGGACAGAGGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CCA 90 bp | GCCCTCCCCAGCACAGCTTCTCAACGACTCAGGTCAAGCCTGGGTATCACCAGGTGGGATCTCCCCAAATaGCCAGTGATTCCCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALPSTASQRLRSSLGITRWDLPK*PVIPRE Trigger: TTCTCTGGGAATCACTGGCCATTTGGGGAGATCCCA...CCTGGTGATACCCAGGCTTGACCTGAGTCGTTGAGAAGCTGTGCTGGGGAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | CAGCTTCTCACGAGACTAACCTTCCTGTCTGGGTCTTaGCCCCCTCTGTCAACAGGAGGAGCTGAGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLLTRLTFLSGS*PPLSTGGAEPR Trigger: TCTGGGCTCAGCTCCTCCTGTTGACAGAGGGGGCAAAGACCCAGACAGGAAGGTTAGTCTCGTGAGAAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR TCA 90 bp | ATCTGTCTGCCTTCCTCCCAGCATTCACATGGCTGGACCAGGTTGCCCAATTTACCACAGCCAGGTGCATaGGGAAGACATTGGCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ICLPSSQHSHGWTRLPNLPQPGA*GRHWPE Trigger: CTCCGGCCAATGTCTTCCTCATGCACCTGGCTGTGG...TAAATTGGGCAACCTGGTCCAGCCATGTGAATGCTGGGAGGAAGGCAGACAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CCA 90 bp | CTGCCTTCCTCCCAGCATTCACATGGCTGGACCAGGTTGCCCAATTTACTCCAAGCCAGTGAGTCGGCATaGGATCTCCCCAAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSSQHSHGWTRLPNLLQASESA*DLPKWP Trigger: TGGCCATTTGGGGAGATCCCATGCCGACTCACTGGC...TTGGAGTAAATTGGGCAACCTGGTCCAGCCATGTGAATGCTGGGAGGAAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CCA 90 bp | CAGTCTTGTACTCCGCAGGTTGTTGTGGCCATGGGGGTGGACAGATCAGCACCAAAGTTGCACAAGGCGTaGCGGAACTTCTCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QSCTPQVVVAMGVDRSAPKLHKA*RNFSAT Trigger: TGTGGCTGAGAAGTTCCGCCACGCCTTGTGCAACTT...TGGTGCTGATCTGTCCACCCCCATGGCCACAACAACCTGCGGAGTACAAGACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | GTCCCTCCTGTCACAGACTGCGGTACTCTTGTCCCTTaGCTCTTCTGTCGAAGAGACACATGGTCCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPPVTDCGTLVP*LFCRRDTWSRA Trigger: AGCACGGGACCATGTGTCTCTTCGACAGAAGAGCAAAGGGACAAGAGTACCGCAGTCTGTGACAGGAGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR TCA 90 bp | GCTCCCTTAACGCACATGCCTGGACAGACATGTCACAAGGCCACCAGAACCACAACTTGTGGTCCCATATaGAAAGCCACAGGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: APLTHMPGQTCHKATRTTTCGPI*KATGPE Trigger: CTCTGGCCCTGTGGCTTTTCATATGGGACCACAAGT...TGTGGTTCTGGTGGCCTTGTGACATGTCTGTCCAGGCATGTGCGTTAAGGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | GATTCGCTGAGACTGGATGGCCTTGCAGTTGAGGCCTaGAAGCAGGGTGAGAACTCCCGATGTTTCCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DSLRLDGLAVEA*KQGENSRCFRL Trigger: CAAACGGAAACATCGGGAGTTCTCACCCTGCTTCAAGGCCTCAACTGCAAGGCCATCCAGTCTCAGCGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR TCA 90 bp | TCTGGACAATCCAGGTATCCCCTCCAGATCTCTCCTTTGCTCAAGTCTCCTACCGGACGGCTTTATTCTTaGGGTGCTTCTCTATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGQSRYPLQISPLLKSPTGRLYS*GASLSG Trigger: CCCGGATAGAGAAGCACCTCAAGAATAAAGCCGTCC...GGTAGGAGACTTGAGCAAAGGAGAGATCTGGAGGGGATACCTGGATTGTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCTCTTTGGGTCTTTTGTAGTCTCTGGAGGGACTGAGCTGGTCAGACACGTGAAGCACATAGACTaGACGGTGGATGTGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLFGSFVVSGGTELVRHVKHID*TVDVVG Trigger: CCCTACCACATCCACCGTTCAGTCTATGTGCTTCAC...GTGTCTGACCAGCTCAGTCCCTCCAGAGACTACAAAAGACCCAAAGAGGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCTCTTTGGGTCTTTTGTAGTCTCTGGAGGGACTGAGCTGGTCAGACACACTGTGTGGTTGGTCTaGACTGTCTGTGGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSLFGSFVVSGGTELVRHTVWLV*TVCGLT Trigger: AGTCAGCCCACAGACAGTGCAGACCAACCACACAGT...GTGTCTGACCAGCTCAGTCCCTCCAGAGACTACAAAAGACCCAAAGAGGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR TCA 90 bp | CAAGGCCACCAGAACCACAACCAGGAAGATGTTGCCCTACTTGGTCATTCTTGGCCACAAAAGCGAGGATaGAGTCCAGAAGGTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGHQNHNQEDVALLGHSWPQKRG*SPEGRS Trigger: GCTTCTACCTTCTGGACTTCATCCTCGCTTTTGTGG...CCAAGAATGACCAAGTAGGGCAACATCTTCCTGGTTGTGGTTCTGGTGGCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCTCTTTGGGTCTTTTGTAGTCTCTGGAGGGACTGAGCTGGTCAGACACAGGCAGACAACTGTGTaGTTGGTCTGCACTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLFGSFVVSGGTELVRHRQTTV*LVCTVC Trigger: ACAGACAGTGCAGACCAACCACACAGTTGTCTGCCT...GTGTCTGACCAGCTCAGTCCCTCCAGAGACTACAAAAGACCCAAAGAGGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | CATTTGTGCTGCCTCTTCTCCCGGACCTTGGGCAGCTaGCTTTCTGGGTTATTCTGTAGGGCTTTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLCCLFSRTLGS*LSGLFCRALFL Trigger: CAGAAACAAAGCCCTACAGAATAACCCAGAAAGCAAGCTGCCCAAGGTCCGGGAGAAGAGGCAGCACAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | CTGCCTTCCTCCCAGCATTCACATGGCTGGACCAGGTaGCCCAATTTACTCCAAATTCAGGACTGTAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSSQHSHGWTR*PNLLQIQDCKP Trigger: AGGCTTACAGTCCTGAATTTGGAGTAAATTGGGCAACCTGGTCCAGCCATGTGAATGCTGGGAGGAAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR TCA 90 bp | TATGCATCAGAGATTATTTGTCTGTGTGGTGACATCAGTCTAGCAGTAAGATTTAGGGATGCCAGGGCGTaGTGGGAGGCCTTCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: YASEIICLCGDISLAVRFRDARA*WEAFSR Trigger: CCGGGAGAAGGCCTCCCATCACGCCCTGGCATCCCT...AAATCTTACTGCTAGACTGATGTCACCACACAGACAAATAATCTCTGATGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTCCGTCCATGCCATATGCCTGACTAGGCCACATTCTAATGACAAGCTCGGAGTGCCTGACTTGTaGTCCCATATGAAAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLSVHAICLTRPHSNDKLGVPDL*SHMKSH Trigger: GTGGCTTTTCATATGGGACCACAAGTCAGGCACTCC...GAGCTTGTCATTAGAATGTGGCCTAGTCAGGCATATGGCATGGACGGACAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | TCTGGACAATCCAGGTATCCCCTCCAGATCTCTCCTTaGCTCAAGTCTCCTACCAGTGTGGCATCTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGQSRYPLQISP*LKSPTSVASLF Trigger: AAACAGAGATGCCACACTGGTAGGAGACTTGAGCAAAGGAGAGATCTGGAGGGGATACCTGGATTGTCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | CTTCCCTCAGCTTCTTCCTTGGCACAGAGATGTTCTTaGGGCCCCATATCCATGTCAGCCTTTGAGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPSASSLAQRCS*GPISMSAFEDE Trigger: TTCATCCTCAAAGGCTGACATGGATATGGGGCCCAAAGAACATCTCTGTGCCAAGGAAGAAGCTGAGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CCA 90 bp | TATGCATCAGAGATTATTTGTCTGTGTGGTGACATCAGTCTAGCAGTAAGATTTTTCGAAGCTGGGAGGTaGACCTGTGAGCCGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YASEIICLCGDISLAVRFFEAGR*TCEPFA Trigger: AGCAAACGGCTCACAGGTCCACCTCCCAGCTTCGAA...AAATCTTACTGCTAGACTGATGTCACCACACAGACAAATAATCTCTGATGCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | GACGAGGATTTCAGGGGGAGAACATCATGTGTCATGTaGGACCAGCATGATAATTTCCTTCATCTTAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: DEDFRGRTSCVM*DQHDNFLHLKT Trigger: AGTCTTAAGATGAAGGAAATTATCATGCTGGTCCAACATGACACATGATGTTCTCCCCCTGAAATCCTCGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| 3UTR CAA 72 bp | TTCCTTCATCTTAAGACTCAGTTATGTTTAAGAGTATaGCTATCAAGTACATTAGAGCGGTCACCACATGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLHLKTQLCLRV*LSSTLERSPHA Trigger: AGCATGTGGTGACCGCTCTAATGTACTTGATAGCAATACTCTTAAACATAACTGAGTCTTAAGATGAAGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS GCA 90 bp | GCCTTCTCCCGGTACAGTTGCAGGCAGACAACTGTGTGGTTGGTCTaGACTGTCTGTGGGCTGACTAGCAGTGGGGCCATAGCCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AFSRYSCRQTTVWLV*TVCGLTSSGAIATA Trigger: GGCTGTGGCTATGGCCCCACTGCTAGTCAGCCCACAGACAGTGCAGACCAACCACACAGTTGTCTGCCTGCAACTGTACCGGGAGAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS GCA 90 bp | GGTGACCGTGGTGATGAATGGGAAGGTAAAAGCCACAGCCAGGGATaGCAGGGCGTGATGGGAGGCCTTCTCCCGGTACAGTTGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GDRGDEWEGKSHSQG*QGVMGGLLPVQLQA Trigger: TGCCTGCAACTGTACCGGGAGAAGGCCTCCCATCACGCCCTGGCATCCCTGGCTGTGGCTTTTACCTTCCCATTCATCACCACGGTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CAA 90 bp | AGAACGCAGGCAGGTGAGCCAGCTGCAGTCATGGGCAGAGAGGAGGACCCCTTGCTTCTCCCGGTACAGTaGCAGGCAGACAACTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RTQAGEPAAVMGREEDPLLLPVQ*QADNCV Trigger: CACACAGTTGTCTGCCTGCAACTGTACCGGGAGAAG...CAAGGGGTCCTCCTCTCTGCCCATGACTGCAGCTGGCTCACCTGCCTGCGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS TCA 90 bp | GTCGGCCACAGCCAGGTGCATGAGGAAGACATTGGCCGGAGTGCCTaGCTTGTGGTCCCATATGAAAAGCCACAGGGCCAGAGCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGHSQVHEEDIGRSA*LVVPYEKPQGQSIA Trigger: GGCAATGCTCTGGCCCTGTGGCTTTTCATATGGGACCACAAGTCAGGCACTCCGGCCAATGTCTTCCTCATGCACCTGGCTGTGGCCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS TCA 90 bp | GGGAGCTCTCGTTGGTTTTCCCTTCGAAGCTGGGAGGTGGACCTGTaGGCCGTTTGCTGCAGAGCAAGTTGCACAAGGCGTGGCGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: GSSRWFSLRSWEVDL*AVCCRASCTRRGGT Trigger: AGTTCCGCCACGCCTTGTGCAACTTGCTCTGCAGCAAACGGCTCACAGGTCCACCTCCCAGCTTCGAAGGGAAAACCAACGAGAGCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS CCA 90 bp | GGCACTCAGGGAGCTCTCGTTGGTTTTCCCTTCGAAGCTGGGAGGTaGACCTGTGAGCCGTTTGCTGCAGAGCAAGTTGCACAAGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GTQGALVGFPFEAGR*TCEPFAAEQVAQGV Trigger: CACGCCTTGTGCAACTTGCTCTGCAGCAAACGGCTCACAGGTCCACCTCCCAGCTTCGAAGGGAAAACCAACGAGAGCTCCCTGAGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CAA 90 bp | GCTCCCTTAACGCACATGCCTGGACAGACATGTCACAAGGCCACCAGAACCACACACAGGGCCAGAGCATaGCCCACAAAAGCGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: APLTHMPGQTCHKATRTTHRARA*PTKARM Trigger: CATCCTCGCTTTTGTGGGCAATGCTCTGGCCCTGTG...TGTGGTTCTGGTGGCCTTGTGACATGTCTGTCCAGGCATGTGCGTTAAGGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS GCA 90 bp | ATGGCCAGAACCATAGCAATCATGCGGACGGCTTTATTCTTGAGGTaGTTCTCTATCCGGGGACCCTGGCGCAGGCTGCGAATGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MARTIAIMRTALFLR*FSIRGPWRRLRMIS Trigger: GCTGATCATTCGCAGCCTGCGCCAGGGTCCCCGGATAGAGAAGCACCTCAAGAATAAAGCCGTCCGCATGATTGCTATGGTTCTGGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS CCA 90 bp | GGTGGACCTGTGAGCCGTTTGCTGCAGAGCAAGTTGCACAAGGCGTaGCGGAACTTCTCAGCCACAAAGAAGTACATGACAGGATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGPVSRLLQSKLHKA*RNFSATKKYMTGSR Trigger: CCTGGATCCTGTCATGTACTTCTTTGTGGCTGAGAAGTTCCGCCACGCCTTGTGCAACTTGCTCTGCAGCAAACGGCTCACAGGTCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CAA 90 bp | TGCCCCCTCTGTCCCTCCTGTCACAGACTGCGGTACTCTTGTCCCTTTGCTCTTCGGACGGCTTTATTCTaGAGGTGCTTCTCTATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CPLCPSCHRLRYSCPFALRTALF*RCFSIR Trigger: CCGGATAGAGAAGCACCTCAAGAATAAAGCCGTCCG...AAGAGCAAAGGGACAAGAGTACCGCAGTCTGTGACAGGAGGGACAGAGGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS CCA 90 bp | ACAGCCAGGTGCATGAGGAAGACATTGGCCGGAGTGCCTGACTTGTaGTCCCATATGAAAAGCCACAGGGCCAGAGCATTGCCCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TARCMRKTLAGVPDL*SHMKSHRARALPTK Trigger: TTTTGTGGGCAATGCTCTGGCCCTGTGGCTTTTCATATGGGACCACAAGTCAGGCACTCCGGCCAATGTCTTCCTCATGCACCTGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS TCA 90 bp | AGCAGCGCACGAAGTCCCACCACCACGGTAGTGAAGCACATAGACTaGACGGTGGATGTGGTAGGGCACAAAACAAATCAGGAAGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSARSPTTTVVKHID*TVDVVGHKTNQEDG Trigger: GCCATCTTCCTGATTTGTTTTGTGCCCTACCACATCCACCGTTCAGTCTATGTGCTTCACTACCGTGGTGGTGGGACTTCGTGCGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS CCA 90 bp | CAGATAGAAGAGGAAGCCAGTGAGTCGGCATGGGATCTCCCCAAATaGCCAGTGATTCCCAGAGAAGTGATAAACCAACCGGGTAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QIEEEASESAWDLPK*PVIPREVINQPGRQ Trigger: CTGCCTACCCGGTTGGTTTATCACTTCTCTGGGAATCACTGGCCATTTGGGGAGATCCCATGCCGACTCACTGGCTTCCTCTTCTATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CAA 90 bp | GATGTGCACTGCTGTACCCTATTCACACAGTTCTGTGAACCCAACCAGGACTTCCGAAGCTTGAGGGACTaGACAGGGTGCACAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DVHCCTLFTQFCEPNQDFRSLRD*TGCTMA Trigger: GGCCATTGTGCACCCTGTCAAGTCCCTCAAGCTTCG...GAAGTCCTGGTTGGGTTCACAGAACTGTGTGAATAGGGTACAGCAGTGCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CAA 90 bp | TCTTCCCTCTTTGGGTCTTTTGTAGTCTCTGGAGGGACTGAGCTGGTCAGACACAGAGGTCTTCGAAGCTaGAGGGACTTGACAGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLFGSFVVSGGTELVRHRGLRS*RDLTGC Trigger: GCACCCTGTCAAGTCCCTCAAGCTTCGAAGACCTCT...GTGTCTGACCAGCTCAGTCCCTCCAGAGACTACAAAAGACCCAAAGAGGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS-3UTR CAA 90 bp | GATGTGCACTGCTGTACCCTATTCACACAGTTCTGTGAACCCAACCAGGACTTCTTGCTGCAGAGCAAGTaGCACAAGGCGTGGCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DVHCCTLFTQFCEPNQDFLLQSK*HKAWRN Trigger: GTTCCGCCACGCCTTGTGCAACTTGCTCTGCAGCAA...GAAGTCCTGGTTGGGTTCACAGAACTGTGTGAATAGGGTACAGCAGTGCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS CAA 90 bp | AGCCAGGGATGCCAGGGCGTGATGGGAGGCCTTCTCCCGGTACAGTaGCAGGCAGACAACTGTGTGGTTGGTCTGCACTGTCTGTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SQGCQGVMGGLLPVQ*QADNCVVGLHCLWA Trigger: AGCCCACAGACAGTGCAGACCAACCACACAGTTGTCTGCCTGCAACTGTACCGGGAGAAGGCCTCCCATCACGCCCTGGCATCCCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS CAA 90 bp | TGGGAGGCCTTCTCCCGGTACAGTTGCAGGCAGACAACTGTGTGGTaGGTCTGCACTGTCTGTGGGCTGACTAGCAGTGGGGCCATAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WEAFSRYSCRQTTVW*VCTVCGLTSSGAIA Trigger: GGCTATGGCCCCACTGCTAGTCAGCCCACAGACAGTGCAGACCAACCACACAGTTGTCTGCCTGCAACTGTACCGGGAGAAGGCCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS CAA 72 bp | TGCCAGGGCGTGATGGGAGGCCTTCTCCCGGTACAGTaGCAGGCAGACAACTGTGTGGTTGGTCTGCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: CQGVMGGLLPVQ*QADNCVVGLHC Trigger: ACAGTGCAGACCAACCACACAGTTGTCTGCCTGCAACTGTACCGGGAGAAGGCCTCCCATCACGCCCTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS CAA 72 bp | TTCCCTTCGAAGCTGGGAGGTGGACCTGTGAGCCGTTaGCTGCAGAGCAAGTTGCACAAGGCGTGGCGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FPSKLGGGPVSR*LQSKLHKAWRN Trigger: GTTCCGCCACGCCTTGTGCAACTTGCTCTGCAGCAAACGGCTCACAGGTCCACCTCCCAGCTTCGAAGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS CAA 90 bp | GCCACAGCCAGGTGCATGAGGAAGACATTGGCCGGAGTGCCTGACTaGTGGTCCCATATGAAAAGCCACAGGGCCAGAGCATTGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: ATARCMRKTLAGVPD*WSHMKSHRARALPT Trigger: TGTGGGCAATGCTCTGGCCCTGTGGCTTTTCATATGGGACCACAAGTCAGGCACTCCGGCCAATGTCTTCCTCATGCACCTGGCTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS CAA 90 bp | TCGTTGGTTTTCCCTTCGAAGCTGGGAGGTGGACCTGTGAGCCGTTaGCTGCAGAGCAAGTTGCACAAGGCGTGGCGGAACTTCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLVFPSKLGGGPVSR*LQSKLHKAWRNFSA Trigger: GGCTGAGAAGTTCCGCCACGCCTTGTGCAACTTGCTCTGCAGCAAACGGCTCACAGGTCCACCTCCCAGCTTCGAAGGGAAAACCAACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS CAA 72 bp | GGAGGTGGACCTGTGAGCCGTTTGCTGCAGAGCAAGTaGCACAAGGCGTGGCGGAACTTCTCAGCCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GGGPVSRLLQSK*HKAWRNFSATK Trigger: CTTTGTGGCTGAGAAGTTCCGCCACGCCTTGTGCAACTTGCTCTGCAGCAAACGGCTCACAGGTCCACCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS TCA 72 bp | AGCCAGGTGCATGAGGAAGACATTGGCCGGAGTGCCTaGCTTGTGGTCCCATATGAAAAGCCACAGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SQVHEEDIGRSA*LVVPYEKPQGQ Trigger: CTGGCCCTGTGGCTTTTCATATGGGACCACAAGTCAGGCACTCCGGCCAATGTCTTCCTCATGCACCTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS TCA 72 bp | CGTTGGTTTTCCCTTCGAAGCTGGGAGGTGGACCTGTaGGCCGTTTGCTGCAGAGCAAGTTGCACAAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: RWFSLRSWEVDL*AVCCRASCTRR Trigger: ACGCCTTGTGCAACTTGCTCTGCAGCAAACGGCTCACAGGTCCACCTCCCAGCTTCGAAGGGAAAACCAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS GCA 72 bp | CGGTACAGTTGCAGGCAGACAACTGTGTGGTTGGTCTaGACTGTCTGTGGGCTGACTAGCAGTGGGGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: RYSCRQTTVWLV*TVCGLTSSGAI Trigger: TATGGCCCCACTGCTAGTCAGCCCACAGACAGTGCAGACCAACCACACAGTTGTCTGCCTGCAACTGTACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS GCA 72 bp | ACCATAGCAATCATGCGGACGGCTTTATTCTTGAGGTaGTTCTCTATCCGGGGACCCTGGCGCAGGCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: TIAIMRTALFLR*FSIRGPWRRLR Trigger: TCGCAGCCTGCGCCAGGGTCCCCGGATAGAGAAGCACCTCAAGAATAAAGCCGTCCGCATGATTGCTATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
||
| CDS CCA 72 bp | GCCTTCTCCCGGTACAGTTGCAGGCAGACAACTGTGTaGTTGGTCTGCACTGTCTGTGGGCTGACTAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: AFSRYSCRQTTV*LVCTVCGLTSS Trigger: ACTGCTAGTCAGCCCACAGACAGTGCAGACCAACCACACAGTTGTCTGCCTGCAACTGTACCGGGAGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| CDS CCA 72 bp | GGAGCTCTCGTTGGTTTTCCCTTCGAAGCTGGGAGGTaGACCTGTGAGCCGTTTGCTGCAGAGCAAGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: GALVGFPFEAGR*TCEPFAAEQVA Trigger: TGCAACTTGCTCTGCAGCAAACGGCTCACAGGTCCACCTCCCAGCTTCGAAGGGAAAACCAACGAGAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| CDS CAA 72 bp | TTCTCCCGGTACAGTTGCAGGCAGACAACTGTGTGGTaGGTCTGCACTGTCTGTGGGCTGACTAGCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: FSRYSCRQTTVW*VCTVCGLTSSG Trigger: CCCACTGCTAGTCAGCCCACAGACAGTGCAGACCAACCACACAGTTGTCTGCCTGCAACTGTACCGGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| CDS CAA 90 bp | AGGAAGATGGCCAGAACCATAGCAATCATGCGGACGGCTTTATTCTaGAGGTGCTTCTCTATCCGGGGACCCTGGCGCAGGCTGCGAATG | + |
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Preference number: 6 (lower is better) Translates to: RKMARTIAIMRTALF*RCFSIRGPWRRLRM Trigger: CATTCGCAGCCTGCGCCAGGGTCCCCGGATAGAGAAGCACCTCAAGAATAAAGCCGTCCGCATGATTGCTATGGTTCTGGCCATCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| CDS CAA 90 bp | TCGAAGCTGGGAGGTGGACCTGTGAGCCGTTTGCTGCAGAGCAAGTaGCACAAGGCGTGGCGGAACTTCTCAGCCACAAAGAAGTACATG | + |
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Preference number: 6 (lower is better) Translates to: SKLGGGPVSRLLQSK*HKAWRNFSATKKYM Trigger: CATGTACTTCTTTGTGGCTGAGAAGTTCCGCCACGCCTTGTGCAACTTGCTCTGCAGCAAACGGCTCACAGGTCCACCTCCCAGCTTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| CDS TCA 72 bp | GCCACAGGGCCAGAGCATTGCCCACAAAAGCGAGGATaGAGTCCAGAAGGTAGAAGCAGGCGAAGAGCATGT | + |
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Preference number: 6 (lower is better) Translates to: ATGPEHCPQKRG*SPEGRSRRRAC Trigger: ACATGCTCTTCGCCTGCTTCTACCTTCTGGACTTCATCCTCGCTTTTGTGGGCAATGCTCTGGCCCTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| CDS CCA 72 bp | AATGATCAGCAGGTAGCAGGTGACCGTGGTGATGAATaGGAAGGTAAAAGCCACAGCCAGGGATGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: NDQQVAGDRGDE*EGKSHSQGCQG Trigger: GCCCTGGCATCCCTGGCTGTGGCTTTTACCTTCCCATTCATCACCACGGTCACCTGCTACCTGCTGATCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| CDS CAA 72 bp | AGGTGCATGAGGAAGACATTGGCCGGAGTGCCTGACTaGTGGTCCCATATGAAAAGCCACAGGGCCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: RCMRKTLAGVPD*WSHMKSHRARA Trigger: TGCTCTGGCCCTGTGGCTTTTCATATGGGACCACAAGTCAGGCACTCCGGCCAATGTCTTCCTCATGCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| CDS CCA 72 bp | GTGAGCCGTTTGCTGCAGAGCAAGTTGCACAAGGCGTaGCGGAACTTCTCAGCCACAAAGAAGTACATGACA | + |
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Preference number: 6 (lower is better) Translates to: VSRLLQSKLHKA*RNFSATKKYMT Trigger: TGTCATGTACTTCTTTGTGGCTGAGAAGTTCCGCCACGCCTTGTGCAACTTGCTCTGCAGCAAACGGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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| CDS TCA 72 bp | CGAAGTCCCACCACCACGGTAGTGAAGCACATAGACTaGACGGTGGATGTGGTAGGGCACAAAACAAATCAG | + |
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Preference number: 6 (lower is better) Translates to: RSPTTTVVKHID*TVDVVGHKTNQ Trigger: CTGATTTGTTTTGTGCCCTACCACATCCACCGTTCAGTCTATGTGCTTCACTACCGTGGTGGTGGGACTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064016.6 |
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