Pregenerated sensors for GPR146 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044197Ensembl transcript IDs: ENSMUST00000051293.8, ENSMUST00000053120.5, ENSMUST00000100514.3, ENSMUST00000138631.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGAGGCCTGGATCCAGGCACCTGTGGGAGGTGAGCCTCCTCATGTaGCACCCACAGCTGTGTGAAACTGGCCAAGCAGGGCCCTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: VRPGSRHLWEVSLLM*HPQLCETGQAGPFP Trigger: GGGAAAGGGCCCTGCTTGGCCAGTTTCACACAGCTGTGGGTGGCACATGAGGAGGCTCACCTCCCACAGGTGCCTGGATCCAGGCCTCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR TCA 90 bp | GCACCTGTGGGAGGTGAGCCTCCTCATGTGCCACCCACAGCTGTGTaGAACTGGCCAAGCAGGGCCCTTTCCCTGATGCCAGTCCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: APVGGEPPHVPPTAV*NWPSRALSLMPVPG Trigger: ACCAGGGACTGGCATCAGGGAAAGGGCCCTGCTTGGCCAGTTTCACACAGCTGTGGGTGGCACATGAGGAGGCTCACCTCCCACAGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CCA 90 bp | GCATTGCTCCAGGGGTCTCTACAGCAAAGGGGTCAGCACTGCAGATaGCCACTACCCTGGCCATGTGCGGCTCCACAAGGAAGACCCAGG | + |
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Preference number: 1 (lower is better) Translates to: ALLQGSLQQRGQHCR*PLPWPCAAPQGRPR Trigger: CCTGGGTCTTCCTTGTGGAGCCGCACATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGTAGAGACCCCTGGAGCAATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR TCA 90 bp | TCCCAGACAGCCAGGACCAGCTGTGGGGCCATGCAAGAAGGCCACTaGATGTGGGTCACACACCCGCCTTCTGTAGAGACAGGGGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: SQTARTSCGAMQEGH*MWVTHPPSVETGVR Trigger: TCTCACCCCTGTCTCTACAGAAGGCGGGTGTGTGACCCACATTCAGTGGCCTTCTTGCATGGCCCCACAGCTGGTCCTGGCTGTCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CCA 90 bp | GTTACTGACTCAGAGCAGCAGTTCCCAGACAGCCAGGACCAGCTGTaGGGCCATGCAAGAAGGCCACTGAATGTGGGTCACACACCCGCC | + |
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Preference number: 1 (lower is better) Translates to: VTDSEQQFPDSQDQL*GHARRPLNVGHTPA Trigger: GGCGGGTGTGTGACCCACATTCAGTGGCCTTCTTGCATGGCCCCACAGCTGGTCCTGGCTGTCTGGGAACTGCTGCTCTGAGTCAGTAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR GCA 90 bp | GAGAGTGCATTGCTCCAGGGGTCTCTACAGCAAAGGGGTCAGCACTaGAGATGGCCACTACCCTGGCCATGTGCGGCTCCACAAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: ESALLQGSLQQRGQH*RWPLPWPCAAPQGR Trigger: TCTTCCTTGTGGAGCCGCACATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGTAGAGACCCCTGGAGCAATGCACTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CCA 90 bp | AAACATGAGGATGGTAAAAGACCCCAGAAGCACGTGGGTGAGGCCTaGATCCAGGCACCTGTGGGAGGTGAGCCTCCTCATGTGCCACCC | + |
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Preference number: 1 (lower is better) Translates to: KHEDGKRPQKHVGEA*IQAPVGGEPPHVPP Trigger: GGGTGGCACATGAGGAGGCTCACCTCCCACAGGTGCCTGGATCCAGGCCTCACCCACGTGCTTCTGGGGTCTTTTACCATCCTCATGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR GCA 90 bp | ACAGCAAAGGGGTCAGCACTGCAGATGGCCACTACCCTGGCCATGTaGGGCTCCACAAGGAAGACCCAGGTAGGCAGTGATTGGCTATAC | + |
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Preference number: 1 (lower is better) Translates to: TAKGSALQMATTLAM*GSTRKTQVGSDWLY Trigger: GTATAGCCAATCACTGCCTACCTGGGTCTTCCTTGTGGAGCCGCACATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR GCA 90 bp | CCAGTGCTCCATAGCTGTCACTGTCAGCAATGGCTGTGTAGCTGCTaGAGGCCTGACAGGCCCACTGTCCTGTCCTCAAGCTCTAACACT | + |
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Preference number: 1 (lower is better) Translates to: PVLHSCHCQQWLCSC*RPDRPTVLSSSSNT Trigger: AGTGTTAGAGCTTGAGGACAGGACAGTGGGCCTGTCAGGCCTGCAGCAGCTACACAGCCATTGCTGACAGTGACAGCTATGGAGCACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CCA 90 bp | GAAATGCCCCGCTGTGCATCTCTGGCTTCAGCGTGTCTCCTGGGCTaGAAGCTCCATGTGCCTGGGGAACAAAGTGCTATGTGTCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: EMPRCASLASACLLG*KLHVPGEQSAMCPV Trigger: AACTGGACACATAGCACTTTGTTCCCCAGGCACATGGAGCTTCCAGCCCAGGAGACACGCTGAAGCCAGAGATGCACAGCGGGGCATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CCA 90 bp | CAAGAGAAATGCCCCGCTGTGCATCTCTGGCTTCAGCGTGTCTCCTaGGCTGGAAGCTCCATGTGCCTGGGGAACAAAGTGCTATGTGTC | + |
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Preference number: 1 (lower is better) Translates to: QEKCPAVHLWLQRVS*AGSSMCLGNKVLCV Trigger: GACACATAGCACTTTGTTCCCCAGGCACATGGAGCTTCCAGCCCAGGAGACACGCTGAAGCCAGAGATGCACAGCGGGGCATTTCTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CCA 90 bp | TGTGTGAAACTGGCCAAGCAGGGCCCTTTCCCTGATGCCAGTCCCTaGTCATCTTGGAGCCGTGGTCTCATACCATCCTGCCTTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: CVKLAKQGPFPDASP*SSWSRGLIPSCLFL Trigger: AAGGAAAAGGCAGGATGGTATGAGACCACGGCTCCAAGATGACCAGGGACTGGCATCAGGGAAAGGGCCCTGCTTGGCCAGTTTCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CCA 90 bp | ACACGTGATGAACAGCATCAGGGACAGCAGATGTCTGAGCACCAGTaGCTGCTGAGCTTGGGTGGTTGTGATGGAAAGGAAAGCTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: TRDEQHQGQQMSEHQ*LLSLGGCDGKESWG Trigger: GCCCCAGCTTTCCTTTCCATCACAACCACCCAAGCTCAGCAGCCACTGGTGCTCAGACATCTGCTGTCCCTGATGCTGTTCATCACGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CCA 90 bp | ACTTTGGGAGGTGCAAGGTGCAGGGCAGAATTGGGAAGCAGACACTaGGGACACGTGATGAACAGCATCAGGGACAGCAGATGTCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: TLGGARCRAELGSRH*GHVMNSIRDSRCLS Trigger: GCTCAGACATCTGCTGTCCCTGATGCTGTTCATCACGTGTCCCCAGTGTCTGCTTCCCAATTCTGCCCTGCACCTTGCACCTCCCAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR TCA 90 bp | ATGAACAGCATCAGGGACAGCAGATGTCTGAGCACCAGTGGCTGCTaGGCTTGGGTGGTTGTGATGGAAAGGAAAGCTGGGGCAAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: MNSIRDSRCLSTSGC*AWVVVMERKAGARR Trigger: CCTTCTTGCCCCAGCTTTCCTTTCCATCACAACCACCCAAGCTCAGCAGCCACTGGTGCTCAGACATCTGCTGTCCCTGATGCTGTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR GCA 90 bp | GACCTTGGTCCCTGGGCTTGCTCTCATAGGAGAATTACCGTGGCCTaGAGGCCAGGTCTAGCTAGAACCTTCATGGTGAGGGTTCTTGTT | + |
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Preference number: 1 (lower is better) Translates to: DLGPWACSHRRITVA*RPGLARTFMVRVLV Trigger: AACAAGAACCCTCACCATGAAGGTTCTAGCTAGACCTGGCCTGCAGGCCACGGTAATTCTCCTATGAGAGCAAGCCCAGGGACCAAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR GCA 90 bp | GTTGAAGCACTGGAAAGATCCTCTCTCAGTAGAGGAGAGGGCCAGTaGTCCATAGCTGTCACTGTCAGCAATGGCTGTGTAGCTGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: VEALERSSLSRGEGQ*SIAVTVSNGCVAAA Trigger: TGCAGCAGCTACACAGCCATTGCTGACAGTGACAGCTATGGAGCACTGGCCCTCTCCTCTACTGAGAGAGGATCTTTCCAGTGCTTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CCA 90 bp | GGAGTAAGTGGTATAAAACGGTCCCCAGGGCAAAGACTGTTAAACTaGGGCGCCAACATCACAAACAGCCCTGCCCACCTGAAGCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: GVSGIKRSPGQRLLN*GANITNSPAHLKPV Trigger: AACAGGCTTCAGGTGGGCAGGGCTGTTTGTGATGTTGGCGCCCCAGTTTAACAGTCTTTGCCCTGGGGACCGTTTTATACCACTTACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CCA 90 bp | CAGCAAGCGTTAAGGTGTTCATTGTGGCTATCAGGGTGGGAAGCCTaGAAGCCATTAGCTTTTCAGAGCCTTCACTCAGCTGTGCACCTG | + |
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Preference number: 1 (lower is better) Translates to: QQALRCSLWLSGWEA*KPLAFQSLHSAVHL Trigger: CAGGTGCACAGCTGAGTGAAGGCTCTGAAAAGCTAATGGCTTCCAGGCTTCCCACCCTGATAGCCACAATGAACACCTTAACGCTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR GCA 90 bp | TTCTTTGTGTGGTTTAGGTTCTTTCCTACTTTGGGAGGTGCAAGGTaGAGGGCAGAATTGGGAAGCAGACACTGGGGACACGTGATGAAC | + |
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Preference number: 1 (lower is better) Translates to: FFVWFRFFPTLGGAR*RAELGSRHWGHVMN Trigger: GTTCATCACGTGTCCCCAGTGTCTGCTTCCCAATTCTGCCCTGCACCTTGCACCTCCCAAAGTAGGAAAGAACCTAAACCACACAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CCA 90 bp | TTGTTTCCTCAGCAAGCGTTAAGGTGTTCATTGTGGCTATCAGGGTaGGAAGCCTGGAAGCCATTAGCTTTTCAGAGCCTTCACTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: LFPQQALRCSLWLSG*EAWKPLAFQSLHSA Trigger: AGCTGAGTGAAGGCTCTGAAAAGCTAATGGCTTCCAGGCTTCCCACCCTGATAGCCACAATGAACACCTTAACGCTTGCTGAGGAAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR GCA 90 bp | ACGTACATAGACATGGGCACGCACACACACACACACACACCCCATTaGAGTAACCTCTTCTTTGTGTGGTTTAGGTTCTTTCCTACTTTG | + |
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Preference number: 1 (lower is better) Translates to: TYIDMGTHTHTHTPH*SNLFFVWFRFFPTL Trigger: CAAAGTAGGAAAGAACCTAAACCACACAAAGAAGAGGTTACTGCAATGGGGTGTGTGTGTGTGTGTGTGCGTGCCCATGTCTATGTACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR TCA 90 bp | TGTCCTCAAGCTCTAACACTGGTATCAGCGACAGCCACATTCCCCTaGAGTGCCTTCTTCTTAATACTAGGTATCTTTCTAACACTTCTA | + |
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Preference number: 1 (lower is better) Translates to: CPQALTLVSATATFP*SAFFLILGIFLTLL Trigger: TAGAAGTGTTAGAAAGATACCTAGTATTAAGAAGAAGGCACTTCAGGGGAATGTGGCTGTCGCTGATACCAGTGTTAGAGCTTGAGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR TCA 90 bp | CAATTTAAAGTCCTCAAAACAAAATTCTACAGCCGTAAGCAACTCTaGAGATGCCTGTCTAACCCAGCCCTTTGGTTTATTCATGAACTG | + |
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Preference number: 1 (lower is better) Translates to: QFKVLKTKFYSRKQL*RCLSNPALWFIHEL Trigger: CAGTTCATGAATAAACCAAAGGGCTGGGTTAGACAGGCATCTTCAGAGTTGCTTACGGCTGTAGAATTTTGTTTTGAGGACTTTAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGAGGCCTGGATCCAGGCACCTGTGGGAGGTGAGCCTCCTCATGTGCCACCCCCCGCTGTGCATCTCTaGCTTCAGCGTGTCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GEAWIQAPVGGEPPHVPPPAVHL*LQRVSW Trigger: CCAGGAGACACGCTGAAGCCAGAGATGCACAGCGGG...GGGTGGCACATGAGGAGGCTCACCTCCCACAGGTGCCTGGATCCAGGCCTCACC 64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGTCTCTACAGCAAAGGGGTCAGCACTGCAGATGGCCACTACCCTGGCCATGGACCCCAGAAGCACGTaGGTGAGGCCTGGATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GVSTAKGSALQMATTLAMDPRST*VRPGSR Trigger: CCTGGATCCAGGCCTCACCCACGTGCTTCTGGGGTC...CATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGTAGAGACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCAAGCAGGGCCCTTTCCCTGATGCCAGTCCCTGGTCATCTTGGAGCCGTCTTCAGCGTGTCTCCTaGGCTGGAAGCTCCATGTGC | + |
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Preference number: 2 (lower is better) Translates to: LAKQGPFPDASPWSSWSRLQRVS*AGSSMC Trigger: GCACATGGAGCTTCCAGCCCAGGAGACACGCTGAAG...ACGGCTCCAAGATGACCAGGGACTGGCATCAGGGAAAGGGCCCTGCTTGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGTCTCTACAGCAAAGGGGTCAGCACTGCAGATGGCCACTACCCTGGCCATGGGATCCAGGCACCTGTaGGAGGTGAGCCTCCTCATG | + |
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Preference number: 2 (lower is better) Translates to: GVSTAKGSALQMATTLAMGSRHL*EVSLLM Trigger: CATGAGGAGGCTCACCTCCCACAGGTGCCTGGATCC...CATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGTAGAGACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR TCA 90 bp | CACCAGTGGCTGCTGAGCTTGGGTGGTTGTGATGGAAAGGAAAGCTGGGGCAAGGCAGGGCCCTTTCCCTaGTGCCAGTCCCTGGTCATC | + |
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Preference number: 2 (lower is better) Translates to: HQWLLSLGGCDGKESWGKAGPFP*CQSLVI Trigger: GATGACCAGGGACTGGCATCAGGGAAAGGGCCCTGC...CTTGCCCCAGCTTTCCTTTCCATCACAACCACCCAAGCTCAGCAGCCACTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGTCTCTACAGCAAAGGGGTCAGCACTGCAGATGGCCACTACCCTGGCCATGCTTCAGCGTGTCTCCTaGGCTGGAAGCTCCATGTGC | + |
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Preference number: 2 (lower is better) Translates to: GVSTAKGSALQMATTLAMLQRVS*AGSSMC Trigger: GCACATGGAGCTTCCAGCCCAGGAGACACGCTGAAG...CATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGTAGAGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR CCA 90 bp | CACCAGTGGCTGCTGAGCTTGGGTGGTTGTGATGGAAAGGAAAGCTGGGGCAAGCCTGATGCCAGTCCCTaGTCATCTTGGAGCCGTGGT | + |
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Preference number: 2 (lower is better) Translates to: HQWLLSLGGCDGKESWGKPDASP*SSWSRG Trigger: ACCACGGCTCCAAGATGACCAGGGACTGGCATCAGG...CTTGCCCCAGCTTTCCTTTCCATCACAACCACCCAAGCTCAGCAGCCACTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR TCA 90 bp | CACCAGTGGCTGCTGAGCTTGGGTGGTTGTGATGGAAAGGAAAGCTGGGGCAAGTATCATGCTTGGGGGTaGCTGGGGTGGAGGGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: HQWLLSLGGCDGKESWGKYHAWG*LGWRVL Trigger: TAGAACCCTCCACCCCAGTCACCCCCAAGCATGATA...CTTGCCCCAGCTTTCCTTTCCATCACAACCACCCAAGCTCAGCAGCCACTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGAGGCCTGGATCCAGGCACCTGTGGGAGGTGAGCCTCCTCATGTGCCACCCTGTATATGCATATGTTaGAGCACTGGAAAGATCCTC | + |
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Preference number: 2 (lower is better) Translates to: GEAWIQAPVGGEPPHVPPCICIC*STGKIL Trigger: GAGGATCTTTCCAGTGCTTCAACATATGCATATACA...GGGTGGCACATGAGGAGGCTCACCTCCCACAGGTGCCTGGATCCAGGCCTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR GCA 90 bp | GGGGTCTCTACAGCAAAGGGGTCAGCACTGCAGATGGCCACTACCCTGGCCATGCCCCAGAGCATAGGTTaGCTTTTGTTTGATGTGACC | + |
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Preference number: 2 (lower is better) Translates to: GVSTAKGSALQMATTLAMPQSIG*LLFDVT Trigger: GGTCACATCAAACAAAAGGCAACCTATGCTCTGGGG...CATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGTAGAGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR TCA 90 bp | CACCAGTGGCTGCTGAGCTTGGGTGGTTGTGATGGAAAGGAAAGCTGGGGCAAGGGTTTATTCATGAACTaGGACCCACAGAGCATGCCC | + |
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Preference number: 2 (lower is better) Translates to: HQWLLSLGGCDGKESWGKGLFMN*DPQSMP Trigger: GGGCATGCTCTGTGGGTCTCAGTTCATGAATAAACC...CTTGCCCCAGCTTTCCTTTCCATCACAACCACCCAAGCTCAGCAGCCACTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR TCA 90 bp | GGGGTCTCTACAGCAAAGGGGTCAGCACTGCAGATGGCCACTACCCTGGCCATGCCTTTGGTTTATTCATaGACTGAGACCCACAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: GVSTAKGSALQMATTLAMPLVYS*TETHRA Trigger: TGCTCTGTGGGTCTCAGTTCATGAATAAACCAAAGG...CATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGTAGAGACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCAAGCAGGGCCCTTTCCCTGATGCCAGTCCCTGGTCATCTTGGAGCCGTTTTTCCTTCTATGCCTaGCTAACCCTCTACCATATC | + |
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Preference number: 2 (lower is better) Translates to: LAKQGPFPDASPWSSWSRFSFYA*LTLYHI Trigger: GATATGGTAGAGGGTTAGCCAGGCATAGAAGGAAAA...ACGGCTCCAAGATGACCAGGGACTGGCATCAGGGAAAGGGCCCTGCTTGGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR CCA 90 bp | CACCAGTGGCTGCTGAGCTTGGGTGGTTGTGATGGAAAGGAAAGCTGGGGCAAGGGTGAGATGGTCACATaGAGAGCTTTAGAACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: HQWLLSLGGCDGKESWGKGEMVT*RALELG Trigger: CCCCAGTTCTAAAGCTCTCCATGTGACCATCTCACC...CTTGCCCCAGCTTTCCTTTCCATCACAACCACCCAAGCTCAGCAGCCACTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CAA 90 bp | GAGGACATGGACCTTGAAGATGTCCCTGGGAGAAAGGCACACACCTaGAGGGAGAAGGTGGGAAGGTTAGTCAGAAGCAGCCTGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: EDMDLEDVPGRKAHT*REKVGRLVRSSLFT Trigger: TGTGAACAGGCTGCTTCTGACTAACCTTCCCACCTTCTCCCTCAAGGTGTGTGCCTTTCTCCCAGGGACATCTTCAAGGTCCATGTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCTCAAGCTCTAACACTGGTATCAGCGACAGCCACATTCCCCTGAAGTGCGCTGGAAGCTCCATGTaGCTGGGGAACAAAGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: LSSSSNTGISDSHIPLKCAGSSM*LGNKVL Trigger: TAGCACTTTGTTCCCCAGGCACATGGAGCTTCCAGC...GCACTTCAGGGGAATGTGGCTGTCGCTGATACCAGTGTTAGAGCTTGAGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR GCA 90 bp | CACCAGTGGCTGCTGAGCTTGGGTGGTTGTGATGGAAAGGAAAGCTGGGGCAAGTGCCTTTTCCTTCTATaGCTGGCTAACCCTCTACCA | + |
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Preference number: 2 (lower is better) Translates to: HQWLLSLGGCDGKESWGKCLFLL*LANPLP Trigger: TGGTAGAGGGTTAGCCAGGCATAGAAGGAAAAGGCA...CTTGCCCCAGCTTTCCTTTCCATCACAACCACCCAAGCTCAGCAGCCACTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CAA 90 bp | TTTAGGTTCTTTCCTACTTTGGGAGGTGCAAGGTGCAGGGCAGAATaGGGAAGCAGACACTGGGGACACGTGATGAACAGCATCAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: FRFFPTLGGARCRAE*GSRHWGHVMNSIRD Trigger: GTCCCTGATGCTGTTCATCACGTGTCCCCAGTGTCTGCTTCCCAATTCTGCCCTGCACCTTGCACCTCCCAAAGTAGGAAAGAACCTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCTCAAGCTCTAACACTGGTATCAGCGACAGCCACATTCCCCTGAAGTGCGAAGCTCCATGTGCCTaGGGAACAAAGTGCTATGTG | + |
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Preference number: 2 (lower is better) Translates to: LSSSSNTGISDSHIPLKCEAPCA*GTKCYV Trigger: CACATAGCACTTTGTTCCCCAGGCACATGGAGCTTC...GCACTTCAGGGGAATGTGGCTGTCGCTGATACCAGTGTTAGAGCTTGAGGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR-3UTR TCA 90 bp | CACCAGTGGCTGCTGAGCTTGGGTGGTTGTGATGGAAAGGAAAGCTGGGGCAAGGATTGGCTATACAATTaGTGGCAGTCACACATTCCT | + |
|
Preference number: 2 (lower is better) Translates to: HQWLLSLGGCDGKESWGKDWLYN*WQSHIP Trigger: AGGAATGTGTGACTGCCATCAATTGTATAGCCAATC...CTTGCCCCAGCTTTCCTTTCCATCACAACCACCCAAGCTCAGCAGCCACTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR TCA 90 bp | TTAAACTCATGTAAGAAAGCATCACTGAGTGACACACACACACATGTACATAGAGGCACCTGTGGGAGGTaGGCCTCCTCATGTGCCACC | + |
|
Preference number: 2 (lower is better) Translates to: LNSCKKASLSDTHTHVHRGTCGR*ASSCAT Trigger: GGTGGCACATGAGGAGGCTCACCTCCCACAGGTGCC...TCTATGTACATGTGTGTGTGTGTCACTCAGTGATGCTTTCTTACATGAGTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR GCA 90 bp | TTAAACTCATGTAAGAAAGCATCACTGAGTGACACACACACACATGTACATAGAGCCTTCACTCAGCTGTaGACCTGGGGCGGGGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: LNSCKKASLSDTHTHVHRAFTQL*TWGGGR Trigger: CCTACCCCCGCCCCAGGTGCACAGCTGAGTGAAGGC...TCTATGTACATGTGTGTGTGTGTCACTCAGTGATGCTTTCTTACATGAGTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR TCA 90 bp | AATTTAAAGTCCTCAAAACAAAATTCTACAGCCGTAAGCAACTCTGAAGATGCCGCAGGGCCCTTTCCCTaGTGCCAGTCCCTGGTCATC | + |
|
Preference number: 2 (lower is better) Translates to: NLKSSKQNSTAVSNSEDAAGPFP*CQSLVI Trigger: GATGACCAGGGACTGGCATCAGGGAAAGGGCCCTGC...GGCATCTTCAGAGTTGCTTACGGCTGTAGAATTTTGTTTTGAGGACTTTAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR GCA 90 bp | AGCCGTCACCGTCCATGGAGATGGAGTTTGCATAGAATAGATAACACTAAAGTTCACACAGGGCACCTCTaGTTTCCACCATGCAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: SRHRPWRWSLHRIDNTKVHTGHL*FPPCSI Trigger: TATGCTGCATGGTGGAAAGCAGAGGTGCCCTGTGTG...AACTTTAGTGTTATCTATTCTATGCAAACTCCATCTCCATGGACGGTGACGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CCA 90 bp | AGCCGTCACCGTCCATGGAGATGGAGTTTGCATAGAATAGATAACACTAAAGTTGAAGCTCCATGTGCCTaGGGAACAAAGTGCTATGTG | + |
|
Preference number: 2 (lower is better) Translates to: SRHRPWRWSLHRIDNTKVEAPCA*GTKCYV Trigger: CACATAGCACTTTGTTCCCCAGGCACATGGAGCTTC...AACTTTAGTGTTATCTATTCTATGCAAACTCCATCTCCATGGACGGTGACGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CCA 90 bp | AGCCGTCACCGTCCATGGAGATGGAGTTTGCATAGAATAGATAACACTAAAGTTGGTGAGATGGTCACATaGAGAGCTTTAGAACTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SRHRPWRWSLHRIDNTKVGEMVT*RALELG Trigger: CCCCAGTTCTAAAGCTCTCCATGTGACCATCTCACC...AACTTTAGTGTTATCTATTCTATGCAAACTCCATCTCCATGGACGGTGACGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CAA 90 bp | TTAAGGCAGATTAACTGGAGCCGTCACCGTCCATGGAGATGGAGTTaGCATAGAATAGATAACACTAAAGTTACTGACTCAGAGCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LRQINWSRHRPWRWS*HRIDNTKVTDSEQQ Trigger: CTGCTGCTCTGAGTCAGTAACTTTAGTGTTATCTATTCTATGCAAACTCCATCTCCATGGACGGTGACGGCTCCAGTTAATCTGCCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CAA 90 bp | GAAGTGTCGACAGCTAAGTTAAGAAGCCTTGGGGAAATGTGTGTCTaGCCTGGAGTCTTAAACTCATGTAAGAAAGCATCACTGAGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: EVSTAKLRSLGEMCV*PGVLNSCKKASLSD Trigger: GTCACTCAGTGATGCTTTCTTACATGAGTTTAAGACTCCAGGCAAGACACACATTTCCCCAAGGCTTCTTAACTTAGCTGTCGACACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR TCA 90 bp | AATTTAAAGTCCTCAAAACAAAATTCTACAGCCGTAAGCAACTCTGAAGATGCCATGCAAGAAGGCCACTaGATGTGGGTCACACACCCG | + |
|
Preference number: 2 (lower is better) Translates to: NLKSSKQNSTAVSNSEDAMQEGH*MWVTHP Trigger: CGGGTGTGTGACCCACATTCAGTGGCCTTCTTGCAT...GGCATCTTCAGAGTTGCTTACGGCTGTAGAATTTTGTTTTGAGGACTTTAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR GCA 90 bp | TTAAACTCATGTAAGAAAGCATCACTGAGTGACACACACACACATGTACATAGAGCTGGAAGCTCCATGTaGCTGGGGAACAAAGTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LNSCKKASLSDTHTHVHRAGSSM*LGNKVL Trigger: TAGCACTTTGTTCCCCAGGCACATGGAGCTTCCAGC...TCTATGTACATGTGTGTGTGTGTCACTCAGTGATGCTTTCTTACATGAGTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR GCA 90 bp | AATTTAAAGTCCTCAAAACAAAATTCTACAGCCGTAAGCAACTCTGAAGATGCCCACACAGGGCACCTCTaGTTTCCACCATGCAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: NLKSSKQNSTAVSNSEDAHTGHL*FPPCSI Trigger: TATGCTGCATGGTGGAAAGCAGAGGTGCCCTGTGTG...GGCATCTTCAGAGTTGCTTACGGCTGTAGAATTTTGTTTTGAGGACTTTAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CCA 90 bp | TTAAACTCATGTAAGAAAGCATCACTGAGTGACACACACACACATGTACATAGATTGTGGCTATCAGGGTaGGAAGCCTGGAAGCCATTA | + |
|
Preference number: 2 (lower is better) Translates to: LNSCKKASLSDTHTHVHRLWLSG*EAWKPL Trigger: TAATGGCTTCCAGGCTTCCCACCCTGATAGCCACAA...TCTATGTACATGTGTGTGTGTGTCACTCAGTGATGCTTTCTTACATGAGTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR GCA 90 bp | TTAAACTCATGTAAGAAAGCATCACTGAGTGACACACACACACATGTACATAGACCCCAGAGCATAGGTTaGCTTTTGTTTGATGTGACC | + |
|
Preference number: 2 (lower is better) Translates to: LNSCKKASLSDTHTHVHRPQSIG*LLFDVT Trigger: GGTCACATCAAACAAAAGGCAACCTATGCTCTGGGG...TCTATGTACATGTGTGTGTGTGTCACTCAGTGATGCTTTCTTACATGAGTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CCA 90 bp | AATTTAAAGTCCTCAAAACAAAATTCTACAGCCGTAAGCAACTCTGAAGATGCCCCGAGAGAATTCGGGTaGTGGGAATTCTTTTCATGC | + |
|
Preference number: 2 (lower is better) Translates to: NLKSSKQNSTAVSNSEDAPREFG*WEFFSC Trigger: GCATGAAAAGAATTCCCACCACCCGAATTCTCTCGG...GGCATCTTCAGAGTTGCTTACGGCTGTAGAATTTTGTTTTGAGGACTTTAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CCA 90 bp | TTAAACTCATGTAAGAAAGCATCACTGAGTGACACACACACACATGTACATAGACTCTGGACCTCTGCCTaGAGTAAGTGGTATAAAACG | + |
|
Preference number: 2 (lower is better) Translates to: LNSCKKASLSDTHTHVHRLWTSA*SKWYKT Trigger: CGTTTTATACCACTTACTCCAGGCAGAGGTCCAGAG...TCTATGTACATGTGTGTGTGTGTCACTCAGTGATGCTTTCTTACATGAGTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CCA 90 bp | TTAAACTCATGTAAGAAAGCATCACTGAGTGACACACACACACATGTACATAGAAGAGAATTCGGGTGGTaGGAATTCTTTTCATGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LNSCKKASLSDTHTHVHRREFGW*EFFSCP Trigger: TGGGCATGAAAAGAATTCCCACCACCCGAATTCTCT...TCTATGTACATGTGTGTGTGTGTCACTCAGTGATGCTTTCTTACATGAGTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CCA 90 bp | AATTTAAAGTCCTCAAAACAAAATTCTACAGCCGTAAGCAACTCTGAAGATGCCAGAGAATTCGGGTGGTaGGAATTCTTTTCATGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: NLKSSKQNSTAVSNSEDAREFGW*EFFSCP Trigger: TGGGCATGAAAAGAATTCCCACCACCCGAATTCTCT...GGCATCTTCAGAGTTGCTTACGGCTGTAGAATTTTGTTTTGAGGACTTTAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CCA 90 bp | AATTTAAAGTCCTCAAAACAAAATTCTACAGCCGTAAGCAACTCTGAAGATGCCTCTAACCCAGCCCTTTaGTTTATTCATGAACTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: NLKSSKQNSTAVSNSEDASNPAL*FIHELR Trigger: TCTCAGTTCATGAATAAACCAAAGGGCTGGGTTAGA...GGCATCTTCAGAGTTGCTTACGGCTGTAGAATTTTGTTTTGAGGACTTTAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR TCA 72 bp | GGAGGTGAGCCTCCTCATGTGCCACCCACAGCTGTGTaGAACTGGCCAAGCAGGGCCCTTTCCCTGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GGEPPHVPPTAV*NWPSRALSLMP Trigger: TGGCATCAGGGAAAGGGCCCTGCTTGGCCAGTTTCACACAGCTGTGGGTGGCACATGAGGAGGCTCACCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR GCA 72 bp | GGGTCAGCACTGCAGATGGCCACTACCCTGGCCATGTaGGGCTCCACAAGGAAGACCCAGGTAGGCAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: GSALQMATTLAM*GSTRKTQVGSD Trigger: ATCACTGCCTACCTGGGTCTTCCTTGTGGAGCCGCACATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR GCA 72 bp | TTGCTCCAGGGGTCTCTACAGCAAAGGGGTCAGCACTaGAGATGGCCACTACCCTGGCCATGTGCGGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLQGSLQQRGQH*RWPLPWPCAAP Trigger: TGGAGCCGCACATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGTAGAGACCCCTGGAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | TGCCCCGCTGTGCATCTCTGGCTTCAGCGTGTCTCCTaGGCTGGAAGCTCCATGTGCCTGGGGAACAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: CPAVHLWLQRVS*AGSSMCLGNKV Trigger: CACTTTGTTCCCCAGGCACATGGAGCTTCCAGCCCAGGAGACACGCTGAAGCCAGAGATGCACAGCGGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | CTGGCCAAGCAGGGCCCTTTCCCTGATGCCAGTCCCTaGTCATCTTGGAGCCGTGGTCTCATACCATCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LAKQGPFPDASP*SSWSRGLIPSC Trigger: GCAGGATGGTATGAGACCACGGCTCCAAGATGACCAGGGACTGGCATCAGGGAAAGGGCCCTGCTTGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | CAGGGGTCTCTACAGCAAAGGGGTCAGCACTGCAGATaGCCACTACCCTGGCCATGTGCGGCTCCACAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QGSLQQRGQHCR*PLPWPCAAPQG Trigger: TCCTTGTGGAGCCGCACATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGTAGAGACCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR TCA 72 bp | CAGCTGTGTGAAACTGGCCAAGCAGGGCCCTTTCCCTaGTGCCAGTCCCTGGTCATCTTGGAGCCGTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: QLCETGQAGPFP*CQSLVILEPWS Trigger: AGACCACGGCTCCAAGATGACCAGGGACTGGCATCAGGGAAAGGGCCCTGCTTGGCCAGTTTCACACAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR TCA 72 bp | GCCAGGACCAGCTGTGGGGCCATGCAAGAAGGCCACTaGATGTGGGTCACACACCCGCCTTCTGTAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: ARTSCGAMQEGH*MWVTHPPSVET Trigger: TGTCTCTACAGAAGGCGGGTGTGTGACCCACATTCAGTGGCCTTCTTGCATGGCCCCACAGCTGGTCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | AGAGGGCCAGTGCTCCATAGCTGTCACTGTCAGCAATaGCTGTGTAGCTGCTGCAGGCCTGACAGGCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: RGPVLHSCHCQQ*LCSCCRPDRPT Trigger: AGTGGGCCTGTCAGGCCTGCAGCAGCTACACAGCCATTGCTGACAGTGACAGCTATGGAGCACTGGCCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | GATGGTAAAAGACCCCAGAAGCACGTGGGTGAGGCCTaGATCCAGGCACCTGTGGGAGGTGAGCCTCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: DGKRPQKHVGEA*IQAPVGGEPPH Trigger: ATGAGGAGGCTCACCTCCCACAGGTGCCTGGATCCAGGCCTCACCCACGTGCTTCTGGGGTCTTTTACCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR GCA 72 bp | CTCCATAGCTGTCACTGTCAGCAATGGCTGTGTAGCTaGTGCAGGCCTGACAGGCCCACTGTCCTGTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LHSCHCQQWLCS*CRPDRPTVLSS Trigger: TGAGGACAGGACAGTGGGCCTGTCAGGCCTGCAGCAGCTACACAGCCATTGCTGACAGTGACAGCTATGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | CGCTGTGCATCTCTGGCTTCAGCGTGTCTCCTGGGCTaGAAGCTCCATGTGCCTGGGGAACAAAGTGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: RCASLASACLLG*KLHVPGEQSAM Trigger: CATAGCACTTTGTTCCCCAGGCACATGGAGCTTCCAGCCCAGGAGACACGCTGAAGCCAGAGATGCACAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | CCAGGGAGGCCGAAGGTCAGCCTGCTTGTGAGGACATaGACCTTGAAGATGTCCCTGGGAGAAAGGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: PGRPKVSLLVRT*TLKMSLGERHT Trigger: TGTGTGCCTTTCTCCCAGGGACATCTTCAAGGTCCATGTCCTCACAAGCAGGCTGACCTTCGGCCTCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | CCAAACATGAGGATGGTAAAAGACCCCAGAAGCACGTaGGTGAGGCCTGGATCCAGGCACCTGTGGGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PNMRMVKDPRST*VRPGSRHLWEV Trigger: CACCTCCCACAGGTGCCTGGATCCAGGCCTCACCCACGTGCTTCTGGGGTCTTTTACCATCCTCATGTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | CCCGCCTTCTGTAGAGACAGGGGTGAGATGGTCACATaGAGAGCTTTAGAACTGGGGGCAGGGACTTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PAFCRDRGEMVT*RALELGAGTCG Trigger: CCCACAAGTCCCTGCCCCCAGTTCTAAAGCTCTCCATGTGACCATCTCACCCCTGTCTCTACAGAAGGCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR GCA 72 bp | CCCTGGGCTTGCTCTCATAGGAGAATTACCGTGGCCTaGAGGCCAGGTCTAGCTAGAACCTTCATGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PWACSHRRITVA*RPGLARTFMVR Trigger: CCTCACCATGAAGGTTCTAGCTAGACCTGGCCTGCAGGCCACGGTAATTCTCCTATGAGAGCAAGCCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR GCA 72 bp | GCAACAAAGGAACATGGTTTGGGCCTCTCTCTATCATaGTTGGGGGTGACTGGGGTGGAGGGTTCTAGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: ATKEHGLGLSLS*LGVTGVEGSRA Trigger: CGCCCTAGAACCCTCCACCCCAGTCACCCCCAAGCATGATAGAGAGAGGCCCAAACCATGTTCCTTTGTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | CACATGGAGAGCTTTAGAACTGGGGGCAGGGACTTGTaGGCTTGCCATGTAGCCGAGAGAATTCGGGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HMESFRTGGRDL*ACHVAERIRVV Trigger: CACCACCCGAATTCTCTCGGCTACATGGCAAGCCCACAAGTCCCTGCCCCCAGTTCTAAAGCTCTCCATGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR GCA 72 bp | TGGCTTCAGCGTGTCTCCTGGGCTGGAAGCTCCATGTaGCTGGGGAACAAAGTGCTATGTGTCCAGTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: WLQRVSWAGSSM*LGNKVLCVQLS Trigger: ACTCAACTGGACACATAGCACTTTGTTCCCCAGGCACATGGAGCTTCCAGCCCAGGAGACACGCTGAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR GCA 72 bp | GAGAGCTTTAGAACTGGGGGCAGGGACTTGTGGGCTTaGCATGTAGCCGAGAGAATTCGGGTGGTGGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: ESFRTGGRDLWA*HVAERIRVVGI Trigger: AATTCCCACCACCCGAATTCTCTCGGCTACATGGCAAGCCCACAAGTCCCTGCCCCCAGTTCTAAAGCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | AGGAAACATCAAGAGAAATGCCCCGCTGTGCATCTCTaGCTTCAGCGTGTCTCCTGGGCTGGAAGCTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: RKHQEKCPAVHL*LQRVSWAGSSM Trigger: CATGGAGCTTCCAGCCCAGGAGACACGCTGAAGCCAGAGATGCACAGCGGGGCATTTCTCTTGATGTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | GGTATAAAACGGTCCCCAGGGCAAAGACTGTTAAACTaGGGCGCCAACATCACAAACAGCCCTGCCCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: GIKRSPGQRLLN*GANITNSPAHL Trigger: CAGGTGGGCAGGGCTGTTTGTGATGTTGGCGCCCCAGTTTAACAGTCTTTGCCCTGGGGACCGTTTTATACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTCTCTACAGCAAAGGGGTCAGCACTGCAGATGGCCACTACCCTGGCCATGAGCATAGGTTGCCTTTaGTTTGATGTGACCTTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GVSTAKGSALQMATTLAMSIGCL*FDVTLV Trigger: GACCAAGGTCACATCAAACAAAAGGCAACCTATGCT...CATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGTAGAGACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR TCA 72 bp | CCATGTGCCTGGGGAACAAAGTGCTATGTGTCCAGTTaGGTTTTAGTGTTCCTCGTGGTCAGCCCAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PCAWGTKCYVSS*VLVFLVVSPGR Trigger: CCTCCCTGGGCTGACCACGAGGAACACTAAAACTCAACTGGACACATAGCACTTTGTTCCCCAGGCACATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | GCTATACAATTGATGGCAGTCACACATTCCTGGTCCTaGCTTCCAACCCCTCAAGGGTCCCCTAGAACCTCG | + |
|
Preference number: 3 (lower is better) Translates to: AIQLMAVTHSWS*LPTPQGSPRTS Trigger: CGAGGTTCTAGGGGACCCTTGAGGGGTTGGAAGCCAGGACCAGGAATGTGTGACTGCCATCAATTGTATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR GCA 72 bp | TGGTTTAGGTTCTTTCCTACTTTGGGAGGTGCAAGGTaGAGGGCAGAATTGGGAAGCAGACACTGGGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: WFRFFPTLGGAR*RAELGSRHWGH Trigger: GTGTCCCCAGTGTCTGCTTCCCAATTCTGCCCTGCACCTTGCACCTCCCAAAGTAGGAAAGAACCTAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCCAAGCAGGGCCCTTTCCCTGATGCCAGTCCCTGGTCATCTTGGAGCCGTATGTATATGCATATGTaGAAGCACTGGAAAGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LAKQGPFPDASPWSSWSRMYMHM*KHWKDP Trigger: AGGATCTTTCCAGTGCTTCAACATATGCATATACAT...ACGGCTCCAAGATGACCAGGGACTGGCATCAGGGAAAGGGCCCTGCTTGGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | GTGGTCTCATACCATCCTGCCTTTTCCTTCTATGCCTaGCTAACCCTCTACCATATCCAGGTCTCCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VVSYHPAFSFYA*LTLYHIQVSRR Trigger: CCTTCTGGAGACCTGGATATGGTAGAGGGTTAGCCAGGCATAGAAGGAAAAGGCAGGATGGTATGAGACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCCTCAAGCTCTAACACTGGTATCAGCGACAGCCACATTCCCCTGAAGTGCGTGCTATGTGTCCAGTaGAGTTTTAGTGTTCCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: LSSSSNTGISDSHIPLKCVLCVQ*SFSVPR Trigger: ACGAGGAACACTAAAACTCAACTGGACACATAGCAC...GCACTTCAGGGGAATGTGGCTGTCGCTGATACCAGTGTTAGAGCTTGAGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | CAGCAAGCGTTAAGGTGTTCATTGTGGCTATCAGGGTaGGAAGCCTGGAAGCCATTAGCTTTTCAGAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QQALRCSLWLSG*EAWKPLAFQSL Trigger: AAGGCTCTGAAAAGCTAATGGCTTCCAGGCTTCCCACCCTGATAGCCACAATGAACACCTTAACGCTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | GAACCAGACACACAGATGAACGTCAGACCTTCTCTCTaGGCTGACCTTTGCCGAATGCTTTCTCTGACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EPDTQMNVRPSL*ADLCRMLSLTE Trigger: TTCTGTCAGAGAAAGCATTCGGCAAAGGTCAGCCCAGAGAGAAGGTCTGACGTTCATCTGTGTGTCTGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR TCA 72 bp | CTTCTCTCTGGGCTGACCTTTGCCGAATGCTTTCTCTaGCAGAACAGGTGTCTGTTGGTTCCTGAGTATATC | + |
|
Preference number: 3 (lower is better) Translates to: LLSGLTFAECFL*QNRCLLVPEYI Trigger: GATATACTCAGGAACCAACAGACACCTGTTCTGTCAGAGAAAGCATTCGGCAAAGGTCAGCCCAGAGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR GCA 72 bp | GACATGGGCACGCACACACACACACACACACCCCATTaGAGTAACCTCTTCTTTGTGTGGTTTAGGTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: DMGTHTHTHTPH*SNLFFVWFRFF Trigger: AAAGAACCTAAACCACACAAAGAAGAGGTTACTGCAATGGGGTGTGTGTGTGTGTGTGTGCGTGCCCATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | ACCTCTTCTTTGTGTGGTTTAGGTTCTTTCCTACTTTaGGAGGTGCAAGGTGCAGGGCAGAATTGGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TSSLCGLGSFLL*EVQGAGQNWEA Trigger: TGCTTCCCAATTCTGCCCTGCACCTTGCACCTCCCAAAGTAGGAAAGAACCTAAACCACACAAAGAAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCCGTCACCGTCCATGGAGATGGAGTTTGCATAGAATAGATAACACTAAAGTTAGAAAGGCACACACCTaGAGGGAGAAGGTGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRHRPWRWSLHRIDNTKVRKAHT*REKVGR Trigger: CCTTCCCACCTTCTCCCTCAAGGTGTGTGCCTTTCT...AACTTTAGTGTTATCTATTCTATGCAAACTCCATCTCCATGGACGGTGACGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCCGTCACCGTCCATGGAGATGGAGTTTGCATAGAATAGATAACACTAAAGTTGTGAGGACATGGACCTaGAAGATGTCCCTGGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SRHRPWRWSLHRIDNTKVVRTWT*KMSLGE Trigger: TTCTCCCAGGGACATCTTCAAGGTCCATGTCCTCAC...AACTTTAGTGTTATCTATTCTATGCAAACTCCATCTCCATGGACGGTGACGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CAA 90 bp | TTAAACTCATGTAAGAAAGCATCACTGAGTGACACACACACACATGTACATAGAAGAAAGGCACACACCTaGAGGGAGAAGGTGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LNSCKKASLSDTHTHVHRRKAHT*REKVGR Trigger: CCTTCCCACCTTCTCCCTCAAGGTGTGTGCCTTTCT...TCTATGTACATGTGTGTGTGTGTCACTCAGTGATGCTTTCTTACATGAGTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR TCA 72 bp | GCTCTAACACTGGTATCAGCGACAGCCACATTCCCCTaGAGTGCCTTCTTCTTAATACTAGGTATCTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: ALTLVSATATFP*SAFFLILGIFL Trigger: TAGAAAGATACCTAGTATTAAGAAGAAGGCACTTCAGGGGAATGTGGCTGTCGCTGATACCAGTGTTAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CAA 90 bp | AATTTAAAGTCCTCAAAACAAAATTCTACAGCCGTAAGCAACTCTGAAGATGCCGTGAGGACATGGACCTaGAAGATGTCCCTGGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NLKSSKQNSTAVSNSEDAVRTWT*KMSLGE Trigger: TTCTCCCAGGGACATCTTCAAGGTCCATGTCCTCAC...GGCATCTTCAGAGTTGCTTACGGCTGTAGAATTTTGTTTTGAGGACTTTAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | AGGCAGATTAACTGGAGCCGTCACCGTCCATGGAGATaGAGTTTGCATAGAATAGATAACACTAAAGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: RQINWSRHRPWR*SLHRIDNTKVT Trigger: AGTAACTTTAGTGTTATCTATTCTATGCAAACTCCATCTCCATGGACGGTGACGGCTCCAGTTAATCTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CCA 72 bp | TCCTTAAGGCAGATTAACTGGAGCCGTCACCGTCCATaGAGATGGAGTTTGCATAGAATAGATAACACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLRQINWSRHRP*RWSLHRIDNTK Trigger: TTTAGTGTTATCTATTCTATGCAAACTCCATCTCCATGGACGGTGACGGCTCCAGTTAATCTGCCTTAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR-3UTR CAA 90 bp | TTAAACTCATGTAAGAAAGCATCACTGAGTGACACACACACACATGTACATAGAAGCATAGGTTGCCTTTaGTTTGATGTGACCTTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LNSCKKASLSDTHTHVHRSIGCL*FDVTLV Trigger: GACCAAGGTCACATCAAACAAAAGGCAACCTATGCT...TCTATGTACATGTGTGTGTGTGTCACTCAGTGATGCTTTCTTACATGAGTTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR GCA 90 bp | GGTGAGGCCTGGATCCAGGCACCTGTGGGAGGTGAGCCTCCTCATGTGCCACCCGCCACCAGCAGCCTGTaGACCGAGGGGTCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEAWIQAPVGGEPPHVPPATSSL*TEGSSL Trigger: CAGGCTGGACCCCTCGGTGCACAGGCTGCTGGTGGC...GGGTGGCACATGAGGAGGCTCACCTCCCACAGGTGCCTGGATCCAGGCCTCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR TCA 90 bp | CTGGCCAAGCAGGGCCCTTTCCCTGATGCCAGTCCCTGGTCATCTTGGAGCCGTGGGAGGAGAAGCTGGTaGGCACCGCCCCTCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAKQGPFPDASPWSSWSRGRRSW*APPLPR Trigger: TCTGGGGAGGGGCGGTGCTCACCAGCTTCTCCTCCC...ACGGCTCCAAGATGACCAGGGACTGGCATCAGGGAAAGGGCCCTGCTTGGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGCCTGGATCCAGGCACCTGTGGGAGGTGAGCCTCCTCATGTGCCACCCGGCCATGTAGGTGCGTaGCAGGGCACGCTCGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GEAWIQAPVGGEPPHVPPGHVGA*QGTLDV Trigger: TACATCGAGCGTGCCCTGCCACGCACCTACATGGCC...GGGTGGCACATGAGGAGGCTCACCTCCCACAGGTGCCTGGATCCAGGCCTCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR GCA 90 bp | GGGGTCTCTACAGCAAAGGGGTCAGCACTGCAGATGGCCACTACCCTGGCCATGGCTCACAGGGACCCCTaGCCCCAGGTAGAGCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GVSTAKGSALQMATTLAMAHRDP*PQVEQR Trigger: TCGCTGCTCTACCTGGGGGCAGGGGTCCCTGTGAGC...CATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGTAGAGACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGCCTGGATCCAGGCACCTGTGGGAGGTGAGCCTCCTCATGTGCCACCCGGCTCAGCAGTGCAGTaGAGTACATGGTCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GEAWIQAPVGGEPPHVPPGSAVQ*STWSPG Trigger: CCCTGGTGACCATGTACTCCACTGCACTGCTGAGCC...GGGTGGCACATGAGGAGGCTCACCTCCCACAGGTGCCTGGATCCAGGCCTCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR TCA 90 bp | GGTGAGGCCTGGATCCAGGCACCTGTGGGAGGTGAGCCTCCTCATGTGCCACCCTGTCACAGAACTGCTTaGGAAGGCCAGGAACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GEAWIQAPVGGEPPHVPPCHRTA*EGQELG Trigger: GCCAAGTTCCTGGCCTTCTCAAGCAGTTCTGTGACA...GGGTGGCACATGAGGAGGCTCACCTCCCACAGGTGCCTGGATCCAGGCCTCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR GCA 90 bp | TGTGCATCTCTGGCTTCAGCGTGTCTCCTGGGCTGGAAGCTCCATGTGCCTGGGAGAGGCCAAACTGAGTaGACACGGTGGCCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CASLASACLLGWKLHVPGRGQTE*TRWPPA Trigger: TGCTGGTGGCCACCGTGTGCACTCAGTTTGGCCTCT...CCCAGGCACATGGAGCTTCCAGCCCAGGAGACACGCTGAAGCCAGAGATGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR CCA 90 bp | GGGGTCTCTACAGCAAAGGGGTCAGCACTGCAGATGGCCACTACCCTGGCCATGCAACACAGCCAGACCTaGCACCACGTAGCCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVSTAKGSALQMATTLAMQHSQT*HHVADE Trigger: CTCATCGGCTACGTGGTGCCAGGTCTGGCTGTGTTG...CATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGTAGAGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR TCA 90 bp | GGCTGGAAGCTCCATGTGCCTGGGGAACAAAGTGCTATGTGTCCAGTTGAGTTTCATGGGCCTCACTGCTaGGGCTCCACAGGGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GWKLHVPGEQSAMCPVEFHGPHC*GSTGPT Trigger: GGTGGGCCCTGTGGAGCCTCAGCAGTGAGGCCCATG...AAACTCAACTGGACACATAGCACTTTGTTCCCCAGGCACATGGAGCTTCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR GCA 90 bp | GGGGTCTCTACAGCAAAGGGGTCAGCACTGCAGATGGCCACTACCCTGGCCATGGTCAAGGCTCAGCAGTaGAGTGGAGTACATGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVSTAKGSALQMATTLAMVKAQQ*SGVHGH Trigger: GTGACCATGTACTCCACTGCACTGCTGAGCCTTGAC...CATGGCCAGGGTAGTGGCCATCTGCAGTGCTGACCCCTTTGCTGTAGAGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR GCA 90 bp | CACCAGTGGCTGCTGAGCTTGGGTGGTTGTGATGGAAAGGAAAGCTGGGGCAAGAGAGGCCAAACTGAGTaGACACGGTGGCCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HQWLLSLGGCDGKESWGKRGQTE*TRWPPA Trigger: TGCTGGTGGCCACCGTGTGCACTCAGTTTGGCCTCT...CTTGCCCCAGCTTTCCTTTCCATCACAACCACCCAAGCTCAGCAGCCACTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR GCA 90 bp | AGAAGGCCACTGAATGTGGGTCACACACCCGCCTTCTGTAGAGACAGGGGTGAGTGGTCATGGTGTTCTTaGTGGCCAGGTTGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRPLNVGHTPAFCRDRGEWSWCS*WPGWPA Trigger: TGCTGGCCAACCTGGCCAGCAAGAACACCATGACCA...CTCACCCCTGTCTCTACAGAAGGCGGGTGTGTGACCCACATTCAGTGGCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR GCA 90 bp | TGTGCATCTCTGGCTTCAGCGTGTCTCCTGGGCTGGAAGCTCCATGTGCCTGGGGTGGTGTCACAGAACTaGTTGAGAAGGCCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: CASLASACLLGWKLHVPGVVSQN*LRRPGT Trigger: AGTTCCTGGCCTTCTCAAGCAGTTCTGTGACACCAC...CCCAGGCACATGGAGCTTCCAGCCCAGGAGACACGCTGAAGCCAGAGATGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCCACTGAATGTGGGTCACACACCCGCCTTCTGTAGAGACAGGGGTGAGGGGTGTTGTACACACTaGCCATGTAGGTGCGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRPLNVGHTPAFCRDRGEGCCTH*PCRCVA Trigger: TGCCACGCACCTACATGGCCAGTGTGTACAACACCC...CTCACCCCTGTCTCTACAGAAGGCGGGTGTGTGACCCACATTCAGTGGCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR CCA 90 bp | CTGTCCTCAAGCTCTAACACTGGTATCAGCGACAGCCACATTCCCCTGAAGTGCACTGAGTGCACACGGTaGCCACCAGCAGCCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSSNTGISDSHIPLKCTECTR*PPAACA Trigger: TGCACAGGCTGCTGGTGGCCACCGTGTGCACTCAGT...GCACTTCAGGGGAATGTGGCTGTCGCTGATACCAGTGTTAGAGCTTGAGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CAA 72 bp | GGTCACATGGAGAGCTTTAGAACTGGGGGCAGGGACTaGTGGGCTTGCCATGTAGCCGAGAGAATTCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHMESFRTGGRD*WACHVAERIRV Trigger: CACCCGAATTCTCTCGGCTACATGGCAAGCCCACAAGTCCCTGCCCCCAGTTCTAAAGCTCTCCATGTGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR TCA 90 bp | ATGTGCCTGGGGAACAAAGTGCTATGTGTCCAGTTGAGTTTTAGTGTTCCTCGTGGGAGGAGAAGCTGGTaGGCACCGCCCCTCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MCLGNKVLCVQLSFSVPRGRRSW*APPLPR Trigger: TCTGGGGAGGGGCGGTGCTCACCAGCTTCTCCTCCC...ACGAGGAACACTAAAACTCAACTGGACACATAGCACTTTGTTCCCCAGGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR TCA 90 bp | CACCAGTGGCTGCTGAGCTTGGGTGGTTGTGATGGAAAGGAAAGCTGGGGCAAGTGTCACAGAACTGCTTaGGAAGGCCAGGAACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HQWLLSLGGCDGKESWGKCHRTA*EGQELG Trigger: GCCAAGTTCCTGGCCTTCTCAAGCAGTTCTGTGACA...CTTGCCCCAGCTTTCCTTTCCATCACAACCACCCAAGCTCAGCAGCCACTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR GCA 90 bp | CTGTCCTCAAGCTCTAACACTGGTATCAGCGACAGCCACATTCCCCTGAAGTGCACGAAGCCACACACGTaGCGGGTGTTGTACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSSSNTGISDSHIPLKCTKPHT*RVLYTL Trigger: CAGTGTGTACAACACCCGGCACGTGTGTGGCTTCGT...GCACTTCAGGGGAATGTGGCTGTCGCTGATACCAGTGTTAGAGCTTGAGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR GCA 90 bp | CACCAGTGGCTGCTGAGCTTGGGTGGTTGTGATGGAAAGGAAAGCTGGGGCAAGGTGGTGTCACAGAACTaGTTGAGAAGGCCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: HQWLLSLGGCDGKESWGKVVSQN*LRRPGT Trigger: AGTTCCTGGCCTTCTCAAGCAGTTCTGTGACACCAC...CTTGCCCCAGCTTTCCTTTCCATCACAACCACCCAAGCTCAGCAGCCACTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CAA 72 bp | GACCTTGAAGATGTCCCTGGGAGAAAGGCACACACCTaGAGGGAGAAGGTGGGAAGGTTAGTCAGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLEDVPGRKAHT*REKVGRLVRSS Trigger: GCTGCTTCTGACTAACCTTCCCACCTTCTCCCTCAAGGTGTGTGCCTTTCTCCCAGGGACATCTTCAAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR TCA 90 bp | AGCCGTCACCGTCCATGGAGATGGAGTTTGCATAGAATAGATAACACTAAAGTTCATGGGCCTCACTGCTaGGGCTCCACAGGGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SRHRPWRWSLHRIDNTKVHGPHC*GSTGPT Trigger: GGTGGGCCCTGTGGAGCCTCAGCAGTGAGGCCCATG...AACTTTAGTGTTATCTATTCTATGCAAACTCCATCTCCATGGACGGTGACGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR GCA 90 bp | GGCTGGAAGCTCCATGTGCCTGGGGAACAAAGTGCTATGTGTCCAGTTGAGTTTTGGTCATGGTGTTCTTaGTGGCCAGGTTGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GWKLHVPGEQSAMCPVEFWSWCS*WPGWPA Trigger: TGCTGGCCAACCTGGCCAGCAAGAACACCATGACCA...AAACTCAACTGGACACATAGCACTTTGTTCCCCAGGCACATGGAGCTTCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| 3UTR CAA 72 bp | TCCATGTGCCTGGGGAACAAAGTGCTATGTGTCCAGTaGAGTTTTAGTGTTCCTCGTGGTCAGCCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SMCLGNKVLCVQ*SFSVPRGQPRE Trigger: CTCCCTGGGCTGACCACGAGGAACACTAAAACTCAACTGGACACATAGCACTTTGTTCCCCAGGCACATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR GCA 90 bp | AGCCGTCACCGTCCATGGAGATGGAGTTTGCATAGAATAGATAACACTAAAGTTGCTCACAGGGACCCCTaGCCCCAGGTAGAGCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SRHRPWRWSLHRIDNTKVAHRDP*PQVEQR Trigger: TCGCTGCTCTACCTGGGGGCAGGGGTCCCTGTGAGC...AACTTTAGTGTTATCTATTCTATGCAAACTCCATCTCCATGGACGGTGACGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR CCA 90 bp | ATGTGCCTGGGGAACAAAGTGCTATGTGTCCAGTTGAGTTTTAGTGTTCCTCGTCAACACAGCCAGACCTaGCACCACGTAGCCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: MCLGNKVLCVQLSFSVPRQHSQT*HHVADE Trigger: CTCATCGGCTACGTGGTGCCAGGTCTGGCTGTGTTG...ACGAGGAACACTAAAACTCAACTGGACACATAGCACTTTGTTCCCCAGGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR TCA 90 bp | TTAAACTCATGTAAGAAAGCATCACTGAGTGACACACACACACATGTACATAGAGTCCAGAGGCCAAACTaGGTGCACACGGTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LNSCKKASLSDTHTHVHRVQRPN*VHTVAT Trigger: GGTGGCCACCGTGTGCACTCAGTTTGGCCTCTGGAC...TCTATGTACATGTGTGTGTGTGTCACTCAGTGATGCTTTCTTACATGAGTTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR CCA 90 bp | TTAAACTCATGTAAGAAAGCATCACTGAGTGACACACACACACATGTACATAGAGGCCATGTAGGTGCGTaGCAGGGCACGCTCGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LNSCKKASLSDTHTHVHRGHVGA*QGTLDV Trigger: TACATCGAGCGTGCCCTGCCACGCACCTACATGGCC...TCTATGTACATGTGTGTGTGTGTCACTCAGTGATGCTTTCTTACATGAGTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR CCA 90 bp | AATTTAAAGTCCTCAAAACAAAATTCTACAGCCGTAAGCAACTCTGAAGATGCCACTGAGTGCACACGGTaGCCACCAGCAGCCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLKSSKQNSTAVSNSEDATECTR*PPAACA Trigger: TGCACAGGCTGCTGGTGGCCACCGTGTGCACTCAGT...GGCATCTTCAGAGTTGCTTACGGCTGTAGAATTTTGTTTTGAGGACTTTAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS-3UTR CCA 90 bp | TTAAACTCATGTAAGAAAGCATCACTGAGTGACACACACACACATGTACATAGAGGCTCAGCAGTGCAGTaGAGTACATGGTCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNSCKKASLSDTHTHVHRGSAVQ*STWSPG Trigger: CCCTGGTGACCATGTACTCCACTGCACTGCTGAGCC...TCTATGTACATGTGTGTGTGTGTCACTCAGTGATGCTTTCTTACATGAGTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| 3UTR CAA 72 bp | ACAGCTAAGTTAAGAAGCCTTGGGGAAATGTGTGTCTaGCCTGGAGTCTTAAACTCATGTAAGAAAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TAKLRSLGEMCV*PGVLNSCKKAS Trigger: TGATGCTTTCTTACATGAGTTTAAGACTCCAGGCAAGACACACATTTCCCCAAGGCTTCTTAACTTAGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS TCA 90 bp | ACCTGGAGTGGGCAGGGCCCAACAGGTACGCAGGTGCCAGTGCCGTaGGCACCAGCCCCGCCACGGCCATGTTCACGAAGTACACGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TWSGQGPTGTQVPVP*APAPPRPCSRSTRR Trigger: CCGACGTGTACTTCGTGAACATGGCCGTGGCGGGGCTGGTGCTCACGGCACTGGCACCTGCGTACCTGTTGGGCCCTGCCCACTCCAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 ENSMUST00000138631.2 |
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| CDS GCA 90 bp | TGTGCCCCAGGCTCAAGTAGTAAGGTGTCCAGAGGCCAAACTGAGTaGACACGGTGGCCACCAGCAGCCTGTGCACCGAGGGGTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CAPGSSSKVSRGQTE*TRWPPAACAPRGPA Trigger: GGCTGGACCCCTCGGTGCACAGGCTGCTGGTGGCCACCGTGTGCACTCAGTTTGGCCTCTGGACACCTTACTACTTGAGCCTGGGGCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS-3UTR CAA 90 bp | GGTGAGGCCTGGATCCAGGCACCTGTGGGAGGTGAGCCTCCTCATGTGCCACCCTTCTTGCTGGCCAGGTaGGCCAGCACCAGAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GEAWIQAPVGGEPPHVPPFLLAR*ASTRRA Trigger: TGCTCTTCTGGTGCTGGCCAACCTGGCCAGCAAGAA...GGGTGGCACATGAGGAGGCTCACCTCCCACAGGTGCCTGGATCCAGGCCTCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS CCA 90 bp | GGCTCAAGTAGTAAGGTGTCCAGAGGCCAAACTGAGTGCACACGGTaGCCACCAGCAGCCTGTGCACCGAGGGGTCCAGCCTGCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSSSKVSRGQTECTR*PPAACAPRGPACWC Trigger: ACACCAGCAGGCTGGACCCCTCGGTGCACAGGCTGCTGGTGGCCACCGTGTGCACTCAGTTTGGCCTCTGGACACCTTACTACTTGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS CCA 90 bp | CCCCTCCCCAGACGAAGCCACACACGTGCCGGGTGTTGTACACACTaGCCATGTAGGTGCGTGGCAGGGCACGCTCGATGTAGTAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PLPRRSHTRAGCCTH*PCRCVAGHARCSSQ Trigger: TTGACTACTACATCGAGCGTGCCCTGCCACGCACCTACATGGCCAGTGTGTACAACACCCGGCACGTGTGTGGCTTCGTCTGGGGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS CCA 90 bp | GCCACACACGTGCCGGGTGTTGTACACACTGGCCATGTAGGTGCGTaGCAGGGCACGCTCGATGTAGTAGTCAAGGCTCAGCAGTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ATHVPGVVHTGHVGA*QGTLDVVVKAQQCS Trigger: ACTGCACTGCTGAGCCTTGACTACTACATCGAGCGTGCCCTGCCACGCACCTACATGGCCAGTGTGTACAACACCCGGCACGTGTGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS GCA 90 bp | GTCCTGGTCCAGGGGTGTGTCTTCCTTCCCGATTCTCGAGATGAGTaGCAGGGCATACAACACAGCCAGACCTGGCACCACGTAGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: VLVQGCVFLPDSRDE*QGIQHSQTWHHVAD Trigger: ATCGGCTACGTGGTGCCAGGTCTGGCTGTGTTGTATGCCCTGGCACTCATCTCGAGAATCGGGAAGGAAGACACACCCCTGGACCAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS CCA 90 bp | GCCCCGCCACGGCCATGTTCACGAAGTACACGTCGGGCATGGTCATaGTGTTCTTGCTGGCCAGGTTGGCCAGCACCAGAAGAGCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: APPRPCSRSTRRAWS*CSCWPGWPAPEEHY Trigger: ATAATGCTCTTCTGGTGCTGGCCAACCTGGCCAGCAAGAACACCATGACCATGCCCGACGTGTACTTCGTGAACATGGCCGTGGCGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 ENSMUST00000138631.2 |
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| CDS CCA 90 bp | CCCGATTCTCGAGATGAGTGCCAGGGCATACAACACAGCCAGACCTaGCACCACGTAGCCGATGAGCACAAGGATAGCATCGGCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PDSRDECQGIQHSQT*HHVADEHKDSIGCL Trigger: GAGGCAGCCGATGCTATCCTTGTGCTCATCGGCTACGTGGTGCCAGGTCTGGCTGTGTTGTATGCCCTGGCACTCATCTCGAGAATCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS GCA 90 bp | GGTGCGTGGCAGGGCACGCTCGATGTAGTAGTCAAGGCTCAGCAGTaGAGTGGAGTACATGGTCACCAGGGAAGCCACGTTGAACAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GAWQGTLDVVVKAQQ*SGVHGHQGSHVEQD Trigger: ATCCTGTTCAACGTGGCTTCCCTGGTGACCATGTACTCCACTGCACTGCTGAGCCTTGACTACTACATCGAGCGTGCCCTGCCACGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS GCA 90 bp | CAGACCTGGCACCACGTAGCCGATGAGCACAAGGATAGCATCGGCTaGCTCCGTGTTCTGCATCCGGGCACACTCAGCGATTCTAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QTWHHVADEHKDSIG*LRVLHPGTLSDSRR Trigger: TCTTCTAGAATCGCTGAGTGTGCCCGGATGCAGAACACGGAGGCAGCCGATGCTATCCTTGTGCTCATCGGCTACGTGGTGCCAGGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS CCA 90 bp | CGAAGTACACGTCGGGCATGGTCATGGTGTTCTTGCTGGCCAGGTTaGCCAGCACCAGAAGAGCATTATAGCCTAAGCTCACAGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: RSTRRAWSWCSCWPG*PAPEEHYSLSSQGP Trigger: GGGTCCCTGTGAGCTTAGGCTATAATGCTCTTCTGGTGCTGGCCAACCTGGCCAGCAAGAACACCATGACCATGCCCGACGTGTACTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 ENSMUST00000138631.2 |
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| CDS-3UTR CAA 90 bp | CACCAGTGGCTGCTGAGCTTGGGTGGTTGTGATGGAAAGGAAAGCTGGGGCAAGACCAGGGAAGCCACGTaGAACAGGATGAGCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HQWLLSLGGCDGKESWGKTREAT*NRMSSV Trigger: GACACTGCTCATCCTGTTCAACGTGGCTTCCCTGGT...CTTGCCCCAGCTTTCCTTTCCATCACAACCACCCAAGCTCAGCAGCCACTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS GCA 90 bp | TGGCAGTTGATAAGATCAGCTGCATTCCACAAGGGCACTTCGAAATaGTGGGCAGGAACCAGAGAGCAGCCCTGTTTCCCCGAGCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WQLIRSAAFHKGTSK*WAGTREQPCFPEPL Trigger: CAACGGCTCGGGGAAACAGGGCTGCTCTCTGGTTCCTGCCCAGCATTTCGAAGTGCCCTTGTGGAATGCAGCTGATCTTATCAACTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
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| CDS GCA 90 bp | CGGCCATGTTCACGAAGTACACGTCGGGCATGGTCATGGTGTTCTTaGTGGCCAGGTTGGCCAGCACCAGAAGAGCATTATAGCCTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RPCSRSTRRAWSWCS*WPGWPAPEEHYSLS Trigger: GCTTAGGCTATAATGCTCTTCTGGTGCTGGCCAACCTGGCCAGCAAGAACACCATGACCATGCCCGACGTGTACTTCGTGAACATGGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 ENSMUST00000138631.2 |
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| CDS TCA 90 bp | GCATCTTCTTCATCAGCCGCCGGAGCTTGCCGGGGAAGGCTTTGTTaGTGTAACGGTAGAGCAGTGGTGTCACAGAACTGCTTGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASSSSAAGACRGRLC*CNGRAVVSQNCLRR Trigger: CCTTCTCAAGCAGTTCTGTGACACCACTGCTCTACCGTTACATCAACAAAGCCTTCCCCGGCAAGCTCCGGCGGCTGATGAAGAAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS CCA 90 bp | CAGTTGATAAGATCAGCTGCATTCCACAAGGGCACTTCGAAATGCTaGGCAGGAACCAGAGAGCAGCCCTGTTTCCCCGAGCCGTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QLIRSAAFHKGTSKC*AGTREQPCFPEPLH Trigger: ATGCAACGGCTCGGGGAAACAGGGCTGCTCTCTGGTTCCTGCCCAGCATTTCGAAGTGCCCTTGTGGAATGCAGCTGATCTTATCAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
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| CDS CCA 90 bp | CCATGTTCACGAAGTACACGTCGGGCATGGTCATGGTGTTCTTGCTaGCCAGGTTGGCCAGCACCAGAAGAGCATTATAGCCTAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PCSRSTRRAWSWCSC*PGWPAPEEHYSLSS Trigger: TGAGCTTAGGCTATAATGCTCTTCTGGTGCTGGCCAACCTGGCCAGCAAGAACACCATGACCATGCCCGACGTGTACTTCGTGAACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 ENSMUST00000138631.2 |
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| CDS CCA 90 bp | GGCCACATTCTTGGGACTTGGCAGGTCTTCCTGGCTGTTCTGGAGTaGCAGTTGATAAGATCAGCTGCATTCCACAAGGGCACTTCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GHILGTWQVFLAVLE*QLIRSAAFHKGTSK Trigger: TTTCGAAGTGCCCTTGTGGAATGCAGCTGATCTTATCAACTGCCACTCCAGAACAGCCAGGAAGACCTGCCAAGTCCCAAGAATGTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
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| CDS-3UTR CAA 90 bp | AGCCGTCACCGTCCATGGAGATGGAGTTTGCATAGAATAGATAACACTAAAGTTGCCCACGCTGTGCTGTaGAGTGGGCCACAGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SRHRPWRWSLHRIDNTKVAHAVL*SGPQLH Trigger: GTGGAGCTGTGGCCCACTCAACAGCACAGCGTGGGC...AACTTTAGTGTTATCTATTCTATGCAAACTCCATCTCCATGGACGGTGACGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS-3UTR CAA 90 bp | ATGTGCCTGGGGAACAAAGTGCTATGTGTCCAGTTGAGTTTTAGTGTTCCTCGTTTCTTGCTGGCCAGGTaGGCCAGCACCAGAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: MCLGNKVLCVQLSFSVPRFLLAR*ASTRRA Trigger: TGCTCTTCTGGTGCTGGCCAACCTGGCCAGCAAGAA...ACGAGGAACACTAAAACTCAACTGGACACATAGCACTTTGTTCCCCAGGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS-3UTR CAA 90 bp | AATTTAAAGTCCTCAAAACAAAATTCTACAGCCGTAAGCAACTCTGAAGATGCCGCCCACGCTGTGCTGTaGAGTGGGCCACAGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NLKSSKQNSTAVSNSEDAAHAVL*SGPQLH Trigger: GTGGAGCTGTGGCCCACTCAACAGCACAGCGTGGGC...GGCATCTTCAGAGTTGCTTACGGCTGTAGAATTTTGTTTTGAGGACTTTAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS-3UTR CAA 90 bp | AATTTAAAGTCCTCAAAACAAAATTCTACAGCCGTAAGCAACTCTGAAGATGCCGAGAAGGCCAGGAACTaGGCCAGGTCCTTAGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: NLKSSKQNSTAVSNSEDAEKARN*ARSLAT Trigger: GGTTGCTAAGGACCTGGCCAAGTTCCTGGCCTTCTC...GGCATCTTCAGAGTTGCTTACGGCTGTAGAATTTTGTTTTGAGGACTTTAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS GCA 72 bp | CCCGAGGGGTCGGGGGAGCAGTGGCGGCGCCCGCAGTaGATCTTCTTCATCAGCCGCCGGAGCTTGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PEGSGEQWRRPQ*IFFISRRSLPG Trigger: CCCCGGCAAGCTCCGGCGGCTGATGAAGAAGATGCACTGCGGGCGCCGCCACTGCTCCCCCGACCCCTCGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS GCA 72 bp | CCACCTGGAGTGGGCAGGGCCCAACAGGTACGCAGGTaGCAGTGCCGTGAGCACCAGCCCCGCCACGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PPGVGRAQQVRR*QCREHQPRHGH Trigger: ATGGCCGTGGCGGGGCTGGTGCTCACGGCACTGGCACCTGCGTACCTGTTGGGCCCTGCCCACTCCAGGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 ENSMUST00000138631.2 |
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| CDS TCA 72 bp | GGGCAGGGCCCAACAGGTACGCAGGTGCCAGTGCCGTaGGCACCAGCCCCGCCACGGCCATGTTCACGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GQGPTGTQVPVP*APAPPRPCSRS Trigger: ACTTCGTGAACATGGCCGTGGCGGGGCTGGTGCTCACGGCACTGGCACCTGCGTACCTGTTGGGCCCTGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 ENSMUST00000138631.2 |
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| CDS CCA 72 bp | CACAGCAGCCCAGTGCCCTGCCGAGGCCAAGCGCCATaGAAACGCCCGGAACTTCCCTTCCCGGGCCACATT | + |
|
Preference number: 6 (lower is better) Translates to: HSSPVPCRGQAP*KRPELPFPGHI Trigger: AATGTGGCCCGGGAAGGGAAGTTCCGGGCGTTTCCATGGCGCTTGGCCTCGGCAGGGCACTGGGCTGCTGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
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| CDS GCA 72 bp | CAGGAACCAGAGAGCAGCCCTGTTTCCCCGAGCCGTTaGATTTGTCTTTCGTGGGCTTGGGGTGGTGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QEPESSPVSPSR*ICLSWAWGGGG Trigger: CCCACCACCACCCCAAGCCCACGAAAGACAAATGCAACGGCTCGGGGAAACAGGGCTGCTCTCTGGTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
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| CDS GCA 72 bp | GGCTCAAGTAGTAAGGTGTCCAGAGGCCAAACTGAGTaGACACGGTGGCCACCAGCAGCCTGTGCACCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSSSKVSRGQTE*TRWPPAACAPR Trigger: CCTCGGTGCACAGGCTGCTGGTGGCCACCGTGTGCACTCAGTTTGGCCTCTGGACACCTTACTACTTGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS CCA 72 bp | AGACGAAGCCACACACGTGCCGGGTGTTGTACACACTaGCCATGTAGGTGCGTGGCAGGGCACGCTCGATGT | + |
|
Preference number: 6 (lower is better) Translates to: RRSHTRAGCCTH*PCRCVAGHARC Trigger: ACATCGAGCGTGCCCTGCCACGCACCTACATGGCCAGTGTGTACAACACCCGGCACGTGTGTGGCTTCGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS CAA 72 bp | GCAGGAACCAGAGAGCAGCCCTGTTTCCCCGAGCCGTaGCATTTGTCTTTCGTGGGCTTGGGGTGGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGTREQPCFPEP*HLSFVGLGWWW Trigger: CCACCACCACCCCAAGCCCACGAAAGACAAATGCAACGGCTCGGGGAAACAGGGCTGCTCTCTGGTTCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
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| CDS GCA 72 bp | CACCACGTAGCCGATGAGCACAAGGATAGCATCGGCTaGCTCCGTGTTCTGCATCCGGGCACACTCAGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: HHVADEHKDSIG*LRVLHPGTLSD Trigger: ATCGCTGAGTGTGCCCGGATGCAGAACACGGAGGCAGCCGATGCTATCCTTGTGCTCATCGGCTACGTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS CCA 72 bp | GTGCCGGGTGTTGTACACACTGGCCATGTAGGTGCGTaGCAGGGCACGCTCGATGTAGTAGTCAAGGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: VPGVVHTGHVGA*QGTLDVVVKAQ Trigger: CTGAGCCTTGACTACTACATCGAGCGTGCCCTGCCACGCACCTACATGGCCAGTGTGTACAACACCCGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS CAA 72 bp | CCCGGAACTTCCCTTCCCGGGCCACATTCTTGGGACTaGGCAGGTCTTCCTGGCTGTTCTGGAGTGGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PGTSLPGPHSWD*AGLPGCSGVAV Trigger: AACTGCCACTCCAGAACAGCCAGGAAGACCTGCCAAGTCCCAAGAATGTGGCCCGGGAAGGGAAGTTCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
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| CDS CAA 90 bp | AGGCTCAGCAGTGCAGTGGAGTACATGGTCACCAGGGAAGCCACGTaGAACAGGATGAGCAGTGTCACATGGGCCTCACTGCTGAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLSSAVEYMVTREAT*NRMSSVTWASLLRL Trigger: GAGCCTCAGCAGTGAGGCCCATGTGACACTGCTCATCCTGTTCAACGTGGCTTCCCTGGTGACCATGTACTCCACTGCACTGCTGAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS TCA 72 bp | GGTCCAGGGGTGTGTCTTCCTTCCCGATTCTCGAGATaGGTGCCAGGGCATACAACACAGCCAGACCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GPGVCLPSRFSR*VPGHTTQPDLA Trigger: TGCCAGGTCTGGCTGTGTTGTATGCCCTGGCACTCATCTCGAGAATCGGGAAGGAAGACACACCCCTGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS GCA 72 bp | CAGGGGTGTGTCTTCCTTCCCGATTCTCGAGATGAGTaGCAGGGCATACAACACAGCCAGACCTGGCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: QGCVFLPDSRDE*QGIQHSQTWHH Trigger: GTGGTGCCAGGTCTGGCTGTGTTGTATGCCCTGGCACTCATCTCGAGAATCGGGAAGGAAGACACACCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS CCA 72 bp | CGGCCATGTTCACGAAGTACACGTCGGGCATGGTCATaGTGTTCTTGCTGGCCAGGTTGGCCAGCACCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RPCSRSTRRAWS*CSCWPGWPAPE Trigger: TTCTGGTGCTGGCCAACCTGGCCAGCAAGAACACCATGACCATGCCCGACGTGTACTTCGTGAACATGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 ENSMUST00000138631.2 |
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| CDS TCA 72 bp | TCATCAGCCGCCGGAGCTTGCCGGGGAAGGCTTTGTTaGTGTAACGGTAGAGCAGTGGTGTCACAGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSAAGACRGRLC*CNGRAVVSQNC Trigger: GCAGTTCTGTGACACCACTGCTCTACCGTTACATCAACAAAGCCTTCCCCGGCAAGCTCCGGCGGCTGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS GCA 72 bp | CAGGGCACGCTCGATGTAGTAGTCAAGGCTCAGCAGTaGAGTGGAGTACATGGTCACCAGGGAAGCCACGTT | + |
|
Preference number: 6 (lower is better) Translates to: QGTLDVVVKAQQ*SGVHGHQGSHV Trigger: AACGTGGCTTCCCTGGTGACCATGTACTCCACTGCACTGCTGAGCCTTGACTACTACATCGAGCGTGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS CCA 72 bp | GTTTCCCCGAGCCGTTGCATTTGTCTTTCGTGGGCTTaGGGTGGTGGTGGGGTTACATCTGTCCTCACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VSPSRCICLSWA*GGGGVTSVLTS Trigger: ACTGGTGAGGACAGATGTAACCCCACCACCACCCCAAGCCCACGAAAGACAAATGCAACGGCTCGGGGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
||
| CDS CCA 72 bp | AGATCAGCTGCATTCCACAAGGGCACTTCGAAATGCTaGGCAGGAACCAGAGAGCAGCCCTGTTTCCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RSAAFHKGTSKC*AGTREQPCFPE Trigger: CTCGGGGAAACAGGGCTGCTCTCTGGTTCCTGCCCAGCATTTCGAAGTGCCCTTGTGGAATGCAGCTGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
||
| CDS CCA 72 bp | CGAGATGAGTGCCAGGGCATACAACACAGCCAGACCTaGCACCACGTAGCCGATGAGCACAAGGATAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RDECQGIQHSQT*HHVADEHKDSI Trigger: GATGCTATCCTTGTGCTCATCGGCTACGTGGTGCCAGGTCTGGCTGTGTTGTATGCCCTGGCACTCATCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
||
| CDS CCA 72 bp | CCGTTGCATTTGTCTTTCGTGGGCTTGGGGTGGTGGTaGGGTTACATCTGTCCTCACCAGTTCCCCATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PLHLSFVGLGWW*GYICPHQFPMF Trigger: GAACATGGGGAACTGGTGAGGACAGATGTAACCCCACCACCACCCCAAGCCCACGAAAGACAAATGCAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
||
| CDS GCA 72 bp | ATAAGATCAGCTGCATTCCACAAGGGCACTTCGAAATaGTGGGCAGGAACCAGAGAGCAGCCCTGTTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: IRSAAFHKGTSK*WAGTREQPCFP Trigger: GGGGAAACAGGGCTGCTCTCTGGTTCCTGCCCAGCATTTCGAAGTGCCCTTGTGGAATGCAGCTGATCTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
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| CDS GCA 72 bp | TCACGAAGTACACGTCGGGCATGGTCATGGTGTTCTTaGTGGCCAGGTTGGCCAGCACCAGAAGAGCATTAT | + |
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Preference number: 6 (lower is better) Translates to: SRSTRRAWSWCS*WPGWPAPEEHY Trigger: ATAATGCTCTTCTGGTGCTGGCCAACCTGGCCAGCAAGAACACCATGACCATGCCCGACGTGTACTTCGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 ENSMUST00000138631.2 |
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| CDS CCA 72 bp | CTTGGGACTTGGCAGGTCTTCCTGGCTGTTCTGGAGTaGCAGTTGATAAGATCAGCTGCATTCCACAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LGTWQVFLAVLE*QLIRSAAFHKG Trigger: GCCCTTGTGGAATGCAGCTGATCTTATCAACTGCCACTCCAGAACAGCCAGGAAGACCTGCCAAGTCCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
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| CDS CAA 72 bp | TTCACGAAGTACACGTCGGGCATGGTCATGGTGTTCTaGCTGGCCAGGTTGGCCAGCACCAGAAGAGCATTA | + |
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Preference number: 6 (lower is better) Translates to: FTKYTSGMVMVF*LARLASTRRAL Trigger: TAATGCTCTTCTGGTGCTGGCCAACCTGGCCAGCAAGAACACCATGACCATGCCCGACGTGTACTTCGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 ENSMUST00000138631.2 |
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| CDS TCA 72 bp | GATGTAACGGTAGAGCAGTGGTGTCACAGAACTGCTTaGGAAGGCCAGGAACTTGGCCAGGTCCTTAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: DVTVEQWCHRTA*EGQELGQVLSN Trigger: GTTGCTAAGGACCTGGCCAAGTTCCTGGCCTTCTCAAGCAGTTCTGTGACACCACTGCTCTACCGTTACATC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051293.8 ENSMUST00000100514.3 |
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| CDS CAA 72 bp | ACTTGGCAGGTCTTCCTGGCTGTTCTGGAGTGGCAGTaGATAAGATCAGCTGCATTCCACAAGGGCACTTCG | + |
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Preference number: 6 (lower is better) Translates to: TWQVFLAVLEWQ*IRSAAFHKGTS Trigger: CGAAGTGCCCTTGTGGAATGCAGCTGATCTTATCAACTGCCACTCCAGAACAGCCAGGAAGACCTGCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
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| CDS CAA 90 bp | ATTCTTGGGACTTGGCAGGTCTTCCTGGCTGTTCTGGAGTGGCAGTaGATAAGATCAGCTGCATTCCACAAGGGCACTTCGAAATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ILGTWQVFLAVLEWQ*IRSAAFHKGTSKCW Trigger: CCAGCATTTCGAAGTGCCCTTGTGGAATGCAGCTGATCTTATCAACTGCCACTCCAGAACAGCCAGGAAGACCTGCCAAGTCCCAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053120.5 |
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