Pregenerated sensors for GPR141 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053101Ensembl transcript IDs: ENSMUST00000065335.3, ENSMUST00000222664.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAACTGCAACTCAAAGCCTAGGAGGGAAACCCAGGAAGTCACCATaGCCTAACAAAACTCCAGCACCCAGTAGACACATGTTTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: LTATQSLGGKPRKSP*PNKTPAPSRHMFSR Trigger: TCTGGAAAACATGTGTCTACTGGGTGCTGGAGTTTTGTTAGGGCATGGTGACTTCCTGGGTTTCCCTCCTAGGCTTTGAGTTGCAGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR CCA 90 bp | GTTTGGAGCCATGTGATAACCAGTATGATCCTTCAGAAGGTGGGGTaGAGTGGAACTAACTCTTCAGCTAACTGCAACTCAAAGCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: VWSHVITSMILQKVG*SGTNSSANCNSKPR Trigger: CCTAGGCTTTGAGTTGCAGTTAGCTGAAGAGTTAGTTCCACTCCACCCCACCTTCTGAAGGATCATACTGGTTATCACATGGCTCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR TCA 90 bp | ATTCCTTTTGTTTGGTTGGGCCAAGGCCAGGTTTCAATGAAGCAATaGAAAATCATTCTTAGCTCCTTGCTGATTCCAATTCCCAACAGG | + |
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Preference number: 1 (lower is better) Translates to: IPFVWLGQGQVSMKQ*KIILSSLLIPIPNR Trigger: CCTGTTGGGAATTGGAATCAGCAAGGAGCTAAGAATGATTTTTCATTGCTTCATTGAAACCTGGCCTTGGCCCAACCAAACAAAAGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR TCA 90 bp | TCAGTAACTGATGAAAAGTCTTTAAGATGTAAGCATATCCCTTCCTaGAATAAGAGCTCTCTTGACCTATCTGTTCTTCTACTCATACCA | + |
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Preference number: 1 (lower is better) Translates to: SVTDEKSLRCKHIPS*NKSSLDLSVLLLIP Trigger: TGGTATGAGTAGAAGAACAGATAGGTCAAGAGAGCTCTTATTTCAGGAAGGGATATGCTTACATCTTAAAGACTTTTCATCAGTTACTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR-3UTR CCA 90 bp | ATCCTTCAGAAGGTGGGGTGGAGTGGAACTAACTCTTCAGCTAACTGCAACTCATTTATTCCTTTTGTTTaGTTGGGCCAAGGCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: ILQKVGWSGTNSSANCNSFIPFV*LGQGQV Trigger: AACCTGGCCTTGGCCCAACCAAACAAAAGGAATAAA...TGAGTTGCAGTTAGCTGAAGAGTTAGTTCCACTCCACCCCACCTTCTGAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGGCATGCTCATTAGGCCTTCTCCATTACTTGGGTATCTTAGGAAGGTTACACAACTCATCTTTGCATaGACACCTTCCCACACAACA | + |
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Preference number: 2 (lower is better) Translates to: LGMLIRPSPLLGYLRKVTQLIFA*TPSHTT Trigger: TGTTGTGTGGGAAGGTGTCCATGCAAAGATGAGTTG...TGTAACCTTCCTAAGATACCCAAGTAATGGAGAAGGCCTAATGAGCATGCCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGACAAGTTGGAAATGGTCATGTATGCAGTGTGTTGGTACACATTCCCTTCTTCAGAAGGTGGGGTaGAGTGGAACTAACTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: KRTSWKWSCMQCVGTHSLLQKVG*SGTNSS Trigger: TGAAGAGTTAGTTCCACTCCACCCCACCTTCTGAAG...AAGGGAATGTGTACCAACACACTGCATACATGACCATTTCCAACTTGTCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR-3UTR GCA 90 bp | TTCAACTTTTCTGAAGCCTTAAGTCTGGACATGGCTCAGTTCCCTGAAAAGTTTAACTCTTCAGCTAACTaGAACTCAAAGCCTAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: FNFSEALSLDMAQFPEKFNSSAN*NSKPRR Trigger: CCTCCTAGGCTTTGAGTTGCAGTTAGCTGAAGAGTT...AAACTTTTCAGGGAACTGAGCCATGTCCAGACTTAAGGCTTCAGAAAAGTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR CAA 90 bp | ATGCAGTGTGTTGGTACACATTCCCTTAGGATGAGTTGTTATGCCTaGGTAATATCACTGAAAGTAGAATCCCATGGACTACTTCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: MQCVGTHSLRMSCYA*VISLKVESHGLLLV Trigger: GACAAGAAGTAGTCCATGGGATTCTACTTTCAGTGATATTACCAAGGCATAACAACTCATCCTAAGGGAATGTGTACCAACACACTGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR-3UTR TCA 90 bp | TTGGGCATGCTCATTAGGCCTTCTCCATTACTTGGGTATCTTAGGAAGGTTACAAAGGCCAGGTTTCAATaGAGCAATGAAAAATCATTC | + |
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Preference number: 2 (lower is better) Translates to: LGMLIRPSPLLGYLRKVTKARFQ*SNEKSF Trigger: GAATGATTTTTCATTGCTTCATTGAAACCTGGCCTT...TGTAACCTTCCTAAGATACCCAAGTAATGGAGAAGGCCTAATGAGCATGCCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGACAAGTTGGAAATGGTCATGTATGCAGTGTGTTGGTACACATTCCCTTCAGAGATTTTCTGTTTaGAGCCATGTGATAACCAGT | + |
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Preference number: 2 (lower is better) Translates to: KRTSWKWSCMQCVGTHSLQRFSV*SHVITS Trigger: ACTGGTTATCACATGGCTCCAAACAGAAAATCTCTG...AAGGGAATGTGTACCAACACACTGCATACATGACCATTTCCAACTTGTCCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR GCA 72 bp | ACTCAAAGCCTAGGAGGGAAACCCAGGAAGTCACCATaGCCTAACAAAACTCCAGCACCCAGTAGACACATG | + |
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Preference number: 3 (lower is better) Translates to: TQSLGGKPRKSP*PNKTPAPSRHM Trigger: CATGTGTCTACTGGGTGCTGGAGTTTTGTTAGGGCATGGTGACTTCCTGGGTTTCCCTCCTAGGCTTTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR GCA 72 bp | AAGGTGGGGTGGAGTGGAACTAACTCTTCAGCTAACTaGAACTCAAAGCCTAGGAGGGAAACCCAGGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: KVGWSGTNSSAN*NSKPRRETQEV Trigger: GACTTCCTGGGTTTCCCTCCTAGGCTTTGAGTTGCAGTTAGCTGAAGAGTTAGTTCCACTCCACCCCACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR CCA 72 bp | CATGTGATAACCAGTATGATCCTTCAGAAGGTGGGGTaGAGTGGAACTAACTCTTCAGCTAACTGCAACTCA | + |
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Preference number: 3 (lower is better) Translates to: HVITSMILQKVG*SGTNSSANCNS Trigger: TGAGTTGCAGTTAGCTGAAGAGTTAGTTCCACTCCACCCCACCTTCTGAAGGATCATACTGGTTATCACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR-3UTR CAA 90 bp | GAAAGTAGAATCCCATGGACTACTTCTTGTCCCTCACATGAAGTTGAAATCCATCACTACAACTCATCTTaGCATGGACACCTTCCCACA | + |
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Preference number: 3 (lower is better) Translates to: ESRIPWTTSCPSHEVEIHHYNSS*HGHLPT Trigger: TGTGGGAAGGTGTCCATGCAAAGATGAGTTGTAGTG...ATGGATTTCAACTTCATGTGAGGGACAAGAAGTAGTCCATGGGATTCTACTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR-3UTR CAA 90 bp | AGAATCCCATGGACTACTTCTTGTCCCTCACATGAAGTTGAAATCCATGGATCACATAGTTGTCCTGTATaGTATCACACAAGCCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: RIPWTTSCPSHEVEIHGSHSCPV*YHTSLG Trigger: CCCAAGGCTTGTGTGATACAATACAGGACAACTATG...TGATCCATGGATTTCAACTTCATGTGAGGGACAAGAAGTAGTCCATGGGATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR-3UTR CAA 90 bp | CAAATGCATGACTTTAGAAATGGAGTAAAACTTAAAGACTCCAGTGTGTCTTCCATTCCTTTTGTTTGGTaGGGCCAAGGCCAGGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: QMHDFRNGVKLKDSSVSSIPFVW*GQGQVS Trigger: TGAAACCTGGCCTTGGCCCAACCAAACAAAAGGAAT...GGAAGACACACTGGAGTCTTTAAGTTTTACTCCATTTCTAAAGTCATGCATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR-3UTR CAA 90 bp | AGAATCCCATGGACTACTTCTTGTCCCTCACATGAAGTTGAAATCCATGGATCAGAAATAAGAGCTCTCTaGACCTATCTGTTCTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: RIPWTTSCPSHEVEIHGSEIRAL*TYLFFY Trigger: GTAGAAGAACAGATAGGTCAAGAGAGCTCTTATTTC...TGATCCATGGATTTCAACTTCATGTGAGGGACAAGAAGTAGTCCATGGGATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR TCA 72 bp | AAGGTTACAATTAATTTAATTTTTGGAGAAAGAGGGTaGTGGATTACAGTGTGCTGCCAATCCTCAAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: KVTINLIFGERG*WITVCCQSSSP Trigger: AGGGCTTGAGGATTGGCAGCACACTGTAATCCATCACCCTCTTTCTCCAAAAATTAAATTAATTGTAACCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR CCA 72 bp | TTATGCCTTGGTAATATCACTGAAAGTAGAATCCCATaGACTACTTCTTGTCCCTCACATGAAGTTGAAATC | + |
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Preference number: 3 (lower is better) Translates to: LCLGNITESRIP*TTSCPSHEVEI Trigger: GATTTCAACTTCATGTGAGGGACAAGAAGTAGTCCATGGGATTCTACTTTCAGTGATATTACCAAGGCATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| 3UTR CCA 72 bp | AAGAGATGTGAGAATTTAAAGAGGACAAGTTGGAAATaGTCATGTATGCAGTGTGTTGGTACACATTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: KRCENLKRTSWK*SCMQCVGTHSL Trigger: AAGGGAATGTGTACCAACACACTGCATACATGACCATTTCCAACTTGTCCTCTTTAAATTCTCACATCTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR GCA 90 bp | TTGGGCATGCTCATTAGGCCTTCTCCATTACTTGGGTATCTTAGGAAGGTTACAAAGATTTTTCAGTTGTaGCCAGAACTCCTGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LGMLIRPSPLLGYLRKVTKIFQL*PELLVG Trigger: TCCCACCAGGAGTTCTGGGCACAACTGAAAAATCTT...TGTAACCTTCCTAAGATACCCAAGTAATGGAGAAGGCCTAATGAGCATGCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CCA 90 bp | ATCCTTCAGAAGGTGGGGTGGAGTGGAACTAACTCTTCAGCTAACTGCAACTCAAATGTGATGAAGACCTaGAAACCCAAGAGAATCAAC | + |
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Preference number: 4 (lower is better) Translates to: ILQKVGWSGTNSSANCNSNVMKT*KPKRIN Trigger: GTTGATTCTCTTGGGTTTCCAGGTCTTCATCACATT...TGAGTTGCAGTTAGCTGAAGAGTTAGTTCCACTCCACCCCACCTTCTGAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CCA 90 bp | CAAATGCATGACTTTAGAAATGGAGTAAAACTTAAAGACTCCAGTGTGTCTTCCGCCCAGAACTCCTGGTaGGATAGTAAGGAGTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: QMHDFRNGVKLKDSSVSSAQNSW*DSKEWR Trigger: TCGCCACTCCTTACTATCCCACCAGGAGTTCTGGGC...GGAAGACACACTGGAGTCTTTAAGTTTTACTCCATTTCTAAAGTCATGCATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CCA 90 bp | CAAATGCATGACTTTAGAAATGGAGTAAAACTTAAAGACTCCAGTGTGTCTTCCTGTGCCCAGAACTCCTaGTGGGATAGTAAGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: QMHDFRNGVKLKDSSVSSCAQNS*WDSKEW Trigger: CCACTCCTTACTATCCCACCAGGAGTTCTGGGCACA...GGAAGACACACTGGAGTCTTTAAGTTTTACTCCATTTCTAAAGTCATGCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CCA 90 bp | GGTGTTTCCTCCAAATTTAGAATGATACAGAAGTTTCTTGTTCCTCCAACTTTCTCACCAGAAGCCACATaGCAGAACTTGCAGCAACTG | + |
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Preference number: 4 (lower is better) Translates to: GVSSKFRMIQKFLVPPTFSPEAT*QNLQQL Trigger: CAGTTGCTGCAAGTTCTGCCATGTGGCTTCTGGTGA...GAAAGTTGGAGGAACAAGAAACTTCTGTATCATTCTAAATTTGGAGGAAACACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CCA 90 bp | TTGGGCATGCTCATTAGGCCTTCTCCATTACTTGGGTATCTTAGGAAGGTTACATGGCCAAGTTCTTTATaGAATCTAAAGCACTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LGMLIRPSPLLGYLRKVTWPSSL*NLKHCC Trigger: GCAACAGTGCTTTAGATTCCATAAAGAACTTGGCCA...TGTAACCTTCCTAAGATACCCAAGTAATGGAGAAGGCCTAATGAGCATGCCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CCA 90 bp | GGTGTTTCCTCCAAATTTAGAATGATACAGAAGTTTCTTGTTCCTCCAACTTTCTGGGATAGTAAGGAGTaGCGAAACTTCCGCACCATG | + |
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Preference number: 4 (lower is better) Translates to: GVSSKFRMIQKFLVPPTFWDSKE*RNFRTM Trigger: CATGGTGCGGAAGTTTCGCCACTCCTTACTATCCCA...GAAAGTTGGAGGAACAAGAAACTTCTGTATCATTCTAAATTTGGAGGAAACACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR TCA 90 bp | GGTGTTTCCTCCAAATTTAGAATGATACAGAAGTTTCTTGTTCCTCCAACTTTCTCGCTATTTCCATACTaGGAAACCACCAAGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: GVSSKFRMIQKFLVPPTFSLFPY*ETTKGT Trigger: TGTGCCCTTGGTGGTTTCTCAGTATGGAAATAGCGA...GAAAGTTGGAGGAACAAGAAACTTCTGTATCATTCTAAATTTGGAGGAAACACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR GCA 90 bp | TTCAACTTTTCTGAAGCCTTAAGTCTGGACATGGCTCAGTTCCCTGAAAAGTTTTGGCACTCACAAATTTaGAGAAGGGTAATCCAAACG | + |
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Preference number: 4 (lower is better) Translates to: FNFSEALSLDMAQFPEKFWHSQI*RRVIQT Trigger: CGTTTGGATTACCCTTCTGCAAATTTGTGAGTGCCA...AAACTTTTCAGGGAACTGAGCCATGTCCAGACTTAAGGCTTCAGAAAAGTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CCA 90 bp | GAAAGTAGAATCCCATGGACTACTTCTTGTCCCTCACATGAAGTTGAAATCCATAACGTGAGGTACATGTaGATATGTAACATGGCACTC | + |
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Preference number: 4 (lower is better) Translates to: ESRIPWTTSCPSHEVEIHNVRYM*ICNMAL Trigger: GAGTGCCATGTTACATATCCACATGTACCTCACGTT...ATGGATTTCAACTTCATGTGAGGGACAAGAAGTAGTCCATGGGATTCTACTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR TCA 90 bp | CAAATGCATGACTTTAGAAATGGAGTAAAACTTAAAGACTCCAGTGTGTCTTCCCGTAGAAGAGGAACGTaGGGTACATGTGGATATGTA | + |
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Preference number: 4 (lower is better) Translates to: QMHDFRNGVKLKDSSVSSRRRGT*GTCGYV Trigger: TACATATCCACATGTACCTCACGTTCCTCTTCTACG...GGAAGACACACTGGAGTCTTTAAGTTTTACTCCATTTCTAAAGTCATGCATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR GCA 90 bp | TTGGGCATGCTCATTAGGCCTTCTCCATTACTTGGGTATCTTAGGAAGGTTACAAGAACTTGCAGCAACTaGATGCAATTTTCTATAGAA | + |
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Preference number: 4 (lower is better) Translates to: LGMLIRPSPLLGYLRKVTRTCSN*MQFSIE Trigger: TTCTATAGAAAATTGCATGCAGTTGCTGCAAGTTCT...TGTAACCTTCCTAAGATACCCAAGTAATGGAGAAGGCCTAATGAGCATGCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CCA 90 bp | AAGAGGACAAGTTGGAAATGGTCATGTATGCAGTGTGTTGGTACACATTCCCTTTGTTTTTACAGCTCTTaGAATGTGCCACAACATACA | + |
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Preference number: 4 (lower is better) Translates to: KRTSWKWSCMQCVGTHSLCFYSS*NVPQHT Trigger: TGTATGTTGTGGCACATTCCAAGAGCTGTAAAAACA...AAGGGAATGTGTACCAACACACTGCATACATGACCATTTCCAACTTGTCCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR GCA 90 bp | AGAATCCCATGGACTACTTCTTGTCCCTCACATGAAGTTGAAATCCATGGATCAAATCTAAAGCACTGTTaGTCATTGTATTCTTCGCTA | + |
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Preference number: 4 (lower is better) Translates to: RIPWTTSCPSHEVEIHGSNLKHC*SLYSSL Trigger: TAGCGAAGAATACAATGAGCAACAGTGCTTTAGATT...TGATCCATGGATTTCAACTTCATGTGAGGGACAAGAAGTAGTCCATGGGATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR TCA 90 bp | CAAATGCATGACTTTAGAAATGGAGTAAAACTTAAAGACTCCAGTGTGTCTTCCACAAGTAATAAATCCTaGAGAACTGGTAGGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: QMHDFRNGVKLKDSSVSSTSNKS*RTGREE Trigger: TTCTTCCCTACCAGTTCTTCAGGATTTATTACTTGT...GGAAGACACACTGGAGTCTTTAAGTTTTACTCCATTTCTAAAGTCATGCATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR GCA 90 bp | GGTGTTTCCTCCAAATTTAGAATGATACAGAAGTTTCTTGTTCCTCCAACTTTCACAGCTCTTGGAATGTaGCACAACATACAAGTAATA | + |
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Preference number: 4 (lower is better) Translates to: GVSSKFRMIQKFLVPPTFTALGM*HNIQVI Trigger: TATTACTTGTATGTTGTGGCACATTCCAAGAGCTGT...GAAAGTTGGAGGAACAAGAAACTTCTGTATCATTCTAAATTTGGAGGAAACACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CCA 90 bp | GGTGTTTCCTCCAAATTTAGAATGATACAGAAGTTTCTTGTTCCTCCAACTTTCTGTGGATATGTAACATaGCACTCACAAATTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GVSSKFRMIQKFLVPPTFCGYVT*HSQICR Trigger: TCTGCAAATTTGTGAGTGCCATGTTACATATCCACA...GAAAGTTGGAGGAACAAGAAACTTCTGTATCATTCTAAATTTGGAGGAAACACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CCA 90 bp | CAAATGCATGACTTTAGAAATGGAGTAAAACTTAAAGACTCCAGTGTGTCTTCCTTTTGCTTAACCCAATaGCTTCCTCCAAAGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: QMHDFRNGVKLKDSSVSSFCLTQ*LPPKTK Trigger: TTTTGTCTTTGGAGGAAGCCATTGGGTTAAGCAAAA...GGAAGACACACTGGAGTCTTTAAGTTTTACTCCATTTCTAAAGTCATGCATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS TCA 90 bp | ATGAGGTATGCCAAGCGGAAAGGCACCGTCAGTAGGAAGACCCCATaGACCACCACGAGGTTGATGACAGCCATGGTGGTCACTGAACGT | + |
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Preference number: 5 (lower is better) Translates to: MRYAKRKGTVSRKTP*TTTRLMTAMVVTER Trigger: ACGTTCAGTGACCACCATGGCTGTCATCAACCTCGTGGTGGTTCATGGGGTCTTCCTACTGACGGTGCCTTTCCGCTTGGCATACCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065335.3 ENSMUST00000222664.2 |
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| CDS CCA 90 bp | AGATTTTTCAGTTGTGCCCAGAACTCCTGGTGGGATAGTAAGGAGTaGCGAAACTTCCGCACCATGGACAATGTGATGAAGACCTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: RFFSCAQNSWWDSKE*RNFRTMDNVMKTWK Trigger: TTTCCAGGTCTTCATCACATTGTCCATGGTGCGGAAGTTTCGCCACTCCTTACTATCCCACCAGGAGTTCTGGGCACAACTGAAAAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS CCA 90 bp | AAGGAGTGGCGAAACTTCCGCACCATGGACAATGTGATGAAGACCTaGAAACCCAAGAGAATCAACGCAACAGCTATGACAACAATGACT | + |
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Preference number: 5 (lower is better) Translates to: KEWRNFRTMDNVMKT*KPKRINATAMTTMT Trigger: AGTCATTGTTGTCATAGCTGTTGCGTTGATTCTCTTGGGTTTCCAGGTCTTCATCACATTGTCCATGGTGCGGAAGTTTCGCCACTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CAA 90 bp | AGAATCCCATGGACTACTTCTTGTCCCTCACATGAAGTTGAAATCCATGGATCAGCCACATGGCAGAACTaGCAGCAACTGCATGCAATT | + |
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Preference number: 5 (lower is better) Translates to: RIPWTTSCPSHEVEIHGSATWQN*QQLHAI Trigger: AATTGCATGCAGTTGCTGCAAGTTCTGCCATGTGGC...TGATCCATGGATTTCAACTTCATGTGAGGGACAAGAAGTAGTCCATGGGATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CAA 90 bp | TTGGGCATGCTCATTAGGCCTTCTCCATTACTTGGGTATCTTAGGAAGGTTACAGAATCTAAAGCACTGTaGCTCATTGTATTCTTCGCT | + |
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Preference number: 5 (lower is better) Translates to: LGMLIRPSPLLGYLRKVTESKAL*LIVFFA Trigger: AGCGAAGAATACAATGAGCAACAGTGCTTTAGATTC...TGTAACCTTCCTAAGATACCCAAGTAATGGAGAAGGCCTAATGAGCATGCCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CAA 90 bp | GAAAGTAGAATCCCATGGACTACTTCTTGTCCCTCACATGAAGTTGAAATCCATCATGTCGACAATCTTTaGCTTAACCCAATGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ESRIPWTTSCPSHEVEIHHVDNL*LNPMAS Trigger: GGAAGCCATTGGGTTAAGCAAAAGATTGTCGACATG...ATGGATTTCAACTTCATGTGAGGGACAAGAAGTAGTCCATGGGATTCTACTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS TCA 90 bp | AATCTAAAGCACTGTTGCTCATTGTATTCTTCGCTATTTCCATACTaGGAAACCACCAAGGGCACAACAATAACAATCACCAGAAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: NLKHCCSLYSSLFPY*ETTKGTTITITRSH Trigger: GTGGCTTCTGGTGATTGTTATTGTTGTGCCCTTGGTGGTTTCTCAGTATGGAAATAGCGAAGAATACAATGAGCAACAGTGCTTTAGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CAA 90 bp | GAAAGTAGAATCCCATGGACTACTTCTTGTCCCTCACATGAAGTTGAAATCCATACTTTGTCTCTACGCTaGAAGAAGATGAGGTATCTG | + |
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Preference number: 5 (lower is better) Translates to: ESRIPWTTSCPSHEVEIHTLSLR*KKMRYL Trigger: CAGATACCTCATCTTCTTCAAGCGTAGAGACAAAGT...ATGGATTTCAACTTCATGTGAGGGACAAGAAGTAGTCCATGGGATTCTACTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS-3UTR CAA 90 bp | GAAAGTAGAATCCCATGGACTACTTCTTGTCCCTCACATGAAGTTGAAATCCATTTGTTTTTACAGCTCTaGGAATGTGCCACAACATAC | + |
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Preference number: 5 (lower is better) Translates to: ESRIPWTTSCPSHEVEIHLFLQL*ECATTY Trigger: GTATGTTGTGGCACATTCCAAGAGCTGTAAAAACAA...ATGGATTTCAACTTCATGTGAGGGACAAGAAGTAGTCCATGGGATTCTACTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS TCA 72 bp | GCCAAGCGGAAAGGCACCGTCAGTAGGAAGACCCCATaGACCACCACGAGGTTGATGACAGCCATGGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: AKRKGTVSRKTP*TTTRLMTAMVV Trigger: GACCACCATGGCTGTCATCAACCTCGTGGTGGTTCATGGGGTCTTCCTACTGACGGTGCCTTTCCGCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065335.3 ENSMUST00000222664.2 |
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| CDS CCA 72 bp | AGTTGTGCCCAGAACTCCTGGTGGGATAGTAAGGAGTaGCGAAACTTCCGCACCATGGACAATGTGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: SCAQNSWWDSKE*RNFRTMDNVMK Trigger: CTTCATCACATTGTCCATGGTGCGGAAGTTTCGCCACTCCTTACTATCCCACCAGGAGTTCTGGGCACAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS CAA 90 bp | GCACTCACAAATTTGCAGAAGGGTAATCCAAACGTCCAAGTCCCTTaGATGAGGTATGCCAAGCGGAAAGGCACCGTCAGTAGGAAGACC | + |
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Preference number: 6 (lower is better) Translates to: ALTNLQKGNPNVQVP*MRYAKRKGTVSRKT Trigger: GGTCTTCCTACTGACGGTGCCTTTCCGCTTGGCATACCTCATCAAAGGGACTTGGACGTTTGGATTACCCTTCTGCAAATTTGTGAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065335.3 ENSMUST00000222664.2 |
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| CDS CAA 72 bp | AATTTGCAGAAGGGTAATCCAAACGTCCAAGTCCCTTaGATGAGGTATGCCAAGCGGAAAGGCACCGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: NLQKGNPNVQVP*MRYAKRKGTVS Trigger: ACTGACGGTGCCTTTCCGCTTGGCATACCTCATCAAAGGGACTTGGACGTTTGGATTACCCTTCTGCAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065335.3 ENSMUST00000222664.2 |
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| CDS CCA 72 bp | CGAAACTTCCGCACCATGGACAATGTGATGAAGACCTaGAAACCCAAGAGAATCAACGCAACAGCTATGACA | + |
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Preference number: 6 (lower is better) Translates to: RNFRTMDNVMKT*KPKRINATAMT Trigger: TGTCATAGCTGTTGCGTTGATTCTCTTGGGTTTCCAGGTCTTCATCACATTGTCCATGGTGCGGAAGTTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS GCA 72 bp | TGGCATAAGAGGCAATTCCACATGTCGACAATCTTTTaGTTAACCCAATGGCTTCCTCCAAAGACAAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: WHKRQFHMSTIF*LTQWLPPKTKS Trigger: GCTTTTTGTCTTTGGAGGAAGCCATTGGGTTAAGCAAAAGATTGTCGACATGTGGAATTGCCTCTTATGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS TCA 72 bp | CACTGTTGCTCATTGTATTCTTCGCTATTTCCATACTaGGAAACCACCAAGGGCACAACAATAACAATCACC | + |
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Preference number: 6 (lower is better) Translates to: HCCSLYSSLFPY*ETTKGTTITIT Trigger: GGTGATTGTTATTGTTGTGCCCTTGGTGGTTTCTCAGTATGGAAATAGCGAAGAATACAATGAGCAACAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS CAA 90 bp | TCGCACAGAATCATGGCCAAGTTCTTTATGGAATCTAAAGCACTGTaGCTCATTGTATTCTTCGCTATTTCCATACTGAGAAACCACCAA | + |
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Preference number: 6 (lower is better) Translates to: SHRIMAKFFMESKAL*LIVFFAISILRNHQ Trigger: TTGGTGGTTTCTCAGTATGGAAATAGCGAAGAATACAATGAGCAACAGTGCTTTAGATTCCATAAAGAACTTGGCCATGATTCTGTGCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS GCA 72 bp | AATCACCAGAAGCCACATGGCAGAACTTGCAGCAACTaGATGCAATTTTCTATAGAATTCTACTTTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: NHQKPHGRTCSN*MQFSIEFYFVS Trigger: AGAGACAAAGTAGAATTCTATAGAAAATTGCATGCAGTTGCTGCAAGTTCTGCCATGTGGCTTCTGGTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS CCA 72 bp | TTGATAACTCGCACAGAATCATGGCCAAGTTCTTTATaGAATCTAAAGCACTGTTGCTCATTGTATTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: LITRTESWPSSL*NLKHCCSLYSS Trigger: CGAAGAATACAATGAGCAACAGTGCTTTAGATTCCATAAAGAACTTGGCCATGATTCTGTGCGAGTTATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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| CDS CAA 72 bp | ATCATGGCCAAGTTCTTTATGGAATCTAAAGCACTGTaGCTCATTGTATTCTTCGCTATTTCCATACTGAGA | + |
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Preference number: 6 (lower is better) Translates to: IMAKFFMESKAL*LIVFFAISILR Trigger: TCTCAGTATGGAAATAGCGAAGAATACAATGAGCAACAGTGCTTTAGATTCCATAAAGAACTTGGCCATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065335.3 |
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