Pregenerated sensors for GPR160 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037661Ensembl transcript IDs: ENSMUST00000046748.13, ENSMUST00000108258.8, ENSMUST00000108259.8, ENSMUST00000108261.8, ENSMUST00000166278.7
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AGCAGGCATAAACATTCTGCTGTGCTAATGTATCCTCAGCACTACTaGGCATCTGCCCCACGGACGCTGTGCTGGAAAGGGGGACTCGAG | + |
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Preference number: 2 (lower is better) Translates to: SRHKHSAVLMYPQHY*ASAPRTLCWKGGLE Trigger: CTCGAGTCCCCCTTTCCAGCACAGCGTCCGTGGGGCAGATGCCAAGTAGTGCTGAGGATACATTAGCACAGCAGAATGTTTATGCCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| 3UTR CAA 90 bp | ATGTGTTTACTTTGCATTTGGATTAATACCAAATATTCCACAATGTaGTCGAGCAGGCATAAACATTCTGCTGTGCTAATGTATCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: MCLLCIWINTKYSTM*SSRHKHSAVLMYPQ Trigger: CTGAGGATACATTAGCACAGCAGAATGTTTATGCCTGCTCGACAACATTGTGGAATATTTGGTATTAATCCAAATGCAAAGTAAACACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| 3UTR GCA 72 bp | CCTCAGCACTACTTGGCATCTGCCCCACGGACGCTGTaGTGGAAAGGGGGACTCGAGCTTCAGTTCCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: PQHYLASAPRTL*WKGGLELQFLS Trigger: GGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCGTCCGTGGGGCAGATGCCAAGTAGTGCTGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| 3UTR CCA 72 bp | CAGCACTACTTGGCATCTGCCCCACGGACGCTGTGCTaGAAAGGGGGACTCGAGCTTCAGTTCCTGTCCCGA | + |
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Preference number: 3 (lower is better) Translates to: QHYLASAPRTLC*KGGLELQFLSR Trigger: TCGGGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCGTCCGTGGGGCAGATGCCAAGTAGTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| 3UTR-3UTR CAA 90 bp | GGCATCTGCCCCACGGACGCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTCTTGTGAGACTGATCTaGGTGCTTCTGAAGTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: GICPTDAVLERGTRASVPLVRLI*VLLKFL Trigger: GAGGAACTTCAGAAGCACCAAGATCAGTCTCACAAG...AGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCGTCCGTGGGGCAGATGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| 3UTR GCA 72 bp | TGCTGTGCTAATGTATCCTCAGCACTACTTGGCATCTaGCCCACGGACGCTGTGCTGGAAAGGGGGACTCGA | + |
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Preference number: 3 (lower is better) Translates to: CCANVSSALLGI*PTDAVLERGTR Trigger: TCGAGTCCCCCTTTCCAGCACAGCGTCCGTGGGGCAGATGCCAAGTAGTGCTGAGGATACATTAGCACAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| 3UTR-3UTR CAA 90 bp | CTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGTCCTTGTGAGACTGATCTaGGTGCTTCTGAAGTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LCWKGGLELQFLSRATSVLVRLI*VLLKFL Trigger: GAGGAACTTCAGAAGCACCAAGATCAGTCTCACAAG...GACAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| 3UTR-3UTR CAA 90 bp | CATTCTGCTGTGCTAATGTATCCTCAGCACTACTTGGCATCTGCCCCACGGACGCTTGTGAGACTGATCTaGGTGCTTCTGAAGTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: HSAVLMYPQHYLASAPRTLVRLI*VLLKFL Trigger: GAGGAACTTCAGAAGCACCAAGATCAGTCTCACAAG...CGTCCGTGGGGCAGATGCCAAGTAGTGCTGAGGATACATTAGCACAGCAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | CGCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGGAGCCTGGGCAAGAGTaGTTCTCTGCAGCTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RCAGKGDSSFSSCPEPPLEPGQE*FSAAQG Trigger: GCCCTGAGCTGCAGAGAAGCACTCTTGCCCAGGCTC...CAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | GCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGTGAGCCTGGGCAAGAGTaGTTCTCTGCAGCTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVLERGTRASVPVPSHLCEPGQE*FSAAQG Trigger: GCCCTGAGCTGCAGAGAAGCACTCTTGCCCAGGCTC...ACAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR TCA 90 bp | CGCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGGAGAGGATGAGGACCTaGAGTGCTACAAAGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: RCAGKGDSSFSSCPEPPLERMRT*SATKGN Trigger: GTTTCCCTTTGTAGCACTTCAGGTCCTCATCCTCTC...CAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | CGGACGCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCGATGAGGACCTGAAGTaGTACAAAGGGAAACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RTLCWKGGLELQFLSRATDEDLK*YKGKPG Trigger: ACCTGGTTTCCCTTTGTAGCACTTCAGGTCCTCATC...GGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCGTCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | CGGACGCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCATGGGCCTCTCCACTTaGTTAAGTCTATGGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLCWKGGLELQFLSRATMGLST*LSLWTG Trigger: TCCAGTCCATAGACTTAAGCAAGTGGAGAGGCCCAT...GGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCGTCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | CCTGTCCCGAGCCACCTCTGTCCTTGTGAGACTGATCTTGGTGCTTCTGAAGTTGAGCCTGGGCAAGAGTaGTTCTCTGCAGCTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PVPSHLCPCETDLGASEVEPGQE*FSAAQG Trigger: GCCCTGAGCTGCAGAGAAGCACTCTTGCCCAGGCTC...AACTTCAGAAGCACCAAGATCAGTCTCACAAGGACAGAGGTGGCTCGGGACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | CGCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGGATGAGGACCTGAAGTaGTACAAAGGGAAACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RCAGKGDSSFSSCPEPPLDEDLK*YKGKPG Trigger: ACCTGGTTTCCCTTTGTAGCACTTCAGGTCCTCATC...CAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | GGCATCTGCCCCACGGACGCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTATGGGCCTCTCCACTTaGTTAAGTCTATGGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: GICPTDAVLERGTRASVPMGLST*LSLWTG Trigger: TCCAGTCCATAGACTTAAGCAAGTGGAGAGGCCCAT...AGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCGTCCGTGGGGCAGATGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR TCA 90 bp | GCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGTGTCTATACAAGCCAGTaGGCAGACTGGGTAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AVLERGTRASVPVPSHLCVYTSQ*ADWVMQ Trigger: TTGCATTACCCAGTCTGCTCACTGGCTTGTATAGAC...ACAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | CGGACGCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCAAGGCAACAACTTCCTaGCATGAAATCAGAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTLCWKGGLELQFLSRATKATTS*HEIRKA Trigger: GGCTTTTCTGATTTCATGGCAGGAAGTTGTTGCCTT...GGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCGTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | GGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGTCCTTGTGAGACTGGATGAGGACCTGAAGTaGTACAAAGGGAAACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GGLELQFLSRATSVLVRLDEDLK*YKGKPG Trigger: ACCTGGTTTCCCTTTGTAGCACTTCAGGTCCTCATC...CAGTCTCACAAGGACAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | ATCCTCAGCACTACTTGGCATCTGCCCCACGGACGCTGTGCTGGAAAGGGGGACATGGGCCTCTCCACTTaGTTAAGTCTATGGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: ILSTTWHLPHGRCAGKGDMGLST*LSLWTG Trigger: TCCAGTCCATAGACTTAAGCAAGTGGAGAGGCCCAT...GTCCCCCTTTCCAGCACAGCGTCCGTGGGGCAGATGCCAAGTAGTGCTGAGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| 3UTR CAA 72 bp | CTGTCCCGAGCCACCTCTGTCCTTGTGAGACTGATCTaGGTGCTTCTGAAGTTCCTCCCAGCACAGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LSRATSVLVRLI*VLLKFLPAQQH Trigger: ATGCTGCTGTGCTGGGAGGAACTTCAGAAGCACCAAGATCAGTCTCACAAGGACAGAGGTGGCTCGGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | GGCATCTGCCCCACGGACGCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTAAGGCAACAACTTCCTaGCATGAAATCAGAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GICPTDAVLERGTRASVPKATTS*HEIRKA Trigger: GGCTTTTCTGATTTCATGGCAGGAAGTTGTTGCCTT...AGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCGTCCGTGGGGCAGATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CCA 90 bp | CTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGTCCTTGTGAGACTGATCTTGGTAACCGCAGTGGAGTaGGAAAGGAAAGTAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LELQFLSRATSVLVRLILVTAVE*ERKVEG Trigger: GCCCTCTACTTTCCTTTCCCACTCCACTGCGGTTAC...CAAGATCAGTCTCACAAGGACAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | ATCCTCAGCACTACTTGGCATCTGCCCCACGGACGCTGTGCTGGAAAGGGGGACAAGGCAACAACTTCCTaGCATGAAATCAGAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: ILSTTWHLPHGRCAGKGDKATTS*HEIRKA Trigger: GGCTTTTCTGATTTCATGGCAGGAAGTTGTTGCCTT...GTCCCCCTTTCCAGCACAGCGTCCGTGGGGCAGATGCCAAGTAGTGCTGAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CCA 90 bp | CGCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGACTTGCTTAAGTCTATaGACTGGAACAAAGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: RCAGKGDSSFSSCPEPPLTCLSL*TGTKQH Trigger: ATGCTGCTTTGTTCCAGTCCATAGACTTAAGCAAGT...CAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR TCA 90 bp | CATTCTGCTGTGCTAATGTATCCTCAGCACTACTTGGCATCTGCCCCACGGACGGAGAGGATGAGGACCTaGAGTGCTACAAAGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: HSAVLMYPQHYLASAPRTERMRT*SATKGN Trigger: GTTTCCCTTTGTAGCACTTCAGGTCCTCATCCTCTC...CGTCCGTGGGGCAGATGCCAAGTAGTGCTGAGGATACATTAGCACAGCAGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | TCGAGCAGGCATAAACATTCTGCTGTGCTAATGTATCCTCAGCACTACTTGGCAGAGCCTGGGCAAGAGTaGTTCTCTGCAGCTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SSRHKHSAVLMYPQHYLAEPGQE*FSAAQG Trigger: GCCCTGAGCTGCAGAGAAGCACTCTTGCCCAGGCTC...TGCCAAGTAGTGCTGAGGATACATTAGCACAGCAGAATGTTTATGCCTGCTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | CTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGTCCTTGTGAGACTGATCTTGGATGAGGACCTGAAGTaGTACAAAGGGAAACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LELQFLSRATSVLVRLILDEDLK*YKGKPG Trigger: ACCTGGTTTCCCTTTGTAGCACTTCAGGTCCTCATC...CAAGATCAGTCTCACAAGGACAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CCA 90 bp | GGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGTCCTTGTGAGACTGGTGAGCAGACAGATGTaGTATCTGGTAAACCTAATA | + |
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Preference number: 4 (lower is better) Translates to: GGLELQFLSRATSVLVRLVSRQM*YLVNLI Trigger: TATTAGGTTTACCAGATACCACATCTGTCTGCTCAC...CAGTCTCACAAGGACAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CCA 90 bp | ATCCTCAGCACTACTTGGCATCTGCCCCACGGACGCTGTGCTGGAAAGGGGGACACTTGCTTAAGTCTATaGACTGGAACAAAGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: ILSTTWHLPHGRCAGKGDTCLSL*TGTKQH Trigger: ATGCTGCTTTGTTCCAGTCCATAGACTTAAGCAAGT...GTCCCCCTTTCCAGCACAGCGTCCGTGGGGCAGATGCCAAGTAGTGCTGAGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CCA 90 bp | GGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGTCCTTGTGAGACTGACTTGCTTAAGTCTATaGACTGGAACAAAGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: GGLELQFLSRATSVLVRLTCLSL*TGTKQH Trigger: ATGCTGCTTTGTTCCAGTCCATAGACTTAAGCAAGT...CAGTCTCACAAGGACAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR TCA 90 bp | CATTCTGCTGTGCTAATGTATCCTCAGCACTACTTGGCATCTGCCCCACGGACGGTCTATACAAGCCAGTaGGCAGACTGGGTAATGCAA | + |
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Preference number: 4 (lower is better) Translates to: HSAVLMYPQHYLASAPRTVYTSQ*ADWVMQ Trigger: TTGCATTACCCAGTCTGCTCACTGGCTTGTATAGAC...CGTCCGTGGGGCAGATGCCAAGTAGTGCTGAGGATACATTAGCACAGCAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | CGAGCCACCTCTGTCCTTGTGAGACTGATCTTGGTGCTTCTGAAGTTCCTCCCAGATGAGGACCTGAAGTaGTACAAAGGGAAACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RATSVLVRLILVLLKFLPDEDLK*YKGKPG Trigger: ACCTGGTTTCCCTTTGTAGCACTTCAGGTCCTCATC...TGGGAGGAACTTCAGAAGCACCAAGATCAGTCTCACAAGGACAGAGGTGGCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR TCA 90 bp | GTCCTTGTGAGACTGATCTTGGTGCTTCTGAAGTTCCTCCCAGCACAGCAGCATGTCTATACAAGCCAGTaGGCAGACTGGGTAATGCAA | + |
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Preference number: 4 (lower is better) Translates to: VLVRLILVLLKFLPAQQHVYTSQ*ADWVMQ Trigger: TTGCATTACCCAGTCTGCTCACTGGCTTGTATAGAC...ATGCTGCTGTGCTGGGAGGAACTTCAGAAGCACCAAGATCAGTCTCACAAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | CATTCTGCTGTGCTAATGTATCCTCAGCACTACTTGGCATCTGCCCCACGGACGAAGGCAACAACTTCCTaGCATGAAATCAGAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: HSAVLMYPQHYLASAPRTKATTS*HEIRKA Trigger: GGCTTTTCTGATTTCATGGCAGGAAGTTGTTGCCTT...CGTCCGTGGGGCAGATGCCAAGTAGTGCTGAGGATACATTAGCACAGCAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | GTCCTTGTGAGACTGATCTTGGTGCTTCTGAAGTTCCTCCCAGCACAGCAGCATAAGGCAACAACTTCCTaGCATGAAATCAGAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLVRLILVLLKFLPAQQHKATTS*HEIRKA Trigger: GGCTTTTCTGATTTCATGGCAGGAAGTTGTTGCCTT...ATGCTGCTGTGCTGGGAGGAACTTCAGAAGCACCAAGATCAGTCTCACAAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CCA 90 bp | CATTCTGCTGTGCTAATGTATCCTCAGCACTACTTGGCATCTGCCCCACGGACGGTGAGCAGACAGATGTaGTATCTGGTAAACCTAATA | + |
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Preference number: 4 (lower is better) Translates to: HSAVLMYPQHYLASAPRTVSRQM*YLVNLI Trigger: TATTAGGTTTACCAGATACCACATCTGTCTGCTCAC...CGTCCGTGGGGCAGATGCCAAGTAGTGCTGAGGATACATTAGCACAGCAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR GCA 90 bp | ACAATGTTGTCGAGCAGGCATAAACATTCTGCTGTGCTAATGTATCCTCAGCACATGGGCCTCTCCACTTaGTTAAGTCTATGGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: TMLSSRHKHSAVLMYPQHMGLST*LSLWTG Trigger: TCCAGTCCATAGACTTAAGCAAGTGGAGAGGCCCAT...GTGCTGAGGATACATTAGCACAGCAGAATGTTTATGCCTGCTCGACAACATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CCA 90 bp | TCGAGCAGGCATAAACATTCTGCTGTGCTAATGTATCCTCAGCACTACTTGGCAGTGAGCAGACAGATGTaGTATCTGGTAAACCTAATA | + |
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Preference number: 4 (lower is better) Translates to: SSRHKHSAVLMYPQHYLAVSRQM*YLVNLI Trigger: TATTAGGTTTACCAGATACCACATCTGTCTGCTCAC...TGCCAAGTAGTGCTGAGGATACATTAGCACAGCAGAATGTTTATGCCTGCTCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CCA 90 bp | ACAATGTTGTCGAGCAGGCATAAACATTCTGCTGTGCTAATGTATCCTCAGCACGTGAGCAGACAGATGTaGTATCTGGTAAACCTAATA | + |
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Preference number: 4 (lower is better) Translates to: TMLSSRHKHSAVLMYPQHVSRQM*YLVNLI Trigger: TATTAGGTTTACCAGATACCACATCTGTCTGCTCAC...GTGCTGAGGATACATTAGCACAGCAGAATGTTTATGCCTGCTCGACAACATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CAA 90 bp | GGCATCTGCCCCACGGACGCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTGCGATGAGGAAACTGTaGACAAAGTACAGCCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: GICPTDAVLERGTRASVPAMRKL*TKYSQG Trigger: CCCCTGGCTGTACTTTGTCAACAGTTTCCTCATCGC...AGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCGTCCGTGGGGCAGATGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CAA 90 bp | GGCATCTGCCCCACGGACGCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTCACCTAGATGACTGCTaGCTGGCTCTGGACAGATTA | + |
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Preference number: 5 (lower is better) Translates to: GICPTDAVLERGTRASVPHLDDC*LALDRL Trigger: TAATCTGTCCAGAGCCAGCAAGCAGTCATCTAGGTG...AGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCGTCCGTGGGGCAGATGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS TCA 90 bp | CCTGAAGTGCTACAAAGGGAAACCAGGTCCCAAGAAAGCACACGATaGGCCTGGGCAAGAGTGCTTCTCTGCAGCTCAGGGCGTAACCGC | + |
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Preference number: 5 (lower is better) Translates to: PEVLQRETRSQESTR*AWARVLLCSSGRNR Trigger: GCGGTTACGCCCTGAGCTGCAGAGAAGCACTCTTGCCCAGGCTCATCGTGTGCTTTCTTGGGACCTGGTTTCCCTTTGTAGCACTTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CAA 90 bp | CTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGTCCACCTAGATGACTGCTaGCTGGCTCTGGACAGATTA | + |
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Preference number: 5 (lower is better) Translates to: LCWKGGLELQFLSRATSVHLDDC*LALDRL Trigger: TAATCTGTCCAGAGCCAGCAAGCAGTCATCTAGGTG...GACAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CAA 90 bp | GTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGTCCTCACCTAGATGACTGCTaGCTGGCTCTGGACAGATTA | + |
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Preference number: 5 (lower is better) Translates to: VLERGTRASVPVPSHLCPHLDDC*LALDRL Trigger: TAATCTGTCCAGAGCCAGCAAGCAGTCATCTAGGTG...AGGACAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCCTTTCCAGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS CCA 90 bp | GGGCAAGAGTGCTTCTCTGCAGCTCAGGGCGTAACCGCAGTGGAGTaGGAAAGGAAAGTAGAGGGCGGCCTTGCTCTTATAGGATGCTAT | + |
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Preference number: 5 (lower is better) Translates to: GQECFSAAQGVTAVE*ERKVEGGLALIGCY Trigger: ATAGCATCCTATAAGAGCAAGGCCGCCCTCTACTTTCCTTTCCCACTCCACTGCGGTTACGCCCTGAGCTGCAGAGAAGCACTCTTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CAA 90 bp | CTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGTCCTTGTGAGACTGATCTTGGCGATGAGGAAACTGTaGACAAAGTACAGCCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: LELQFLSRATSVLVRLILAMRKL*TKYSQG Trigger: CCCCTGGCTGTACTTTGTCAACAGTTTCCTCATCGC...CAAGATCAGTCTCACAAGGACAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CAA 90 bp | GGCATCTGCCCCACGGACGCTGTGCTGGAAAGGGGGACTCGAGCTTCAGTTCCTAGTGAAGGAAATAATTaGTGTGAGCAGACAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: GICPTDAVLERGTRASVPSEGNN*CEQTDV Trigger: CACATCTGTCTGCTCACACAAATTATTTCCTTCACT...AGGAACTGAAGCTCGAGTCCCCCTTTCCAGCACAGCGTCCGTGGGGCAGATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CAA 90 bp | CATTCTGCTGTGCTAATGTATCCTCAGCACTACTTGGCATCTGCCCCACGGACGGCGATGAGGAAACTGTaGACAAAGTACAGCCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: HSAVLMYPQHYLASAPRTAMRKL*TKYSQG Trigger: CCCCTGGCTGTACTTTGTCAACAGTTTCCTCATCGC...CGTCCGTGGGGCAGATGCCAAGTAGTGCTGAGGATACATTAGCACAGCAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CAA 90 bp | GGGGGACTCGAGCTTCAGTTCCTGTCCCGAGCCACCTCTGTCCTTGTGAGACTGAGTGAAGGAAATAATTaGTGTGAGCAGACAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: GGLELQFLSRATSVLVRLSEGNN*CEQTDV Trigger: CACATCTGTCTGCTCACACAAATTATTTCCTTCACT...CAGTCTCACAAGGACAGAGGTGGCTCGGGACAGGAACTGAAGCTCGAGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CAA 90 bp | GTCCTTGTGAGACTGATCTTGGTGCTTCTGAAGTTCCTCCCAGCACAGCAGCATCACCTAGATGACTGCTaGCTGGCTCTGGACAGATTA | + |
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Preference number: 5 (lower is better) Translates to: VLVRLILVLLKFLPAQQHHLDDC*LALDRL Trigger: TAATCTGTCCAGAGCCAGCAAGCAGTCATCTAGGTG...ATGCTGCTGTGCTGGGAGGAACTTCAGAAGCACCAAGATCAGTCTCACAAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CAA 90 bp | CCTGTCCCGAGCCACCTCTGTCCTTGTGAGACTGATCTTGGTGCTTCTGAAGTTAGTGAAGGAAATAATTaGTGTGAGCAGACAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: PVPSHLCPCETDLGASEVSEGNN*CEQTDV Trigger: CACATCTGTCTGCTCACACAAATTATTTCCTTCACT...AACTTCAGAAGCACCAAGATCAGTCTCACAAGGACAGAGGTGGCTCGGGACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CAA 90 bp | GTCCTTGTGAGACTGATCTTGGTGCTTCTGAAGTTCCTCCCAGCACAGCAGCATAGTGAAGGAAATAATTaGTGTGAGCAGACAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: VLVRLILVLLKFLPAQQHSEGNN*CEQTDV Trigger: CACATCTGTCTGCTCACACAAATTATTTCCTTCACT...ATGCTGCTGTGCTGGGAGGAACTTCAGAAGCACCAAGATCAGTCTCACAAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS TCA 90 bp | CTTGCTGGCTCTGGACAGATTACACCAGTAGTCTATACAAGCCAGTaGGCAGACTGGGTAATGCAAGAAGCCATAAGTGAAGGAAATAAT | + |
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Preference number: 5 (lower is better) Translates to: LAGSGQITPVVYTSQ*ADWVMQEAISEGNN Trigger: ATTATTTCCTTCACTTATGGCTTCTTGCATTACCCAGTCTGCTCACTGGCTTGTATAGACTACTGGTGTAATCTGTCCAGAGCCAGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS-3UTR CAA 90 bp | ACAATGTTGTCGAGCAGGCATAAACATTCTGCTGTGCTAATGTATCCTCAGCACAGTGAAGGAAATAATTaGTGTGAGCAGACAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: TMLSSRHKHSAVLMYPQHSEGNN*CEQTDV Trigger: CACATCTGTCTGCTCACACAAATTATTTCCTTCACT...GTGCTGAGGATACATTAGCACAGCAGAATGTTTATGCCTGCTCGACAACATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS GCA 72 bp | GGTCCCAAGAAAGCACACGATGAGCCTGGGCAAGAGTaGTTCTCTGCAGCTCAGGGCGTAACCGCAGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GPKKAHDEPGQE*FSAAQGVTAVE Trigger: CTCCACTGCGGTTACGCCCTGAGCTGCAGAGAAGCACTCTTGCCCAGGCTCATCGTGTGCTTTCTTGGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS TCA 72 bp | CTACAAAGGGAAACCAGGTCCCAAGAAAGCACACGATaGGCCTGGGCAAGAGTGCTTCTCTGCAGCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LQRETRSQESTR*AWARVLLCSSG Trigger: CCCTGAGCTGCAGAGAAGCACTCTTGCCCAGGCTCATCGTGTGCTTTCTTGGGACCTGGTTTCCCTTTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS TCA 72 bp | AATGTTTACCAACAGCAGGAGATCGACAAGTGCGAGTaGGAAGCAGAAGTACTCCATCAAAGTCCAGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: NVYQQQEIDKCE*EAEVLHQSPAG Trigger: GCCCGCTGGACTTTGATGGAGTACTTCTGCTTCTCACTCGCACTTGTCGATCTCCTGCTGTTGGTAAACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS CCA 72 bp | GGACATGGGCCTCTCCACTTGCTTAAGTCTATGGACTaGAACAAAGCAGCATTTCCAGTTGATGAAAGGATC | + |
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Preference number: 6 (lower is better) Translates to: GHGPLHLLKSMD*NKAAFPVDERI Trigger: GATCCTTTCATCAACTGGAAATGCTGCTTTGTTCCAGTCCATAGACTTAAGCAAGTGGAGAGGCCCATGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS TCA 72 bp | TCTGGACAGATTACACCAGTAGTCTATACAAGCCAGTaGGCAGACTGGGTAATGCAAGAAGCCATAAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: SGQITPVVYTSQ*ADWVMQEAISE Trigger: TTCACTTATGGCTTCTTGCATTACCCAGTCTGCTCACTGGCTTGTATAGACTACTGGTGTAATCTGTCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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| CDS CCA 72 bp | ACTATGGACATGGGCCTCTCCACTTGCTTAAGTCTATaGACTGGAACAAAGCAGCATTTCCAGTTGATGAAA | + |
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Preference number: 6 (lower is better) Translates to: TMDMGLSTCLSL*TGTKQHFQLMK Trigger: TTTCATCAACTGGAAATGCTGCTTTGTTCCAGTCCATAGACTTAAGCAAGTGGAGAGGCCCATGTCCATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046748.13 ENSMUST00000108258.8 ENSMUST00000108259.8 ENSMUST00000108261.8 ENSMUST00000166278.7 |
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