Pregenerated sensors for GPR143 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025333Ensembl transcript IDs: ENSMUST00000026383.4
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGACATATTCAGTGAACTCCACTATGGTGACCAGAGTGGAATTTaGAAGATCATACATACATTGTGGCAGCAAGAACACAATCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: KDIFSELHYGDQSGI*KIIHTLWQQEHNPK Trigger: TTTTGGATTGTGTTCTTGCTGCCACAATGTATGTATGATCTTTCAAATTCCACTCTGGTCACCATAGTGGAGTTCACTGAATATGTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGGTGATACTGACTGTTCTAGAGGGAACTTTCCATCTTCAAGTTCTGATGTGACAAGACACAGAACCTaGAAAATAGGGGTGTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: RGDTDCSRGNFPSSSSDVTRHRT*KIGVSD Trigger: GTCAGACACCCCTATTTTTCAGGTTCTGTGTCTTGT...CACATCAGAACTTGAAGATGGAAAGTTCCCTCTAGAACAGTCAGTATCACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR GCA 90 bp | ACTGACTGTTCTAGAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTTTCTCGCACCAGGCGGAGAGTaGCGCTTCCCAGGCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: TDCSRGNFPSSSSDVLFLAPGGE*RFPGTG Trigger: CCCTGTGCCTGGGAAGCGGCACTCTCCGCCTGGTGC...GAGAAACAACACATCAGAACTTGAAGATGGAAAGTTCCCTCTAGAACAGTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR TCA 90 bp | GAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTTTCTCCCAGTATAAAGGACGCCCTGATAGGAGCTaGAGGAGGCCAAGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: EGTFHLQVLMCCFSQYKGRPDRS*RRPSTR Trigger: CCTGGTGCTTGGCCTCCTTCAGCTCCTATCAGGGCG...TCCTTTATACTGGGAGAAACAACACATCAGAACTTGAAGATGGAAAGTTCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR GCA 90 bp | TACATACATTGTGGCAGCAAGAACACAATCCAAAACAACAAGACACAGAACCTGCAGGGGTCTGGTACGTaGCCTCAGCAGCAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: YIHCGSKNTIQNNKTQNLQGSGT*PQQQRQ Trigger: CTGCCTCTGCTGCTGAGGGCACGTACCAGACCCCTG...CAGGTTCTGTGTCTTGTTGTTTTGGATTGTGTTCTTGCTGCCACAATGTATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CCA 90 bp | TACATACATTGTGGCAGCAAGAACACAATCCAAAACAACAAGACACAGAACCTGCCCAGGCACAGGGCATaGAACACCCGCGGTTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: YIHCGSKNTIQNNKTQNLPRHRA*NTRGWK Trigger: CTTCCAACCGCGGGTGTTCCATGCCCTGTGCCTGGG...CAGGTTCTGTGTCTTGTTGTTTTGGATTGTGTTCTTGCTGCCACAATGTATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CCA 90 bp | GAAAAAGTCCAAGGGGTAATTAAGAGTCAAGAGGTGATACTGACTGTTCTAGAGGCAGCACGGAGGATGTaGACTGAGGCGGCTGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: EKVQGVIKSQEVILTVLEAARRM*TEAAGD Trigger: ATCCCCAGCCGCCTCAGTCCACATCCTCCGTGCTGC...CTCTAGAACAGTCAGTATCACCTCTTGACTCTTAATTACCCCTTGGACTTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CCA 90 bp | ACTGACTGTTCTAGAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTTTCTCGGCCCCTCTCACACCTaGACACAGAAGGGTAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: TDCSRGNFPSSSSDVLFLGPSHT*TQKGSR Trigger: TCTACTACCCTTCTGTGTCCAGGTGTGAGAGGGGCC...GAGAAACAACACATCAGAACTTGAAGATGGAAAGTTCCCTCTAGAACAGTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CCA 90 bp | GTGGAATTTGAAAGATCATACATACATTGTGGCAGCAAGAACACAATCCAAAACGCAAGTCACAGGCAGTaGCAGCACGGAGGATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: VEFERSYIHCGSKNTIQNASHRQ*QHGGCG Trigger: TCCACATCCTCCGTGCTGCCACTGCCTGTGACTTGC...GTTTTGGATTGTGTTCTTGCTGCCACAATGTATGTATGATCTTTCAAATTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CCA 90 bp | ACCAGAGTGGAATTTGAAAGATCATACATACATTGTGGCAGCAAGAACACAATCGCACTGTACAACAGCTaGATCCACATTGCGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: TRVEFERSYIHCGSKNTIALYNS*IHIALP Trigger: GGGGAGCGCAATGTGGATCCAGCTGTTGTACAGTGC...GATTGTGTTCTTGCTGCCACAATGTATGTATGATCTTTCAAATTCCACTCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR TCA 90 bp | AGGACATATTCAGTGAACTCCACTATGGTGACCAGAGTGGAATTTGAAAGATCAGTGGCAAGTATGTGGTaGCATAATGGGGGATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RTYSVNSTMVTRVEFERSVASMW*HNGGWH Trigger: ATGCCATCCCCCATTATGTCACCACATACTTGCCAC...TGATCTTTCAAATTCCACTCTGGTCACCATAGTGGAGTTCACTGAATATGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR TCA 90 bp | GAAAAAGTCCAAGGGGTAATTAAGAGTCAAGAGGTGATACTGACTGTTCTAGAGGAAGTCACTGTCTTGTaGAACAGGATTGGGTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: EKVQGVIKSQEVILTVLEEVTVL*NRIGLA Trigger: GGCCAACCCAATCCTGTTTCACAAGACAGTGACTTC...CTCTAGAACAGTCAGTATCACCTCTTGACTCTTAATTACCCCTTGGACTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR GCA 90 bp | GGAACTTTCCATCTTCAAGTTCTGATGTGTTGTTTCTCCCAGTATAAAGGACATGTAGTAGAGCATGACTaGTCCCTCCACACAGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GTFHLQVLMCCFSQYKGHVVEHD*SLHTEQ Trigger: CTGCTCTGTGTGGAGGGAGCAGTCATGCTCTACTAC...ATGTCCTTTATACTGGGAGAAACAACACATCAGAACTTGAAGATGGAAAGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR GCA 90 bp | ACCAGAGTGGAATTTGAAAGATCATACATACATTGTGGCAGCAAGAACACAATCGATGGACATCCAGGCTaGATCCTGTCCAGCCATAGA | + |
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Preference number: 4 (lower is better) Translates to: TRVEFERSYIHCGSKNTIDGHPG*ILSSHR Trigger: TCTATGGCTGGACAGGATGCAGCCTGGATGTCCATC...GATTGTGTTCTTGCTGCCACAATGTATGTATGATCTTTCAAATTCCACTCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CCA 90 bp | GTGATACTGACTGTTCTAGAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTGTCCTAGCTGCATTCTaGATGCGTTTCAGAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VILTVLEGTFHLQVLMCCVLAAF*MRFREP Trigger: AGGCTCTCTGAAACGCATCCAGAATGCAGCTAGGAC...ACAACACATCAGAACTTGAAGATGGAAAGTTCCCTCTAGAACAGTCAGTATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CCA 90 bp | GTAATTAAGAGTCAAGAGGTGATACTGACTGTTCTAGAGGGAACTTTCCATCTTAGTTCCCCCTGGGCTTaGGAAATGGAGTCAACTTCC | + |
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Preference number: 4 (lower is better) Translates to: VIKSQEVILTVLEGTFHLSSPWA*EMESTS Trigger: GGAAGTTGACTCCATTTCCCAAGCCCAGGGGGAACT...AAGATGGAAAGTTCCCTCTAGAACAGTCAGTATCACCTCTTGACTCTTAATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR TCA 90 bp | ACCAGAGTGGAATTTGAAAGATCATACATACATTGTGGCAGCAAGAACACAATCGTCCCGCCGATCTCCTaGTCACCAAGTATACATCAA | + |
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Preference number: 4 (lower is better) Translates to: TRVEFERSYIHCGSKNTIVPPIS*SPSIHQ Trigger: TTGATGTATACTTGGTGATCAGGAGATCGGCGGGAC...GATTGTGTTCTTGCTGCCACAATGTATGTATGATCTTTCAAATTCCACTCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CCA 90 bp | GTGATACTGACTGTTCTAGAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTGACAAGAGAAGTCCTTaGGCTGGATTCAGTATTCCC | + |
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Preference number: 4 (lower is better) Translates to: VILTVLEGTFHLQVLMCCDKRSP*AGFSIP Trigger: GGGAATACTGAATCCAGCCCAAGGACTTCTCTTGTC...ACAACACATCAGAACTTGAAGATGGAAAGTTCCCTCTAGAACAGTCAGTATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR GCA 90 bp | GAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTTTCTCCCAGTATAAAGGAGTTGCAGGACCCAGTTaGAGTATGGATTTCAACAGT | + |
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Preference number: 4 (lower is better) Translates to: EGTFHLQVLMCCFSQYKGVAGPS*SMDFNS Trigger: ACTGTTGAAATCCATACTGCAACTGGGTCCTGCAAC...TCCTTTATACTGGGAGAAACAACACATCAGAACTTGAAGATGGAAAGTTCCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CCA 90 bp | GAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTTTCTCCCAGTATAAAGGACCTGGGCTTGGGAAATaGAGTCAACTTCCTTTATGT | + |
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Preference number: 4 (lower is better) Translates to: EGTFHLQVLMCCFSQYKGPGLGK*SQLPLC Trigger: ACATAAAGGAAGTTGACTCCATTTCCCAAGCCCAGG...TCCTTTATACTGGGAGAAACAACACATCAGAACTTGAAGATGGAAAGTTCCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR TCA 90 bp | GAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTTTCTCCCAGTATAAAGGATGGAAATGTTTTCAATaGACTCTGGGTAGGCTATCC | + |
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Preference number: 4 (lower is better) Translates to: EGTFHLQVLMCCFSQYKGWKCFQ*TLGRLS Trigger: GGATAGCCTACCCAGAGTTCATTGAAAACATTTCCA...TCCTTTATACTGGGAGAAACAACACATCAGAACTTGAAGATGGAAAGTTCCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR TCA 90 bp | GTGGAATTTGAAAGATCATACATACATTGTGGCAGCAAGAACACAATCCAAAACGTCATTGTTTCCCACTaGATCACCATCTTGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: VEFERSYIHCGSKNTIQNVIVSH*ITILGG Trigger: TCCTCCCAAGATGGTGATTCAGTGGGAAACAATGAC...GTTTTGGATTGTGTTCTTGCTGCCACAATGTATGTATGATCTTTCAAATTCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CCA 90 bp | GTGATACTGACTGTTCTAGAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTGAGAAGTCCTTGGGCTaGATTCAGTATTCCCATTAT | + |
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Preference number: 4 (lower is better) Translates to: VILTVLEGTFHLQVLMCCEKSLG*IQYSHY Trigger: ATAATGGGAATACTGAATCCAGCCCAAGGACTTCTC...ACAACACATCAGAACTTGAAGATGGAAAGTTCCCTCTAGAACAGTCAGTATCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CCA 90 bp | AGAGGTGATACTGACTGTTCTAGAGGGAACTTTCCATCTTCAAGTTCTGATGTGGGATTTCAACAGTACTaGCATCTGAATCTTCAGACA | + |
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Preference number: 4 (lower is better) Translates to: RGDTDCSRGNFPSSSSDVGFQQY*HLNLQT Trigger: TGTCTGAAGATTCAGATGCCAGTACTGTTGAAATCC...CACATCAGAACTTGAAGATGGAAAGTTCCCTCTAGAACAGTCAGTATCACCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CCA 90 bp | GTAATTAAGAGTCAAGAGGTGATACTGACTGTTCTAGAGGGAACTTTCCATCTTGACCCAGTTGCAGTATaGATTTCAACAGTACTGGCA | + |
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Preference number: 4 (lower is better) Translates to: VIKSQEVILTVLEGTFHLDPVAV*ISTVLA Trigger: TGCCAGTACTGTTGAAATCCATACTGCAACTGGGTC...AAGATGGAAAGTTCCCTCTAGAACAGTCAGTATCACCTCTTGACTCTTAATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR GCA 90 bp | ACTGACTGTTCTAGAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTTTCTCAATCTTCAGACAAAATaGTCAGCACCTCATCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: TDCSRGNFPSSSSDVLFLNLQTK*SAPHQK Trigger: CTTCTGATGAGGTGCTGAGCATTTTGTCTGAAGATT...GAGAAACAACACATCAGAACTTGAAGATGGAAAGTTCCCTCTAGAACAGTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR TCA 90 bp | GTAATTAAGAGTCAAGAGGTGATACTGACTGTTCTAGAGGGAACTTTCCATCTTAACAGTACTGGCATCTaGATCTTCAGACAAAATGCT | + |
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Preference number: 4 (lower is better) Translates to: VIKSQEVILTVLEGTFHLNSTGI*IFRQNA Trigger: AGCATTTTGTCTGAAGATTCAGATGCCAGTACTGTT...AAGATGGAAAGTTCCCTCTAGAACAGTCAGTATCACCTCTTGACTCTTAATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR GCA 90 bp | GAATTTGAAAGATCATACATACATTGTGGCAGCAAGAACACAATCCAAAACAACCAAGTATACATCAACTaGATAGCAAAAGAGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: EFERSYIHCGSKNTIQNNQVYIN*IAKEPP Trigger: TGGTGGCTCTTTTGCTATGCAGTTGATGTATACTTG...GTTGTTTTGGATTGTGTTCTTGCTGCCACAATGTATGTATGATCTTTCAAATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CCA 90 bp | CGGAGAGTGCCGCTTCCCAGGCACAGGGCATGGAACACCCGCGGTTaGAAGCTTAGCACCAGCTGTGTGGCTGCGTCCCACGTAGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: RRVPLPRHRAWNTRG*KLSTSCVAASHVGQ Trigger: CTGCCCTACGTGGGACGCAGCCACACAGCTGGTGCTAAGCTTCCAACCGCGGGTGTTCCATGCCCTGTGCCTGGGAAGCGGCACTCTCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS GCA 90 bp | GGTGCTCCGTCCCGCCGATCTCCTGATCACCAAGTATACATCAACTaGATAGCAAAAGAGCCACCAGAAGCAGGCACTGTACAACAGCTG | + |
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Preference number: 5 (lower is better) Translates to: GAPSRRSPDHQVYIN*IAKEPPEAGTVQQL Trigger: CAGCTGTTGTACAGTGCCTGCTTCTGGTGGCTCTTTTGCTATGCAGTTGATGTATACTTGGTGATCAGGAGATCGGCGGGACGGAGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS GCA 90 bp | AGAGTTCCCCCTGGGCTTGGGAAATGGAGTCAACTTCCTTTATGTTaGAGGACCCAGTTGCAGTATGGATTTCAACAGTACTGGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: RVPPGLGKWSQLPLC*RTQLQYGFQQYWHL Trigger: CAGATGCCAGTACTGTTGAAATCCATACTGCAACTGGGTCCTGCAACATAAAGGAAGTTGACTCCATTTCCCAAGCCCAGGGGGAACTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CAA 90 bp | AGAGGTGATACTGACTGTTCTAGAGGGAACTTTCCATCTTCAAGTTCTGATGTGGAGTTCCCCCTGGGCTaGGGAAATGGAGTCAACTTC | + |
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Preference number: 5 (lower is better) Translates to: RGDTDCSRGNFPSSSSDVEFPLG*GNGVNF Trigger: GAAGTTGACTCCATTTCCCAAGCCCAGGGGGAACTC...CACATCAGAACTTGAAGATGGAAAGTTCCCTCTAGAACAGTCAGTATCACCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS GCA 90 bp | TTGGGCTGGATTCAGTATTCCCATTATAAACCATGTGGTCCTAGCTaGATTCTGGATGCGTTTCAGAGAGCCTCCATGGATATCTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: LGWIQYSHYKPCGPS*ILDAFQRASMDIWL Trigger: CAACCAGATATCCATGGAGGCTCTCTGAAACGCATCCAGAATGCAGCTAGGACCACATGGTTTATAATGGGAATACTGAATCCAGCCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CAA 90 bp | GAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTTTCTCCCAGTATAAAGGAAACCTTCCTGGGGTTTaGATGGGGCACACAGGAACG | + |
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Preference number: 5 (lower is better) Translates to: EGTFHLQVLMCCFSQYKGNLPGV*MGHTGT Trigger: CGTTCCTGTGTGCCCCATCAAAACCCCAGGAAGGTT...TCCTTTATACTGGGAGAAACAACACATCAGAACTTGAAGATGGAAAGTTCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS TCA 90 bp | GTTGCAGGACCCAGTTGCAGTATGGATTTCAACAGTACTGGCATCTaGATCTTCAGACAAAATGCTCAGCACCTCATCAGAAGTATGTCC | + |
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Preference number: 5 (lower is better) Translates to: VAGPSCSMDFNSTGI*IFRQNAQHLIRSMS Trigger: GGACATACTTCTGATGAGGTGCTGAGCATTTTGTCTGAAGATTCAGATGCCAGTACTGTTGAAATCCATACTGCAACTGGGTCCTGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS GCA 90 bp | CCACATTGCGCTCCCCACACAGAAAGTAGCAGGCCAAATGTCTGTTaGATTCACATTGGAAATGTTTTCAATGAACTCTGGGTAGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: PHCAPHTESSRPNVC*IHIGNVFNELWVGY Trigger: ATAGCCTACCCAGAGTTCATTGAAAACATTTCCAATGTGAATGCAACAGACATTTGGCCTGCTACTTTCTGTGTGGGGAGCGCAATGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CAA 90 bp | AGAGGTGATACTGACTGTTCTAGAGGGAACTTTCCATCTTCAAGTTCTGATGTGCAGCAGAGGCAGTCATaGTTTCCCACTGAATCACCA | + |
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Preference number: 5 (lower is better) Translates to: RGDTDCSRGNFPSSSSDVQQRQS*FPTESP Trigger: TGGTGATTCAGTGGGAAACAATGACTGCCTCTGCTG...CACATCAGAACTTGAAGATGGAAAGTTCCCTCTAGAACAGTCAGTATCACCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS GCA 90 bp | CAGTATGGATTTCAACAGTACTGGCATCTGAATCTTCAGACAAAATaGTCAGCACCTCATCAGAAGTATGTCCCCCGACACATACAACCT | + |
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Preference number: 5 (lower is better) Translates to: QYGFQQYWHLNLQTK*SAPHQKYVPRHIQP Trigger: AGGTTGTATGTGTCGGGGGACATACTTCTGATGAGGTGCTGAGCATTTTGTCTGAAGATTCAGATGCCAGTACTGTTGAAATCCATACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CCA 90 bp | CCAAATGTCTGTTGCATTCACATTGGAAATGTTTTCAATGAACTCTaGGTAGGCTATCCACACTGTGGACCTGATAACGATTCCCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: PNVCCIHIGNVFNEL*VGYPHCGPDNDSQA Trigger: TGCCTGGGAATCGTTATCAGGTCCACAGTGTGGATAGCCTACCCAGAGTTCATTGAAAACATTTCCAATGTGAATGCAACAGACATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CCA 90 bp | GGATTCAGTATTCCCATTATAAACCATGTGGTCCTAGCTGCATTCTaGATGCGTTTCAGAGAGCCTCCATGGATATCTGGTTGCATTTCA | + |
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Preference number: 5 (lower is better) Translates to: GFSIPIINHVVLAAF*MRFREPPWISGCIS Trigger: TGAAATGCAACCAGATATCCATGGAGGCTCTCTGAAACGCATCCAGAATGCAGCTAGGACCACATGGTTTATAATGGGAATACTGAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CCA 90 bp | CCTTTATGTTGCAGGACCCAGTTGCAGTATGGATTTCAACAGTACTaGCATCTGAATCTTCAGACAAAATGCTCAGCACCTCATCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: PLCCRTQLQYGFQQY*HLNLQTKCSAPHQK Trigger: CTTCTGATGAGGTGCTGAGCATTTTGTCTGAAGATTCAGATGCCAGTACTGTTGAAATCCATACTGCAACTGGGTCCTGCAACATAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CAA 90 bp | GTGGAATTTGAAAGATCATACATACATTGTGGCAGCAAGAACACAATCCAAAACACAGCTGGATCCACATaGCGCTCCCCACACAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: VEFERSYIHCGSKNTIQNTAGST*RSPHRK Trigger: CTTTCTGTGTGGGGAGCGCAATGTGGATCCAGCTGT...GTTTTGGATTGTGTTCTTGCTGCCACAATGTATGTATGATCTTTCAAATTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CAA 90 bp | GAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTTTCTCCCAGTATAAAGGATCTTGTGAAACAGGATaGGGTTGGCCACCAGGACAA | + |
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Preference number: 5 (lower is better) Translates to: EGTFHLQVLMCCFSQYKGSCETG*GWPPGQ Trigger: TTGTCCTGGTGGCCAACCCAATCCTGTTTCACAAGA...TCCTTTATACTGGGAGAAACAACACATCAGAACTTGAAGATGGAAAGTTCCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CAA 90 bp | GAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTTTCTCCCAGTATAAAGGAAGACAAGAGAAGTCCTaGGGCTGGATTCAGTATTCC | + |
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Preference number: 5 (lower is better) Translates to: EGTFHLQVLMCCFSQYKGRQEKS*GWIQYS Trigger: GGAATACTGAATCCAGCCCAAGGACTTCTCTTGTCT...TCCTTTATACTGGGAGAAACAACACATCAGAACTTGAAGATGGAAAGTTCCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CCA 90 bp | GAAATGGAGTCAACTTCCTTTATGTTGCAGGACCCAGTTGCAGTATaGATTTCAACAGTACTGGCATCTGAATCTTCAGACAAAATGCTC | + |
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Preference number: 5 (lower is better) Translates to: EMESTSFMLQDPVAV*ISTVLASESSDKML Trigger: GAGCATTTTGTCTGAAGATTCAGATGCCAGTACTGTTGAAATCCATACTGCAACTGGGTCCTGCAACATAAAGGAAGTTGACTCCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CAA 90 bp | GTGGAATTTGAAAGATCATACATACATTGTGGCAGCAAGAACACAATCCAAAACTGTTGCAGGACCCAGTaGCAGTATGGATTTCAACAG | + |
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Preference number: 5 (lower is better) Translates to: VEFERSYIHCGSKNTIQNCCRTQ*QYGFQQ Trigger: CTGTTGAAATCCATACTGCAACTGGGTCCTGCAACA...GTTTTGGATTGTGTTCTTGCTGCCACAATGTATGTATGATCTTTCAAATTCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CAA 90 bp | ACCAGAGTGGAATTTGAAAGATCATACATACATTGTGGCAGCAAGAACACAATCCAGGCCAAATGTCTGTaGCATTCACATTGGAAATGT | + |
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Preference number: 5 (lower is better) Translates to: TRVEFERSYIHCGSKNTIQAKCL*HSHWKC Trigger: ACATTTCCAATGTGAATGCAACAGACATTTGGCCTG...GATTGTGTTCTTGCTGCCACAATGTATGTATGATCTTTCAAATTCCACTCTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS-3UTR CAA 90 bp | GTGATACTGACTGTTCTAGAGGGAACTTTCCATCTTCAAGTTCTGATGTGTTGTTCCATGGATATCTGGTaGCATTTCAAGGTAGAACAA | + |
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Preference number: 5 (lower is better) Translates to: VILTVLEGTFHLQVLMCCSMDIW*HFKVEQ Trigger: TTGTTCTACCTTGAAATGCAACCAGATATCCATGGA...ACAACACATCAGAACTTGAAGATGGAAAGTTCCCTCTAGAACAGTCAGTATCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS TCA 72 bp | CAAGTCACAGGCAGTGGCAGCACGGAGGATGTGGACTaGGGCGGCTGGGGATGTCGCAGGCGCCCTGTGACC | + |
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Preference number: 6 (lower is better) Translates to: QVTGSGSTEDVD*GGWGCRRRPVT Trigger: GGTCACAGGGCGCCTGCGACATCCCCAGCCGCCTCAGTCCACATCCTCCGTGCTGCCACTGCCTGTGACTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CCA 72 bp | CCAAGCAAGTCACAGGCAGTGGCAGCACGGAGGATGTaGACTGAGGCGGCTGGGGATGTCGCAGGCGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PSKSQAVAARRM*TEAAGDVAGAL Trigger: CAGGGCGCCTGCGACATCCCCAGCCGCCTCAGTCCACATCCTCCGTGCTGCCACTGCCTGTGACTTGCTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS GCA 72 bp | ATAGGAGCTGAAGGAGGCCAAGCACCAGGCGGAGAGTaGCGCTTCCCAGGCACAGGGCATGGAACACCCGCG | + |
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Preference number: 6 (lower is better) Translates to: IGAEGGQAPGGE*RFPGTGHGTPA Trigger: CGCGGGTGTTCCATGCCCTGTGCCTGGGAAGCGGCACTCTCCGCCTGGTGCTTGGCCTCCTTCAGCTCCTAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CCA 72 bp | CCGCTTCCCAGGCACAGGGCATGGAACACCCGCGGTTaGAAGCTTAGCACCAGCTGTGTGGCTGCGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PLPRHRAWNTRG*KLSTSCVAASH Trigger: GTGGGACGCAGCCACACAGCTGGTGCTAAGCTTCCAACCGCGGGTGTTCCATGCCCTGTGCCTGGGAAGCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CCA 72 bp | ACCAGGCGGAGAGTGCCGCTTCCCAGGCACAGGGCATaGAACACCCGCGGTTGGAAGCTTAGCACCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: TRRRVPLPRHRA*NTRGWKLSTSC Trigger: ACAGCTGGTGCTAAGCTTCCAACCGCGGGTGTTCCATGCCCTGTGCCTGGGAAGCGGCACTCTCCGCCTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CCA 72 bp | CCACTGAAGTCACTGTCTTGTGAAACAGGATTGGGTTaGCCACCAGGACAAGCAGAAGTGGCAAGTATGTGG | + |
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Preference number: 6 (lower is better) Translates to: PLKSLSCETGLG*PPGQAEVASMW Trigger: CCACATACTTGCCACTTCTGCTTGTCCTGGTGGCCAACCCAATCCTGTTTCACAAGACAGTGACTTCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CAA 72 bp | AAGAGGCCACTGAAGTCACTGTCTTGTGAAACAGGATaGGGTTGGCCACCAGGACAAGCAGAAGTGGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: KRPLKSLSCETG*GWPPGQAEVAS Trigger: ACTTGCCACTTCTGCTTGTCCTGGTGGCCAACCCAATCCTGTTTCACAAGACAGTGACTTCAGTGGCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CAA 90 bp | GCTGCATCCTGTCCAGCCATAGAAGGCCAGAGACAAGAGAAGTCCTaGGGCTGGATTCAGTATTCCCATTATAAACCATGTGGTCCTAGC | + |
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Preference number: 6 (lower is better) Translates to: AASCPAIEGQRQEKS*GWIQYSHYKPCGPS Trigger: GCTAGGACCACATGGTTTATAATGGGAATACTGAATCCAGCCCAAGGACTTCTCTTGTCTCTGGCCTTCTATGGCTGGACAGGATGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS TCA 72 bp | CCTTTCAGTAAAGAGGCCACTGAAGTCACTGTCTTGTaGAACAGGATTGGGTTGGCCACCAGGACAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PFSKEATEVTVL*NRIGLATRTSR Trigger: TCTGCTTGTCCTGGTGGCCAACCCAATCCTGTTTCACAAGACAGTGACTTCAGTGGCCTCTTTACTGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS GCA 72 bp | CCTGGGCTTGGGAAATGGAGTCAACTTCCTTTATGTTaGAGGACCCAGTTGCAGTATGGATTTCAACAGTAC | + |
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Preference number: 6 (lower is better) Translates to: PGLGKWSQLPLC*RTQLQYGFQQY Trigger: GTACTGTTGAAATCCATACTGCAACTGGGTCCTGCAACATAAAGGAAGTTGACTCCATTTCCCAAGCCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CCA 72 bp | GCCATAGAAGGCCAGAGACAAGAGAAGTCCTTGGGCTaGATTCAGTATTCCCATTATAAACCATGTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: AIEGQRQEKSLG*IQYSHYKPCGP Trigger: AGGACCACATGGTTTATAATGGGAATACTGAATCCAGCCCAAGGACTTCTCTTGTCTCTGGCCTTCTATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CAA 72 bp | CCCTGGGCTTGGGAAATGGAGTCAACTTCCTTTATGTaGCAGGACCCAGTTGCAGTATGGATTTCAACAGTA | + |
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Preference number: 6 (lower is better) Translates to: PWAWEMESTSFM*QDPVAVWISTV Trigger: TACTGTTGAAATCCATACTGCAACTGGGTCCTGCAACATAAAGGAAGTTGACTCCATTTCCCAAGCCCAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CAA 90 bp | GGGCTTGGGAAATGGAGTCAACTTCCTTTATGTTGCAGGACCCAGTaGCAGTATGGATTTCAACAGTACTGGCATCTGAATCTTCAGACA | + |
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Preference number: 6 (lower is better) Translates to: GLGKWSQLPLCCRTQ*QYGFQQYWHLNLQT Trigger: TGTCTGAAGATTCAGATGCCAGTACTGTTGAAATCCATACTGCAACTGGGTCCTGCAACATAAAGGAAGTTGACTCCATTTCCCAAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CCA 72 bp | ATTCCCATTATAAACCATGTGGTCCTAGCTGCATTCTaGATGCGTTTCAGAGAGCCTCCATGGATATCTGGT | + |
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Preference number: 6 (lower is better) Translates to: IPIINHVVLAAF*MRFREPPWISG Trigger: ACCAGATATCCATGGAGGCTCTCTGAAACGCATCCAGAATGCAGCTAGGACCACATGGTTTATAATGGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CAA 72 bp | TGTCCAGCCATAGAAGGCCAGAGACAAGAGAAGTCCTaGGGCTGGATTCAGTATTCCCATTATAAACCATGT | + |
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Preference number: 6 (lower is better) Translates to: CPAIEGQRQEKS*GWIQYSHYKPC Trigger: ACATGGTTTATAATGGGAATACTGAATCCAGCCCAAGGACTTCTCTTGTCTCTGGCCTTCTATGGCTGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS GCA 72 bp | ATTCAGTATTCCCATTATAAACCATGTGGTCCTAGCTaGATTCTGGATGCGTTTCAGAGAGCCTCCATGGAT | + |
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Preference number: 6 (lower is better) Translates to: IQYSHYKPCGPS*ILDAFQRASMD Trigger: ATCCATGGAGGCTCTCTGAAACGCATCCAGAATGCAGCTAGGACCACATGGTTTATAATGGGAATACTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CCA 72 bp | TGTTGCATTCACATTGGAAATGTTTTCAATGAACTCTaGGTAGGCTATCCACACTGTGGACCTGATAACGAT | + |
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Preference number: 6 (lower is better) Translates to: CCIHIGNVFNEL*VGYPHCGPDND Trigger: ATCGTTATCAGGTCCACAGTGTGGATAGCCTACCCAGAGTTCATTGAAAACATTTCCAATGTGAATGCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CAA 72 bp | CTGGATGCGTTTCAGAGAGCCTCCATGGATATCTGGTaGCATTTCAAGGTAGAACAAAAGACTTTCATTGAT | + |
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Preference number: 6 (lower is better) Translates to: LDAFQRASMDIW*HFKVEQKTFID Trigger: ATCAATGAAAGTCTTTTGTTCTACCTTGAAATGCAACCAGATATCCATGGAGGCTCTCTGAAACGCATCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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| CDS CAA 72 bp | AAATGGAGTCAACTTCCTTTATGTTGCAGGACCCAGTaGCAGTATGGATTTCAACAGTACTGGCATCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: KWSQLPLCCRTQ*QYGFQQYWHLN Trigger: ATTCAGATGCCAGTACTGTTGAAATCCATACTGCAACTGGGTCCTGCAACATAAAGGAAGTTGACTCCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026383.4 |
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