Pregenerated sensors for GPR162 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038390Ensembl transcript IDs: ENSMUST00000046893.10, ENSMUST00000204667.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCTCCCTGGAGGCAGCTaGCATAGACTCAGGGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GVKTGALGIWSLGWERAGLPGGS*HRLRAR Trigger: CCTGGCCCTGAGTCTATGGCAGCTGCCTCCAGGGAG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGGGGTCCCGACTCCCTaGCCCTGTGGCCCCGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGGVPTP*PCGPVS Trigger: GCTAACGGGGCCACAGGGTCAGGGAGTCGGGACCCC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGAGAGCGAGGCGACCGTaGAGCAGGTGGCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGRARRP*SRWPGP Trigger: TGGCCCTGGCCACCTGCTTCACGGTCGCCTCGCTCT...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCTTTGGTGCCCACACTaGCCCCCGCTCTCCGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGLWCPH*PPLSGP Trigger: AGGCCCGGAGAGCGGGGGGCAGTGTGGGCACCAAAG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCGCTCCCCGTTGTTGTaGCAGCCGATGGAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGRSPLL*QPMEGS Trigger: GCTGCCCTCCATCGGCTGGCACAACAACGGGGAGCG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGCAGCTTCACCTGGGTaGGGTCCCGACTCCCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGAASPG*GPDSLT Trigger: GGTCAGGGAGTCGGGACCCCACCCAGGTGAAGCTGC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGGCAGCAGCTTCACCTaGGTGGGGTCCCGACTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGGSSFT*VGSRLP Trigger: AGGGAGTCGGGACCCCACCCAGGTGAAGCTGCTGCC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCCGAGGGCTCGGCTCTaGGCTGGGAGGATCCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGPRARL*AGRIRI Trigger: TATCCGGATCCTCCCAGCCCAGAGCCGAGCCCTCGG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCCATCCAGATGCCCATaGCGGCATGCAGCGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGPSRCP*RHAAPA Trigger: AGCAGGCGCTGCATGCCGTCATGGGCATCTGGATGG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGCCTGGCGCCGGAGCTaGACCACAGCAAAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGAWRRS*TTAKVV Trigger: TACCACCTTTGCTGTGGTGCAGCTCCGGCGCCAGGC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCTGTCCCAGGTATTCTaGAGGGCCTCCGAGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGLSQVF*RASEGS Trigger: CGAGCCCTCGGAGGCCCTCCAGAATACCTGGGACAG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGCTCACAGGACCAGATaGAGGAGGGCAGGAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGAHRTR*RRAGAV Trigger: CACTGCTCCTGCCCTCCTTCATCTGGTCCTGTGAGC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGAGGAGAGGGTCCTGGTaGCGCAGTTGGAGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGRRGSW*RSWRRQ Trigger: CTGCCTTCTCCAACTGCGTCACCAGGACCCTCTCCT...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGACGGCATGCAGCGCCTaGTTCTTGGCGTTGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGTACSA*FLALLR Trigger: CCTCAGCAACGCCAAGAAGCAGGCGCTGCATGCCGT...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGATGCCCATGACGGCATaGAGCGCCTGCTTCTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGMPMTA*SACFLA Trigger: CGCCAAGAAGCAGGCGCTGCATGCCGTCATGGGCAT...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGGAGCACCACAGCACTaGCAACACCATCCATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGGAPQH*QHHPWR Trigger: CCGCCATGGATGGTGTTGGCAGTGCTGTGGTGCTCC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGTGTTGTGCCAGCCGATaGAGGGCAGCGTGGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGCCASR*RAAWRG Trigger: TCCTCTCCACGCTGCCCTCCATCGGCTGGCACAACA...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGGCTCGGCTCTGGGCTaGGAGGATCCGGATATCATC | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGGSALG*EDPDII Trigger: GATGATATCCGGATCCTCCCAGCCCAGAGCCGAGCC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGTCAACTGGGGGAAGATaGGGTTACCTGGCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGSTGGR*GYLAPR Trigger: CCTGGGGGCCAGGTAACCCCATCTTCCCCCAGTTGA...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGGAGAGCCGTCGAGGTaGAAAACCCAGTGGTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGGEPSR*KTQWSR Trigger: CCTAGACCACTGGGTTTTTCACCTCGACGGCTCTCC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCACTGTGCGCACATCTaGACGGTAGCGCTCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGHCAHI*TVALTG Trigger: TCCTGTGAGCGCTACCGTGCAGATGTGCGCACAGTG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGACTGCTCCCACACTGTaGGCACATCTGCACGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGTAPTL*AHLHGS Trigger: GCTACCGTGCAGATGTGCGCACAGTGTGGGAGCAGT...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGATGAGGACCACTTGTaGAGGAAGGAGCCTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGDEDHL*RKEPGA Trigger: GGCACCAGGCTCCTTCCTGCACAAGTGGTCCTCATC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCGATCTTGGAGACTATaGACTGGCAGCCTCGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGRSWRL*TGSLGH Trigger: ATGCCCGAGGCTGCCAGTTCATAGTCTCCAAGATCG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCACAGACCAACCCCATaGCAATGCCCCCAAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGHRPTP*QCPQEA Trigger: TGCTTCTTGGGGGCATTGTCATGGGGTTGGTCTGTG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGATGATCGCCACACACTaGTCCCACACTGTGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGMIATH*SHTVRT Trigger: TGTGCGCACAGTGTGGGAGCAGTGTGTGGCGATCAT...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGTGCAGGAAGGAGCCTaGTGCCCGAGGAGTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGVQEGA*CPRSRK Trigger: TTTTCTACTCCTCGGGCACCAGGCTCCTTCCTGCAC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCAAGAAGCAGGAGGCTaGAGCAGACACCAAAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGQEAGG*SRHQNR Trigger: TCGGTTTTGGTGTCTGCTTCAGCCTCCTGCTTCTTG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCCGGATATCATCCGATaGGGACCACTTGTGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGPDIIR*GPLVQE Trigger: TTCCTGCACAAGTGGTCCTCATCGGATGATATCCGG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCAGGAAGGAGCCTGGTaGCCGAGGAGTAGAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGQEGAW*PRSRKD Trigger: ATCTTTTCTACTCCTCGGGCACCAGGCTCCTTCCTG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGAAATGGGCACCCCCGTaGGTGAGTCATAGAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGKWAPP*VSHRER Trigger: TCTTTCTCTATGACTCACTCACGGGGGTGCCCATTT...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGTATCCTCCACCACAATaGCTGGCACCTCAAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGYPPPQ*LAPQKL Trigger: CAGCTTTTGAGGTGCCAGCCATTGTGGTGGAGGATA...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGTGGACACAAAGACCTTaGAGATGCTCTCGTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGWTQRP*RCSRSS Trigger: ACTGGAACGAGAGCATCTGCAAGGTCTTTGTGTCCA...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGACCAAGTTGGTGACCTaGAAGGATGTCTTGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGTKLVT*KDVLAD Trigger: ATCTGCCAAGACATCCTTGCAGGTCACCAACTTGGT...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGTTTCTGCTGTTTGGCTaGGATGCTAAGGATGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGFLLFG*DAKDDP Trigger: TGGATCATCCTTAGCATCTCAGCCAAACAGCAGAAA...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGAGTGGCTTGTGTTTCTaGTGTTTGGCTGAGATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGSGLCF*CLAEML Trigger: TAGCATCTCAGCCAAACAGCAGAAACACAAGCCACT...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCAAAGACCTTGCAGATaGTCTCGTTCCAGTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGQRPCR*SRSSHS Trigger: ACTATGACTGGAACGAGAGCATCTGCAAGGTCTTTG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGCATCAAAGCGAATTTTaGACACTCGGCCATCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVKTGALGIWSLGWERAGHQSEF*TLGHLC Trigger: ACACAGATGGCCGAGTGTGCAAAATTCGCTTTGATG...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS CCA 90 bp | TCCAGCGGTGGGAAGAGCATGTGCCGCCCAGGCAGCAGCTTCACCTaGGTGGGGTCCCGACTCCCTGACCCTGTGGCCCCGTTAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSGGKSMCRPGSSFT*VGSRLPDPVAPLAS Trigger: TGATGCTAACGGGGCCACAGGGTCAGGGAGTCGGGACCCCACCCAGGTGAAGCTGCTGCCTGGGCGGCACATGCTCTTCCCACCGCTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS TCA 90 bp | TCCGAGGGCTCGGCTCTGGGCTGGGAGGATCCGGATATCATCCGATaGGGACCACTTGTGCAGGAAGGAGCCTGGTGCCCGAGGAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SEGSALGWEDPDIIR*GPLVQEGAWCPRSR Trigger: TCTACTCCTCGGGCACCAGGCTCCTTCCTGCACAAGTGGTCCTCATCGGATGATATCCGGATCCTCCCAGCCCAGAGCCGAGCCCTCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGAGGATGATCCAAGCGTaGGCCAGCAGGGCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVKTGALGIWSLGWERAGRMIQA*ASRARS Trigger: GCTCCTGGCCCTGCTGGCCAACGCTTGGATCATCCT...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGTCTTCCCCAAGCCCTaGAACTCCCTTCGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GVKTGALGIWSLGWERAGVFPKP*NSLRSR Trigger: CCGGGAGCGAAGGGAGTTCAAGGGCTTGGGGAAGAC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS GCA 90 bp | CTCGGACATGATCGCCACACACTGCTCCCACACTGTGCGCACATCTaGACGGTAGCGCTCACAGGACCAGATGAAGGAGGGCAGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGHDRHTLLPHCAHI*TVALTGPDEGGQEQ Trigger: CTGCTCCTGCCCTCCTTCATCTGGTCCTGTGAGCGCTACCGTGCAGATGTGCGCACAGTGTGGGAGCAGTGTGTGGCGATCATGTCCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS CCA 90 bp | TGTCTCTGTCCCAGGTATTCTGGAGGGCCTCCGAGGGCTCGGCTCTaGGCTGGGAGGATCCGGATATCATCCGATGAGGACCACTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLCPRYSGGPPRARL*AGRIRISSDEDHLC Trigger: GCACAAGTGGTCCTCATCGGATGATATCCGGATCCTCCCAGCCCAGAGCCGAGCCCTCGGAGGCCCTCCAGAATACCTGGGACAGAGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGCCAGGACAATGCGTTaGAGCGTAGGGAGGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GVKTGALGIWSLGWERAGARTMR*SVGRPL Trigger: AAGAGGCCTCCCTACGCTCAAACGCATTGTCCTGGC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGTCCGATGAGGACCACTaGTGCAGGAAGGAGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GVKTGALGIWSLGWERAGSDEDH*CRKEPG Trigger: ACCAGGCTCCTTCCTGCACAAGTGGTCCTCATCGGA...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGTCCTGGTGACGCAGTaGGAGAAGGCAGAGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GVKTGALGIWSLGWERAGVLVTQ*EKAEVS Trigger: AGACACCTCTGCCTTCTCCAACTGCGTCACCAGGAC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGATGGCGCTGACCAAGTaGGTGACCTGCAAGGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: GVKTGALGIWSLGWERAGMALTK*VTCKDV Trigger: GACATCCTTGCAGGTCACCAACTTGGTCAGCGCCAT...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS TCA 90 bp | TGTAGTCGTCACAGGTGCCATCGTCATCACCGTCATCCTCGGACATaGTCGCCACACACTGCTCCCACACTGTGCGCACATCTGCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSRHRCHRHHRHPRT*SPHTAPTLCAHLHG Trigger: ACCGTGCAGATGTGCGCACAGTGTGGGAGCAGTGTGTGGCGATCATGTCCGAGGATGACGGTGATGACGATGGCACCTGTGACGACTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGTGGACACAAAGACCTaGCAGATGCTCTCGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVKTGALGIWSLGWERAGVDTKT*QMLSFQ Trigger: CTGGAACGAGAGCATCTGCAAGGTCTTTGTGTCCAC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGAAACCGAGGCCGATCTaGGAGACTATGAACTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVKTGALGIWSLGWERAGKPRPI*ETMNWQ Trigger: CTGCCAGTTCATAGTCTCCAAGATCGGCCTCGGTTT...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS GCA 90 bp | CTCTGGGCTGGGAGGATCCGGATATCATCCGATGAGGACCACTTGTaGAGGAAGGAGCCTGGTGCCCGAGGAGTAGAAAAGATGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LWAGRIRISSDEDHL*RKEPGARGVEKMLV Trigger: GACCAACATCTTTTCTACTCCTCGGGCACCAGGCTCCTTCCTGCACAAGTGGTCCTCATCGGATGATATCCGGATCCTCCCAGCCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGGCATCAAAGCGAATTTaGCACACTCGGCCATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GVKTGALGIWSLGWERAGASKRI*HTRPSV Trigger: CACAGATGGCCGAGTGTGCAAAATTCGCTTTGATGC...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS TCA 90 bp | TGCACCACAGCAAAGGTGGTAAGGGGCACAGCCGCCATGAGTATATaGGTACCGGCCAGGAAGCAGAGCAGTAACTCCAGTGGCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CTTAKVVRGTAAMSI*VPARKQSSNSSGLC Trigger: ACACAAGCCACTGGAGTTACTGCTCTGCTTCCTGGCCGGTACTCATATACTCATGGCGGCTGTGCCCCTTACCACCTTTGCTGTGGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS GCA 90 bp | GTACCGGCCAGGAAGCAGAGCAGTAACTCCAGTGGCTTGTGTTTCTaGTGTTTGGCTGAGATGCTAAGGATGATCCAAGCGTTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPARKQSSNSSGLCF*CLAEMLRMIQALAS Trigger: GCTGGCCAACGCTTGGATCATCCTTAGCATCTCAGCCAAACAGCAGAAACACAAGCCACTGGAGTTACTGCTCTGCTTCCTGGCCGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGAAGACGGGTGCGTTGGGTATCTGGTCACTTGGATGGGAGAGAGCTGGGTTGTGTTTCTGCTGTTaGGCTGAGATGCTAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GVKTGALGIWSLGWERAGLCFCC*AEMLRM Trigger: CATCCTTAGCATCTCAGCCAAACAGCAGAAACACAA...CCCAGCTCTCTCCCATCCAAGTGACCAGATACCCAACGCACCCGTCTTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS TCA 90 bp | CTTCAAGGAGAAGAAGCTCACCACCAAAATGGGCACCCCCGTGAGTaGGTCATAGAGAAAGACGATGGCGCTGACCAAGTTGGTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQGEEAHHQNGHPRE*VIEKDDGADQVGDL Trigger: CAGGTCACCAACTTGGTCAGCGCCATCGTCTTTCTCTATGACTCACTCACGGGGGTGCCCATTTTGGTGGTGAGCTTCTTCTCCTTGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS CCA 72 bp | GGGAAGAGCATGTGCCGCCCAGGCAGCAGCTTCACCTaGGTGGGGTCCCGACTCCCTGACCCTGTGGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GKSMCRPGSSFT*VGSRLPDPVAP Trigger: CGGGGCCACAGGGTCAGGGAGTCGGGACCCCACCCAGGTGAAGCTGCTGCCTGGGCGGCACATGCTCTTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS CAA 90 bp | TGGCCAGCAGGGCCAGGAGCCCACAGGCCAGCCAGGACAATGCGTTaGAGCGTAGGGAGGCCTCTTCTGCCCCCAACCCTCCCCGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: WPAGPGAHRPARTMR*SVGRPLLPPTLPEP Trigger: TGGCTCGGGGAGGGTTGGGGGCAGAAGAGGCCTCCCTACGCTCAAACGCATTGTCCTGGCTGGCCTGTGGGCTCCTGGCCCTGCTGGCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS CCA 72 bp | CCCAGGTATTCTGGAGGGCCTCCGAGGGCTCGGCTCTaGGCTGGGAGGATCCGGATATCATCCGATGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PRYSGGPPRARL*AGRIRISSDED Trigger: GTCCTCATCGGATGATATCCGGATCCTCCCAGCCCAGAGCCGAGCCCTCGGAGGCCCTCCAGAATACCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS TCA 72 bp | TCGGCTCTGGGCTGGGAGGATCCGGATATCATCCGATaGGGACCACTTGTGCAGGAAGGAGCCTGGTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SALGWEDPDIIR*GPLVQEGAWCP Trigger: CGGGCACCAGGCTCCTTCCTGCACAAGTGGTCCTCATCGGATGATATCCGGATCCTCCCAGCCCAGAGCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS CCA 72 bp | AGGACCGCCGCTTCCCTCGAGTATCCTCCACCACAATaGCTGGCACCTCAAAAGCTGGCCGGGTACCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: RTAASLEYPPPQ*LAPQKLAGYPT Trigger: GGTTGGGTACCCGGCCAGCTTTTGAGGTGCCAGCCATTGTGGTGGAGGATACTCGAGGGAAGCGGCGGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS TCA 72 bp | TGCGCACATCTGCACGGTAGCGCTCACAGGACCAGATaGAGGAGGGCAGGAGCAGTGTCTGTGCCATGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CAHLHGSAHRTR*RRAGAVSVPWS Trigger: GCTCCATGGCACAGACACTGCTCCTGCCCTCCTTCATCTGGTCCTGTGAGCGCTACCGTGCAGATGTGCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS TCA 72 bp | TCGGCTATCCGGAGACCCAAGGGAGAGCCGTCGAGGTaGAAAACCCAGTGGTCTAGGCCTACGAGGAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SAIRRPKGEPSR*KTQWSRPTRRG Trigger: CCCTCTCCTCGTAGGCCTAGACCACTGGGTTTTTCACCTCGACGGCTCTCCCTTGGGTCTCCGGATAGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS GCA 72 bp | GATCGCCACACACTGCTCCCACACTGTGCGCACATCTaGACGGTAGCGCTCACAGGACCAGATGAAGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: DRHTLLPHCAHI*TVALTGPDEGG Trigger: CCCTCCTTCATCTGGTCCTGTGAGCGCTACCGTGCAGATGTGCGCACAGTGTGGGAGCAGTGTGTGGCGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS TCA 72 bp | AGGCAGCAGCTTCACCTGGGTGGGGTCCCGACTCCCTaGCCCTGTGGCCCCGTTAGCATCAAAGCGAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: RQQLHLGGVPTP*PCGPVSIKANF Trigger: AAAATTCGCTTTGATGCTAACGGGGCCACAGGGTCAGGGAGTCGGGACCCCACCCAGGTGAAGCTGCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS CAA 90 bp | CGGCTCTGGGCTGGGAGGATCCGGATATCATCCGATGAGGACCACTaGTGCAGGAAGGAGCCTGGTGCCCGAGGAGTAGAAAAGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RLWAGRIRISSDEDH*CRKEPGARGVEKML Trigger: CAACATCTTTTCTACTCCTCGGGCACCAGGCTCCTTCCTGCACAAGTGGTCCTCATCGGATGATATCCGGATCCTCCCAGCCCAGAGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS TCA 72 bp | AGCAGACACCAAAACCGAGGCCGATCTTGGAGACTATaGACTGGCAGCCTCGGGCATAGTAGCGCTCCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SRHQNRGRSWRL*TGSLGHSSAPR Trigger: ACGGGGAGCGCTACTATGCCCGAGGCTGCCAGTTCATAGTCTCCAAGATCGGCCTCGGTTTTGGTGTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS TCA 72 bp | CACAGGTGCCATCGTCATCACCGTCATCCTCGGACATaGTCGCCACACACTGCTCCCACACTGTGCGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: HRCHRHHRHPRT*SPHTAPTLCAH Trigger: ATGTGCGCACAGTGTGGGAGCAGTGTGTGGCGATCATGTCCGAGGATGACGGTGATGACGATGGCACCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS GCA 72 bp | GGGAGGATCCGGATATCATCCGATGAGGACCACTTGTaGAGGAAGGAGCCTGGTGCCCGAGGAGTAGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GRIRISSDEDHL*RKEPGARGVEK Trigger: CTTTTCTACTCCTCGGGCACCAGGCTCCTTCCTGCACAAGTGGTCCTCATCGGATGATATCCGGATCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS TCA 72 bp | GCAAAGGTGGTAAGGGGCACAGCCGCCATGAGTATATaGGTACCGGCCAGGAAGCAGAGCAGTAACTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AKVVRGTAAMSI*VPARKQSSNSS Trigger: ACTGGAGTTACTGCTCTGCTTCCTGGCCGGTACTCATATACTCATGGCGGCTGTGCCCCTTACCACCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS CAA 72 bp | AGGAAGGAGCCTGGTGCCCGAGGAGTAGAAAAGATGTaGGTCTCATCGTGGGATAATCGTCGGGACAAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RKEPGARGVEKM*VSSWDNRRDKG Trigger: CCCTTTGTCCCGACGATTATCCCACGATGAGACCAACATCTTTTCTACTCCTCGGGCACCAGGCTCCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS CAA 90 bp | CACTTGTGCAGGAAGGAGCCTGGTGCCCGAGGAGTAGAAAAGATGTaGGTCTCATCGTGGGATAATCGTCGGGACAAAGGGACCTGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: HLCRKEPGARGVEKM*VSSWDNRRDKGTCK Trigger: CTTACAGGTCCCTTTGTCCCGACGATTATCCCACGATGAGACCAACATCTTTTCTACTCCTCGGGCACCAGGCTCCTTCCTGCACAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS TCA 72 bp | GAAGAAGCTCACCACCAAAATGGGCACCCCCGTGAGTaGGTCATAGAGAAAGACGATGGCGCTGACCAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: EEAHHQNGHPRE*VIEKDDGADQV Trigger: AACTTGGTCAGCGCCATCGTCTTTCTCTATGACTCACTCACGGGGGTGCCCATTTTGGTGGTGAGCTTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS CAA 72 bp | GTACCGGCCAGGAAGCAGAGCAGTAACTCCAGTGGCTaGTGTTTCTGCTGTTTGGCTGAGATGCTAAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: VPARKQSSNSSG*CFCCLAEMLRM Trigger: CATCCTTAGCATCTCAGCCAAACAGCAGAAACACAAGCCACTGGAGTTACTGCTCTGCTTCCTGGCCGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS CAA 72 bp | CAGAGCAGTAACTCCAGTGGCTTGTGTTTCTGCTGTTaGGCTGAGATGCTAAGGATGATCCAAGCGTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QSSNSSGLCFCC*AEMLRMIQALA Trigger: GGCCAACGCTTGGATCATCCTTAGCATCTCAGCCAAACAGCAGAAACACAAGCCACTGGAGTTACTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||
| CDS GCA 72 bp | AGGAAGCAGAGCAGTAACTCCAGTGGCTTGTGTTTCTaGTGTTTGGCTGAGATGCTAAGGATGATCCAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RKQSSNSSGLCF*CLAEMLRMIQA Trigger: CGCTTGGATCATCCTTAGCATCTCAGCCAAACAGCAGAAACACAAGCCACTGGAGTTACTGCTCTGCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046893.10 ENSMUST00000204667.2 |
||