Pregenerated sensors for GPR15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047293Ensembl transcript IDs: ENSMUST00000089318.5
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCCCCTGGACAGAAGAGTaGGCAACCCCAGGACGCATG | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFPWTEE*ATPGRM Trigger: CATGCGTCCTGGGGTTGCCCACTCTTCTGTCCAGGG...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR CCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCGCCCAGTCACATTCATaGCCAGCTGCAAAGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFAQSHS*PAAKPR Trigger: CCGAGGCTTTGCAGCTGGCCATGAATGTGACTGGGC...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR TCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCTGCAAAGCCTCGGAGTaGAAAAGGCCTTCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFCKASE*KRPSGW Trigger: CCAGCCAGAAGGCCTTTTTCACTCCGAGGCTTTGCA...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR TCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCTGCCTTCAATGTGAGTaGGCTCCCTGGACAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFCLQCE*APWTEE Trigger: CTCTTCTGTCCAGGGAGCTCACTCACATTGAAGGCA...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR TCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCCACACAGCCTCCTTGTaGTGCAACAGTAGCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFHTASL*CNSSRS Trigger: TGACCTGCTACTGTTGCATCACAAGGAGGCTGTGTG...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR TCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCAGAGCCTTAGTGAGGTaGCTGTCCGATGTCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFRALVR*LSDVSV Trigger: CACTGAGACATCGGACAGTCACCTCACTAAGGCTCT...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR GCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCCATAGGAGCTGCCTTTaGACAGGAAAGAGCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFHRSCL*TGKSQS Trigger: GGACTGGCTCTTTCCTGTGCAAAGGCAGCTCCTATG...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR GCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCCCGATGTCTCAGTGCTaGTCCCAAAGTTGTGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFPMSQC*SQSCGS Trigger: AGACCCACAACTTTGGGAGCAGCACTGAGACATCGG...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR CCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCCTGCTCCCAAAGTTGTaGGTCTTCAGACAAGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFLLPKL*VFRQGH Trigger: GTGCCCTTGTCTGAAGACCCACAACTTTGGGAGCAG...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR CCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCACAGACAACGTACAATaGCCCGGCGGATATAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFTDNVQ*PGGYSC Trigger: ACAGCTATATCCGCCGGGCCATTGTACGTTGTCTGT...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR TCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCCCATGCTCATGCATGTaGGCAAGAAGACACTACAGT | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFPCSCM*ARRHYS Trigger: ACTGTAGTGTCTTCTTGCTCACATGCATGAGCATGG...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR GCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCAGATCACATAGGAGCTaGCTTTGCACAGGAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFRSHRS*LCTGKS Trigger: GCTCTTTCCTGTGCAAAGGCAGCTCCTATGTGATCT...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR GCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCCGTGGGTTTCTTCTCTaGACAGTATGGTTTGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFRGFLL*TVWFAF Trigger: GAAGGCAAACCATACTGTGCAGAGAAGAAACCCACG...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR CCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCAAAAGGCCTTCTGGCTaGAACCCTGAAACAATGGCT | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFKRPSG*NPETMA Trigger: AGCCATTGTTTCAGGGTTCCAGCCAGAAGGCCTTTT...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR CCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCCAGGAAAGGAGGATCTaGGCTTGTGTAGTCATAGTA | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFQERRI*ACVVIV Trigger: TACTATGACTACACAAGCCCAGATCCTCCTTTCCTG...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR GCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCCCGGATGAAATCCTCTaGATGAATGAAGTTGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFPDEIL*MNEVGK Trigger: CTTTCCAACTTCATTCATGCAGAGGATTTCATCCGG...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR CCA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCTCAGTTTTAAGGACGTaGGTTTCTTCTCTGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: LTNPSFQRVPTELDMSQFSVLRT*VSSLHS Trigger: ACTGTGCAGAGAAGAAACCCACGTCCTTAAAACTGA...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS TCA 90 bp | GTGAGTGAGCTCCCTGGACAGAAGAGTGGGCAACCCCAGGACGCATaGGATGATCCAGACGACGGCACACACTGCATATGCAGAGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: VSELPGQKSGQPQDA*DDPDDGTHCICRAS Trigger: AGAAGCTCTGCATATGCAGTGTGTGCCGTCGTCTGGATCATCTCATGCGTCCTGGGGTTGCCCACTCTTCTGTCCAGGGAGCTCACTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS TCA 90 bp | GCCAAGGGCCCAGTCACATTCATGGCCAGCTGCAAAGCCTCGGAGTaGAAAAGGCCTTCTGGCTGGAACCCTGAAACAATGGCTAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: AKGPVTFMASCKASE*KRPSGWNPETMARS Trigger: GCTCCTAGCCATTGTTTCAGGGTTCCAGCCAGAAGGCCTTTTTCACTCCGAGGCTTTGCAGCTGGCCATGAATGTGACTGGGCCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS TCA 90 bp | ACGTGGGTTTCTTCTCTGCACAGTATGGTTTGCCTTCAATGTGAGTaGGCTCCCTGGACAGAAGAGTGGGCAACCCCAGGACGCATGAGA | + |
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Preference number: 5 (lower is better) Translates to: TWVSSLHSMVCLQCE*APWTEEWATPGRMR Trigger: TCTCATGCGTCCTGGGGTTGCCCACTCTTCTGTCCAGGGAGCTCACTCACATTGAAGGCAAACCATACTGTGCAGAGAAGAAACCCACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS TCA 90 bp | AAGGACGTGGGTTTCTTCTCTGCACAGTATGGTTTGCCTTCAATGTaGGTGAGCTCCCTGGACAGAAGAGTGGGCAACCCCAGGACGCAT | + |
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Preference number: 5 (lower is better) Translates to: KDVGFFSAQYGLPSM*VSSLDRRVGNPRTH Trigger: ATGCGTCCTGGGGTTGCCCACTCTTCTGTCCAGGGAGCTCACTCACATTGAAGGCAAACCATACTGTGCAGAGAAGAAACCCACGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR CAA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCGTGCTGCTCCCAAAGTaGTGGGTCTTCAGACAAGGG | + |
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Preference number: 5 (lower is better) Translates to: LTNPSFQRVPTELDMSQFVLLPK*WVFRQG Trigger: CCCTTGTCTGAAGACCCACAACTTTGGGAGCAGCAC...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS TCA 90 bp | TGTTATGCTTTCCCGACTGCTGGTAATGAGCACACAGCCTCCTTGTaGTGCAACAGTAGCAGGTCACAATGCTCAGGAGGGGGACGAAAA | + |
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Preference number: 5 (lower is better) Translates to: CYAFPTAGNEHTASL*CNSSRSQCSGGGRK Trigger: TTTTCGTCCCCCTCCTGAGCATTGTGACCTGCTACTGTTGCATCACAAGGAGGCTGTGTGCTCATTACCAGCAGTCGGGAAAGCATAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS GCA 90 bp | AGACACTACAGTGCATGTTCACGGAGATCACATAGGAGCTGCCTTTaGACAGGAAAGAGCCAGTCCTCCATAGTCCTAGAGAGGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: RHYSACSRRSHRSCL*TGKSQSSIVLERLP Trigger: AGGAAGCCTCTCTAGGACTATGGAGGACTGGCTCTTTCCTGTGCAAAGGCAGCTCCTATGTGATCTCCGTGAACATGCACTGTAGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS GCA 90 bp | GCAAGAAGACACTACAGTGCATGTTCACGGAGATCACATAGGAGCTaGCTTTGCACAGGAAAGAGCCAGTCCTCCATAGTCCTAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: ARRHYSACSRRSHRS*LCTGKSQSSIVLER Trigger: CCTCTCTAGGACTATGGAGGACTGGCTCTTTCCTGTGCAAAGGCAGCTCCTATGTGATCTCCGTGAACATGCACTGTAGTGTCTTCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR CAA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCTCGATCAATCTTCGGTaGCCGCGTTTGAAATGCAGA | + |
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Preference number: 5 (lower is better) Translates to: LTNPSFQRVPTELDMSQFSINLR*PRLKCR Trigger: TCTGCATTTCAAACGCGGCAACCGAAGATTGATCGA...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR CAA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCTCAGAGGCAGCCAGGTaGATGATAAAGATGTCGATC | + |
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Preference number: 5 (lower is better) Translates to: LTNPSFQRVPTELDMSQFSEAAR*MIKMSI Trigger: GATCGACATCTTTATCATCAACCTGGCTGCCTCTGA...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS-3UTR CAA 90 bp | CTGACAAACCCCAGCTTCCAAAGAGTGCCAACAGAGCTTGACATGTCACAGTTCGACTTCTTTAGTTTCTaGTTATGCTTTCCCGACTGC | + |
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Preference number: 5 (lower is better) Translates to: LTNPSFQRVPTELDMSQFDFFSF*LCFPDC Trigger: GCAGTCGGGAAAGCATAACAAGAAACTAAAGAAGTC...GAACTGTGACATGTCAAGCTCTGTTGGCACTCTTTGGAAGCTGGGGTTTGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS GCA 90 bp | TTGATGATAAAGATGTCGATCAATCTTCGGTTGCCGCGTTTGAAATaGAGAGCTATCATGAGGATGAAATTCCCCACCACTCCAGTCAAG | + |
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Preference number: 5 (lower is better) Translates to: LMIKMSINLRLPRLK*RAIMRMKFPTTPVK Trigger: CTTGACTGGAGTGGTGGGGAATTTCATCCTCATGATAGCTCTGCATTTCAAACGCGGCAACCGAAGATTGATCGACATCTTTATCATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS TCA 72 bp | CTCCCTGGACAGAAGAGTGGGCAACCCCAGGACGCATaGGATGATCCAGACGACGGCACACACTGCATATGC | + |
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Preference number: 6 (lower is better) Translates to: LPGQKSGQPQDA*DDPDDGTHCIC Trigger: GCATATGCAGTGTGTGCCGTCGTCTGGATCATCTCATGCGTCCTGGGGTTGCCCACTCTTCTGTCCAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS TCA 72 bp | TGGACAGAAGAGTGGGCAACCCCAGGACGCATGAGATaGTCCAGACGACGGCACACACTGCATATGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: WTEEWATPGRMR*SRRRHTLHMQS Trigger: GCTCTGCATATGCAGTGTGTGCCGTCGTCTGGATCATCTCATGCGTCCTGGGGTTGCCCACTCTTCTGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS CCA 72 bp | AGCTGCTGGCAAAGGCCAAGGGCCCAGTCACATTCATaGCCAGCTGCAAAGCCTCGGAGTGAAAAAGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: SCWQRPRAQSHS*PAAKPRSEKGL Trigger: AAGGCCTTTTTCACTCCGAGGCTTTGCAGCTGGCCATGAATGTGACTGGGCCCTTGGCCTTTGCCAGCAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS TCA 72 bp | TTCCCGACTGCTGGTAATGAGCACACAGCCTCCTTGTaGTGCAACAGTAGCAGGTCACAATGCTCAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: FPTAGNEHTASL*CNSSRSQCSGG Trigger: CCCTCCTGAGCATTGTGACCTGCTACTGTTGCATCACAAGGAGGCTGTGTGCTCATTACCAGCAGTCGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS TCA 72 bp | TCTTCTCTGCACAGTATGGTTTGCCTTCAATGTGAGTaGGCTCCCTGGACAGAAGAGTGGGCAACCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSLHSMVCLQCE*APWTEEWATPG Trigger: TCCTGGGGTTGCCCACTCTTCTGTCCAGGGAGCTCACTCACATTGAAGGCAAACCATACTGTGCAGAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS TCA 72 bp | GGTTTCTTCTCTGCACAGTATGGTTTGCCTTCAATGTaGGTGAGCTCCCTGGACAGAAGAGTGGGCAACCCC | + |
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Preference number: 6 (lower is better) Translates to: GFFSAQYGLPSM*VSSLDRRVGNP Trigger: GGGGTTGCCCACTCTTCTGTCCAGGGAGCTCACTCACATTGAAGGCAAACCATACTGTGCAGAGAAGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS TCA 72 bp | CCAGTCACATTCATGGCCAGCTGCAAAGCCTCGGAGTaGAAAAGGCCTTCTGGCTGGAACCCTGAAACAATG | + |
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Preference number: 6 (lower is better) Translates to: PVTFMASCKASE*KRPSGWNPETM Trigger: CATTGTTTCAGGGTTCCAGCCAGAAGGCCTTTTTCACTCCGAGGCTTTGCAGCTGGCCATGAATGTGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS GCA 72 bp | CACTACAGTGCATGTTCACGGAGATCACATAGGAGCTaGCTTTGCACAGGAAAGAGCCAGTCCTCCATAGTC | + |
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Preference number: 6 (lower is better) Translates to: HYSACSRRSHRS*LCTGKSQSSIV Trigger: GACTATGGAGGACTGGCTCTTTCCTGTGCAAAGGCAGCTCCTATGTGATCTCCGTGAACATGCACTGTAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS CCA 72 bp | TCAAGGCTACCAGGCCCCACATCAGTTTTAAGGACGTaGGTTTCTTCTCTGCACAGTATGGTTTGCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: SRLPGPTSVLRT*VSSLHSMVCLQ Trigger: TTGAAGGCAAACCATACTGTGCAGAGAAGAAACCCACGTCCTTAAAACTGATGTGGGGCCTGGTAGCCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS CCA 72 bp | TGTGGGTCTTCAGACAAGGGCACAGACAACGTACAATaGCCCGGCGGATATAGCTGTCAAAGACATAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: CGSSDKGTDNVQ*PGGYSCQRHSK Trigger: TTTACTATGTCTTTGACAGCTATATCCGCCGGGCCATTGTACGTTGTCTGTGCCCTTGTCTGAAGACCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS CAA 90 bp | GCCAGGTTGATGATAAAGATGTCGATCAATCTTCGGTTGCCGCGTTaGAAATGCAGAGCTATCATGAGGATGAAATTCCCCACCACTCCA | + |
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Preference number: 6 (lower is better) Translates to: ARLMIKMSINLRLPR*KCRAIMRMKFPTTP Trigger: TGGAGTGGTGGGGAATTTCATCCTCATGATAGCTCTGCATTTCAAACGCGGCAACCGAAGATTGATCGACATCTTTATCATCAACCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS CAA 90 bp | TCAGAGGCAGCCAGGTTGATGATAAAGATGTCGATCAATCTTCGGTaGCCGCGTTTGAAATGCAGAGCTATCATGAGGATGAAATTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SEAARLMIKMSINLR*PRLKCRAIMRMKFP Trigger: GGGGAATTTCATCCTCATGATAGCTCTGCATTTCAAACGCGGCAACCGAAGATTGATCGACATCTTTATCATCAACCTGGCTGCCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS GCA 72 bp | AAGATGTCGATCAATCTTCGGTTGCCGCGTTTGAAATaGAGAGCTATCATGAGGATGAAATTCCCCACCACT | + |
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Preference number: 6 (lower is better) Translates to: KMSINLRLPRLK*RAIMRMKFPTT Trigger: AGTGGTGGGGAATTTCATCCTCATGATAGCTCTGCATTTCAAACGCGGCAACCGAAGATTGATCGACATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS CAA 72 bp | GCCAGGTTGATGATAAAGATGTCGATCAATCTTCGGTaGCCGCGTTTGAAATGCAGAGCTATCATGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: ARLMIKMSINLR*PRLKCRAIMRM Trigger: CATCCTCATGATAGCTCTGCATTTCAAACGCGGCAACCGAAGATTGATCGACATCTTTATCATCAACCTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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| CDS CAA 72 bp | ATGATAAAGATGTCGATCAATCTTCGGTTGCCGCGTTaGAAATGCAGAGCTATCATGAGGATGAAATTCCCC | + |
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Preference number: 6 (lower is better) Translates to: MIKMSINLRLPR*KCRAIMRMKFP Trigger: GGGGAATTTCATCCTCATGATAGCTCTGCATTTCAAACGCGGCAACCGAAGATTGATCGACATCTTTATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089318.5 |
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