Pregenerated sensors for GPR161 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040836Ensembl transcript IDs: ENSMUST00000111450.3, ENSMUST00000178700.8
Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGTGGGGTGGCCACATCTTGGGTGGCCTGTGGGCTGTTTCTATTaGCCAGCAGCAGGTGCTACCCAAGAGCAAGTCCTAACTAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: WVGWPHLGWPVGCFY*PAAGATQEQVLTRA Trigger: TGCCCTAGTTAGGACTTGCTCTTGGGTAGCACCTGCTGCTGGCCAATAGAAACAGCCCACAGGCCACCCAAGATGTGGCCACCCCACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR GCA 90 bp | TCCCACCTACCACCACCTATGGTTCCCCTGGGAAGGCCTTGGGCCTaGCACTACACAGGAATTTGCAGCAGGGTCTGCCATTACATGCCA | + |
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Preference number: 1 (lower is better) Translates to: SHLPPPMVPLGRPWA*HYTGICSRVCHYMP Trigger: TGGCATGTAATGGCAGACCCTGCTGCAAATTCCTGTGTAGTGGCAGGCCCAAGGCCTTCCCAGGGGAACCATAGGTGGTGGTAGGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR GCA 90 bp | TTGGAAGACAAGAGCTCTGGGAACTGGGAGCCAGACACTTGTCACTaGTGGACAGAGCAGTCCTCAGCACCTAACGGCATTGGGGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: LEDKSSGNWEPDTCH*WTEQSSAPNGIGVG Trigger: CCCCACCCCAATGCCGTTAGGTGCTGAGGACTGCTCTGTCCAGCAGTGACAAGTGTCTGGCTCCCAGTTCCCAGAGCTCTTGTCTTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | CACATGTCCCACCTACCACCACCTATGGTTCCCCTGGGAAGGCCTTaGGCCTGCCACTACACAGGAATTTGCAGCAGGGTCTGCCATTAC | + |
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Preference number: 1 (lower is better) Translates to: HMSHLPPPMVPLGRP*ACHYTGICSRVCHY Trigger: GTAATGGCAGACCCTGCTGCAAATTCCTGTGTAGTGGCAGGCCCAAGGCCTTCCCAGGGGAACCATAGGTGGTGGTAGGTGGGACATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | TTTCAATCCTCCTGGCTGCATACCAGATGTTTCCTTCCCGGCGTCTaGCCCTCTCTGAGTGGTGACATGTTCCAGGGTCTTGGCACAGGC | + |
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Preference number: 1 (lower is better) Translates to: FQSSWLHTRCFLPGV*PSLSGDMFQGLGTG Trigger: GCCTGTGCCAAGACCCTGGAACATGTCACCACTCAGAGAGGGCCAGACGCCGGGAAGGAAACATCTGGTATGCAGCCAGGAGGATTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR GCA 90 bp | GGAAGGCCTTGGGCCTGCCACTACACAGGAATTTGCAGCAGGGTCTaGCATTACATGCCAGGGCTTAATTGGGATGGTAGGCTTCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: GRPWACHYTGICSRV*HYMPGLNWDGRLLH Trigger: GTGCAGAAGCCTACCATCCCAATTAAGCCCTGGCATGTAATGGCAGACCCTGCTGCAAATTCCTGTGTAGTGGCAGGCCCAAGGCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR GCA 90 bp | ATGGTTCCCCTGGGAAGGCCTTGGGCCTGCCACTACACAGGAATTTaGAGCAGGGTCTGCCATTACATGCCAGGGCTTAATTGGGATGGT | + |
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Preference number: 1 (lower is better) Translates to: MVPLGRPWACHYTGI*SRVCHYMPGLNWDG Trigger: ACCATCCCAATTAAGCCCTGGCATGTAATGGCAGACCCTGCTGCAAATTCCTGTGTAGTGGCAGGCCCAAGGCCTTCCCAGGGGAACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | CTCTACATCTTCCATCAGGGCTTGGAAGACAAGAGCTCTGGGAACTaGGAGCCAGACACTTGTCACTGCTGGACAGAGCAGTCCTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: LYIFHQGLEDKSSGN*EPDTCHCWTEQSSA Trigger: TGCTGAGGACTGCTCTGTCCAGCAGTGACAAGTGTCTGGCTCCCAGTTCCCAGAGCTCTTGTCTTCCAAGCCCTGATGGAAGATGTAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | ATCCCTCCTCTACATCTTCCATCAGGGCTTGGAAGACAAGAGCTCTaGGAACTGGGAGCCAGACACTTGTCACTGCTGGACAGAGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: IPPLHLPSGLGRQEL*ELGARHLSLLDRAV Trigger: GACTGCTCTGTCCAGCAGTGACAAGTGTCTGGCTCCCAGTTCCCAGAGCTCTTGTCTTCCAAGCCCTGATGGAAGATGTAGAGGAGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | GCCCGCCTGTCCCTCCTCGTAGCCGTTCATAGCTGGTCACAACCATaGTCCTGTAGTTCATGTTATAACTCACTTCCTTCATCCCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: ARLSLLVAVHSWSQP*SCSSCYNSLPSSPG Trigger: GCCTGGGGATGAAGGAAGTGAGTTATAACATGAACTACAGGACCATGGTTGTGACCAGCTATGAACGGCTACGAGGAGGGACAGGCGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR TCA 90 bp | GAGGCCTCACTGAGACCAGGGACAGCTAAAGCAGCTGGATACCATTaGAGACAAGAGCCACATGGTGGCTTCCCTTTCACATCCACCATC | + |
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Preference number: 1 (lower is better) Translates to: EASLRPGTAKAAGYH*RQEPHGGFPFTSTI Trigger: GATGGTGGATGTGAAAGGGAAGCCACCATGTGGCTCTTGTCTTCAATGGTATCCAGCTGCTTTAGCTGTCCCTGGTCTCAGTGAGGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR GCA 90 bp | ACTCGGGTCCAGTGCCCTTTCTACCTTTGTGCCAGCCCCCAAACTTaGTATGACAGTCACAATTGCCTCTGGAAAGTGAGGCCAGCTATG | + |
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Preference number: 1 (lower is better) Translates to: TRVQCPFYLCASPQT*YDSHNCLWKVRPAM Trigger: CATAGCTGGCCTCACTTTCCAGAGGCAATTGTGACTGTCATAGCAAGTTTGGGGGCTGGCACAAAGGTAGAAAGGGCACTGGACCCGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR GCA 90 bp | GGGCCTGCCACTACACAGGAATTTGCAGCAGGGTCTGCCATTACATaGCAGGGCTTAATTGGGATGGTAGGCTTCTGCACAAAAGGCAAG | + |
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Preference number: 1 (lower is better) Translates to: GPATTQEFAAGSAIT*QGLIGMVGFCTKGK Trigger: CTTGCCTTTTGTGCAGAAGCCTACCATCCCAATTAAGCCCTGGCATGTAATGGCAGACCCTGCTGCAAATTCCTGTGTAGTGGCAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR GCA 90 bp | GCACCTATGTCCTGTGCTGGATGTACCATGAGCATTTCTGTAGTCTaGCAAGCACCCTGTGCAGGCGGTATCCTTGGATTCTGTGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: APMSCAGCTMSISVV*QAPCAGGILGFCVP Trigger: AGGGACACAGAATCCAAGGATACCGCCTGCACAGGGTGCTTGGCAGACTACAGAAATGCTCATGGTACATCCAGCACAGGACATAGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR TCA 90 bp | GGTCCAGTGCCCTTTCTACCTTTGTGCCAGCCCCCAAACTTGCTATaGCAGTCACAATTGCCTCTGGAAAGTGAGGCCAGCTATGTTTGC | + |
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Preference number: 1 (lower is better) Translates to: GPVPFLPLCQPPNLL*QSQLPLESEASYVC Trigger: GCAAACATAGCTGGCCTCACTTTCCAGAGGCAATTGTGACTGTCATAGCAAGTTTGGGGGCTGGCACAAAGGTAGAAAGGGCACTGGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | TTTAAAGCAAAACAAGTGGCCACATGTCCCACCTACCACCACCTATaGTTCCCCTGGGAAGGCCTTGGGCCTGCCACTACACAGGAATTT | + |
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Preference number: 1 (lower is better) Translates to: FKAKQVATCPTYHHL*FPWEGLGPATTQEF Trigger: AAATTCCTGTGTAGTGGCAGGCCCAAGGCCTTCCCAGGGGAACCATAGGTGGTGGTAGGTGGGACATGTGGCCACTTGTTTTGCTTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR TCA 90 bp | CCCAGGAGCCCTGAAGCAGCCCACATGTGCTTTACAGAAGACAACTaGAGTCAGAGACTGGAGACAGTATTTTCAATCCTCCTGGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: PRSPEAAHMCFTEDN*SQRLETVFSILLAA Trigger: TGCAGCCAGGAGGATTGAAAATACTGTCTCCAGTCTCTGACTTCAGTTGTCTTCTGTAAAGCACATGTGGGCTGCTTCAGGGCTCCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | AAGACAACTGAAGTCAGAGACTGGAGACAGTATTTTCAATCCTCCTaGCTGCATACCAGATGTTTCCTTCCCGGCGTCTGGCCCTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: KTTEVRDWRQYFQSS*LHTRCFLPGVWPSL Trigger: CAGAGAGGGCCAGACGCCGGGAAGGAAACATCTGGTATGCAGCCAGGAGGATTGAAAATACTGTCTCCAGTCTCTGACTTCAGTTGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | ACAGGAATTTGCAGCAGGGTCTGCCATTACATGCCAGGGCTTAATTaGGATGGTAGGCTTCTGCACAAAAGGCAAGCGTCTTCCAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: TGICSRVCHYMPGLN*DGRLLHKRQASSRE Trigger: CTCTCTGGAAGACGCTTGCCTTTTGTGCAGAAGCCTACCATCCCAATTAAGCCCTGGCATGTAATGGCAGACCCTGCTGCAAATTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | TTCCTTCATCCCCAGGCTTTATCTGGTTCTGAACACTCTGGGGAATaGCATGGACACCTATCCCTCCTCTACATCTTCCATCAGGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: FLHPQALSGSEHSGE*HGHLSLLYIFHQGL Trigger: CAAGCCCTGATGGAAGATGTAGAGGAGGGATAGGTGTCCATGCCATTCCCCAGAGTGTTCAGAACCAGATAAAGCCTGGGGATGAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR GCA 90 bp | CCCATCAGATACACTGAAAAGCAAGGCCAGTGTCTCAGGTCTCCCTaGACCTATGTCCTGTGCTGGATGTACCATGAGCATTTCTGTAGT | + |
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Preference number: 1 (lower is better) Translates to: PIRYTEKQGQCLRSP*TYVLCWMYHEHFCS Trigger: ACTACAGAAATGCTCATGGTACATCCAGCACAGGACATAGGTGCAGGGAGACCTGAGACACTGGCCTTGCTTTTCAGTGTATCTGATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | GGCTTCAAATCCTTTAAAAGGGAGGTCACATCACTTCTGGAATACTaGAGACTCCTGGGGTCAGCCAATAGGGTTCAGAGGCCTCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: GFKSFKREVTSLLEY*RLLGSANRVQRPQH Trigger: ATGCTGAGGCCTCTGAACCCTATTGGCTGACCCCAGGAGTCTCCAGTATTCCAGAAGTGATGTGACCTCCCTTTTAAAGGATTTGAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | CAGGGTCTGGAGCCCCTAGTTTCTTCTTATCTAATAAAACCCAGCTaGCCCACTCTGCTAAGGATGACCTTTAACCTACCTGTGCATCAC | + |
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Preference number: 1 (lower is better) Translates to: QGLEPLVSSYLIKPS*PTLLRMTFNLPVHH Trigger: GTGATGCACAGGTAGGTTAAAGGTCATCCTTAGCAGAGTGGGCCAGCTGGGTTTTATTAGATAAGAAGAAACTAGGGGCTCCAGACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR TCA 90 bp | TTTCCTCTCCACAACAATACTGCTGCCATCTTATGTCTAAGGTCTTaGACCTCCCATTTGGGTTGTCTGGCCAGGGAAAAGCAAGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: FPLHNNTAAILCLRS*TSHLGCLAREKQGA Trigger: AGCACCTTGCTTTTCCCTGGCCAGACAACCCAAATGGGAGGTTCAAGACCTTAGACATAAGATGGCAGCAGTATTGTTGTGGAGAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | ACTCTGCTAAGGATGACCTTTAACCTACCTGTGCATCACTCTCCTTaGGCTACAGGCTTGATCTTCTCTCAGCCTCATGACCAAGACATA | + |
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Preference number: 1 (lower is better) Translates to: TLLRMTFNLPVHHSP*ATGLIFSQPHDQDI Trigger: TATGTCTTGGTCATGAGGCTGAGAGAAGATCAAGCCTGTAGCCCAAGGAGAGTGATGCACAGGTAGGTTAAAGGTCATCCTTAGCAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR TCA 90 bp | TCATGTTATAACTCACTTCCTTCATCCCCAGGCTTTATCTGGTTCTaGACACTCTGGGGAATGGCATGGACACCTATCCCTCCTCTACAT | + |
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Preference number: 1 (lower is better) Translates to: SCYNSLPSSPGFIWF*TLWGMAWTPIPPLH Trigger: ATGTAGAGGAGGGATAGGTGTCCATGCCATTCCCCAGAGTGTTCAGAACCAGATAAAGCCTGGGGATGAAGGAAGTGAGTTATAACATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | AACAGATCCATTCCTAGGCGTGCAGGCTTTCTACCACACTTGGCATaGTCTTTGGGAAGAACTGGTGCATCTGTGATTTGTAGTGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: NRSIPRRAGFLPHLA*SLGRTGASVICSVS Trigger: TGAAACACTACAAATCACAGATGCACCAGTTCTTCCCAAAGACCATGCCAAGTGTGGTAGAAAGCCTGCACGCCTAGGAATGGATCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CCA 90 bp | AAGCAGCCCACATGTGCTTTACAGAAGACAACTGAAGTCAGAGACTaGAGACAGTATTTTCAATCCTCCTGGCTGCATACCAGATGTTTC | + |
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Preference number: 1 (lower is better) Translates to: KQPTCALQKTTEVRD*RQYFQSSWLHTRCF Trigger: GAAACATCTGGTATGCAGCCAGGAGGATTGAAAATACTGTCTCCAGTCTCTGACTTCAGTTGTCTTCTGTAAAGCACATGTGGGCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR TCA 90 bp | GGCTTAGTGATATGCCCTAACCTCCTGGTTTTATTATTCTGGAAATaGAGTGCTTGGTATTCGCCCTTGTCTTTCATAGTGGTTTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: GLVICPNLLVLLFWK*SAWYSPLSFIVVSP Trigger: GGGAGAAACCACTATGAAAGACAAGGGCGAATACCAAGCACTTCATTTCCAGAATAATAAAACCAGGAGGTTAGGGCATATCACTAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR TCA 90 bp | TTCTACCACACTTGGCATGGTCTTTGGGAAGAACTGGTGCATCTGTaGTTTGTAGTGTTTCAAATAGTGTCAAAAGGAAAACCAGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: FYHTWHGLWEELVHL*FVVFQIVSKGKPEV Trigger: CACTTCTGGTTTTCCTTTTGACACTATTTGAAACACTACAAATCACAGATGCACCAGTTCTTCCCAAAGACCATGCCAAGTGTGGTAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR GCA 90 bp | CCATCACAACAGACCAGCAAGCATTCTCACTATATCAACATTTTCTaGCTCTTGTCTATTCCCAAACTACAGTGGTCTGTTGCTAATACT | + |
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Preference number: 1 (lower is better) Translates to: PSQQTSKHSHYINIF*LLSIPKLQWSVANT Trigger: AGTATTAGCAACAGACCACTGTAGTTTGGGAATAGACAAGAGGCAGAAAATGTTGATATAGTGAGAATGCTTGCTGGTCTGTTGTGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR CCA 90 bp | GAATACACAGAGAAGACAGGCGCCGCAAGGAATGCAGGACCCGTCCTCCCTGCCGGGGTGGCCACATCTTaGGTGGCCTGTGGGCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: EYTEKTGAARNAGPVLPAGVATS*VACGLF Trigger: AAACAGCCCACAGGCCACCCAAGATGTGGCCACCCC...GGCAGGGAGGACGGGTCCTGCATTCCTTGCGGCGCCTGTCTTCTCTGTGTATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CAA 90 bp | CCACATGTCCCACCTACCACCACCTATGGTTCCCCTGGGAAGGCCTaGGGCCTGCCACTACACAGGAATTTGCAGCAGGGTCTGCCATTA | + |
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Preference number: 2 (lower is better) Translates to: PHVPPTTTYGSPGKA*GLPLHRNLQQGLPL Trigger: TAATGGCAGACCCTGCTGCAAATTCCTGTGTAGTGGCAGGCCCAAGGCCTTCCCAGGGGAACCATAGGTGGTGGTAGGTGGGACATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAACAAGGAAGTGGGTGGGGTGGCCACATCTTGGGTGGCCTGTGGGCTGTACAAGAGCCACATGGTaGCTTCCCTTTCACATCCAC | + |
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Preference number: 2 (lower is better) Translates to: LSTRKWVGWPHLGWPVGCTRATW*LPFHIH Trigger: GTGGATGTGAAAGGGAAGCCACCATGTGGCTCTTGT...ACAGCCCACAGGCCACCCAAGATGTGGCCACCCCACCCACTTCCTTGTTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGCTCAAGCCAAGCCTCAGGAACCACAGGCACTGGTCACTCCAGGAACTGCATCTGCCTCAGCTGTaGCACCCTCTTCATACCCAC | + |
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Preference number: 2 (lower is better) Translates to: QRLKPSLRNHRHWSLQELHLPQL*HPLHTH Trigger: GTGGGTATGAAGAGGGTGCCACAGCTGAGGCAGATG...CAGTTCCTGGAGTGACCAGTGCCTGTGGTTCCTGAGGCTTGGCTTGAGCCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAGTCCTCAGCACCTAACGGCATTGGGGTGGGGCAGGATGTTCTTTCTGGGTCACAGGGCTGGCATCTaGAACACAGCACAGGTACCA | + |
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Preference number: 2 (lower is better) Translates to: SSPQHLTALGWGRMFFLGHRAGI*NTAQVP Trigger: TGGTACCTGTGCTGTGTTCCAGATGCCAGCCCTGTG...ACCCAGAAAGAACATCCTGCCCCACCCCAATGCCGTTAGGTGCTGAGGACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGCTCAAGCCAAGCCTCAGGAACCACAGGCACTGGTCACTCCAGGAACTGGCCTCGTGGCAGATATaGCGAGGTCTTAGACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: QRLKPSLRNHRHWSLQELASWQI*RGLRLP Trigger: AGGAAGTCTAAGACCTCGCCATATCTGCCACGAGGC...CAGTTCCTGGAGTGACCAGTGCCTGTGGTTCCTGAGGCTTGGCTTGAGCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCTACTTGTTCCAACTCCCCACACCTTTCTTTTCTCCAAATGGCCTAGTGGCGTCTGGCCCTCTCTaGGTGGTGACATGTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GGYLFQLPTPFFSPNGLVASGPL*VVTCSR Trigger: CCTGGAACATGTCACCACTCAGAGAGGGCCAGACGC...CACTAGGCCATTTGGAGAAAAGAAAGGTGTGGGGAGTTGGAACAAGTAGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGAATGGCATGGACACCTATCCCTCCTCTACATCTTCCATCAGGGCTTGGAATGGCCACATCTTGGGTaGCCTGTGGGCTGTTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: GEWHGHLSLLYIFHQGLEWPHLG*PVGCFY Trigger: ATAGAAACAGCCCACAGGCCACCCAAGATGTGGCCA...TTCCAAGCCCTGATGGAAGATGTAGAGGAGGGATAGGTGTCCATGCCATTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CAA 90 bp | ACACTTGTCACTGCTGGACAGAGCAGTCCTCAGCACCTAACGGCATaGGGGTGGGGCAGGATGTTCTTTCTGGGTATAAGGAAGGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: TLVTAGQSSPQHLTA*GWGRMFFLGIRKVN Trigger: ATTGACCTTCCTTATACCCAGAAAGAACATCCTGCCCCACCCCAATGCCGTTAGGTGCTGAGGACTGCTCTGTCCAGCAGTGACAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR GCA 90 bp | GCATTGGGGTGGGGCAGGATGTTCTTTCTGGGTATAAGGAAGGTCAATGTTGAATGTGGTCAACACTGGTaGTTGGTGAGGTGCCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ALGWGRMFFLGIRKVNVECGQHW*LVRCRQ Trigger: CTGCCGGCACCTCACCAAGCACCAGTGTTGACCACA...TTCAACATTGACCTTCCTTATACCCAGAAAGAACATCCTGCCCCACCCCAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CAA 90 bp | ATAATAAAAATCTGTCAACAAGGAAGTGGGTGGGGTGGCCACATCTaGGGTGGCCTGTGGGCTGTTTCTATTGGCCAGCAGCAGGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: IIKICQQGSGWGGHI*GGLWAVSIGQQQVL Trigger: TAGCACCTGCTGCTGGCCAATAGAAACAGCCCACAGGCCACCCAAGATGTGGCCACCCCACCCACTTCCTTGTTGACAGATTTTTATTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR TCA 90 bp | AGCAGTCCTCAGCACCTAACGGCATTGGGGTGGGGCAGGATGTTCTTTCTGGGTGGGAGATGGTGCATTTaGAAACTTCAATTAGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: SSPQHLTALGWGRMFFLGGRWCI*KLQLVP Trigger: AGGCACTAATTGAAGTTTTCAAATGCACCATCTCCC...ACCCAGAAAGAACATCCTGCCCCACCCCAATGCCGTTAGGTGCTGAGGACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR CCA 90 bp | ATAAAACCCAGCTGGCCCACTCTGCTAAGGATGACCTTTAACCTACCTGTGCATGTGGGCTGTTTCTATTaGCCAGCAGCAGGTGCTACC | + |
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Preference number: 2 (lower is better) Translates to: IKPSWPTLLRMTFNLPVHVGCFY*PAAGAT Trigger: GGTAGCACCTGCTGCTGGCCAATAGAAACAGCCCAC...ATGCACAGGTAGGTTAAAGGTCATCCTTAGCAGAGTGGGCCAGCTGGGTTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR CCA 90 bp | GCATTGGGGTGGGGCAGGATGTTCTTTCTGGGTATAAGGAAGGTCAATGTTGAAGGTCACTCCAGGAACTaGGCAGCCCACAGGAAACAT | + |
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Preference number: 2 (lower is better) Translates to: ALGWGRMFFLGIRKVNVEGHSRN*AAHRKH Trigger: ATGTTTCCTGTGGGCTGCCCAGTTCCTGGAGTGACC...TTCAACATTGACCTTCCTTATACCCAGAAAGAACATCCTGCCCCACCCCAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR TCA 90 bp | GCTTCAAATCCTTTAAAAGGGAGGTCACATCACTTCTGGAATACTGGAGACTCCACTCCCCTGCACCGGTaGCCTGGAGTAGGTGACAAA | + |
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Preference number: 2 (lower is better) Translates to: ASNPLKGRSHHFWNTGDSTPLHR*PGVGDK Trigger: TTTGTCACCTACTCCAGGTCACCGGTGCAGGGGAGT...GGAGTCTCCAGTATTCCAGAAGTGATGTGACCTCCCTTTTAAAGGATTTGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR GCA 90 bp | CTACTTGTTCCAACTCCCCACACCTTTCTTTTCTCCAAATGGCCTAGTGATGGGGGTGTCTATGTGGGGTaGTCTACTCGGATGCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LLVPTPHTFLFSKWPSDGGVYVG*STRMLS Trigger: AGAGAGCATCCGAGTAGAGCACCCCACATAGACACC...CCCATCACTAGGCCATTTGGAGAAAAGAAAGGTGTGGGGAGTTGGAACAAGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGACCAGCAAGCATTCTCACTATATCAACATTTTCTGCCTCTTGTCTATTCCCCCACTGTCCCACATCTaGCTCAGCTGTGGCACCCTC | + |
|
Preference number: 2 (lower is better) Translates to: QTSKHSHYINIFCLLSIPPLSHI*LSCGTL Trigger: GAGGGTGCCACAGCTGAGGCAGATGTGGGACAGTGG...GGGAATAGACAAGAGGCAGAAAATGTTGATATAGTGAGAATGCTTGCTGGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | CATGATCCATTGAGGAATGTCTCTCTAATCTGCAAGGCTAAGGAGCACATTGTCAGGAACCACAGGCACTaGTCACTCCAGGAACTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: HDPLRNVSLICKAKEHIVRNHRH*SLQELG Trigger: GCCCAGTTCCTGGAGTGACCAGTGCCTGTGGTTCCT...GACAATGTGCTCCTTAGCCTTGCAGATTAGAGAGACATTCCTCAATGGATCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | ATAAAACCCAGCTGGCCCACTCTGCTAAGGATGACCTTTAACCTACCTGTGCATCTCTGGGGAATGGCATaGACACCTATCCCTCCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: IKPSWPTLLRMTFNLPVHLWGMA*TPIPPL Trigger: TAGAGGAGGGATAGGTGTCCATGCCATTCCCCAGAG...ATGCACAGGTAGGTTAAAGGTCATCCTTAGCAGAGTGGGCCAGCTGGGTTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR GCA 90 bp | CATGATCCATTGAGGAATGTCTCTCTAATCTGCAAGGCTAAGGAGCACATTGTCTTGGCCAGCAGCAGGTaGTACCCAAGAGCAAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: HDPLRNVSLICKAKEHIVLASSR*YPRASP Trigger: AGGACTTGCTCTTGGGTAGCACCTGCTGCTGGCCAA...GACAATGTGCTCCTTAGCCTTGCAGATTAGAGAGACATTCCTCAATGGATCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCTTCTCCAACATCCTCTCTATTGTCTGCTTCTTGTCAGAATTCCTTCATTCATGTTCCAGGGTCTTaGCACAGGCACCAGTCCCGG | + |
|
Preference number: 2 (lower is better) Translates to: SASPTSSLLSASCQNSFIHVPGS*HRHQSR Trigger: CCGGGACTGGTGCCTGTGCCAAGACCCTGGAACATG...AATGAAGGAATTCTGACAAGAAGCAGACAATAGAGAGGATGTTGGAGAAGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | GCATTGGGGTGGGGCAGGATGTTCTTTCTGGGTATAAGGAAGGTCAATGTTGAATGTACACTACAGTGCTaGACCCAGTGCCTTCTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: ALGWGRMFFLGIRKVNVECTLQC*TQCLLG Trigger: TCCAAGAAGGCACTGGGTCCAGCACTGTAGTGTACA...TTCAACATTGACCTTCCTTATACCCAGAAAGAACATCCTGCCCCACCCCAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CAA 90 bp | TTTTCCTCTCCACAACAATACTGCTGCCATCTTATGTCTAAGGTCTaGAACCTCCCATTTGGGTTGTCTGGCCAGGGAAAAGCAAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: FSSPQQYCCHLMSKV*NLPFGLSGQGKARC Trigger: GCACCTTGCTTTTCCCTGGCCAGACAACCCAAATGGGAGGTTCAAGACCTTAGACATAAGATGGCAGCAGTATTGTTGTGGAGAGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | CCACATCTCCATCTGCTTCTAACGTGTGCTTTCGAAGCCTCGTTCCATCCCAGGTATTTTCAATCCTCCTaGCTGCATACCAGATGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: PHLHLLLTCAFEASFHPRYFQSS*LHTRCF Trigger: GAAACATCTGGTATGCAGCCAGGAGGATTGAAAATA...CCTGGGATGGAACGAGGCTTCGAAAGCACACGTTAGAAGCAGATGGAGATGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCTTCTCCAACATCCTCTCTATTGTCTGCTTCTTGTCAGAATTCCTTCATTCACAGAGCCCCCAGATaGTCTGACAGTGCTAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SASPTSSLLSASCQNSFIHRAPR*SDSARV Trigger: CACCCTAGCACTGTCAGACCATCTGGGGGCTCTGTG...AATGAAGGAATTCTGACAAGAAGCAGACAATAGAGAGGATGTTGGAGAAGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | ATAAAACCCAGCTGGCCCACTCTGCTAAGGATGACCTTTAACCTACCTGTGCATAGTCACAATTGCCTCTaGAAAGTGAGGCCAGCTATG | + |
|
Preference number: 2 (lower is better) Translates to: IKPSWPTLLRMTFNLPVHSHNCL*KVRPAM Trigger: CATAGCTGGCCTCACTTTCCAGAGGCAATTGTGACT...ATGCACAGGTAGGTTAAAGGTCATCCTTAGCAGAGTGGGCCAGCTGGGTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGGAATGGCATGGACACCTATCCCTCCTCTACATCTTCCATCAGGGCTTGGAACCCACAGGAAACATTTaGAAAGTAAACCACTCAATT | + |
|
Preference number: 2 (lower is better) Translates to: GEWHGHLSLLYIFHQGLEPTGNI*KVNHSI Trigger: AATTGAGTGGTTTACTTTTCAAATGTTTCCTGTGGG...TTCCAAGCCCTGATGGAAGATGTAGAGGAGGGATAGGTGTCCATGCCATTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR GCA 90 bp | ATAAAACCCAGCTGGCCCACTCTGCTAAGGATGACCTTTAACCTACCTGTGCATTATGACAGTCACAATTaGCTCTGGAAAGTGAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: IKPSWPTLLRMTFNLPVHYDSHN*LWKVRP Trigger: TGGCCTCACTTTCCAGAGGCAATTGTGACTGTCATA...ATGCACAGGTAGGTTAAAGGTCATCCTTAGCAGAGTGGGCCAGCTGGGTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTTCAGGTATACATCATCATCAGAACAGAACACATGTAAGCATGCCTATACCATTCCTCTGCTCTGTGTaGTGGACAGCCCTGCTCATC | + |
|
Preference number: 2 (lower is better) Translates to: PSGIHHHQNRTHVSMPIPFLCSV*WTALLI Trigger: GATGAGCAGGGCTGTCCACCACACAGAGCAGAGGAA...TGGTATAGGCATGCTTACATGTGTTCTGTTCTGATGATGATGTATACCTGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | CATGATCCATTGAGGAATGTCTCTCTAATCTGCAAGGCTAAGGAGCACATTGTCAATACTGGAGACTCCTaGGGTCAGCCAATAGGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: HDPLRNVSLICKAKEHIVNTGDS*GQPIGF Trigger: GAACCCTATTGGCTGACCCCAGGAGTCTCCAGTATT...GACAATGTGCTCCTTAGCCTTGCAGATTAGAGAGACATTCCTCAATGGATCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | ATAAAACCCAGCTGGCCCACTCTGCTAAGGATGACCTTTAACCTACCTGTGCATTTAAAGCAAAACAAGTaGCCACATGTCCCACCTACC | + |
|
Preference number: 2 (lower is better) Translates to: IKPSWPTLLRMTFNLPVHLKQNK*PHVPPT Trigger: GGTAGGTGGGACATGTGGCCACTTGTTTTGCTTTAA...ATGCACAGGTAGGTTAAAGGTCATCCTTAGCAGAGTGGGCCAGCTGGGTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTTCAGGTATACATCATCATCAGAACAGAACACATGTAAGCATGCCTATACCAGGAAGACAAGAGCTCTaGGAACTGGGAGCCAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: PSGIHHHQNRTHVSMPIPGRQEL*ELGARH Trigger: GTGTCTGGCTCCCAGTTCCCAGAGCTCTTGTCTTCC...TGGTATAGGCATGCTTACATGTGTTCTGTTCTGATGATGATGTATACCTGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCTTCTCCAACATCCTCTCTATTGTCTGCTTCTTGTCAGAATTCCTTCATTTCACTTCTGGAATACTaGAGACTCCTGGGGTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SASPTSSLLSASCQNSFISLLEY*RLLGSA Trigger: GGCTGACCCCAGGAGTCTCCAGTATTCCAGAAGTGA...AATGAAGGAATTCTGACAAGAAGCAGACAATAGAGAGGATGTTGGAGAAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR TCA 90 bp | ATAAAACCCAGCTGGCCCACTCTGCTAAGGATGACCTTTAACCTACCTGTGCATCAACAACCCTCAACATaGTTAAGTATCCTGAATTGG | + |
|
Preference number: 2 (lower is better) Translates to: IKPSWPTLLRMTFNLPVHQQPST*LSILNW Trigger: CCAATTCAGGATACTTAATCATGTTGAGGGTTGTTG...ATGCACAGGTAGGTTAAAGGTCATCCTTAGCAGAGTGGGCCAGCTGGGTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGACCAGCAAGCATTCTCACTATATCAACATTTTCTGCCTCTTGTCTATTCCCCACTACACAGGAATTTaGAGCAGGGTCTGCCATTAC | + |
|
Preference number: 2 (lower is better) Translates to: QTSKHSHYINIFCLLSIPHYTGI*SRVCHY Trigger: GTAATGGCAGACCCTGCTGCAAATTCCTGTGTAGTG...GGGAATAGACAAGAGGCAGAAAATGTTGATATAGTGAGAATGCTTGCTGGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTTCAGGTATACATCATCATCAGAACAGAACACATGTAAGCATGCCTATACCAATACATGCCTGTTCTTaGCCCCCTCTTGTTCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: PSGIHHHQNRTHVSMPIPIHACS*PPLVPS Trigger: GGAAGGAACAAGAGGGGGCCAAGAACAGGCATGTAT...TGGTATAGGCATGCTTACATGTGTTCTGTTCTGATGATGATGTATACCTGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR TCA 90 bp | CATCTCTTAAATTGCAGATTCAGAAGCCATCAAAAGTCAGAGCTGGAATTACCTCCCCCAAACTTGCTATaGCAGTCACAATTGCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HLLNCRFRSHQKSELELPPPNLL*QSQLPL Trigger: CAGAGGCAATTGTGACTGTCATAGCAAGTTTGGGGG...AGGTAATTCCAGCTCTGACTTTTGATGGCTTCTGAATCTGCAATTTAAGAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR TCA 90 bp | TCAGCTTCTCCAACATCCTCTCTATTGTCTGCTTCTTGTCAGAATTCCTTCATTACAGGATGTCCCAGATaGTGTGCAGACAAAAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SASPTSSLLSASCQNSFITGCPR*CADKSQ Trigger: TTGGCTTTTGTCTGCACATCATCTGGGACATCCTGT...AATGAAGGAATTCTGACAAGAAGCAGACAATAGAGAGGATGTTGGAGAAGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR GCA 90 bp | CCTTCAGGTATACATCATCATCAGAACAGAACACATGTAAGCATGCCTATACCAACCAATGGGCCATGGTaGAGTGATTTAAGATCACCC | + |
|
Preference number: 2 (lower is better) Translates to: PSGIHHHQNRTHVSMPIPTNGPW*SDLRSP Trigger: GGGTGATCTTAAATCACTGCACCATGGCCCATTGGT...TGGTATAGGCATGCTTACATGTGTTCTGTTCTGATGATGATGTATACCTGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGACCAGCAAGCATTCTCACTATATCAACATTTTCTGCCTCTTGTCTATTCCCGAGCTGGAATTACCTTaGAGGCTACTTGTTCCAACT | + |
|
Preference number: 2 (lower is better) Translates to: QTSKHSHYINIFCLLSIPELELP*RLLVPT Trigger: AGTTGGAACAAGTAGCCTCCAAGGTAATTCCAGCTC...GGGAATAGACAAGAGGCAGAAAATGTTGATATAGTGAGAATGCTTGCTGGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | CATGATCCATTGAGGAATGTCTCTCTAATCTGCAAGGCTAAGGAGCACATTGTCTGCATACTAGGTAATTaGGAAAAGGGTCCCTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: HDPLRNVSLICKAKEHIVCILGN*EKGPSR Trigger: TCTTGAGGGACCCTTTTCCCAATTACCTAGTATGCA...GACAATGTGCTCCTTAGCCTTGCAGATTAGAGAGACATTCCTCAATGGATCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTCAGGTATACATCATCATCAGAACAGAACACATGTAAGCATGCCTATACCAACACAAGAGGCTATATaGAAAGACCTCTCCCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PSGIHHHQNRTHVSMPIPTQEAI*KDLSPS Trigger: AGAGGGGGAGAGGTCTTTCCATATAGCCTCTTGTGT...TGGTATAGGCATGCTTACATGTGTTCTGTTCTGATGATGATGTATACCTGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR CAA 90 bp | CTCTTGCATTCCAGATCCTACTCAGCTTCTCCAACATCCTCTCTATaGTCTGCTTCTTGTCAGAATTCCTTCATTTCCATTAAGCCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLHSRSYSASPTSSL*SASCQNSFISIKPF Trigger: AAAGGGCTTAATGGAAATGAAGGAATTCTGACAAGAAGCAGACAATAGAGAGGATGTTGGAGAAGCTGAGTAGGATCTGGAATGCAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR GCA 90 bp | CATGATCCATTGAGGAATGTCTCTCTAATCTGCAAGGCTAAGGAGCACATTGTCCCCCATCTCTTAAATTaGAGATTCAGAAGCCATCAA | + |
|
Preference number: 2 (lower is better) Translates to: HDPLRNVSLICKAKEHIVPHLLN*RFRSHQ Trigger: TTGATGGCTTCTGAATCTGCAATTTAAGAGATGGGG...GACAATGTGCTCCTTAGCCTTGCAGATTAGAGAGACATTCCTCAATGGATCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| 3UTR-3UTR CCA 90 bp | GCTTCAAATCCTTTAAAAGGGAGGTCACATCACTTCTGGAATACTGGAGACTCCACTGAAGTCAGAGACTaGAGACAGTATTTTCAATCC | + |
|
Preference number: 2 (lower is better) Translates to: ASNPLKGRSHHFWNTGDSTEVRD*RQYFQS Trigger: GGATTGAAAATACTGTCTCCAGTCTCTGACTTCAGT...GGAGTCTCCAGTATTCCAGAAGTGATGTGACCTCCCTTTTAAAGGATTTGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | CATCTCTTAAATTGCAGATTCAGAAGCCATCAAAAGTCAGAGCTGGAATTACCTAAGACAAGAGCCACATaGTGGCTTCCCTTTCACATC | + |
|
Preference number: 2 (lower is better) Translates to: HLLNCRFRSHQKSELELPKTRAT*WLPFHI Trigger: GATGTGAAAGGGAAGCCACCATGTGGCTCTTGTCTT...AGGTAATTCCAGCTCTGACTTTTGATGGCTTCTGAATCTGCAATTTAAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | CATGATCCATTGAGGAATGTCTCTCTAATCTGCAAGGCTAAGGAGCACATTGTCTACTCGGATGCTCTCTaGACTGTTTTTGCATTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: HDPLRNVSLICKAKEHIVYSDAL*TVFAFS Trigger: ACTAAATGCAAAAACAGTCCAGAGAGCATCCGAGTA...GACAATGTGCTCCTTAGCCTTGCAGATTAGAGAGACATTCCTCAATGGATCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGACCAGCAAGCATTCTCACTATATCAACATTTTCTGCCTCTTGTCTATTCCCGGTTTAATTCTTGGTTaGAAGATGGAATCAGGTACA | + |
|
Preference number: 2 (lower is better) Translates to: QTSKHSHYINIFCLLSIPGLILG*KMESGT Trigger: TGTACCTGATTCCATCTTTCAACCAAGAATTAAACC...GGGAATAGACAAGAGGCAGAAAATGTTGATATAGTGAGAATGCTTGCTGGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CCA 90 bp | CATCTCTTAAATTGCAGATTCAGAAGCCATCAAAAGTCAGAGCTGGAATTACCTTTTCTTTTCTCCAAATaGCCTAGTGATGGGACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: HLLNCRFRSHQKSELELPFLFSK*PSDGTG Trigger: TCCTGTCCCATCACTAGGCCATTTGGAGAAAAGAAA...AGGTAATTCCAGCTCTGACTTTTGATGGCTTCTGAATCTGCAATTTAAGAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | GGAAGTGGGTGGGGTGGCCACATCTTGGGTGGCCTGTaGGCTGTTTCTATTGGCCAGCAGCAGGTGCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: GSGWGGHILGGL*AVSIGQQQVLP Trigger: GGGTAGCACCTGCTGCTGGCCAATAGAAACAGCCCACAGGCCACCCAAGATGTGGCCACCCCACCCACTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR TCA 72 bp | GCAGGACCCGTCCTCCCTGCCACTCCCCTGCACCGGTaGCCTGGAGTAGGTGACAAAATCAAGCACCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: AGPVLPATPLHR*PGVGDKIKHPK Trigger: CTTTGGGTGCTTGATTTTGTCACCTACTCCAGGTCACCGGTGCAGGGGAGTGGCAGGGAGGACGGGTCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR GCA 72 bp | AACAGAATACACAGAGAAGACAGGCGCCGCAAGGAATaGAGGACCCGTCCTCCCTGCCACTCCCCTGCACCG | + |
|
Preference number: 3 (lower is better) Translates to: NRIHREDRRRKE*RTRPPCHSPAP Trigger: CGGTGCAGGGGAGTGGCAGGGAGGACGGGTCCTGCATTCCTTGCGGCGCCTGTCTTCTCTGTGTATTCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | CAAACCCCACCCACTGTCCCACATCTGCCTCAGCTGTaGCACCCTCTTCATACCCACGGCTCAGTAGTCGGC | + |
|
Preference number: 3 (lower is better) Translates to: QTPPTVPHLPQL*HPLHTHGSVVG Trigger: GCCGACTACTGAGCCGTGGGTATGAAGAGGGTGCCACAGCTGAGGCAGATGTGGGACAGTGGGTGGGGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR TCA 72 bp | ATGTTTCCTTCCCGGCGTCTGGCCCTCTCTGAGTGGTaGCATGTTCCAGGGTCTTGGCACAGGCACCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: MFPSRRLALSEW*HVPGSWHRHQS Trigger: GGACTGGTGCCTGTGCCAAGACCCTGGAACATGTCACCACTCAGAGAGGGCCAGACGCCGGGAAGGAAACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR GCA 72 bp | CCACCACCTATGGTTCCCCTGGGAAGGCCTTGGGCCTaGCACTACACAGGAATTTGCAGCAGGGTCTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PPPMVPLGRPWA*HYTGICSRVCH Trigger: ATGGCAGACCCTGCTGCAAATTCCTGTGTAGTGGCAGGCCCAAGGCCTTCCCAGGGGAACCATAGGTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | TCAACAAGGAAGTGGGTGGGGTGGCCACATCTTGGGTaGCCTGTGGGCTGTTTCTATTGGCCAGCAGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: STRKWVGWPHLG*PVGCFYWPAAG Trigger: ACCTGCTGCTGGCCAATAGAAACAGCCCACAGGCCACCCAAGATGTGGCCACCCCACCCACTTCCTTGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | TCTGTCAACAAGGAAGTGGGTGGGGTGGCCACATCTTaGGTGGCCTGTGGGCTGTTTCTATTGGCCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SVNKEVGGVATS*VACGLFLLASS Trigger: GCTGCTGGCCAATAGAAACAGCCCACAGGCCACCCAAGATGTGGCCACCCCACCCACTTCCTTGTTGACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | CAAAGGCTCAAGCCAAGCCTCAGGAACCACAGGCACTaGTCACTCCAGGAACTGGGCAGCCCACAGGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: QRLKPSLRNHRH*SLQELGSPQET Trigger: TGTTTCCTGTGGGCTGCCCAGTTCCTGGAGTGACCAGTGCCTGTGGTTCCTGAGGCTTGGCTTGAGCCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CAA 90 bp | CAATTAGCTGCCTCGTGGCAGATATGGCGAGGTCTTAGACTTCCTCTGCTCTGTTGGGGTGGCCACATCTaGGGTGGCCTGTGGGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QLAASWQIWRGLRLPLLCWGGHI*GGLWAV Trigger: AACAGCCCACAGGCCACCCAAGATGTGGCCACCCCA...ACAGAGCAGAGGAAGTCTAAGACCTCGCCATATCTGCCACGAGGCAGCTAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR TCA 72 bp | ATACCAGATGTTTCCTTCCCGGCGTCTGGCCCTCTCTaGGTGGTGACATGTTCCAGGGTCTTGGCACAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: IPDVSFPASGPL*VVTCSRVLAQA Trigger: TGCCTGTGCCAAGACCCTGGAACATGTCACCACTCAGAGAGGGCCAGACGCCGGGAAGGAAACATCTGGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | TCCTGGCTGCATACCAGATGTTTCCTTCCCGGCGTCTaGCCCTCTCTGAGTGGTGACATGTTCCAGGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SWLHTRCFLPGV*PSLSGDMFQGL Trigger: AAGACCCTGGAACATGTCACCACTCAGAGAGGGCCAGACGCCGGGAAGGAAACATCTGGTATGCAGCCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | TGGCCACATCTTGGGTGGCCTGTGGGCTGTTTCTATTaGCCAGCAGCAGGTGCTACCCAAGAGCAAGTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: WPHLGWPVGCFY*PAAGATQEQVL Trigger: TAGGACTTGCTCTTGGGTAGCACCTGCTGCTGGCCAATAGAAACAGCCCACAGGCCACCCAAGATGTGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | CCCCCAAGACGCAGTCCAGATGGTCACCTGCTTCACTaGCTCAACCATAGCACCCTAGCCGGAATACTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PPRRSPDGHLLH*LNHSTLAGILR Trigger: TCTGAGTATTCCGGCTAGGGTGCTATGGTTGAGCCAGTGAAGCAGGTGACCATCTGGACTGCGTCTTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR GCA 72 bp | GGTGCTGAGCTATGTACACTACAGTGCTGGACCCAGTaGCTTCTTGGATGCAACAGGTCACAGGGCTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GAELCTLQCWTQ*LLGCNRSQGWH Trigger: ATGCCAGCCCTGTGACCTGTTGCATCCAAGAAGGCACTGGGTCCAGCACTGTAGTGTACATAGCTCAGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR GCA 72 bp | AAGAGCTCTGGGAACTGGGAGCCAGACACTTGTCACTaGTGGACAGAGCAGTCCTCAGCACCTAACGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: KSSGNWEPDTCH*WTEQSSAPNGI Trigger: AATGCCGTTAGGTGCTGAGGACTGCTCTGTCCAGCAGTGACAAGTGTCTGGCTCCCAGTTCCCAGAGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | GGGAGGTCACATCACTTCTGGAATACTGGAGACTCCTaGGGTCAGCCAATAGGGTTCAGAGGCCTCAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: GRSHHFWNTGDS*GQPIGFRGLSI Trigger: GATGCTGAGGCCTCTGAACCCTATTGGCTGACCCCAGGAGTCTCCAGTATTCCAGAAGTGATGTGACCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | GGACAGAGCAGTCCTCAGCACCTAACGGCATTGGGGTaGGGCAGGATGTTCTTTCTGGGTATAAGGAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GQSSPQHLTALG*GRMFFLGIRKV Trigger: GACCTTCCTTATACCCAGAAAGAACATCCTGCCCCACCCCAATGCCGTTAGGTGCTGAGGACTGCTCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | TTCCATCAGGGCTTGGAAGACAAGAGCTCTGGGAACTaGGAGCCAGACACTTGTCACTGCTGGACAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FHQGLEDKSSGN*EPDTCHCWTEQ Trigger: CTGCTCTGTCCAGCAGTGACAAGTGTCTGGCTCCCAGTTCCCAGAGCTCTTGTCTTCCAAGCCCTGATGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR TCA 72 bp | CCATTTGGGTTGTCTGGCCAGGGAAAAGCAAGGTGCTaGGCTATGTACACTACAGTGCTGGACCCAGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PFGLSGQGKARC*AMYTTVLDPVP Trigger: AGGCACTGGGTCCAGCACTGTAGTGTACATAGCTCAGCACCTTGCTTTTCCCTGGCCAGACAACCCAAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR GCA 72 bp | TGGGCCTGCCACTACACAGGAATTTGCAGCAGGGTCTaGCATTACATGCCAGGGCTTAATTGGGATGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: WACHYTGICSRV*HYMPGLNWDGR Trigger: CCTACCATCCCAATTAAGCCCTGGCATGTAATGGCAGACCCTGCTGCAAATTCCTGTGTAGTGGCAGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | AGGGAGCGTGCTCCACTTCGGTGCATACTAGGTAATTaGGAAAAGGGTCCCTCAAGACACCGGGTGAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: RERAPLRCILGN*EKGPSRHRVST Trigger: AGTACTCACCCGGTGTCTTGAGGGACCCTTTTCCCAATTACCTAGTATGCACCGAAGTGGAGCACGCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | GCTATGTACACTACAGTGCTGGACCCAGTGCCTTCTTaGATGCAACAGGTCACAGGGCTGGCATCTGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: AMYTTVLDPVPS*MQQVTGLASGT Trigger: TGTTCCAGATGCCAGCCCTGTGACCTGTTGCATCCAAGAAGGCACTGGGTCCAGCACTGTAGTGTACATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | CTACATCTTCCATCAGGGCTTGGAAGACAAGAGCTCTaGGAACTGGGAGCCAGACACTTGTCACTGCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LHLPSGLGRQEL*ELGARHLSLLD Trigger: GTCCAGCAGTGACAAGTGTCTGGCTCCCAGTTCCCAGAGCTCTTGTCTTCCAAGCCCTGATGGAAGATGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | GACACCTATCCCTCCTCTACATCTTCCATCAGGGCTTaGAAGACAAGAGCTCTGGGAACTGGGAGCCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: DTYPSSTSSIRA*KTRALGTGSQT Trigger: TGTCTGGCTCCCAGTTCCCAGAGCTCTTGTCTTCCAAGCCCTGATGGAAGATGTAGAGGAGGGATAGGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR GCA 72 bp | ACAAATAACACAAAGACAGACGTGAGGGCCAGAGCATaGAGGTGCTCTTCCTGTACTCACTGGGCACACCCT | + |
|
Preference number: 3 (lower is better) Translates to: TNNTKTDVRARA*RCSSCTHWAHP Trigger: AGGGTGTGCCCAGTGAGTACAGGAAGAGCACCTGCATGCTCTGGCCCTCACGTCTGTCTTTGTGTTATTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR GCA 72 bp | TCCTGTGCTGGATGTACCATGAGCATTTCTGTAGTCTaGCAAGCACCCTGTGCAGGCGGTATCCTTGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: SCAGCTMSISVV*QAPCAGGILGF Trigger: GAATCCAAGGATACCGCCTGCACAGGGTGCTTGGCAGACTACAGAAATGCTCATGGTACATCCAGCACAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | AGGATGTCCCAGATGATGTGCAGACAAAAGCCAAGCTaGGTCAAGAACCCAGGCTATGAACTCGGGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RMSQMMCRQKPS*VKNPGYELGSS Trigger: ACTGGACCCGAGTTCATAGCCTGGGTTCTTGACCCAGCTTGGCTTTTGTCTGCACATCATCTGGGACATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | GCCTCAGGAACCACAGGCACTGGTCACTCCAGGAACTaGGCAGCCCACAGGAAACATTTGAAAAGTAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: ASGTTGTGHSRN*AAHRKHLKSKP Trigger: TGGTTTACTTTTCAAATGTTTCCTGTGGGCTGCCCAGTTCCTGGAGTGACCAGTGCCTGTGGTTCCTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | TGCAGCAGGGTCTGCCATTACATGCCAGGGCTTAATTaGGATGGTAGGCTTCTGCACAAAAGGCAAGCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CSRVCHYMPGLN*DGRLLHKRQAS Trigger: AGACGCTTGCCTTTTGTGCAGAAGCCTACCATCCCAATTAAGCCCTGGCATGTAATGGCAGACCCTGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAACCCAGCTGGCCCACTCTGCTAAGGATGACCTTTAACCTACCTGTGCATGGACCCAGTGCCTTCTaGGATGCAACAGGTCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: IKPSWPTLLRMTFNLPVHGPSAF*DATGHR Trigger: CCTGTGACCTGTTGCATCCAAGAAGGCACTGGGTCC...ATGCACAGGTAGGTTAAAGGTCATCCTTAGCAGAGTGGGCCAGCTGGGTTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGTCCTCAGCACCTAACGGCATTGGGGTGGGGCAGGATGTTCTTTCTGGGTGTTCCTACTAACCTCTaGCATTCCAGATCCTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSPQHLTALGWGRMFFLGVPTNL*HSRSYS Trigger: TGAGTAGGATCTGGAATGCAAGAGGTTAGTAGGAAC...ACCCAGAAAGAACATCCTGCCCCACCCCAATGCCGTTAGGTGCTGAGGACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR TCA 72 bp | CTGAGACCAGGGACAGCTAAAGCAGCTGGATACCATTaGAGACAAGAGCCACATGGTGGCTTCCCTTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LRPGTAKAAGYH*RQEPHGGFPFT Trigger: TGTGAAAGGGAAGCCACCATGTGGCTCTTGTCTTCAATGGTATCCAGCTGCTTTAGCTGTCCCTGGTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR TCA 72 bp | TCCAAATGGCCTAGTGATGGGACAGGATGTCCCAGATaGTGTGCAGACAAAAGCCAAGCTGGGTCAAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: SKWPSDGTGCPR*CADKSQAGSRT Trigger: GGTTCTTGACCCAGCTTGGCTTTTGTCTGCACATCATCTGGGACATCCTGTCCCATCACTAGGCCATTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR GCA 72 bp | TGTGCCAGCCCCCAAACTTGCTATGACAGTCACAATTaGCTCTGGAAAGTGAGGCCAGCTATGTTTGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: CASPQTCYDSHN*LWKVRPAMFAS Trigger: ACTGGCAAACATAGCTGGCCTCACTTTCCAGAGGCAATTGTGACTGTCATAGCAAGTTTGGGGGCTGGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR GCA 72 bp | AGGGAAAAGCAAGGTGCTGAGCTATGTACACTACAGTaGTGGACCCAGTGCCTTCTTGGATGCAACAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: REKQGAELCTLQ*WTQCLLGCNRS Trigger: TGACCTGTTGCATCCAAGAAGGCACTGGGTCCAGCACTGTAGTGTACATAGCTCAGCACCTTGCTTTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR GCA 72 bp | TACACTGAAAAGCAAGGCCAGTGTCTCAGGTCTCCCTaGACCTATGTCCTGTGCTGGATGTACCATGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: YTEKQGQCLRSP*TYVLCWMYHEH Trigger: ATGCTCATGGTACATCCAGCACAGGACATAGGTGCAGGGAGACCTGAGACACTGGCCTTGCTTTTCAGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | GAAAAGCAAGGTGCTGAGCTATGTACACTACAGTGCTaGACCCAGTGCCTTCTTGGATGCAACAGGTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: EKQGAELCTLQC*TQCLLGCNRSQ Trigger: CTGTGACCTGTTGCATCCAAGAAGGCACTGGGTCCAGCACTGTAGTGTACATAGCTCAGCACCTTGCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CAA 90 bp | GCATTGGGGTGGGGCAGGATGTTCTTTCTGGGTATAAGGAAGGTCAATGTTGAAGTGCAGGCGGTATCCTaGGATTCTGTGTCCCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ALGWGRMFFLGIRKVNVEVQAVS*DSVSLY Trigger: ATACAGGGACACAGAATCCAAGGATACCGCCTGCAC...TTCAACATTGACCTTCCTTATACCCAGAAAGAACATCCTGCCCCACCCCAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR TCA 72 bp | GTCACTCCAGGAACTGGGCAGCCCACAGGAAACATTTaGAAAGTAAACCACTCAATTAGCTGCCTCGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VTPGTGQPTGNI*KVNHSISCLVA Trigger: TGCCACGAGGCAGCTAATTGAGTGGTTTACTTTTCAAATGTTTCCTGTGGGCTGCCCAGTTCCTGGAGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR TCA 72 bp | AACTCACTTCCTTCATCCCCAGGCTTTATCTGGTTCTaGACACTCTGGGGAATGGCATGGACACCTATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: NSLPSSPGFIWF*TLWGMAWTPIP Trigger: AGGGATAGGTGTCCATGCCATTCCCCAGAGTGTTCAGAACCAGATAAAGCCTGGGGATGAAGGAAGTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | TCCTTTAAAAGGGAGGTCACATCACTTCTGGAATACTaGAGACTCCTGGGGTCAGCCAATAGGGTTCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SFKREVTSLLEY*RLLGSANRVQR Trigger: CCTCTGAACCCTATTGGCTGACCCCAGGAGTCTCCAGTATTCCAGAAGTGATGTGACCTCCCTTTTAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | AGGATGACCTTTAACCTACCTGTGCATCACTCTCCTTaGGCTACAGGCTTGATCTTCTCTCAGCCTCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: RMTFNLPVHHSP*ATGLIFSQPHD Trigger: GTCATGAGGCTGAGAGAAGATCAAGCCTGTAGCCCAAGGAGAGTGATGCACAGGTAGGTTAAAGGTCATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR GCA 72 bp | ATTACATGCCAGGGCTTAATTGGGATGGTAGGCTTCTaGACAAAAGGCAAGCGTCTTCCAGAGAGGACACAA | + |
|
Preference number: 3 (lower is better) Translates to: ITCQGLIGMVGF*TKGKRLPERTQ Trigger: TTGTGTCCTCTCTGGAAGACGCTTGCCTTTTGTGCAGAAGCCTACCATCCCAATTAAGCCCTGGCATGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | GGGTGTCTATGTGGGGTGCTCTACTCGGATGCTCTCTaGACTGTTTTTGCATTTAGTCTAGTACTTGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GCLCGVLYSDAL*TVFAFSLVLVV Trigger: GACCACAAGTACTAGACTAAATGCAAAAACAGTCCAGAGAGCATCCGAGTAGAGCACCCCACATAGACACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | GCTTCAAATCCTTTAAAAGGGAGGTCACATCACTTCTaGAATACTGGAGACTCCTGGGGTCAGCCAATAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ASNPLKGRSHHF*NTGDSWGQPIG Trigger: CCCTATTGGCTGACCCCAGGAGTCTCCAGTATTCCAGAAGTGATGTGACCTCCCTTTTAAAGGATTTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | ATTCCTAGGCGTGCAGGCTTTCTACCACACTTGGCATaGTCTTTGGGAAGAACTGGTGCATCTGTGATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: IPRRAGFLPHLA*SLGRTGASVIC Trigger: ACAAATCACAGATGCACCAGTTCTTCCCAAAGACCATGCCAAGTGTGGTAGAAAGCCTGCACGCCTAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTGTTTCTGTTCCTACTAACCTCTTGCATTCCAGATCCTACTCAGCTTCTCCACTACACAGGAATTaGCAGCAGGGTCTGCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: LPVSVPTNLLHSRSYSASPLHRN*QQGLPL Trigger: TAATGGCAGACCCTGCTGCAAATTCCTGTGTAGTGG...AGAAGCTGAGTAGGATCTGGAATGCAAGAGGTTAGTAGGAACAGAAACAGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR TCA 72 bp | CACAACAATACTGCTGCCATCTTATGTCTAAGGTCTTaGACCTCCCATTTGGGTTGTCTGGCCAGGGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HNNTAAILCLRS*TSHLGCLAREK Trigger: CTTTTCCCTGGCCAGACAACCCAAATGGGAGGTTCAAGACCTTAGACATAAGATGGCAGCAGTATTGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR TCA 72 bp | TCCTTGGGCTACAGGCTTGATCTTCTCTCAGCCTCATaGCCAAGACATAGTGATTTGGCCCTGATCTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: SLGYRLDLLSAS*PRHSDLALISF Trigger: AAATGAGATCAGGGCCAAATCACTATGTCTTGGTCATGAGGCTGAGAGAAGATCAAGCCTGTAGCCCAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | TCCCTCCTCGTAGCCGTTCATAGCTGGTCACAACCATaGTCCTGTAGTTCATGTTATAACTCACTTCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLLVAVHSWSQP*SCSSCYNSLPS Trigger: TGAAGGAAGTGAGTTATAACATGAACTACAGGACCATGGTTGTGACCAGCTATGAACGGCTACGAGGAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CAA 90 bp | GCATTGGGGTGGGGCAGGATGTTCTTTCTGGGTATAAGGAAGGTCAATGTTGAATCCCCATCTCTTAAATaGCAGATTCAGAAGCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: ALGWGRMFFLGIRKVNVESPSLK*QIQKPS Trigger: TGATGGCTTCTGAATCTGCAATTTAAGAGATGGGGA...TTCAACATTGACCTTCCTTATACCCAGAAAGAACATCCTGCCCCACCCCAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTGTTTCTGTTCCTACTAACCTCTTGCATTCCAGATCCTACTCAGCTTCTCTTATGTCTAAGGTCTaGAACCTCCCATTTGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LPVSVPTNLLHSRSYSASLMSKV*NLPFGL Trigger: CAACCCAAATGGGAGGTTCAAGACCTTAGACATAAG...AGAAGCTGAGTAGGATCTGGAATGCAAGAGGTTAGTAGGAACAGAAACAGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR TCA 72 bp | CCTGAAGCAGCCCACATGTGCTTTACAGAAGACAACTaGAGTCAGAGACTGGAGACAGTATTTTCAATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PEAAHMCFTEDN*SQRLETVFSIL Trigger: GAGGATTGAAAATACTGTCTCCAGTCTCTGACTTCAGTTGTCTTCTGTAAAGCACATGTGGGCTGCTTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR TCA 72 bp | AAACTTGCTATGACAGTCACAATTGCCTCTGGAAAGTaGGGCCAGCTATGTTTGCCAGTCACTCTAGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: KLAMTVTIASGK*GQLCLPVTLAS Trigger: AGATGCTAGAGTGACTGGCAAACATAGCTGGCCTCACTTTCCAGAGGCAATTGTGACTGTCATAGCAAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | TTCAGAAGCCATCAAAAGTCAGAGCTGGAATTACCTTaGAGGCTACTTGTTCCAACTCCCCACACCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FRSHQKSELELP*RLLVPTPHTFL Trigger: AAGAAAGGTGTGGGGAGTTGGAACAAGTAGCCTCCAAGGTAATTCCAGCTCTGACTTTTGATGGCTTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | AATGAGAAATCTACGAACATTAGCACCAATGGGCCATaGTGCAGTGATTTAAGATCACCCAGCCCAGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: NEKSTNISTNGP*CSDLRSPSPVQ Trigger: CTGTACTGGGCTGGGTGATCTTAAATCACTGCACCATGGCCCATTGGTGCTAATGTTCGTAGATTTCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR TCA 72 bp | GAAATGAGGCTGGACATGTATCCTGAGTTCATCTCATaGTCCATTGAGGAATGTCTCTCTAATCTGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: EMRLDMYPEFIS*SIEECLSNLQG Trigger: GCCTTGCAGATTAGAGAGACATTCCTCAATGGATCATGAGATGAACTCAGGATACATGTCCAGCCTCATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | ACATGTGCTTTACAGAAGACAACTGAAGTCAGAGACTaGAGACAGTATTTTCAATCCTCCTGGCTGCATACC | + |
|
Preference number: 3 (lower is better) Translates to: TCALQKTTEVRD*RQYFQSSWLHT Trigger: GGTATGCAGCCAGGAGGATTGAAAATACTGTCTCCAGTCTCTGACTTCAGTTGTCTTCTGTAAAGCACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CCA 72 bp | AACATTTTCTGCCTCTTGTCTATTCCCAAACTACAGTaGTCTGTTGCTAATACTGAGTTTGTCCTGGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: NIFCLLSIPKLQ*SVANTEFVLGV Trigger: CACCCCCAGGACAAACTCAGTATTAGCAACAGACCACTGTAGTTTGGGAATAGACAAGAGGCAGAAAATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR GCA 72 bp | CACCAGTCATGTTCAGTTTGTCCCCATCTCTTAAATTaGAGATTCAGAAGCCATCAAAAGTCAGAGCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HQSCSVCPHLLN*RFRSHQKSELE Trigger: TTCCAGCTCTGACTTTTGATGGCTTCTGAATCTGCAATTTAAGAGATGGGGACAAACTGAACATGACTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCAGGTATACATCATCATCAGAACAGAACACATGTAAGCATGCCTATACCACTGGAAATGAAGTGCTaGGTATTCGCCCTTGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PSGIHHHQNRTHVSMPIPLEMKC*VFALVF Trigger: AAAGACAAGGGCGAATACCAAGCACTTCATTTCCAG...TGGTATAGGCATGCTTACATGTGTTCTGTTCTGATGATGATGTATACCTGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR GCA 72 bp | CAGACCAGCAAGCATTCTCACTATATCAACATTTTCTaGCTCTTGTCTATTCCCAAACTACAGTGGTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QTSKHSHYINIF*LLSIPKLQWSV Trigger: AACAGACCACTGTAGTTTGGGAATAGACAAGAGGCAGAAAATGTTGATATAGTGAGAATGCTTGCTGGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCTTCTCCAACATCCTCTCTATTGTCTGCTTCTTGTCAGAATTCCTTCATTGAGCACATTGTCCATTaGAAAAAGCACTCCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: SASPTSSLLSASCQNSFIEHIVH*KKHSIT Trigger: TGTGATGGAGTGCTTTTTCAAATGGACAATGTGCTC...AATGAAGGAATTCTGACAAGAAGCAGACAATAGAGAGGATGTTGGAGAAGCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCAGGTATACATCATCATCAGAACAGAACACATGTAAGCATGCCTATACCAAACATTTTCTGCCTCTaGTCTATTCCCAAACTACAG | + |
|
Preference number: 3 (lower is better) Translates to: PSGIHHHQNRTHVSMPIPNIFCL*SIPKLQ Trigger: CTGTAGTTTGGGAATAGACAAGAGGCAGAAAATGTT...TGGTATAGGCATGCTTACATGTGTTCTGTTCTGATGATGATGTATACCTGAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCAGGTATACATCATCATCAGAACAGAACACATGTAAGCATGCCTATACCATCTATTGTCTGCTTCTaGTCAGAATTCCTTCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: PSGIHHHQNRTHVSMPIPSIVCF*SEFLHF Trigger: GAAATGAAGGAATTCTGACAAGAAGCAGACAATAGA...TGGTATAGGCATGCTTACATGTGTTCTGTTCTGATGATGATGTATACCTGAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR GCA 90 bp | ACATCTGCCTCAGCTGTGGCACCCTCTTCATACCCACGGCTCAGTAGTCGGCAGGGGCATTCCTCCTACTaGCGGAGGAGGAAGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSASAVAPSSYPRLSSRQGHSSY*RRRKWR Trigger: CCTCCACTTCCTCCTCCGGCAGTAGGAGGAATGCCC...CTGCCGACTACTGAGCCGTGGGTATGAAGAGGGTGCCACAGCTGAGGCAGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCCTCAGCACCTAACGGCATTGGGGTGGGGCAGGATGTTCTTTCTGGGTTTCCTCCCGCTCCTCTaGGAGTCCTCCTCCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPQHLTALGWGRMFFLGFLPLL*ESSSTV Trigger: CACTGTGGAGGAGGACTCTCAGAGGAGCGGGAGGAA...ACCCAGAAAGAACATCCTGCCCCACCCCAATGCCGTTAGGTGCTGAGGACTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR CCA 90 bp | CTGTCAACAAGGAAGTGGGTGGGGTGGCCACATCTTGGGTGGCCTGTGGGCTGTCCAAGTCTCCAGGGTTaGGGAGACACAGTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTRKWVGWPHLGWPVGCPSLQG*GDTVLP Trigger: GGGAAGAACTGTGTCTCCCCAACCCTGGAGACTTGG...ACAGCCCACAGGCCACCCAAGATGTGGCCACCCCACCCACTTCCTTGTTGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCCTCAGCACCTAACGGCATTGGGGTGGGGCAGGATGTTCTTTCTGGGTGCGGCAGACAGCCAATaGGAGAGTGGAGCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPQHLTALGWGRMFFLGAADSQ*ESGARC Trigger: ACATCTGGCTCCACTCTCTCATTGGCTGTCTGCCGC...ACCCAGAAAGAACATCCTGCCCCACCCCAATGCCGTTAGGTGCTGAGGACTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR GCA 90 bp | CATACCAGATGTTTCCTTCCCGGCGTCTGGCCCTCTCTGAGTGGTGACATGTTCGGTGGGCAAGTGCAGTaGTGGGGAGGGTTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTRCFLPGVWPSLSGDMFGGQVQ*WGGLSS Trigger: TGAGGACAACCCTCCCCAGCACTGCACTTGCCCACC...GAACATGTCACCACTCAGAGAGGGCCAGACGCCGGGAAGGAAACATCTGGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CAA 72 bp | GTGGCCACATCTTGGGTGGCCTGTGGGCTGTTTCTATaGGCCAGCAGCAGGTGCTACCCAAGAGCAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VATSWVACGLFL*ASSRCYPRASP Trigger: AGGACTTGCTCTTGGGTAGCACCTGCTGCTGGCCAATAGAAACAGCCCACAGGCCACCCAAGATGTGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCCTCAGCACCTAACGGCATTGGGGTGGGGCAGGATGTTCTTTCTGGGTCAGCTCGGTTCCCTGTaGTCTTCATGGGGTACACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPQHLTALGWGRMFFLGQLGSL*SSWGTP Trigger: TGGTGTACCCCATGAAGATCACAGGGAACCGAGCTG...ACCCAGAAAGAACATCCTGCCCCACCCCAATGCCGTTAGGTGCTGAGGACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR CCA 90 bp | CTGTCAACAAGGAAGTGGGTGGGGTGGCCACATCTTGGGTGGCCTGTGGGCTGTCATGGGGTACACCATTaGATACAGGACGGCGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSTRKWVGWPHLGWPVGCHGVHH*IQDGVV Trigger: TACTACGCCGTCCTGTATCCAATGGTGTACCCCATG...ACAGCCCACAGGCCACCCAAGATGTGGCCACCCCACCCACTTCCTTGTTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CAA 72 bp | ATCTGTCAACAAGGAAGTGGGTGGGGTGGCCACATCTaGGGTGGCCTGTGGGCTGTTTCTATTGGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICQQGSGWGGHI*GGLWAVSIGQQ Trigger: CTGCTGGCCAATAGAAACAGCCCACAGGCCACCCAAGATGTGGCCACCCCACCCACTTCCTTGTTGACAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CAA 72 bp | GTGAGGCACACAGTGGGACCTAATACATGCCTGTTCTaGGCCCCCTCTTGTTCCTTCCACACAGGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRHTVGPNTCLF*APSCSFHTGRR Trigger: CCTCCTGCCTGTGTGGAAGGAACAAGAGGGGGCCAAGAACAGGCATGTATTAGGTCCCACTGTGTGCCTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGGCTCAAGCCAAGCCTCAGGAACCACAGGCACTGGTCACTCCAGGAACTGTCCTGTTGGAAATGCTaGAGAGCCTGGAGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRLKPSLRNHRHWSLQELSCWKC*RAWRSS Trigger: AGAGGACCTCCAGGCTCTTCAGCATTTCCAACAGGA...CAGTTCCTGGAGTGACCAGTGCCTGTGGTTCCTGAGGCTTGGCTTGAGCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR GCA 90 bp | CAATTAGCTGCCTCGTGGCAGATATGGCGAGGTCTTAGACTTCCTCTGCTCTGTACCACCGTGCCACAGTaGACCTTTCGGGCCTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: QLAASWQIWRGLRLPLLCTTVPQ*TFRALT Trigger: GGTCAAGGCCCGAAAGGTGCACTGTGGCACGGTGGT...ACAGAGCAGAGGAAGTCTAAGACCTCGCCATATCTGCCACGAGGCAGCTAATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR GCA 90 bp | CCACATCTCCATCTGCTTCTAACGTGTGCTTTCGAAGCCTCGTTCCATCCCAGGTCTTGGGTGGGCAAGTaGAGTGCTGGGGAGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHLHLLLTCAFEASFHPRSWVGK*SAGEGC Trigger: ACAACCCTCCCCAGCACTGCACTTGCCCACCCAAGA...CCTGGGATGGAACGAGGCTTCGAAAGCACACGTTAGAAGCAGATGGAGATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR GCA 90 bp | GGGGAATGGCATGGACACCTATCCCTCCTCTACATCTTCCATCAGGGCTTGGAATCACAAGAGTTCTGCTaGCTCGACGGCCCCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GEWHGHLSLLYIFHQGLESQEFC*LDGPQS Trigger: GCTTTGGGGGCCGTCGAGGCAGCAGAACTCTTGTGA...TTCCAAGCCCTGATGGAAGATGTAGAGGAGGGATAGGTGTCCATGCCATTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR CCA 90 bp | CCACATCTCCATCTGCTTCTAACGTGTGCTTTCGAAGCCTCGTTCCATCCCAGGGGGCAAGTGCAGTGCTaGGGAGGGTTGTCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PHLHLLLTCAFEASFHPRGQVQC*GGLSSE Trigger: TTCTGAGGACAACCCTCCCCAGCACTGCACTTGCCC...CCTGGGATGGAACGAGGCTTCGAAAGCACACGTTAGAAGCAGATGGAGATGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CAA 72 bp | ACTGCTGGACAGAGCAGTCCTCAGCACCTAACGGCATaGGGGTGGGGCAGGATGTTCTTTCTGGGTATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAGQSSPQHLTA*GWGRMFFLGIR Trigger: CCTTATACCCAGAAAGAACATCCTGCCCCACCCCAATGCCGTTAGGTGCTGAGGACTGCTCTGTCCAGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR TCA 90 bp | CAATTAGCTGCCTCGTGGCAGATATGGCGAGGTCTTAGACTTCCTCTGCTCTGTCGTGAGCATGCTGGCTaGGCTGATCAGCAGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLAASWQIWRGLRLPLLCREHAG*ADQQVE Trigger: CTCTACCTGCTGATCAGCTCAGCCAGCATGCTCACG...ACAGAGCAGAGGAAGTCTAAGACCTCGCCATATCTGCCACGAGGCAGCTAATTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR GCA 90 bp | ATAAAACCCAGCTGGCCCACTCTGCTAAGGATGACCTTTAACCTACCTGTGCATAGCCTGTGTCACCGGTaGTGCTGCTGTGTCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IKPSWPTLLRMTFNLPVHSLCHR*CCCVPG Trigger: CCCTGGGACACAGCAGCAGCACCGGTGACACAGGCT...ATGCACAGGTAGGTTAAAGGTCATCCTTAGCAGAGTGGGCCAGCTGGGTTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR CCA 90 bp | CAATTAGCTGCCTCGTGGCAGATATGGCGAGGTCTTAGACTTCCTCTGCTCTGTGAGCGCCGTGAGATGTaGGGACAGACCCAAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLAASWQIWRGLRLPLLCERREM*GQTQVC Trigger: ACAGACTTGGGTCTGTCCCCACATCTCACGGCGCTC...ACAGAGCAGAGGAAGTCTAAGACCTCGCCATATCTGCCACGAGGCAGCTAATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CAA 72 bp | AGCTATGTACACTACAGTGCTGGACCCAGTGCCTTCTaGGATGCAACAGGTCACAGGGCTGGCATCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SYVHYSAGPSAF*DATGHRAGIWN Trigger: GTTCCAGATGCCAGCCCTGTGACCTGTTGCATCCAAGAAGGCACTGGGTCCAGCACTGTAGTGTACATAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR TCA 90 bp | ACATCTGCCTCAGCTGTGGCACCCTCTTCATACCCACGGCTCAGTAGTCGGCAGTTTGCACTGGTTAGCTaGATAGACCACTCCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSASAVAPSSYPRLSSRQFALVS*IDHSLK Trigger: CTTCAAGGAGTGGTCTATTCAGCTAACCAGTGCAAA...CTGCCGACTACTGAGCCGTGGGTATGAAGAGGGTGCCACAGCTGAGGCAGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR GCA 90 bp | GCATTGGGGTGGGGCAGGATGTTCTTTCTGGGTATAAGGAAGGTCAATGTTGAACTGTGTCACCGGTGCTaGTGCTGTGTCCCAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ALGWGRMFFLGIRKVNVELCHRC*CCVPGT Trigger: AGTCCCTGGGACACAGCAGCAGCACCGGTGACACAG...TTCAACATTGACCTTCCTTATACCCAGAAAGAACATCCTGCCCCACCCCAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGGCTCAAGCCAAGCCTCAGGAACCACAGGCACTGGTCACTCCAGGAACTGACTTCAGCTTTCACATaGAGAAGAGAGTTCTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QRLKPSLRNHRHWSLQELTSAFT*RREFLA Trigger: CGCCAAGAACTCTCTTCTTCATGTGAAAGCTGAAGT...CAGTTCCTGGAGTGACCAGTGCCTGTGGTTCCTGAGGCTTGGCTTGAGCCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR GCA 90 bp | CATACCAGATGTTTCCTTCCCGGCGTCTGGCCCTCTCTGAGTGGTGACATGTTCGGTTGTCCTCAGAAGTaGCATCTTCCAACAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HTRCFLPGVWPSLSGDMFGCPQK*HLPTAS Trigger: TGATGCTGTTGGAAGATGGCACTTCTGAGGACAACC...GAACATGTCACCACTCAGAGAGGGCCAGACGCCGGGAAGGAAACATCTGGTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR TCA 90 bp | CAATTAGCTGCCTCGTGGCAGATATGGCGAGGTCTTAGACTTCCTCTGCTCTGTCCACACACATCCACTTaGACTCATCAAACTCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: QLAASWQIWRGLRLPLLCPHTST*THQTPP Trigger: CGGTGGAGTTTGATGAGTTCAAGTGGATGTGTGTGG...ACAGAGCAGAGGAAGTCTAAGACCTCGCCATATCTGCCACGAGGCAGCTAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR TCA 90 bp | GCTTCAAATCCTTTAAAAGGGAGGTCACATCACTTCTGGAATACTGGAGACTCCAGTCCTCCTCCACAGTaGCCACCGTGCCACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASNPLKGRSHHFWNTGDSSPPPQ*PPCHSA Trigger: TGCACTGTGGCACGGTGGTCACTGTGGAGGAGGACT...GGAGTCTCCAGTATTCCAGAAGTGATGTGACCTCCCTTTTAAAGGATTTGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CAA 72 bp | AGATCCATTCCTAGGCGTGCAGGCTTTCTACCACACTaGGCATGGTCTTTGGGAAGAACTGGTGCATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSIPRRAGFLPH*AWSLGRTGASV Trigger: CACAGATGCACCAGTTCTTCCCAAAGACCATGCCAAGTGTGGTAGAAAGCCTGCACGCCTAGGAATGGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR CCA 90 bp | TCAGCTTCTCCAACATCCTCTCTATTGTCTGCTTCTTGTCAGAATTCCTTCATTGCTCCTCCTCTTGGGTaGGCAAGTGCAGTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SASPTSSLLSASCQNSFIAPPLG*ASAVLG Trigger: CCCCAGCACTGCACTTGCCCACCCAAGAGGAGGAGC...AATGAAGGAATTCTGACAAGAAGCAGACAATAGAGAGGATGTTGGAGAAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CAA 72 bp | AACCTACCTGTGCATCACTCTCCTTGGGCTACAGGCTaGATCTTCTCTCAGCCTCATGACCAAGACATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLPVHHSPWATG*IFSQPHDQDIV Trigger: CACTATGTCTTGGTCATGAGGCTGAGAGAAGATCAAGCCTGTAGCCCAAGGAGAGTGATGCACAGGTAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGTTTCTGTTCCTACTAACCTCTTGCATTCCAGATCCTACTCAGCTTCTCCCCCAGAGTGCCTCTaGGGTAATGACAACCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPVSVPTNLLHSRSYSASPPECL*GNDNHV Trigger: TACATGGTTGTCATTACCTCAGAGGCACTCTGGGGG...AGAAGCTGAGTAGGATCTGGAATGCAAGAGGTTAGTAGGAACAGAAACAGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR GCA 90 bp | CATCTCTTAAATTGCAGATTCAGAAGCCATCAAAAGTCAGAGCTGGAATTACCTCCCTGGGACGGTCCGTaGTGTGAACAAGACCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLLNCRFRSHQKSELELPPWDGP*CEQDPW Trigger: CCAGGGGTCTTGTTCACAGCACGGACCGTCCCAGGG...AGGTAATTCCAGCTCTGACTTTTGATGGCTTCTGAATCTGCAATTTAAGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR GCA 90 bp | CATGATCCATTGAGGAATGTCTCTCTAATCTGCAAGGCTAAGGAGCACATTGTCGATTCACAAGAGTTCTaGTGCCTCGACGGCCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HDPLRNVSLICKAKEHIVDSQEF*CLDGPQ Trigger: TTGGGGGCCGTCGAGGCAGCAGAACTCTTGTGAATC...GACAATGTGCTCCTTAGCCTTGCAGATTAGAGAGACATTCCTCAATGGATCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR TCA 90 bp | GGAGGCTACTTGTTCCAACTCCCCACACCTTTCTTTTCTCCAAATGGCCTAGTGCCTCCCCAAATAAGTTaGTTTTGGCTTCAGCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGYLFQLPTPFFSPNGLVPPQIS*FWLQPQ Trigger: TTGAGGCTGAAGCCAAAATCAACTTATTTGGGGAGG...CACTAGGCCATTTGGAGAAAAGAAAGGTGTGGGGAGTTGGAACAAGTAGCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR GCA 90 bp | ACATGTGCTTTACAGAAGACAACTGAAGTCAGAGACTGGAGACAGTATTTTCAAGGTCCCCAAAGCACATaGCCAGGAGCTCCTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TCALQKTTEVRDWRQYFQGPQST*PGAPCA Trigger: TGCGCAAGGAGCTCCTGGGCATGTGCTTTGGGGACC...TTGAAAATACTGTCTCCAGTCTCTGACTTCAGTTGTCTTCTGTAAAGCACATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CAA 72 bp | CCACAACAATACTGCTGCCATCTTATGTCTAAGGTCTaGAACCTCCCATTTGGGTTGTCTGGCCAGGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PQQYCCHLMSKV*NLPFGLSGQGK Trigger: TTTTCCCTGGCCAGACAACCCAAATGGGAGGTTCAAGACCTTAGACATAAGATGGCAGCAGTATTGTTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGGTATACATCATCATCAGAACAGAACACATGTAAGCATGCCTATACCAGGAGGGCAGAGAAGTTaGACCAAACCACGCCGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSGIHHHQNRTHVSMPIPGGQRS*TKPRRK Trigger: TTTTCGGCGTGGTTTGGTGCAACTTCTCTGCCCTCC...TGGTATAGGCATGCTTACATGTGTTCTGTTCTGATGATGATGTATACCTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CAA 72 bp | ATTCAGAAGCCATCAAAAGTCAGAGCTGGAATTACCTaGGAGGCTACTTGTTCCAACTCCCCACACCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IQKPSKVRAGIT*EATCSNSPHLS Trigger: AGAAAGGTGTGGGGAGTTGGAACAAGTAGCCTCCAAGGTAATTCCAGCTCTGACTTTTGATGGCTTCTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR TCA 90 bp | TCAGCTTCTCCAACATCCTCTCTATTGTCTGCTTCTTGTCAGAATTCCTTCATTTGTAGCTGCAGCCTCTaGTTCACAAGAGTTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SASPTSSLLSASCQNSFICSCSL*FTRVLL Trigger: CAGCAGAACTCTTGTGAATCAGAGGCTGCAGCTACA...AATGAAGGAATTCTGACAAGAAGCAGACAATAGAGAGGATGTTGGAGAAGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CAA 72 bp | CCACCAGTCATGTTCAGTTTGTCCCCATCTCTTAAATaGCAGATTCAGAAGCCATCAAAAGTCAGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPVMFSLSPSLK*QIQKPSKVRAG Trigger: TCCAGCTCTGACTTTTGATGGCTTCTGAATCTGCAATTTAAGAGATGGGGACAAACTGAACATGACTGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CAA 72 bp | TCTCTAATCTGCAAGGCTAAGGAGCACATTGTCCATTaGAAAAAGCACTCCATCACAACAGACCAGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLICKAKEHIVH*KKHSITTDQQA Trigger: TGCTTGCTGGTCTGTTGTGATGGAGTGCTTTTTCAAATGGACAATGTGCTCCTTAGCCTTGCAGATTAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| 3UTR CAA 72 bp | TCCAGATCCTACTCAGCTTCTCCAACATCCTCTCTATaGTCTGCTTCTTGTCAGAATTCCTTCATTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SRSYSASPTSSL*SASCQNSFISI Trigger: AATGGAAATGAAGGAATTCTGACAAGAAGCAGACAATAGAGAGGATGTTGGAGAAGCTGAGTAGGATCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR GCA 90 bp | ACATGTGCTTTACAGAAGACAACTGAAGTCAGAGACTGGAGACAGTATTTTCAATTTAGCCAAGCTGGCTaGGTAACTGTCCAAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: TCALQKTTEVRDWRQYFQFSQAG*VTVQGF Trigger: AAATCCTTGGACAGTTACGCAGCCAGCTTGGCTAAA...TTGAAAATACTGTCTCCAGTCTCTGACTTCAGTTGTCTTCTGTAAAGCACATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS GCA 90 bp | GCCTGTGTCACCGGTGCTGCTGCTGTGTCCCAGGGACTGTCCGCCTaGCATGAGCGCCGTGAGATGTGGGGACAGACCCAAGTCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ACVTGAAAVSQGLSA*HERREMWGQTQVCD Trigger: ATCACAGACTTGGGTCTGTCCCCACATCTCACGGCGCTCATGGCAGGCGGACAGTCCCTGGGACACAGCAGCAGCACCGGTGACACAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
||
| CDS-3UTR CAA 90 bp | GAATACACAGAGAAGACAGGCGCCGCAAGGAATGCAGGACCCGTCCTCCCTGCCCAGTGCTGGGGAGGGTaGTCCTCAGAAGTGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: EYTEKTGAARNAGPVLPAQCWGG*SSEVPS Trigger: AGATGGCACTTCTGAGGACAACCCTCCCCAGCACTG...GGCAGGGAGGACGGGTCCTGCATTCCTTGCGGCGCCTGTCTTCTCTGTGTATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGGCTCAAGCCAAGCCTCAGGAACCACAGGCACTGGTCACTCCAGGAACTGACGGAGCTCCTCCTCTaGGGTGGGCAAGTGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QRLKPSLRNHRHWSLQELTELLL*GGQVQC Trigger: GCACTGCACTTGCCCACCCAAGAGGAGGAGCTCCGT...CAGTTCCTGGAGTGACCAGTGCCTGTGGTTCCTGAGGCTTGGCTTGAGCCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
||
| CDS GCA 90 bp | CAGTTCCTTCCTGTAGCTGAGGGAGGAGTTGAGGCTCATGGTCAGTaGCCCTCGGGATGCGGTGAGCAGAGCATGCTGGACGAAGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QFLPVAEGGVEAHGQ*PSGCGEQSMLDEVH Trigger: ATGGACTTCGTCCAGCATGCTCTGCTCACCGCATCCCGAGGGGCACTGACCATGAGCCTCAACTCCTCCCTCAGCTACAGGAAGGAACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178700.8 |
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| CDS TCA 90 bp | TGGTGTAGCCGGGTTCCTGGTGCCACGCGGCCACACACATCCACTTaGACTCATCAAACTCCACCGATGACCAACCAAATAGGGGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: WCSRVPGATRPHTST*THQTPPMTNQIGAA Trigger: TGCCGCCCCTATTTGGTTGGTCATCGGTGGAGTTTGATGAGTTCAAGTGGATGTGTGTGGCCGCGTGGCACCAGGAACCCGGCTACACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS TCA 90 bp | CCGGAGGAGGAAGTGGAGGTACTAGAATTCTTCCTCCCGCTCCTCTaGGAGTCCTCCTCCACAGTGACCACCGTGCCACAGTGCACCTTT | + |
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Preference number: 5 (lower is better) Translates to: PEEEVEVLEFFLPLL*ESSSTVTTVPQCTF Trigger: AAAGGTGCACTGTGGCACGGTGGTCACTGTGGAGGAGGACTCTCAGAGGAGCGGGAGGAAGAATTCTAGTACCTCCACTTCCTCCTCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS CCA 90 bp | CTGTTCCACTTCGTCCTCAAATGTCACGGAGCTCCTCCTCTTGGGTaGGCAAGTGCAGTGCTGGGGAGGGTTGTCCTCAGAAGTGCCATC | + |
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Preference number: 5 (lower is better) Translates to: LFHFVLKCHGAPPLG*ASAVLGRVVLRSAI Trigger: GATGGCACTTCTGAGGACAACCCTCCCCAGCACTGCACTTGCCCACCCAAGAGGAGGAGCTCCGTGACATTTGAGGACGAAGTGGAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS TCA 90 bp | CATCTTCCAACAGCATCACATCCGTCCCTGAATCCTGAGAGTAGCTaGAGCCTGTGTCACCGGTGCTGCTGCTGTGTCCCAGGGACTGTC | + |
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Preference number: 5 (lower is better) Translates to: HLPTASHPSLNPESS*SLCHRCCCCVPGTV Trigger: GACAGTCCCTGGGACACAGCAGCAGCACCGGTGACACAGGCTTCAGCTACTCTCAGGATTCAGGGACGGATGTGATGCTGTTGGAAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS GCA 90 bp | GATGGCGATGAACTCAGAGACGGCACCCCCTTCACCACCCTCTGTTaGAGTGAGGTTGCTCAGTTCCTTCCTGTAGCTGAGGGAGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: DGDELRDGTPFTTLC*SEVAQFLPVAEGGV Trigger: AACTCCTCCCTCAGCTACAGGAAGGAACTGAGCAACCTCACTGCAACAGAGGGTGGTGAAGGGGGTGCCGTCTCTGAGTTCATCGCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS GCA 90 bp | TCCTCAAATGTCACGGAGCTCCTCCTCTTGGGTGGGCAAGTGCAGTaGTGGGGAGGGTTGTCCTCAGAAGTGCCATCTTCCAACAGCATC | + |
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Preference number: 5 (lower is better) Translates to: SSNVTELLLLGGQVQ*WGGLSSEVPSSNSI Trigger: GATGCTGTTGGAAGATGGCACTTCTGAGGACAACCCTCCCCAGCACTGCACTTGCCCACCCAAGAGGAGGAGCTCCGTGACATTTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS GCA 90 bp | CTTCGTCCTCAAATGTCACGGAGCTCCTCCTCTTGGGTGGGCAAGTaGAGTGCTGGGGAGGGTTGTCCTCAGAAGTGCCATCTTCCAACA | + |
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Preference number: 5 (lower is better) Translates to: LRPQMSRSSSSWVGK*SAGEGCPQKCHLPT Trigger: TGTTGGAAGATGGCACTTCTGAGGACAACCCTCCCCAGCACTGCACTTGCCCACCCAAGAGGAGGAGCTCCGTGACATTTGAGGACGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS TCA 90 bp | CAAACTCCACCGATGACCAACCAAATAGGGGCGGCAGACAGCCAATaGGAGAGTGGAGCCAGATGTAGACGAGAGCCATCACAGCTCGGT | + |
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Preference number: 5 (lower is better) Translates to: QTPPMTNQIGAADSQ*ESGARCRREPSQLG Trigger: ACCGAGCTGTGATGGCTCTCGTCTACATCTGGCTCCACTCTCTCATTGGCTGTCTGCCGCCCCTATTTGGTTGGTCATCGGTGGAGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS TCA 90 bp | GCAGCTAAGACATTGCCTTCTTTGATGCTCTGTAGCTGCAGCCTCTaGTTCACAAGAGTTCTGCTGCCTCGACGGCCCCCAAAGCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: AAKTLPSLMLCSCSL*FTRVLLPRRPPKPA Trigger: GGCTGGCTTTGGGGGCCGTCGAGGCAGCAGAACTCTTGTGAATCAGAGGCTGCAGCTACAGAGCATCAAAGAAGGCAATGTCTTAGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS GCA 90 bp | ATTCCCGGTAATAACGGTCCCCAAAGCACATGCCCAGGAGCTCCTTaGGCACAGTCTTGTTCCAGAGTCCGTAGATCAGAGGGTGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: IPGNNGPQSTCPGAP*AQSCSRVRRSEGGR Trigger: TCTGCCACCCTCTGATCTACGGACTCTGGAACAAGACTGTGCGCAAGGAGCTCCTGGGCATGTGCTTTGGGGACCGTTATTACCGGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS CCA 90 bp | TCAAATGTCACGGAGCTCCTCCTCTTGGGTGGGCAAGTGCAGTGCTaGGGAGGGTTGTCCTCAGAAGTGCCATCTTCCAACAGCATCACA | + |
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Preference number: 5 (lower is better) Translates to: SNVTELLLLGGQVQC*GGLSSEVPSSNSIT Trigger: TGTGATGCTGTTGGAAGATGGCACTTCTGAGGACAACCCTCCCCAGCACTGCACTTGCCCACCCAAGAGGAGGAGCTCCGTGACATTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS TCA 90 bp | AGTGGAGCCAGATGTAGACGAGAGCCATCACAGCTCGGTTCCCTGTaGTCTTCATGGGGTACACCATTGGATACAGGACGGCGTAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: SGARCRREPSQLGSL*SSWGTPLDTGRRSS Trigger: GCTACTACGCCGTCCTGTATCCAATGGTGTACCCCATGAAGATCACAGGGAACCGAGCTGTGATGGCTCTCGTCTACATCTGGCTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS TCA 90 bp | GTTGTCCTCAGAAGTGCCATCTTCCAACAGCATCACATCCGTCCCTaGATCCTGAGAGTAGCTGAAGCCTGTGTCACCGGTGCTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VVLRSAIFQQHHIRP*ILRVAEACVTGAAA Trigger: AGCAGCAGCACCGGTGACACAGGCTTCAGCTACTCTCAGGATTCAGGGACGGATGTGATGCTGTTGGAAGATGGCACTTCTGAGGACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS CCA 90 bp | AGCCATCACAGCTCGGTTCCCTGTGATCTTCATGGGGTACACCATTaGATACAGGACGGCGTAGTAGCGATCGATGGCAATGACCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SHHSSVPCDLHGVHH*IQDGVVAIDGNDPK Trigger: CTTGGGGTCATTGCCATCGATCGCTACTACGCCGTCCTGTATCCAATGGTGTACCCCATGAAGATCACAGGGAACCGAGCTGTGATGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS-3UTR CAA 90 bp | CCACATCTCCATCTGCTTCTAACGTGTGCTTTCGAAGCCTCGTTCCATCCCAGGACCGACAACAGGAAGTaGGACAAGGTCAGGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: PHLHLLLTCAFEASFHPRTDNRK*DKVRLK Trigger: CTTCAGCCTGACCTTGTCCAACTTCCTGTTGTCGGT...CCTGGGATGGAACGAGGCTTCGAAAGCACACGTTAGAAGCAGATGGAGATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| CDS-3UTR CAA 90 bp | AGCAGTCCTCAGCACCTAACGGCATTGGGGTGGGGCAGGATGTTCTTTCTGGGTTCTGCAGCTAAGACATaGCCTTCTTTGATGCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SSPQHLTALGWGRMFFLGSAAKT*PSLMLC Trigger: ACAGAGCATCAAAGAAGGCAATGTCTTAGCTGCAGA...ACCCAGAAAGAACATCCTGCCCCACCCCAATGCCGTTAGGTGCTGAGGACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| CDS-3UTR CAA 90 bp | CCTTCAGGTATACATCATCATCAGAACAGAACACATGTAAGCATGCCTATACCATGCACCTTTCGGGCCTaGACCCTGGCCACCCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: PSGIHHHQNRTHVSMPIPCTFRA*TLATRK Trigger: CTTCCGGGTGGCCAGGGTCAAGGCCCGAAAGGTGCA...TGGTATAGGCATGCTTACATGTGTTCTGTTCTGATGATGATGTATACCTGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| CDS-3UTR CAA 90 bp | CATGATCCATTGAGGAATGTCTCTCTAATCTGCAAGGCTAAGGAGCACATTGTCAGGAGGGCAGAGAAGTaGCACCAAACCACGCCGAAA | + |
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Preference number: 5 (lower is better) Translates to: HDPLRNVSLICKAKEHIVRRAEK*HQTTPK Trigger: TTTCGGCGTGGTTTGGTGCAACTTCTCTGCCCTCCT...GACAATGTGCTCCTTAGCCTTGCAGATTAGAGAGACATTCCTCAATGGATCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| CDS-3UTR CAA 90 bp | ACATGTGCTTTACAGAAGACAACTGAAGTCAGAGACTGGAGACAGTATTTTCAAATGCCCAGGAGCTCCTaGCGCACAGTCTTGTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: TCALQKTTEVRDWRQYFQMPRSS*RTVLFQ Trigger: CTGGAACAAGACTGTGCGCAAGGAGCTCCTGGGCAT...TTGAAAATACTGTCTCCAGTCTCTGACTTCAGTTGTCTTCTGTAAAGCACATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| CDS-3UTR CAA 90 bp | CCTTCAGGTATACATCATCATCAGAACAGAACACATGTAAGCATGCCTATACCATCATGGGGTACACCATaGGATACAGGACGGCGTAGT | + |
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Preference number: 5 (lower is better) Translates to: PSGIHHHQNRTHVSMPIPSWGTP*DTGRRS Trigger: ACTACGCCGTCCTGTATCCAATGGTGTACCCCATGA...TGGTATAGGCATGCTTACATGTGTTCTGTTCTGATGATGATGTATACCTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| CDS-3UTR CAA 90 bp | CATCTCTTAAATTGCAGATTCAGAAGCCATCAAAAGTCAGAGCTGGAATTACCTTTCTTGGCGGCCTCTTaGATCTGTTCCACTTCGTCC | + |
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Preference number: 5 (lower is better) Translates to: HLLNCRFRSHQKSELELPFLAAS*ICSTSS Trigger: GGACGAAGTGGAACAGATCAAAGAGGCCGCCAAGAA...AGGTAATTCCAGCTCTGACTTTTGATGGCTTCTGAATCTGCAATTTAAGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| CDS-3UTR CAA 90 bp | ACATGTGCTTTACAGAAGACAACTGAAGTCAGAGACTGGAGACAGTATTTTCAAAAGTCTGTGATCCTGTaGGAAATGCTGAAGAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: TCALQKTTEVRDWRQYFQKSVIL*EMLKSL Trigger: CAGGCTCTTCAGCATTTCCAACAGGATCACAGACTT...TTGAAAATACTGTCTCCAGTCTCTGACTTCAGTTGTCTTCTGTAAAGCACATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111450.3 |
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| CDS GCA 72 bp | TCTGTAGCTGCAGCCTCTGATTCACAAGAGTTCTGCTaGCTCGACGGCCCCCAAAGCCAGCCCCTGGGACGG | + |
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Preference number: 6 (lower is better) Translates to: SVAAASDSQEFC*LDGPQSQPLGR Trigger: CCGTCCCAGGGGCTGGCTTTGGGGGCCGTCGAGGCAGCAGAACTCTTGTGAATCAGAGGCTGCAGCTACAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS GCA 72 bp | GTCACGGAGCTCCTCCTCTTGGGTGGGCAAGTGCAGTaGTGGGGAGGGTTGTCCTCAGAAGTGCCATCTTCC | + |
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Preference number: 6 (lower is better) Translates to: VTELLLLGGQVQ*WGGLSSEVPSS Trigger: GGAAGATGGCACTTCTGAGGACAACCCTCCCCAGCACTGCACTTGCCCACCCAAGAGGAGGAGCTCCGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS GCA 72 bp | TGCTCTGTAGCTGCAGCCTCTGATTCACAAGAGTTCTaGTGCCTCGACGGCCCCCAAAGCCAGCCCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: CSVAAASDSQEF*CLDGPQSQPLG Trigger: TCCCAGGGGCTGGCTTTGGGGGCCGTCGAGGCAGCAGAACTCTTGTGAATCAGAGGCTGCAGCTACAGAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS CCA 72 bp | ACGGAGCTCCTCCTCTTGGGTGGGCAAGTGCAGTGCTaGGGAGGGTTGTCCTCAGAAGTGCCATCTTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: TELLLLGGQVQC*GGLSSEVPSSN Trigger: GTTGGAAGATGGCACTTCTGAGGACAACCCTCCCCAGCACTGCACTTGCCCACCCAAGAGGAGGAGCTCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS CAA 90 bp | ACGGAGCTCCTCCTCTTGGGTGGGCAAGTGCAGTGCTGGGGAGGGTaGTCCTCAGAAGTGCCATCTTCCAACAGCATCACATCCGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: TELLLLGGQVQCWGG*SSEVPSSNSITSVP Trigger: AGGGACGGATGTGATGCTGTTGGAAGATGGCACTTCTGAGGACAACCCTCCCCAGCACTGCACTTGCCCACCCAAGAGGAGGAGCTCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS GCA 72 bp | CAAATGTCACGGAGCTCCTCCTCTTGGGTGGGCAAGTaGAGTGCTGGGGAGGGTTGTCCTCAGAAGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: QMSRSSSSWVGK*SAGEGCPQKCH Trigger: ATGGCACTTCTGAGGACAACCCTCCCCAGCACTGCACTTGCCCACCCAAGAGGAGGAGCTCCGTGACATTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS TCA 72 bp | GAAGTGGAGGTACTAGAATTCTTCCTCCCGCTCCTCTaGGAGTCCTCCTCCACAGTGACCACCGTGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: EVEVLEFFLPLL*ESSSTVTTVPQ Trigger: CTGTGGCACGGTGGTCACTGTGGAGGAGGACTCTCAGAGGAGCGGGAGGAAGAATTCTAGTACCTCCACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS TCA 72 bp | ACAGCATCACATCCGTCCCTGAATCCTGAGAGTAGCTaGAGCCTGTGTCACCGGTGCTGCTGCTGTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TASHPSLNPESS*SLCHRCCCCVP Trigger: TGGGACACAGCAGCAGCACCGGTGACACAGGCTTCAGCTACTCTCAGGATTCAGGGACGGATGTGATGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS GCA 72 bp | GAACTCAGAGACGGCACCCCCTTCACCACCCTCTGTTaGAGTGAGGTTGCTCAGTTCCTTCCTGTAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ELRDGTPFTTLC*SEVAQFLPVAE Trigger: CTCAGCTACAGGAAGGAACTGAGCAACCTCACTGCAACAGAGGGTGGTGAAGGGGGTGCCGTCTCTGAGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS TCA 72 bp | CCGATGACCAACCAAATAGGGGCGGCAGACAGCCAATaGGAGAGTGGAGCCAGATGTAGACGAGAGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: PMTNQIGAADSQ*ESGARCRREPS Trigger: TGATGGCTCTCGTCTACATCTGGCTCCACTCTCTCATTGGCTGTCTGCCGCCCCTATTTGGTTGGTCATCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS GCA 72 bp | GGCAAGTGCAGTGCTGGGGAGGGTTGTCCTCAGAAGTaGCATCTTCCAACAGCATCACATCCGTCCCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: GKCSAGEGCPQK*HLPTASHPSLN Trigger: ATTCAGGGACGGATGTGATGCTGTTGGAAGATGGCACTTCTGAGGACAACCCTCCCCAGCACTGCACTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS TCA 72 bp | CGGGTTCCTGGTGCCACGCGGCCACACACATCCACTTaGACTCATCAAACTCCACCGATGACCAACCAAATA | + |
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Preference number: 6 (lower is better) Translates to: RVPGATRPHTST*THQTPPMTNQI Trigger: TATTTGGTTGGTCATCGGTGGAGTTTGATGAGTTCAAGTGGATGTGTGTGGCCGCGTGGCACCAGGAACCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS TCA 72 bp | ACATTGCCTTCTTTGATGCTCTGTAGCTGCAGCCTCTaGTTCACAAGAGTTCTGCTGCCTCGACGGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: TLPSLMLCSCSL*FTRVLLPRRPP Trigger: TGGGGGCCGTCGAGGCAGCAGAACTCTTGTGAATCAGAGGCTGCAGCTACAGAGCATCAAAGAAGGCAATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS GCA 72 bp | AATAACGGTCCCCAAAGCACATGCCCAGGAGCTCCTTaGGCACAGTCTTGTTCCAGAGTCCGTAGATCAGAG | + |
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Preference number: 6 (lower is better) Translates to: NNGPQSTCPGAP*AQSCSRVRRSE Trigger: CTCTGATCTACGGACTCTGGAACAAGACTGTGCGCAAGGAGCTCCTGGGCATGTGCTTTGGGGACCGTTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS TCA 72 bp | AGATGTAGACGAGAGCCATCACAGCTCGGTTCCCTGTaGTCTTCATGGGGTACACCATTGGATACAGGACGG | + |
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Preference number: 6 (lower is better) Translates to: RCRREPSQLGSL*SSWGTPLDTGR Trigger: CCGTCCTGTATCCAATGGTGTACCCCATGAAGATCACAGGGAACCGAGCTGTGATGGCTCTCGTCTACATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS CCA 72 bp | AGCTCGGTTCCCTGTGATCTTCATGGGGTACACCATTaGATACAGGACGGCGTAGTAGCGATCGATGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: SSVPCDLHGVHH*IQDGVVAIDGN Trigger: ATTGCCATCGATCGCTACTACGCCGTCCTGTATCCAATGGTGTACCCCATGAAGATCACAGGGAACCGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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| CDS TCA 72 bp | CACCAGGATGGTGATGAGGGCTTTGCACTGGTTAGCTaGATAGACCACTCCTTGAAGGGCATTCCTCCTACT | + |
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Preference number: 6 (lower is better) Translates to: HQDGDEGFALVS*IDHSLKGIPPT Trigger: AGTAGGAGGAATGCCCTTCAAGGAGTGGTCTATTCAGCTAACCAGTGCAAAGCCCTCATCACCATCCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111450.3 ENSMUST00000178700.8 |
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