Pregenerated sensors for GPR165 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031210Ensembl transcript IDs: ENSMUST00000033554.5
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTAAGGCTAGGAAAGGGGTaGGACCAGTGGGAGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: TMIALYPNFSCLNRRRRLRLGKG*DQWEAK Trigger: CTTGGCCTCCCACTGGTCTCACCCCTTTCCTAGCCT...TAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR-3UTR TCA 90 bp | CACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTGGAGGCCAAGGATACTaGGGAAGAGACAAAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: HNDSPLPKFLLSKQEKKAGGQGY*GRDKEE Trigger: TTCTTCTTTGTCTCTTCCTCAGTATCCTTGGCCTCC...AGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR-3UTR TCA 90 bp | ATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCAGAGAGTGAGAGAGGAAGATaGGTAGAAGGTAGAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: IALYPNFSCLNRRRRLSESERGR*VEGRAG Trigger: TCCTGCTCTACCTTCTACTCATCTTCCTCTCTCACT...CTCTGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR-3UTR TCA 90 bp | CACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTCACTCCCTCATTTCCTaGCCTAGACACTTGTCCATA | + |
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Preference number: 2 (lower is better) Translates to: HNDSPLPKFLLSKQEKKAHSLIS*PRHLSI Trigger: TATGGACAAGTGTCTAGGTCAGGAAATGAGGGAGTG...AGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR-3UTR TCA 90 bp | TTGTCCATACCTTACCAACCAACCAGGAGATATCACAGTAGAGACTGGATAACTAAGAAGAGAGGAATTTaGGGAGGACCACAAGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: LSIPYQPTRRYHSRDWITKKRGI*GGPQVQ Trigger: TTGAACTTGTGGTCCTCCTCAAATTCCTCTCTTCTT...AGTTATCCAGTCTCTACTGTGATATCTCCTGGTTGGTTGGTAAGGTATGGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR-3UTR TCA 90 bp | CACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCCTGGTATCATCTTaGTACATGCAACCATGGATG | + |
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Preference number: 2 (lower is better) Translates to: HNDSPLPKFLLSKQEKKAILVSS*YMQPWM Trigger: CATCCATGGTTGCATGTATCAAGATGATACCAGGAT...AGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR-3UTR GCA 90 bp | TTGTCCATACCTTACCAACCAACCAGGAGATATCACAGTAGAGACTGGATAACTTATCATCTTGATACATaGAACCATGGATGCTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LSIPYQPTRRYHSRDWITYHLDT*NHGCCP Trigger: TGGACAGCATCCATGGTTGCATGTATCAAGATGATA...AGTTATCCAGTCTCTACTGTGATATCTCCTGGTTGGTTGGTAAGGTATGGACAA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR-3UTR CCA 90 bp | ATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCAGAGGTTCAATTCTCATCCTaGTATCATCTTGATACATGC | + |
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Preference number: 2 (lower is better) Translates to: IALYPNFSCLNRRRRLSEVQFSS*YHLDTC Trigger: GCATGTATCAAGATGATACCAGGATGAGAATTGAAC...CTCTGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR-3UTR CCA 90 bp | ATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCATATCACAGTAGAGACTaGATAACTTGCCATTGTTAC | + |
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Preference number: 2 (lower is better) Translates to: MIALYPNFSCLNRRRRLSYHSRD*ITCHCY Trigger: GTAACAATGGCAAGTTATCCAGTCTCTACTGTGATA...TGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR TCA 72 bp | AGGACCACAAGTTCAATTCTCATCCTGGTATCATCTTaGTACATGCAACCATGGATGCTGTCCAAAGACCCT | + |
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Preference number: 3 (lower is better) Translates to: RTTSSILILVSS*YMQPWMLSKDP Trigger: AGGGTCTTTGGACAGCATCCATGGTTGCATGTATCAAGATGATACCAGGATGAGAATTGAACTTGTGGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR-3UTR CAA 90 bp | ACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTAGAAGAAGAGAGGAATTaGAGGAGGACCACAAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: TMIALYPNFSCLNRRRRLEEERN*RRTTSS Trigger: TGAACTTGTGGTCCTCCTCAAATTCCTCTCTTCTTC...TAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR-3UTR CAA 90 bp | ACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTAGAGATCACAGGTAGGTaGGCAGTTTACAATGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: TMIALYPNFSCLNRRRRLEITGR*AVYNGH Trigger: ATGACCATTGTAAACTGCCAACCTACCTGTGATCTC...TAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR-3UTR CAA 90 bp | ACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTAAAGCAAAATTCGACTTaGCCTTCTCCATGTGTGAAG | + |
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Preference number: 3 (lower is better) Translates to: TMIALYPNFSCLNRRRRLKQNST*PSPCVK Trigger: CTTCACACATGGAGAAGGCAAAGTCGAATTTTGCTT...TAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR GCA 72 bp | TCATCCTGGTATCATCTTGATACATGCAACCATGGATaGTGTCCAAAGACCCTTAAAACATTATCTCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: SSWYHLDTCNHG*CPKTLKTLSPE Trigger: TTCTGGAGATAATGTTTTAAGGGTCTTTGGACAGCATCCATGGTTGCATGTATCAAGATGATACCAGGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR GCA 72 bp | CAAGTTCAATTCTCATCCTGGTATCATCTTGATACATaGAACCATGGATGCTGTCCAAAGACCCTTAAAACA | + |
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Preference number: 3 (lower is better) Translates to: QVQFSSWYHLDT*NHGCCPKTLKT Trigger: TGTTTTAAGGGTCTTTGGACAGCATCCATGGTTGCATGTATCAAGATGATACCAGGATGAGAATTGAACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR-3UTR CAA 90 bp | ATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCAATAAGCTTAGATATTTaGATAGTCAATCGCGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: MIALYPNFSCLNRRRRLSISLDI*IVNRGL Trigger: CAGACCGCGATTGACTATCAAAATATCTAAGCTTAT...TGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR TCA 90 bp | AGAACAGGGATAGGGGTGGGGAAGTGCTTTCTTCAGGAGGATAGAACGTTAGGTAGTTACATAGGCACATaGGTACTGGGCAAAGCGACT | + |
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Preference number: 4 (lower is better) Translates to: RTGIGVGKCFLQEDRTLGSYIGT*VLGKAT Trigger: AGTCGCTTTGCCCAGTACTCATGTGCCTATGTAACT...ACCTAACGTTCTATCCTCCTGAAGAAAGCACTTCCCCACCCCTATCCCTGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CCA 90 bp | TTGTCCATACCTTACCAACCAACCAGGAGATATCACAGTAGAGACTGGATAACTCGTCCCCAAAGCCCATaGTGCCAGGGCTCTGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: LSIPYQPTRRYHSRDWITRPQSP*CQGSGN Trigger: ATTTCCAGAGCCCTGGCACCATGGGCTTTGGGGACG...AGTTATCCAGTCTCTACTGTGATATCTCCTGGTTGGTTGGTAAGGTATGGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CCA 90 bp | AGAACAGGGATAGGGGTGGGGAAGTGCTTTCTTCAGGAGGATAGAACGTTAGGTAAAATCTCTGAATCGTaGGAATTTGGGCACTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RTGIGVGKCFLQEDRTLGKISES*EFGHSW Trigger: CCAGGAGTGCCCAAATTCCCACGATTCAGAGATTTT...ACCTAACGTTCTATCCTCCTGAAGAAAGCACTTCCCCACCCCTATCCCTGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CCA 90 bp | ACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTAGCTCTGGAAATCCTCTaGGGGCACGTCTGTGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: TMIALYPNFSCLNRRRRLALEIL*GHVCGW Trigger: CCAACCACAGACGTGCCCCCAGAGGATTTCCAGAGC...TAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CCA 90 bp | AGAACAGGGATAGGGGTGGGGAAGTGCTTTCTTCAGGAGGATAGAACGTTAGGTTGCACCTGCTCATCCTaGGATACAATTTCCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: RTGIGVGKCFLQEDRTLGCTCSS*DTISKS Trigger: AGATTTGGAAATTGTATCCCAGGATGAGCAGGTGCA...ACCTAACGTTCTATCCTCCTGAAGAAAGCACTTCCCCACCCCTATCCCTGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CCA 90 bp | ACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTAGGGAGGGAGGGGGACTaGGCAGCTCATCAAAATCTC | + |
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Preference number: 4 (lower is better) Translates to: TMIALYPNFSCLNRRRRLGREGD*AAHQNL Trigger: GAGATTTTGATGAGCTGCCCAGTCCCCCTCCCTCCC...TAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR TCA 90 bp | TATCATCTTGATACATGCAACCATGGATGCTGTCCAAAGACCCTTAAAACATTAGCATTGGATGCAGCCTaGAGCACCTGGGAGGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: YHLDTCNHGCCPKTLKTLALDAA*STWEVV Trigger: TACCACCTCCCAGGTGCTTCAGGCTGCATCCAATGC...TAATGTTTTAAGGGTCTTTGGACAGCATCCATGGTTGCATGTATCAAGATGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR TCA 90 bp | ACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTACAGGTCCCCCGAGTTTaGCATGTGGTCTGCCAACTT | + |
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Preference number: 4 (lower is better) Translates to: TMIALYPNFSCLNRRRRLQVPRV*HVVCQL Trigger: AAGTTGGCAGACCACATGTCAAACTCGGGGGACCTG...TAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR TCA 90 bp | TTGTCCATACCTTACCAACCAACCAGGAGATATCACAGTAGAGACTGGATAACTACTGGGCAAAGCGACTaGGGTGACATGTCATCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LSIPYQPTRRYHSRDWITTGQSD*GDMSSF Trigger: GAAAGATGACATGTCACCTCAGTCGCTTTGCCCAGT...AGTTATCCAGTCTCTACTGTGATATCTCCTGGTTGGTTGGTAAGGTATGGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| 3UTR CAA 72 bp | GAGGACCACAAGTTCAATTCTCATCCTGGTATCATCTaGATACATGCAACCATGGATGCTGTCCAAAGACCC | + |
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Preference number: 4 (lower is better) Translates to: EDHKFNSHPGII*IHATMDAVQRP Trigger: GGGTCTTTGGACAGCATCCATGGTTGCATGTATCAAGATGATACCAGGATGAGAATTGAACTTGTGGTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR GCA 90 bp | TTGTCCATACCTTACCAACCAACCAGGAGATATCACAGTAGAGACTGGATAACTAGAACAGCAGAAAGGTaGCCAGGTCAAGGTATTTCC | + |
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Preference number: 4 (lower is better) Translates to: LSIPYQPTRRYHSRDWITRTAER*PGQGIS Trigger: GGAAATACCTTGACCTGGGCACCTTTCTGCTGTTCT...AGTTATCCAGTCTCTACTGTGATATCTCCTGGTTGGTTGGTAAGGTATGGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR GCA 90 bp | ATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCAGAGAGCATCTTTAGGGTCTaGTTCTTCTTCCCACGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IALYPNFSCLNRRRRLSESIFRV*FFFPRW Trigger: CCAGCGTGGGAAGAAGAAGCAGACCCTAAAGATGCT...CTCTGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR TCA 90 bp | ACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTACAACTTATCCATCTTTaGCAGCATGCCATTGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: TMIALYPNFSCLNRRRRLQLIHL*QHAIAA Trigger: GGCCGCAATGGCATGCTGTCAAAGATGGATAAGTTG...TAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR TCA 90 bp | CACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTGCAAAGCGACTGAGGTaGCATGTCATCTTTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: HNDSPLPKFLLSKQEKKAAKRLR*HVIFPN Trigger: GTTTGGAAAGATGACATGTCACCTCAGTCGCTTTGC...AGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CCA 90 bp | ATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCATACACTCAGAGCTTCTaGAGTCAGCTCGTCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: MIALYPNFSCLNRRRRLSYTQSF*SQLVPK Trigger: TTTGGGGACGAGCTGACTCCAGAAGCTCTGAGTGTA...TGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CCA 90 bp | TTGTCCATACCTTACCAACCAACCAGGAGATATCACAGTAGAGACTGGATAACTTCATCAACAGCATCATaGATCCACAGCTTTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LSIPYQPTRRYHSRDWITSSTAS*IHSFLA Trigger: GGCCAAAAAGCTGTGGATCCATGATGCTGTTGATGA...AGTTATCCAGTCTCTACTGTGATATCTCCTGGTTGGTTGGTAAGGTATGGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CCA 90 bp | CACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTTTGAGATGGATTCACTaGACAGGAGCACCAGGTACA | + |
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Preference number: 4 (lower is better) Translates to: HNDSPLPKFLLSKQEKKALRWIH*TGAPGT Trigger: TGTACCTGGTGCTCCTGTCCAGTGAATCCATCTCAA...AGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CCA 90 bp | ATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCAGAGGGATTTAGAAGTATATaGGAAACTTGGGAGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: IALYPNFSCLNRRRRLSEGFRSI*ETWEAG Trigger: GCCTGCCTCCCAAGTTTCCCATATACTTCTAAATCC...CTCTGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CCA 90 bp | ATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCAGGATCCACAGCTTTTTaGCCACATGACCATAGACAG | + |
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Preference number: 4 (lower is better) Translates to: MIALYPNFSCLNRRRRLSGSTAF*PHDHRQ Trigger: CTGTCTATGGTCATGTGGCCAAAAAGCTGTGGATCC...TGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CCA 90 bp | TTGTCCATACCTTACCAACCAACCAGGAGATATCACAGTAGAGACTGGATAACTACTCTAGGCACTGAATaGAGAAAGGAGATTTCCACT | + |
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Preference number: 4 (lower is better) Translates to: LSIPYQPTRRYHSRDWITTLGTE*RKEIST Trigger: AGTGGAAATCTCCTTTCTCCATTCAGTGCCTAGAGT...AGTTATCCAGTCTCTACTGTGATATCTCCTGGTTGGTTGGTAAGGTATGGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR TCA 90 bp | GATACATGCAACCATGGATGCTGTCCAAAGACCCTTAAAACATTATCTCCAGAATACGGAAACTATCACTaGGCCAGCAATAAATGTAGG | + |
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Preference number: 4 (lower is better) Translates to: DTCNHGCCPKTLKTLSPEYGNYH*ASNKCR Trigger: CCTACATTTATTGCTGGCTCAGTGATAGTTTCCGTA...TTCTGGAGATAATGTTTTAAGGGTCTTTGGACAGCATCCATGGTTGCATGTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR TCA 90 bp | ACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTAGCTCATCAAAATCTCTaGATCGTGGGAATTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TMIALYPNFSCLNRRRRLAHQNL*IVGIWA Trigger: TGCCCAAATTCCCACGATTCAGAGATTTTGATGAGC...TAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CCA 90 bp | CTCCTCCTCTCTTCTGCTGAGTTGAAATTGTCCATAAGCTTAGATATTTTGATACATTGTGGCTTGAGATaGATTCACTGGACAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LLLSSAELKLSISLDILIHCGLR*IHWTGA Trigger: TGCTCCTGTCCAGTGAATCCATCTCAAGCCACAATG...TATCAAAATATCTAAGCTTATGGACAATTTCAACTCAGCAGAAGAGAGGAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR TCA 90 bp | TTGTCCATACCTTACCAACCAACCAGGAGATATCACAGTAGAGACTGGATAACTTGTAAGTGTGGATATTaGTGTCATCAACAGCATCAT | + |
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Preference number: 4 (lower is better) Translates to: LSIPYQPTRRYHSRDWITCKCGY*CHQQHH Trigger: ATGATGCTGTTGATGACATCAATATCCACACTTACA...AGTTATCCAGTCTCTACTGTGATATCTCCTGGTTGGTTGGTAAGGTATGGACAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR GCA 90 bp | ATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCAAACCAGAATTGCACCTaGTCATCCTGGGATACAATT | + |
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Preference number: 4 (lower is better) Translates to: MIALYPNFSCLNRRRRLSNQNCT*SSWDTI Trigger: AATTGTATCCCAGGATGAGCAGGTGCAATTCTGGTT...TGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR TCA 90 bp | ATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCAGAGTCCATGATGACTTTCTaGACTTCAATACGGAAACTA | + |
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Preference number: 4 (lower is better) Translates to: IALYPNFSCLNRRRRLSESMMTF*TSIRKL Trigger: TAGTTTCCGTATTGAAGTTCAGAAAGTCATCATGGA...CTCTGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR TCA 90 bp | CTCCTCCTCTCTTCTGCTGAGTTGAAATTGTCCATAAGCTTAGATATTTTGATATTAAACTCTAGGCACTaGATGGAGAAAGGAGATTTC | + |
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Preference number: 4 (lower is better) Translates to: LLLSSAELKLSISLDILILNSRH*MEKGDF Trigger: GAAATCTCCTTTCTCCATTCAGTGCCTAGAGTTTAA...TATCAAAATATCTAAGCTTATGGACAATTTCAACTCAGCAGAAGAGAGGAGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR GCA 90 bp | ATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCAGAGATTCCTCTGTTGTGTTaGCAAATTCTACTTGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: IALYPNFSCLNRRRRLSEIPLLC*QILLGK Trigger: TTTACCAAGTAGAATTTGGCAACACAACAGAGGAAT...CTCTGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS GCA 90 bp | GTACACTCAGAGCTTCTGGAGTCAGCTCGTCCCCAAAGCCCATGGTaGCAGGGCTCTGGAAATCCTCTGGGGGCACGTCTGTGGTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: VHSELLESARPQSPW*QGSGNPLGARLWLE Trigger: CTCCAACCACAGACGTGCCCCCAGAGGATTTCCAGAGCCCTGGCACCATGGGCTTTGGGGACGAGCTGACTCCAGAAGCTCTGAGTGTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CCA 90 bp | AGAAGTGATCAAGTCATCAAAACCACTAGGTACACTCAGAGCTTCTaGAGTCAGCTCGTCCCCAAAGCCCATGGTGCCAGGGCTCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: RSDQVIKTTRYTQSF*SQLVPKAHGARALE Trigger: TTCCAGAGCCCTGGCACCATGGGCTTTGGGGACGAGCTGACTCCAGAAGCTCTGAGTGTACCTAGTGGTTTTGATGACTTGATCACTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CCA 90 bp | GGGCAGCTCATCAAAATCTCTGAATCGTGGGAATTTGGGCACTCCTaGATTGGGATCCACACTGCCAGGGGTTTGGCTGTGAGATACAGA | + |
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Preference number: 5 (lower is better) Translates to: GQLIKISESWEFGHS*IGIHTARGLAVRYR Trigger: TCTGTATCTCACAGCCAAACCCCTGGCAGTGTGGATCCCAATCCAGGAGTGCCCAAATTCCCACGATTCAGAGATTTTGATGAGCTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS TCA 90 bp | TCCATCTTTGACAGCATGCCATTGCGGCCAGCATTGGATGCAGCCTaGAGCACCTGGGAGGTGGTAGAAGTGATCAAGTCATCAAAACCA | + |
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Preference number: 5 (lower is better) Translates to: SIFDSMPLRPALDAA*STWEVVEVIKSSKP Trigger: TGGTTTTGATGACTTGATCACTTCTACCACCTCCCAGGTGCTTCAGGCTGCATCCAATGCTGGCCGCAATGGCATGCTGTCAAAGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CCA 90 bp | ACTATGGTGTACCCTACCACTAACCAGAATTGCACCTGCTCATCCTaGGATACAATTTCCAAATCTAGGGGACCCGATGTGTCAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: TMVYPTTNQNCTCSS*DTISKSRGPDVSAR Trigger: CCTGGCTGACACATCGGGTCCCCTAGATTTGGAAATTGTATCCCAGGATGAGCAGGTGCAATTCTGGTTAGTGGTAGGGTACACCATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CAA 90 bp | GATACATGCAACCATGGATGCTGTCCAAAGACCCTTAAAACATTATCTCCAGAATTGGGCACTCCTGGATaGGGATCCACACTGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: DTCNHGCCPKTLKTLSPELGTPG*GSTLPG Trigger: CCCTGGCAGTGTGGATCCCAATCCAGGAGTGCCCAA...TTCTGGAGATAATGTTTTAAGGGTCTTTGGACAGCATCCATGGTTGCATGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CAA 90 bp | ACAATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTAAGGAGATTTCCACTGTaGGGGAGGGAGGGGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: TMIALYPNFSCLNRRRRLRRFPL*GREGDW Trigger: CCAGTCCCCCTCCCTCCCCAACAGTGGAAATCTCCT...TAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CCA 90 bp | AAAGGTGCCCAGGTCAAGGTATTTCCACGTGGATTTAGAAGTATATaGGAAACTTGGGAGGCAGGCAGATTCCTCTGTTGTGTTGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: KGAQVKVFPRGFRSI*ETWEAGRFLCCVAK Trigger: TTTGGCAACACAACAGAGGAATCTGCCTGCCTCCCAAGTTTCCCATATACTTCTAAATCCACGTGGAAATACCTTGACCTGGGCACCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS TCA 90 bp | ATCCAGAGAAATAGCTGCCATGCTCATCACAGTTACATAGGCACATaGGTACTGGGCAAAGCGACTGAGGTGACATGTCATCTTTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: IQRNSCHAHHSYIGT*VLGKATEVTCHLSK Trigger: TTTGGAAAGATGACATGTCACCTCAGTCGCTTTGCCCAGTACTCATGTGCCTATGTAACTGTGATGAGCATGGCAGCTATTTCTCTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CAA 90 bp | CTCCTCCTCTCTTCTGCTGAGTTGAAATTGTCCATAAGCTTAGATATTTTGATAAGCACCAGGTACACGTaGAGGGGGAGCCAGCTGATT | + |
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Preference number: 5 (lower is better) Translates to: LLLSSAELKLSISLDILISTRYT*RGSQLI Trigger: AATCAGCTGGCTCCCCCTCAACGTGTACCTGGTGCT...TATCAAAATATCTAAGCTTATGGACAATTTCAACTCAGCAGAAGAGAGGAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CAA 90 bp | GATACATGCAACCATGGATGCTGTCCAAAGACCCTTAAAACATTATCTCCAGAATGGTTTAAGACCCAGTaGCCTATGATGGCAGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: DTCNHGCCPKTLKTLSPEWFKTQ*PMMAAK Trigger: CTTTGCTGCCATCATAGGCAACTGGGTCTTAAACCA...TTCTGGAGATAATGTTTTAAGGGTCTTTGGACAGCATCCATGGTTGCATGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CAA 90 bp | ATGATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCATTGGTCACAGAAATGTaGACAACGAAGAGGCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: MIALYPNFSCLNRRRRLSLVTEM*TTKRPV Trigger: CACCGGCCTCTTCGTTGTCAACATTTCTGTGACCAA...TGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CAA 90 bp | ATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCAGAGAAGTATATGGGAAACTaGGGAGGCAGGCAGATTCCT | + |
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Preference number: 5 (lower is better) Translates to: IALYPNFSCLNRRRRLSEKYMGN*GGRQIP Trigger: AGGAATCTGCCTGCCTCCCAAGTTTCCCATATACTT...CTCTGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CAA 90 bp | GATACATGCAACCATGGATGCTGTCCAAAGACCCTTAAAACATTATCTCCAGAAAGAGCGAGCATCATGTaGGTCACAGAAATGTTGACA | + |
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Preference number: 5 (lower is better) Translates to: DTCNHGCCPKTLKTLSPERASIM*VTEMLT Trigger: TGTCAACATTTCTGTGACCAACATGATGCTCGCTCT...TTCTGGAGATAATGTTTTAAGGGTCTTTGGACAGCATCCATGGTTGCATGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS-3UTR CAA 90 bp | ATAGCCCTTTACCCAAATTTCTCTTGTCTAAACAGGAGAAGAAGGCTATCAGAGGTTGCCAAATTCTACTaGGTAAAGCTTCTGGTAAAC | + |
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Preference number: 5 (lower is better) Translates to: IALYPNFSCLNRRRRLSEVAKFY*VKLLVN Trigger: GTTTACCAGAAGCTTTACCAAGTAGAATTTGGCAAC...CTCTGATAGCCTTCTTCTCCTGTTTAGACAAGAGAAATTTGGGTAAAGGGCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS GCA 72 bp | GAGCTTCTGGAGTCAGCTCGTCCCCAAAGCCCATGGTaGCAGGGCTCTGGAAATCCTCTGGGGGCACGTCTG | + |
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Preference number: 6 (lower is better) Translates to: ELLESARPQSPW*QGSGNPLGARL Trigger: CAGACGTGCCCCCAGAGGATTTCCAGAGCCCTGGCACCATGGGCTTTGGGGACGAGCTGACTCCAGAAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CCA 72 bp | TCAGAGCTTCTGGAGTCAGCTCGTCCCCAAAGCCCATaGTGCCAGGGCTCTGGAAATCCTCTGGGGGCACGT | + |
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Preference number: 6 (lower is better) Translates to: SELLESARPQSP*CQGSGNPLGAR Trigger: ACGTGCCCCCAGAGGATTTCCAGAGCCCTGGCACCATGGGCTTTGGGGACGAGCTGACTCCAGAAGCTCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CAA 72 bp | GGGCACTCCTGGATTGGGATCCACACTGCCAGGGGTTaGGCTGTGAGATACAGAGCTCAGTCGGCGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: GHSWIGIHTARG*AVRYRAQSAML Trigger: GAGCATCGCCGACTGAGCTCTGTATCTCACAGCCAAACCCCTGGCAGTGTGGATCCCAATCCAGGAGTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CAA 90 bp | TGGGAATTTGGGCACTCCTGGATTGGGATCCACACTGCCAGGGGTTaGGCTGTGAGATACAGAGCTCAGTCGGCGATGCTCTCCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: WEFGHSWIGIHTARG*AVRYRAQSAMLSPE Trigger: CTCAGGGGAGAGCATCGCCGACTGAGCTCTGTATCTCACAGCCAAACCCCTGGCAGTGTGGATCCCAATCCAGGAGTGCCCAAATTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS TCA 72 bp | GACAGCATGCCATTGCGGCCAGCATTGGATGCAGCCTaGAGCACCTGGGAGGTGGTAGAAGTGATCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: DSMPLRPALDAA*STWEVVEVIKS Trigger: TGACTTGATCACTTCTACCACCTCCCAGGTGCTTCAGGCTGCATCCAATGCTGGCCGCAATGGCATGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS TCA 72 bp | GGGAGGGAGGGGGACTGGGCAGCTCATCAAAATCTCTaGATCGTGGGAATTTGGGCACTCCTGGATTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: GREGDWAAHQNL*IVGIWALLDWD Trigger: ATCCCAATCCAGGAGTGCCCAAATTCCCACGATTCAGAGATTTTGATGAGCTGCCCAGTCCCCCTCCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS GCA 72 bp | GGTCTGCCAACTTATCCATCTTTGACAGCATGCCATTaGGGCCAGCATTGGATGCAGCCTGAAGCACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GLPTYPSLTACH*GQHWMQPEAPG Trigger: CCCAGGTGCTTCAGGCTGCATCCAATGCTGGCCGCAATGGCATGCTGTCAAAGATGGATAAGTTGGCAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CCA 72 bp | CAAGTCATCAAAACCACTAGGTACACTCAGAGCTTCTaGAGTCAGCTCGTCCCCAAAGCCCATGGTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: QVIKTTRYTQSF*SQLVPKAHGAR Trigger: CCTGGCACCATGGGCTTTGGGGACGAGCTGACTCCAGAAGCTCTGAGTGTACCTAGTGGTTTTGATGACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CAA 72 bp | GAGATGGATTCACTGGACAGGAGCACCAGGTACACGTaGAGGGGGAGCCAGCTGATTGTATACAGAAGCACC | + |
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Preference number: 6 (lower is better) Translates to: EMDSLDRSTRYT*RGSQLIVYRST Trigger: GGTGCTTCTGTATACAATCAGCTGGCTCCCCCTCAACGTGTACCTGGTGCTCCTGTCCAGTGAATCCATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CAA 72 bp | CTGGGCAGCTCATCAAAATCTCTGAATCGTGGGAATTaGGGCACTCCTGGATTGGGATCCACACTGCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LGSSSKSLNRGN*GTPGLGSTLPG Trigger: CCCTGGCAGTGTGGATCCCAATCCAGGAGTGCCCAAATTCCCACGATTCAGAGATTTTGATGAGCTGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CAA 72 bp | CTGAGAAGAGCGAGCATCATGTTGGTCACAGAAATGTaGACAACGAAGAGGCCGGTGGCAGTGTGTACCCTC | + |
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Preference number: 6 (lower is better) Translates to: LRRASIMLVTEM*TTKRPVAVCTL Trigger: GAGGGTACACACTGCCACCGGCCTCTTCGTTGTCAACATTTCTGTGACCAACATGATGCTCGCTCTTCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CAA 90 bp | TTGTGGCTTGAGATGGATTCACTGGACAGGAGCACCAGGTACACGTaGAGGGGGAGCCAGCTGATTGTATACAGAAGCACCACTGTCATC | + |
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Preference number: 6 (lower is better) Translates to: LWLEMDSLDRSTRYT*RGSQLIVYRSTTVI Trigger: GATGACAGTGGTGCTTCTGTATACAATCAGCTGGCTCCCCCTCAACGTGTACCTGGTGCTCCTGTCCAGTGAATCCATCTCAAGCCACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CCA 72 bp | ATCAAAATCTCTGAATCGTGGGAATTTGGGCACTCCTaGATTGGGATCCACACTGCCAGGGGTTTGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: IKISESWEFGHS*IGIHTARGLAV Trigger: CACAGCCAAACCCCTGGCAGTGTGGATCCCAATCCAGGAGTGCCCAAATTCCCACGATTCAGAGATTTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CAA 90 bp | AAGGGAGAGCTGAGAAGAGCGAGCATCATGTTGGTCACAGAAATGTaGACAACGAAGAGGCCGGTGGCAGTGTGTACCCTCTTATACTTC | + |
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Preference number: 6 (lower is better) Translates to: KGELRRASIMLVTEM*TTKRPVAVCTLLYF Trigger: GAAGTATAAGAGGGTACACACTGCCACCGGCCTCTTCGTTGTCAACATTTCTGTGACCAACATGATGCTCGCTCTTCTCAGCTCTCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CAA 72 bp | CTAGCCAGTGGAGGAAAAAGTAGAGACCATTGTGGCTaGAGATGGATTCACTGGACAGGAGCACCAGGTACA | + |
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Preference number: 6 (lower is better) Translates to: LASGGKSRDHCG*RWIHWTGAPGT Trigger: TGTACCTGGTGCTCCTGTCCAGTGAATCCATCTCAAGCCACAATGGTCTCTACTTTTTCCTCCACTGGCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CCA 72 bp | TACCCTACCACTAACCAGAATTGCACCTGCTCATCCTaGGATACAATTTCCAAATCTAGGGGACCCGATGTG | + |
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Preference number: 6 (lower is better) Translates to: YPTTNQNCTCSS*DTISKSRGPDV Trigger: CACATCGGGTCCCCTAGATTTGGAAATTGTATCCCAGGATGAGCAGGTGCAATTCTGGTTAGTGGTAGGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS GCA 72 bp | GGAAACTTGGGAGGCAGGCAGATTCCTCTGTTGTGTTaGCAAATTCTACTTGGTAAAGCTTCTGGTAAACGG | + |
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Preference number: 6 (lower is better) Translates to: GNLGGRQIPLLC*QILLGKASGKR Trigger: CCGTTTACCAGAAGCTTTACCAAGTAGAATTTGGCAACACAACAGAGGAATCTGCCTGCCTCCCAAGTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CAA 72 bp | GCAGGCAGATTCCTCTGTTGTGTTGCCAAATTCTACTaGGTAAAGCTTCTGGTAAACGGCATGAGGCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: AGRFLCCVAKFY*VKLLVNGMRQS Trigger: GCTTTGCCTCATGCCGTTTACCAGAAGCTTTACCAAGTAGAATTTGGCAACACAACAGAGGAATCTGCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CCA 72 bp | CAGGTCAAGGTATTTCCACGTGGATTTAGAAGTATATaGGAAACTTGGGAGGCAGGCAGATTCCTCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: QVKVFPRGFRSI*ETWEAGRFLCC Trigger: ACAACAGAGGAATCTGCCTGCCTCCCAAGTTTCCCATATACTTCTAAATCCACGTGGAAATACCTTGACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS TCA 72 bp | TCTAGTAGCATCTTCTGGATTTCCATGATGACTTTCTaGACTTCAATACGGAAACTATCACTGAGCCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: SSSIFWISMMTF*TSIRKLSLSQQ Trigger: TTGCTGGCTCAGTGATAGTTTCCGTATTGAAGTTCAGAAAGTCATCATGGAAATCCAGAAGATGCTACTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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| CDS CAA 72 bp | CTCTTATACTTCATAATTATGTGGTTTAAGACCCAGTaGCCTATGATGGCAGCAAAGACCACTATGGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: LLYFIIMWFKTQ*PMMAAKTTMVY Trigger: GTACACCATAGTGGTCTTTGCTGCCATCATAGGCAACTGGGTCTTAAACCACATAATTATGAAGTATAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033554.5 |
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