Pregenerated sensors for GPR157 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047875Ensembl transcript IDs: ENSMUST00000094451.4
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCTGGCCCCAAGGATTCTTCTATTCCTCTTCAGCTCTGAACCCTaGCTGCCTAGAAGACCCACTTGGCCACCGGCTGAGCTAAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: LLAPRILLFLFSSEP*LPRRPTWPPAELRL Trigger: CAACCTTAGCTCAGCCGGTGGCCAAGTGGGTCTTCTAGGCAGCCAGGGTTCAGAGCTGAAGAGGAATAGAAGAATCCTTGGGGCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR TCA 90 bp | AAGCAAAGTGCAGAGCCAGACCCCCTCCCCCTGTATGAGTCACCGTaGGGAGAGGGCTCTGTGAGAACAGTAGGTGAACTGGTAATTGTC | + |
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Preference number: 1 (lower is better) Translates to: KQSAEPDPLPLYESP*GEGSVRTVGELVIV Trigger: GACAATTACCAGTTCACCTACTGTTCTCACAGAGCCCTCTCCTCACGGTGACTCATACAGGGGGAGGGGGTCTGGCTCTGCACTTTGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR GCA 90 bp | AAACAAACCCCACTGAACCAGGACATGAGTGTGCAAGGAACACACTaGCTGCCTGCAAGTCTGGGAGGTAGAAGAGTCCATACTGATGGC | + |
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Preference number: 1 (lower is better) Translates to: KQTPLNQDMSVQGTH*LPASLGGRRVHTDG Trigger: GCCATCAGTATGGACTCTTCTACCTCCCAGACTTGCAGGCAGGCAGTGTGTTCCTTGCACACTCATGTCCTGGTTCAGTGGGGTTTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR CCA 90 bp | CCCTCTCTCTCTCTCTGCCTCAGAAAGTCAAAGGCAGGAAGCAGCTaGCAACGGATTTGCAGAACAAGATTCACAAAGTGTACCAGGCGG | + |
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Preference number: 1 (lower is better) Translates to: PSLSLCLRKSKAGSS*QRICRTRFTKCTRR Trigger: CCGCCTGGTACACTTTGTGAATCTTGTTCTGCAAATCCGTTGCCAGCTGCTTCCTGCCTTTGACTTTCTGAGGCAGAGAGAGAGAGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR CCA 90 bp | TGTCCAGCTGGGTTTATCCAACATCATTTCCTCCGTAGTATTTGGTaGTTTATTTTCTCCCCTCCAGGAGACAAATTCCTAGAATTTCTG | + |
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Preference number: 1 (lower is better) Translates to: CPAGFIQHHFLRSIW*FIFSPPGDKFLEFL Trigger: CAGAAATTCTAGGAATTTGTCTCCTGGAGGGGAGAAAATAAACCACCAAATACTACGGAGGAAATGATGTTGGATAAACCCAGCTGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR CCA 90 bp | CTCTGTCCAGCTGGGTTTATCCAACATCATTTCCTCCGTAGTATTTaGTGGTTTATTTTCTCCCCTCCAGGAGACAAATTCCTAGAATTT | + |
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Preference number: 1 (lower is better) Translates to: LCPAGFIQHHFLRSI*WFIFSPPGDKFLEF Trigger: AAATTCTAGGAATTTGTCTCCTGGAGGGGAGAAAATAAACCACCAAATACTACGGAGGAAATGATGTTGGATAAACCCAGCTGGACAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGAGGGGCATGGGATTGAACTCAGTGGCGGAGCACCTGCCTAACAGGCACGGTGGCCGGGGACACTaGGAACCAATGCCCTGGCGG | + |
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Preference number: 2 (lower is better) Translates to: VGRGMGLNSVAEHLPNRHGGRGH*EPMPWR Trigger: CCGCCAGGGCATTGGTTCTCAGTGTCCCCGGCCACC...GTGCCTGTTAGGCAGGTGCTCCGCCACTGAGTTCAATCCCATGCCCCTCCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGAGGGGCATGGGATTGAACTCAGTGGCGGAGCACCTGCCTAACAGGCACTGGCTGTCCCTCCACTaGGCTCCGATCTTCACTTTA | + |
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Preference number: 2 (lower is better) Translates to: VGRGMGLNSVAEHLPNRHWLSLH*APIFTL Trigger: TAAAGTGAAGATCGGAGCCCAGTGGAGGGACAGCCA...GTGCCTGTTAGGCAGGTGCTCCGCCACTGAGTTCAATCCCATGCCCCTCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGTCAGTGCTCTTAGCCGCTGAGCCATCTCTCCAGCCTGAGAACCCTGTTCAGTCAAGCCTGGGATaGGTCCACAGGTACGGATCC | + |
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Preference number: 2 (lower is better) Translates to: EQSVLLAAEPSLQPENPVQSSLG*VHRYGS Trigger: GGATCCGTACCTGTGGACCCATCCCAGGCTTGACTG...AACAGGGTTCTCAGGCTGGAGAGATGGCTCAGCGGCTAAGAGCACTGACTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR TCA 90 bp | AGTGTGCAAGGAACACACTGCCTGCCTGCAAGTCTGGGAGGTAGAAGAGTCCATCACTTTAGGCCAGGCTaGCAGCATGCTTGGTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SVQGTHCLPASLGGRRVHHFRPG*QHAWSP Trigger: AGGAGACCAAGCATGCTGTCAGCCTGGCCTAAAGTG...ATGGACTCTTCTACCTCCCAGACTTGCAGGCAGGCAGTGTGTTCCTTGCACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGTCAGTGCTCTTAGCCGCTGAGCCATCTCTCCAGCCTGAGAACCCTGTTGTGCTAGGACCAACCTaGAAACTACACGGAGCTACA | + |
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Preference number: 2 (lower is better) Translates to: EQSVLLAAEPSLQPENPVVLGPT*KLHGAT Trigger: TGTAGCTCCGTGTAGTTTCCAGGTTGGTCCTAGCAC...AACAGGGTTCTCAGGCTGGAGAGATGGCTCAGCGGCTAAGAGCACTGACTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAAGGAGCTTTCTTAGACTCCCAAAAGGGAACCCACCTCTTGTAGAGTTTGGAGGGGCATGGGATTaGACTCAGTGGCGGAGCACC | + |
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Preference number: 2 (lower is better) Translates to: KPRSFLRLPKGNPPLVEFGGAWD*TQWRST Trigger: GGTGCTCCGCCACTGAGTTCAATCCCATGCCCCTCC...AAACTCTACAAGAGGTGGGTTCCCTTTTGGGAGTCTAAGAAAGCTCCTTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR GCA 90 bp | GGATTTGCAGAACAAGATTCACAAAGTGTACCAGGCGGTGGTGACACACGTCTTGGGCTGGAGCTGAGCTaGCTTCTGTCCTGGTACCTG | + |
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Preference number: 2 (lower is better) Translates to: GFAEQDSQSVPGGGDTRLGLELS*LLSWYL Trigger: CAGGTACCAGGACAGAAGGCAGCTCAGCTCCAGCCC...AAGACGTGTGTCACCACCGCCTGGTACACTTTGTGAATCTTGTTCTGCAAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTCTCTCTCTCTCTGCCTCAGAAAGTCAAAGGCAGGAAGCAGCTGGCAACGAGTGTGTGCCCGGGTaGTTTTCATCAATGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: LPLSLSASESQRQEAAGNECVPG*FSSMMA Trigger: TGCCATCATTGATGAAAACCACCCGGGCACACACTC...GTTGCCAGCTGCTTCCTGCCTTTGACTTTCTGAGGCAGAGAGAGAGAGAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR GCA 90 bp | TGGCATAGGCCTGTAATCCCAGAAACAGTAAAACTGCTTAAGGCCTGCCTGGACCTACCTCACCTTGACTaGAAGGTGGCGGGCACACTT | + |
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Preference number: 2 (lower is better) Translates to: WHRPVIPETVKLLKACLDLPHLD*KVAGTL Trigger: AAGTGTGCCCGCCACCTTGCAGTCAAGGTGAGGTAG...GTCCAGGCAGGCCTTAAGCAGTTTTACTGTTTCTGGGATTACAGGCCTATGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR GCA 90 bp | GGATTTGCAGAACAAGATTCACAAAGTGTACCAGGCGGTGGTGACACACGTCTTCGGATGCCCCCTGCCTaGCTTTCCTTGAACAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GFAEQDSQSVPGGGDTRLRMPPA*LSLNKA Trigger: GGCTTTGTTCAAGGAAAGGCAGGCAGGGGGCATCCG...AAGACGTGTGTCACCACCGCCTGGTACACTTTGTGAATCTTGTTCTGCAAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGTCAGTGCTCTTAGCCGCTGAGCCATCTCTCCAGCCTGAGAACCCTGTTCATTCACCTTCAGGGTaGAATCAGATCCATTCACTG | + |
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Preference number: 2 (lower is better) Translates to: EQSVLLAAEPSLQPENPVHSPSG*NQIHSL Trigger: CAGTGAATGGATCTGATTCCACCCTGAAGGTGAATG...AACAGGGTTCTCAGGCTGGAGAGATGGCTCAGCGGCTAAGAGCACTGACTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR CAA 90 bp | TCTCTGCCTCAGAAAGTCAAAGGCAGGAAGCAGCTGGCAACGGATTaGCAGAACAAGATTCACAAAGTGTACCAGGCGGTGGTGACACAC | + |
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Preference number: 2 (lower is better) Translates to: SLPQKVKGRKQLATD*QNKIHKVYQAVVTH Trigger: GTGTGTCACCACCGCCTGGTACACTTTGTGAATCTTGTTCTGCAAATCCGTTGCCAGCTGCTTCCTGCCTTTGACTTTCTGAGGCAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR TCA 90 bp | GGATTTGCAGAACAAGATTCACAAAGTGTACCAGGCGGTGGTGACACACGTCTTCTGCCTGCCTTTCCTTaGACAAAGCCCCAAACAGCC | + |
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Preference number: 2 (lower is better) Translates to: GFAEQDSQSVPGGGDTRLLPAFP*TKPQTA Trigger: GGCTGTTTGGGGCTTTGTTCAAGGAAAGGCAGGCAG...AAGACGTGTGTCACCACCGCCTGGTACACTTTGTGAATCTTGTTCTGCAAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAAGGAGCTTTCTTAGACTCCCAAAAGGGAACCCACCTCTTGTAGAGTTTAGCTGCCTTCTGTCCTaGTACCTGGAGGGAACGAGG | + |
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Preference number: 2 (lower is better) Translates to: KPRSFLRLPKGNPPLVEFSCLLS*YLEGTR Trigger: CCTCGTTCCCTCCAGGTACCAGGACAGAAGGCAGCT...AAACTCTACAAGAGGTGGGTTCCCTTTTGGGAGTCTAAGAAAGCTCCTTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGTCAGTGCTCTTAGCCGCTGAGCCATCTCTCCAGCCTGAGAACCCTGTTCTCCGTAGTATTTGGTaGTTTATTTTCTCCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: EQSVLLAAEPSLQPENPVLRSIW*FIFSPP Trigger: TGGAGGGGAGAAAATAAACCACCAAATACTACGGAG...AACAGGGTTCTCAGGCTGGAGAGATGGCTCAGCGGCTAAGAGCACTGACTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CCA 90 bp | TGGCATAGGCCTGTAATCCCAGAAACAGTAAAACTGCTTAAGGCCTGCCTGGACGCATCAGAGAAAACTTaGGTAAGCCCCAGGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: WHRPVIPETVKLLKACLDASEKT*VSPRLQ Trigger: CTGGAGCCTGGGGCTTACCCAAGTTTTCTCTGATGC...GTCCAGGCAGGCCTTAAGCAGTTTTACTGTTTCTGGGATTACAGGCCTATGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR GCA 90 bp | AAGCCAAGGAGCTTTCTTAGACTCCCAAAAGGGAACCCACCTCTTGTAGAGTTTGTGCAAGGAACACACTaGCTGCCTGCAAGTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: KPRSFLRLPKGNPPLVEFVQGTH*LPASLG Trigger: TCCCAGACTTGCAGGCAGGCAGTGTGTTCCTTGCAC...AAACTCTACAAGAGGTGGGTTCCCTTTTGGGAGTCTAAGAAAGCTCCTTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR TCA 90 bp | TGGCATAGGCCTGTAATCCCAGAAACAGTAAAACTGCTTAAGGCCTGCCTGGACGGTGGTTTTCATCAATaGTGGCAGTCTCCTGTGACT | + |
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Preference number: 2 (lower is better) Translates to: WHRPVIPETVKLLKACLDGGFHQ*WQSPVT Trigger: AGTCACAGGAGACTGCCATCATTGATGAAAACCACC...GTCCAGGCAGGCCTTAAGCAGTTTTACTGTTTCTGGGATTACAGGCCTATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR TCA 90 bp | GGATTTGCAGAACAAGATTCACAAAGTGTACCAGGCGGTGGTGACACACGTCTTGCACACACTGCTTTCTaGAATGAGGGATGTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: GFAEQDSQSVPGGGDTRLAHTAF*NEGCVG Trigger: ACCCACACATCCCTCATTTCAGAAAGCAGTGTGTGC...AAGACGTGTGTCACCACCGCCTGGTACACTTTGTGAATCTTGTTCTGCAAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CCA 90 bp | GGATTTGCAGAACAAGATTCACAAAGTGTACCAGGCGGTGGTGACACACGTCTTAGCAATCCTGGCCAGTaGCATCAGAGAAAACTTGGG | + |
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Preference number: 2 (lower is better) Translates to: GFAEQDSQSVPGGGDTRLSNPGQ*HQRKLG Trigger: CCCAAGTTTTCTCTGATGCCACTGGCCAGGATTGCT...AAGACGTGTGTCACCACCGCCTGGTACACTTTGTGAATCTTGTTCTGCAAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAAGGAGCTTTCTTAGACTCCCAAAAGGGAACCCACCTCTTGTAGAGTTTCACTGCTTTCTGAAATaGGGGATGTGTGGGTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: KPRSFLRLPKGNPPLVEFHCFLK*GMCGWK Trigger: CTTCCACCCACACATCCCTCATTTCAGAAAGCAGTG...AAACTCTACAAGAGGTGGGTTCCCTTTTGGGAGTCTAAGAAAGCTCCTTGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CCA 90 bp | GGATTTGCAGAACAAGATTCACAAAGTGTACCAGGCGGTGGTGACACACGTCTTAGCATGGGAAACAGATaGAAAGAGCCAAGTGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: GFAEQDSQSVPGGGDTRLSMGNR*KEPSVD Trigger: GTCTACACTTGGCTCTTTCCATCTGTTTCCCATGCT...AAGACGTGTGTCACCACCGCCTGGTACACTTTGTGAATCTTGTTCTGCAAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CCA 90 bp | TGGCATAGGCCTGTAATCCCAGAAACAGTAAAACTGCTTAAGGCCTGCCTGGACTTCCTCCGTAGTATTTaGTGGTTTATTTTCTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: WHRPVIPETVKLLKACLDFLRSI*WFIFSP Trigger: AGGGGAGAAAATAAACCACCAAATACTACGGAGGAA...GTCCAGGCAGGCCTTAAGCAGTTTTACTGTTTCTGGGATTACAGGCCTATGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAAGGAGCTTTCTTAGACTCCCAAAAGGGAACCCACCTCTTGTAGAGTTTAGCTTCCTGGGAAGTTaGGGTAGGAAAATCTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: KPRSFLRLPKGNPPLVEFSFLGS*GRKILS Trigger: ACTTAAGATTTTCCTACCTCAACTTCCCAGGAAGCT...AAACTCTACAAGAGGTGGGTTCCCTTTTGGGAGTCTAAGAAAGCTCCTTGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR TCA 72 bp | GGCACCGGGCCTCGGGTCACCACCAGCCACCTTCGGTaGCAGGGCAGCATGGGAAACAGATGGAAAGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: GTGPRVTTSHLR*QGSMGNRWKEP Trigger: TGGCTCTTTCCATCTGTTTCCCATGCTGCCCTGTCACCGAAGGTGGCTGGTGGTGACCCGAGGCCCGGTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR GCA 72 bp | AGGCTCCAGGAGCAGGGCTTTCGGATGCCCCCTGCCTaGCTTTCCTTGAACAAAGCCCCAAACAGCCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: RLQEQGFRMPPA*LSLNKAPNSQG Trigger: ACCCTGGCTGTTTGGGGCTTTGTTCAAGGAAAGGCAGGCAGGGGGCATCCGAAAGCCCTGCTCCTGGAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR CCA 72 bp | AGAATCCAAGGGCGCTACCTCACCTTGACTGCAAGGTaGCGGGCACACTTCCCACACCGAGAGCCTGCACGT | + |
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Preference number: 3 (lower is better) Translates to: RIQGRYLTLTAR*RAHFPHREPAR Trigger: ACGTGCAGGCTCTCGGTGTGGGAAGTGTGCCCGCCACCTTGCAGTCAAGGTGAGGTAGCGCCCTTGGATTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR CCA 72 bp | GGACAGCAATCCTGGCCAGTGGCATCAGAGAAAACTTaGGTAAGCCCCAGGCTCCAGGAGCAGGGCTTTCGG | + |
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Preference number: 3 (lower is better) Translates to: GQQSWPVASEKT*VSPRLQEQGFR Trigger: CCGAAAGCCCTGCTCCTGGAGCCTGGGGCTTACCCAAGTTTTCTCTGATGCCACTGGCCAGGATTGCTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CAA 90 bp | CTCCCTCTCTCTCTCTCTGCCTCAGAAAGTCAAAGGCAGGAAGCAGCTGGCAACCCGCTCTGGCCAGGCTaGCTAGCCAAAGGCGACAAT | + |
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Preference number: 3 (lower is better) Translates to: LPLSLSASESQRQEAAGNPLWPG*LAKGDN Trigger: ATTGTCGCCTTTGGCTAGCAAGCCTGGCCAGAGCGG...GTTGCCAGCTGCTTCCTGCCTTTGACTTTCTGAGGCAGAGAGAGAGAGAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR TCA 72 bp | ACACCGAGAGCCTGCACGTCGGCACACACTGCTTTCTaGAATGAGGGATGTGTGGGTGGAAGAGCCACTGAG | + |
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Preference number: 3 (lower is better) Translates to: TPRACTSAHTAF*NEGCVGGRATE Trigger: CTCAGTGGCTCTTCCACCCACACATCCCTCATTTCAGAAAGCAGTGTGTGCCGACGTGCAGGCTCTCGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR TCA 72 bp | CCTCCACTGGGCTCCGATCTTCACTTTAGGCCAGGCTaGCAGCATGCTTGGTCTCCTAATCCTGAAGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: PPLGSDLHFRPG*QHAWSPNPEAG Trigger: TCCTGCTTCAGGATTAGGAGACCAAGCATGCTGTCAGCCTGGCCTAAAGTGAAGATCGGAGCCCAGTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR TCA 72 bp | CCAGGCTTAGTTCCCTTTGCCCAGAGTTCACAGCTATaGCTCCAGATTCAGGGGATCAGAGTCCCTCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: PGLVPFAQSSQL*LQIQGIRVPLA Trigger: GGCCAGAGGGACTCTGATCCCCTGAATCTGGAGTCATAGCTGTGAACTCTGGGCAAAGGGAACTAAGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR GCA 72 bp | TCTCTCCCTCTCTCCCTCTCTCCCTCTCTCTCTCTCTaGCTCAGAAAGTCAAAGGCAGGAAGCAGCTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: SLPLSLSPSLSL*LRKSKAGSSWQ Trigger: TTGCCAGCTGCTTCCTGCCTTTGACTTTCTGAGGCAGAGAGAGAGAGAGGGAGAGAGGGAGAGAGGGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR CCA 72 bp | CCAAGGATTCTTCTATTCCTCTTCAGCTCTGAACCCTaGCTGCCTAGAAGACCCACTTGGCCACCGGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: PRILLFLFSSEP*LPRRPTWPPAE Trigger: CTCAGCCGGTGGCCAAGTGGGTCTTCTAGGCAGCCAGGGTTCAGAGCTGAAGAGGAATAGAAGAATCCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CAA 90 bp | GAGCAGTCAGTGCTCTTAGCCGCTGAGCCATCTCTCCAGCCTGAGAACCCTGTTGGTTTTGTGAGGGTATaGACAGAATCCAAGGGCGCT | + |
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Preference number: 3 (lower is better) Translates to: EQSVLLAAEPSLQPENPVGFVRV*TESKGA Trigger: AGCGCCCTTGGATTCTGTCAATACCCTCACAAAACC...AACAGGGTTCTCAGGCTGGAGAGATGGCTCAGCGGCTAAGAGCACTGACTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR TCA 72 bp | ATGCCCATGAGTGTGTGCCCGGGTGGTTTTCATCAATaGTGGCAGTCTCCTGTGACTTCCGTGGACTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: MPMSVCPGGFHQ*WQSPVTSVDLG Trigger: TCCCAAGTCCACGGAAGTCACAGGAGACTGCCATCATTGATGAAAACCACCCGGGCACACACTCATGGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR GCA 72 bp | CCACTGAACCAGGACATGAGTGTGCAAGGAACACACTaGCTGCCTGCAAGTCTGGGAGGTAGAAGAGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: PLNQDMSVQGTH*LPASLGGRRVH Trigger: ATGGACTCTTCTACCTCCCAGACTTGCAGGCAGGCAGTGTGTTCCTTGCACACTCATGTCCTGGTTCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR TCA 72 bp | TCCTGGTACCTGGAGGGAACGAGGATGTTAAGTGATTaGCTAATGGACAGGACTCTGGACTCTGGCCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: SWYLEGTRMLSD*LMDRTLDSGLC Trigger: GCACAGGCCAGAGTCCAGAGTCCTGTCCATTAGTCAATCACTTAACATCCTCGTTCCCTCCAGGTACCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CAA 90 bp | TGGCATAGGCCTGTAATCCCAGAAACAGTAAAACTGCTTAAGGCCTGCCTGGACCCTGCCTGCCTTTCCTaGAACAAAGCCCCAAACAGC | + |
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Preference number: 3 (lower is better) Translates to: WHRPVIPETVKLLKACLDPACLS*NKAPNS Trigger: GCTGTTTGGGGCTTTGTTCAAGGAAAGGCAGGCAGG...GTCCAGGCAGGCCTTAAGCAGTTTTACTGTTTCTGGGATTACAGGCCTATGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CAA 90 bp | GGATTTGCAGAACAAGATTCACAAAGTGTACCAGGCGGTGGTGACACACGTCTTAGGCTGAGGTCACATTaGGGTGACAGAGGAACACGG | + |
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Preference number: 3 (lower is better) Translates to: GFAEQDSQSVPGGGDTRLRLRSH*GDRGTR Trigger: CCGTGTTCCTCTGTCACCCAAATGTGACCTCAGCCT...AAGACGTGTGTCACCACCGCCTGGTACACTTTGTGAATCTTGTTCTGCAAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR TCA 72 bp | TCTGTCCTGGTACCTGGAGGGAACGAGGATGTTAAGTaGTTGACTAATGGACAGGACTCTGGACTCTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: SVLVPGGNEDVK*LTNGQDSGLWP Trigger: AGGCCAGAGTCCAGAGTCCTGTCCATTAGTCAATCACTTAACATCCTCGTTCCCTCCAGGTACCAGGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR TCA 72 bp | TGCAGAACAAGATTCACAAAGTGTACCAGGCGGTGGTaGCACACGTCTTTAATCCCAGCACTCAGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: CRTRFTKCTRRW*HTSLIPALRRQ Trigger: CTGCCTCCTGAGTGCTGGGATTAAAGACGTGTGTCACCACCGCCTGGTACACTTTGTGAATCTTGTTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR CCA 72 bp | GCCCGGACTCCATACTGCGATGTCTGGGATCCAAGATaGTGTTCATTATTATTCAGTCAAGCCTGGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: ARTPYCDVWDPR*CSLLFSQAWDG Trigger: CCCATCCCAGGCTTGACTGAATAATAATGAACACCATCTTGGATCCCAGACATCGCAGTATGGAGTCCGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| 3UTR TCA 72 bp | CAAATGGTTGTGAGCCACCATGTGGTTGCTGGAATTTaGACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGI*TQDLRKSSQCS Trigger: AGAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATTCCAGCAACCACATGGTGGCTCACAACCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| 3UTR GCA 72 bp | AGAAAGTCAAAGGCAGGAAGCAGCTGGCAACGGATTTaGAGAACAAGATTCACAAAGTGTACCAGGCGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RKSKAGSSWQRI*RTRFTKCTRRW Trigger: CCACCGCCTGGTACACTTTGTGAATCTTGTTCTGCAAATCCGTTGCCAGCTGCTTCCTGCCTTTGACTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR-3UTR CAA 90 bp | TGGCATAGGCCTGTAATCCCAGAAACAGTAAAACTGCTTAAGGCCTGCCTGGACCTGACAGTGCACACATaGGCTGTAATATCTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: WHRPVIPETVKLLKACLDLTVHT*AVISSQ Trigger: CTGTGAAGATATTACAGCCAATGTGTGCACTGTCAG...GTCCAGGCAGGCCTTAAGCAGTTTTACTGTTTCTGGGATTACAGGCCTATGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| 3UTR TCA 72 bp | CTAGCCAAAGGCGACAATTCTAGCTTCCTGGGAAGTTaGGGTAGGAAAATCTTAAGTTCAAGACCAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LAKGDNSSFLGS*GRKILSSRPAW Trigger: CCAGGCTGGTCTTGAACTTAAGATTTTCCTACCTCAACTTCCCAGGAAGCTAGAATTGTCGCCTTTGGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| 3UTR CCA 72 bp | ATATCTTCACAGGATCTCAGGACACCCTACACAGACTaGTTTTGTAAGCAGACAGAGTACCAAGCCAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ISSQDLRTPYTD*FCKQTEYQAKE Trigger: CTCCTTGGCTTGGTACTCTGTCTGCTTACAAAACCAGTCTGTGTAGGGTGTCCTGAGATCCTGTGAAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| 3UTR CCA 72 bp | TCTCTCTGCCTCAGAAAGTCAAAGGCAGGAAGCAGCTaGCAACGGATTTGCAGAACAAGATTCACAAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLCLRKSKAGSS*QRICRTRFTKC Trigger: ACACTTTGTGAATCTTGTTCTGCAAATCCGTTGCCAGCTGCTTCCTGCCTTTGACTTTCTGAGGCAGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| 3UTR CCA 72 bp | CTCATTACAAATGGTTGTGAGCCACCATGTGGTTGCTaGAATTTGAACTCAGGACCTTCGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LITNGCEPPCGC*NLNSGPSEEQS Trigger: TGACTGCTCTTCCGAAGGTCCTGAGTTCAAATTCCAGCAACCACATGGTGGCTCACAACCATTTGTAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| 3UTR CCA 72 bp | GGGTTTATCCAACATCATTTCCTCCGTAGTATTTGGTaGTTTATTTTCTCCCCTCCAGGAGACAAATTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GFIQHHFLRSIW*FIFSPPGDKFL Trigger: TAGGAATTTGTCTCCTGGAGGGGAGAAAATAAACCACCAAATACTACGGAGGAAATGATGTTGGATAAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| 3UTR TCA 72 bp | AAAAATCTCATGCCAGGTTTAATTATACCACAACTGTaGGTTCACACAAACATTTGCAGAGAGGGCTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KNLMPGLIIPQL*VHTNICREGWR Trigger: TCTCCAGCCCTCTCTGCAAATGTTTGTGTGAACTCACAGTTGTGGTATAATTAAACCTGGCATGAGATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR TCA 90 bp | GTGGGGAGGGGCATGGGATTGAACTCAGTGGCGGAGCACCTGCCTAACAGGCACAGACGGCTGCCACTGTaGTGGCCAACGGGACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGRGMGLNSVAEHLPNRHRRLPL*WPTGHP Trigger: GGGGTGTCCCGTTGGCCATCACAGTGGCAGCCGTCT...GTGCCTGTTAGGCAGGTGCTCCGCCACTGAGTTCAATCCCATGCCCCTCCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR CCA 90 bp | GAGCAGTCAGTGCTCTTAGCCGCTGAGCCATCTCTCCAGCCTGAGAACCCTGTTGCCACAGGGCGTGCGTaGCCACCAGGAGGCCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQSVLLAAEPSLQPENPVATGRA*PPGGPS Trigger: GCTCGGGCCTCCTGGTGGCCACGCACGCCCTGTGGC...AACAGGGTTCTCAGGCTGGAGAGATGGCTCAGCGGCTAAGAGCACTGACTGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR CCA 90 bp | CATGCTTGGTCTCCTAATCCTGAAGCAGGAACCAGGAAGGCAGCGCCAGTACGGGCCCCCGGAGGGCTCTaGGTGGAGGGCCGAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: HAWSPNPEAGTRKAAPVRAPGGL*VEGRGQ Trigger: CTGTCCTCGGCCCTCCACCCAGAGCCCTCCGGGGGC...CCGTACTGGCGCTGCCTTCCTGGTTCCTGCTTCAGGATTAGGAGACCAAGCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR TCA 90 bp | GTGGGGAGGGGCATGGGATTGAACTCAGTGGCGGAGCACCTGCCTAACAGGCACCCTCAGCCTCCAGGTTaGTCCAGCACCAGCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VGRGMGLNSVAEHLPNRHPQPPG*SSTSPQ Trigger: CTGTGGGCTGGTGCTGGATCAACCTGGAGGCTGAGG...GTGCCTGTTAGGCAGGTGCTCCGCCACTGAGTTCAATCCCATGCCCCTCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR GCA 90 bp | GTGGGGAGGGGCATGGGATTGAACTCAGTGGCGGAGCACCTGCCTAACAGGCACGGACAAAGCGCACGGTaGTCCAGACGCGGAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGRGMGLNSVAEHLPNRHGQSAR*SRRGGR Trigger: TCTGCCTCCGCGTCTGGAGCACCGTGCGCTTTGTCC...GTGCCTGTTAGGCAGGTGCTCCGCCACTGAGTTCAATCCCATGCCCCTCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR GCA 90 bp | AAGCCAAGGAGCTTTCTTAGACTCCCAAAAGGGAACCCACCTCTTGTAGAGTTTTCAGGCCACAGGGCGTaGGTGGCCACCAGGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KPRSFLRLPKGNPPLVEFSGHRA*VATRRP Trigger: GGGCCTCCTGGTGGCCACGCACGCCCTGTGGCCTGA...AAACTCTACAAGAGGTGGGTTCCCTTTTGGGAGTCTAAGAAAGCTCCTTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR CCA 90 bp | AAGCCAAGGAGCTTTCTTAGACTCCCAAAAGGGAACCCACCTCTTGTAGAGTTTCCGGAGGGCTCTGGGTaGAGGGCCGAGGACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPRSFLRLPKGNPPLVEFPEGSG*RAEDSS Trigger: GCTGCTGTCCTCGGCCCTCCACCCAGAGCCCTCCGG...AAACTCTACAAGAGGTGGGTTCCCTTTTGGGAGTCTAAGAAAGCTCCTTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR CCA 90 bp | ACACAAACAAACCCCACTGAACCAGGACATGAGTGTGCAAGGAACACACTGCCTATAGGTAGAGGGCGATaGCCACCGTCCAGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQTNPTEPGHECARNTLPIGRGR*PPSRRR Trigger: CCTTCTTCTGGACGGTGGCCATCGCCCTCTACCTAT...AGGCAGTGTGTTCCTTGCACACTCATGTCCTGGTTCAGTGGGGTTTGTTTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR TCA 90 bp | AAGCCAAGGAGCTTTCTTAGACTCCCAAAAGGGAACCCACCTCTTGTAGAGTTTCCCCAGCTGATGAGGTaGAAAGCCCAGATTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPRSFLRLPKGNPPLVEFPQLMR*KAQIRW Trigger: CCACCTAATCTGGGCTTTTCACCTCATCAGCTGGGG...AAACTCTACAAGAGGTGGGTTCCCTTTTGGGAGTCTAAGAAAGCTCCTTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR TCA 90 bp | AAGCCAAGGAGCTTTCTTAGACTCCCAAAAGGGAACCCACCTCTTGTAGAGTTTTACAGAGGACGAACATaGTGCAGTTGGCCCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPRSFLRLPKGNPPLVEFYRGRT*CSWPLP Trigger: AGGGAGGGGCCAACTGCATCATGTTCGTCCTCTGTA...AAACTCTACAAGAGGTGGGTTCCCTTTTGGGAGTCTAAGAAAGCTCCTTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| 3UTR CAA 72 bp | CAGAAAGTCAAAGGCAGGAAGCAGCTGGCAACGGATTaGCAGAACAAGATTCACAAAGTGTACCAGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QKVKGRKQLATD*QNKIHKVYQAV Trigger: CACCGCCTGGTACACTTTGTGAATCTTGTTCTGCAAATCCGTTGCCAGCTGCTTCCTGCCTTTGACTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| 3UTR CAA 72 bp | ACAAATGGTTGTGAGCCACCATGTGGTTGCTGGAATTaGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TNGCEPPCGCWN*NSGPSEEQSVL Trigger: GAGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATTCCAGCAACCACATGGTGGCTCACAACCATTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR GCA 90 bp | AAGCCAAGGAGCTTTCTTAGACTCCCAAAAGGGAACCCACCTCTTGTAGAGTTTTGCGCCCTGTTGATGTaGTTTCTGACCAAAAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KPRSFLRLPKGNPPLVEFCALLM*FLTKRY Trigger: GTACCTTTTGGTCAGAAAGCACATCAACAGGGCGCA...AAACTCTACAAGAGGTGGGTTCCCTTTTGGGAGTCTAAGAAAGCTCCTTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS CCA 90 bp | ACCAACTTCTTATCTGCCGTGGAAGTGGAGGAGCCTCGCTGCAGCTaGCGCCCCTCGCAGATGGGCCGGTACTCCGAGAGCGCCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TNFLSAVEVEEPRCS*RPSQMGRYSESAWC Trigger: GCACCAGGCGCTCTCGGAGTACCGGCCCATCTGCGAGGGGCGCCAGCTGCAGCGAGGCTCCTCCACTTCCACGGCAGATAAGAAGTTGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS GCA 90 bp | ATGAGGACCAACTTCTTATCTGCCGTGGAAGTGGAGGAGCCTCGCTaGAGCTGGCGCCCCTCGCAGATGGGCCGGTACTCCGAGAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: MRTNFLSAVEVEEPR*SWRPSQMGRYSESA Trigger: GGCGCTCTCGGAGTACCGGCCCATCTGCGAGGGGCGCCAGCTGCAGCGAGGCTCCTCCACTTCCACGGCAGATAAGAAGTTGGTCCTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| CDS TCA 90 bp | ACGGCTGCCACTGTGATGGCCAACGGGACACCCCAGCTGATGAGGTaGAAAGCCCAGATTAGGTGGTCCGTGGAGGGCCCGCGCGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TAATVMANGTPQLMR*KAQIRWSVEGPRVV Trigger: AACTACGCGCGGGCCCTCCACGGACCACCTAATCTGGGCTTTTCACCTCATCAGCTGGGGTGTCCCGTTGGCCATCACAGTGGCAGCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| CDS GCA 90 bp | AGCTGGCGCCCCTCGCAGATGGGCCGGTACTCCGAGAGCGCCTGGTaGGCCCTGTTGATGTGCTTTCTGACCAAAAGGTACAGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SWRPSQMGRYSESAW*ALLMCFLTKRYSRG Trigger: ACCTCTGCTGTACCTTTTGGTCAGAAAGCACATCAACAGGGCGCACCAGGCGCTCTCGGAGTACCGGCCCATCTGCGAGGGGCGCCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| CDS TCA 90 bp | TCCCGGTCAGTAGCATCCACAGGACACGGTCCTCAGCCTCCAGGTTaGTCCAGCACCAGCCCACAGACACATCCGAGGCATCATAGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: SRSVASTGHGPQPPG*SSTSPQTHPRHHSL Trigger: TAGGCTATGATGCCTCGGATGTGTCTGTGGGCTGGTGCTGGATCAACCTGGAGGCTGAGGACCGTGTCCTGTGGATGCTACTGACCGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| CDS CCA 90 bp | ACTGCCCGGGTACAGAGGACGAACATGATGCAGTTGGCCCCTCCCTaGAAGGTGTTTCCAATGCCATGCAGAACAACCAGCACGGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TARVQRTNMMQLAPP*KVFPMPCRTTSTGV Trigger: GACACCCGTGCTGGTTGTTCTGCATGGCATTGGAAACACCTTCCAGGGAGGGGCCAACTGCATCATGTTCGTCCTCTGTACCCGGGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| CDS-3UTR CAA 90 bp | CTCCCTCTCTCTCTCTCTGCCTCAGAAAGTCAAAGGCAGGAAGCAGCTGGCAACTCCTCAGCCTCCAGGTaGATCCAGCACCAGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LPLSLSASESQRQEAAGNSSASR*IQHQPT Trigger: TGTGGGCTGGTGCTGGATCAACCTGGAGGCTGAGGA...GTTGCCAGCTGCTTCCTGCCTTTGACTTTCTGAGGCAGAGAGAGAGAGAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS TCA 90 bp | GAGAAAAGAGCCTTGTGCGGACTGCCCGGGTACAGAGGACGAACATaGTGCAGTTGGCCCCTCCCTGGAAGGTGTTTCCAATGCCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: EKRALCGLPGYRGRT*CSWPLPGRCFQCHA Trigger: TGCATGGCATTGGAAACACCTTCCAGGGAGGGGCCAACTGCATCATGTTCGTCCTCTGTACCCGGGCAGTCCGCACAAGGCTCTTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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| CDS GCA 90 bp | AACATGATGCAGTTGGCCCCTCCCTGGAAGGTGTTTCCAATGCCATaGAGAACAACCAGCACGGGTGTCTGTACAGCCGGGGAACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: NMMQLAPPWKVFPMP*RTTSTGVCTAGEPQ Trigger: CTGTGGTTCCCCGGCTGTACAGACACCCGTGCTGGTTGTTCTGCATGGCATTGGAAACACCTTCCAGGGAGGGGCCAACTGCATCATGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR CAA 90 bp | GAGCAGTCAGTGCTCTTAGCCGCTGAGCCATCTCTCCAGCCTGAGAACCCTGTTAAAGAGAAAAGAGCCTaGTGCGGACTGCCCGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: EQSVLLAAEPSLQPENPVKEKRA*CGLPGY Trigger: GTACCCGGGCAGTCCGCACAAGGCTCTTTTCTCTTT...AACAGGGTTCTCAGGCTGGAGAGATGGCTCAGCGGCTAAGAGCACTGACTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR CAA 90 bp | GAGCAGTCAGTGCTCTTAGCCGCTGAGCCATCTCTCCAGCCTGAGAACCCTGTTAAGAAGGAGCTGGTGTaGGCGAAAGTAGAGAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: EQSVLLAAEPSLQPENPVKKELV*AKVERA Trigger: CGCTCTCTCTACTTTCGCCAACACCAGCTCCTTCTT...AACAGGGTTCTCAGGCTGGAGAGATGGCTCAGCGGCTAAGAGCACTGACTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS-3UTR CAA 90 bp | TGGCATAGGCCTGTAATCCCAGAAACAGTAAAACTGCTTAAGGCCTGCCTGGACACGAACATGATGCAGTaGGCCCCTCCCTGGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WHRPVIPETVKLLKACLDTNMMQ*APPWKV Trigger: CACCTTCCAGGGAGGGGCCAACTGCATCATGTTCGT...GTCCAGGCAGGCCTTAAGCAGTTTTACTGTTTCTGGGATTACAGGCCTATGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS CCA 72 bp | TGGAGGAGCCTCGCTGCAGCTGGCGCCCCTCGCAGATaGGCCGGTACTCCGAGAGCGCCTGGTGCGCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: WRSLAAAGAPRR*AGTPRAPGAPC Trigger: ACAGGGCGCACCAGGCGCTCTCGGAGTACCGGCCCATCTGCGAGGGGCGCCAGCTGCAGCGAGGCTCCTCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS TCA 72 bp | ACTGTGATGGCCAACGGGACACCCCAGCTGATGAGGTaGAAAGCCCAGATTAGGTGGTCCGTGGAGGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TVMANGTPQLMR*KAQIRWSVEGP Trigger: CGGGCCCTCCACGGACCACCTAATCTGGGCTTTTCACCTCATCAGCTGGGGTGTCCCGTTGGCCATCACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS TCA 72 bp | GTAGCATCCACAGGACACGGTCCTCAGCCTCCAGGTTaGTCCAGCACCAGCCCACAGACACATCCGAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VASTGHGPQPPG*SSTSPQTHPRH Trigger: ATGCCTCGGATGTGTCTGTGGGCTGGTGCTGGATCAACCTGGAGGCTGAGGACCGTGTCCTGTGGATGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS TCA 72 bp | GCCTTGTGCGGACTGCCCGGGTACAGAGGACGAACATaGTGCAGTTGGCCCCTCCCTGGAAGGTGTTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: ALCGLPGYRGRT*CSWPLPGRCFQ Trigger: TTGGAAACACCTTCCAGGGAGGGGCCAACTGCATCATGTTCGTCCTCTGTACCCGGGCAGTCCGCACAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS CAA 90 bp | AGCCTTGTGCGGACTGCCCGGGTACAGAGGACGAACATGATGCAGTaGGCCCCTCCCTGGAAGGTGTTTCCAATGCCATGCAGAACAACC | + |
|
Preference number: 6 (lower is better) Translates to: SLVRTARVQRTNMMQ*APPWKVFPMPCRTT Trigger: GGTTGTTCTGCATGGCATTGGAAACACCTTCCAGGGAGGGGCCAACTGCATCATGTTCGTCCTCTGTACCCGGGCAGTCCGCACAAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS TCA 72 bp | AAGGAGCTGGTGTTGGCGAAAGTAGAGAGAGCGCCCTaGAGGACGCAATCCCACGAAGTGCCCGCAAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KELVLAKVERAP*RTQSHEVPAKS Trigger: GGACTTTGCGGGCACTTCGTGGGATTGCGTCCTTCAGGGCGCTCTCTCTACTTTCGCCAACACCAGCTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
||
| CDS CCA 72 bp | GTACAGAGGACGAACATGATGCAGTTGGCCCCTCCCTaGAAGGTGTTTCCAATGCCATGCAGAACAACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VQRTNMMQLAPP*KVFPMPCRTTS Trigger: GCTGGTTGTTCTGCATGGCATTGGAAACACCTTCCAGGGAGGGGCCAACTGCATCATGTTCGTCCTCTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094451.4 |
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