RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR137 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024958

Ensembl transcript IDs: ENSMUST00000025909.11, ENSMUST00000099774.10, ENSMUST00000099776.6, ENSMUST00000099782.10, ENSMUST00000166115.9, ENSMUST00000235237.2, ENSMUST00000235518.2, ENSMUST00000235881.2, ENSMUST00000236348.2, ENSMUST00000237934.2, ENSMUST00000238128.2, ENSMUST00000238183.2

Found 349 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCCCCTCCCCAGCCTGGCTCACGTCCGATGGCACCATACCAACTaGCAGAGCCCAGGCTGCCGGACATGCTGGTGCTCTCACTCCGGC +
Preference number: 1 (lower is better)
Translates to: WPLPSLAHVRWHHTN*QSPGCRTCWCSHSG
Trigger: GCCGGAGTGAGAGCACCAGCATGTCCGGCAGCCTGGGCTCTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAGGCTGGGGAGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR CCA 90 bp TGGTCCTCGTCTGGCTGGCCCCTCCCCAGCCTGGCTCACGTCCGATaGCACCATACCAACTGCCAGAGCCCAGGCTGCCGGACATGCTGG +
Preference number: 1 (lower is better)
Translates to: WSSSGWPLPSLAHVR*HHTNCQSPGCRTCW
Trigger: CCAGCATGTCCGGCAGCCTGGGCTCTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAGGCTGGGGAGGGGCCAGCCAGACGAGGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR GCA 90 bp CCAGAGCCCAGGCTGCCGGACATGCTGGTGCTCTCACTCCGGCTATaGTCCCAGGAGCAGCCCTCATCCTCACAGTGGCCAGCCCGGTCA +
Preference number: 1 (lower is better)
Translates to: PEPRLPDMLVLSLRL*SQEQPSSSQWPARS
Trigger: TGACCGGGCTGGCCACTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCCTGGGCTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR CCA 90 bp CCAGGTCCTGGCACCTGGGAGAAGAGCAGAGGAGTGGTCCTCGTCTaGCTGGCCCCTCCCCAGCCTGGCTCACGTCCGATGGCACCATAC +
Preference number: 1 (lower is better)
Translates to: PGPGTWEKSRGVVLV*LAPPQPGSRPMAPY
Trigger: GTATGGTGCCATCGGACGTGAGCCAGGCTGGGGAGGGGCCAGCCAGACGAGGACCACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR CCA 90 bp GAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACAGTCTCCTaGCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCC +
Preference number: 1 (lower is better)
Translates to: ERQGAGQRREAATVS*QPGQEAADVLGTGA
Trigger: GGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGCCAGGAGACTGTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR CCA 90 bp CTGCCTGACACACGCTGGTCCCCTTGGCCTCTAAGTAGATGCTGGTaGAAGGGGCTCGACGGGCCACAAGGCAGAGGCAGGCAGCAAGCG +
Preference number: 1 (lower is better)
Translates to: LPDTRWSPWPLSRCW*KGLDGPQGRGRQQA
Trigger: CGCTTGCTGCCTGCCTCTGCCTTGTGGCCCGTCGAGCCCCTTCCACCAGCATCTACTTAGAGGCCAAGGGGACCAGCGTGTGTCAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR CCA 90 bp CAGCTGCCTGACACACGCTGGTCCCCTTGGCCTCTAAGTAGATGCTaGTGGAAGGGGCTCGACGGGCCACAAGGCAGAGGCAGGCAGCAA +
Preference number: 1 (lower is better)
Translates to: QLPDTRWSPWPLSRC*WKGLDGPQGRGRQQ
Trigger: TTGCTGCCTGCCTCTGCCTTGTGGCCCGTCGAGCCCCTTCCACCAGCATCTACTTAGAGGCCAAGGGGACCAGCGTGTGTCAGGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR CCA 90 bp AGGAGCCGGCCAGAGGAGAGAAGCAGCCACAGTCTCCTGGCAACCTaGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCA +
Preference number: 1 (lower is better)
Translates to: RSRPEERSSHSLLAT*ARSSRRTWHRGQGS
Trigger: TGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGCCAGGAGACTGTGGCTGCTTCTCTCCTCTGGCCGGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR TCA 90 bp CCAGCAAGCCTCGGCTCATCTCTGGCCGACGCTTCGCCTTGGCCTTaGACACCACCTGGGAGCAGAGATACCCCATCACTCCTTTGGACC +
Preference number: 1 (lower is better)
Translates to: PASLGSSLADASPWP*TPPGSRDTPSLLWT
Trigger: GGTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR GCA 90 bp AGGAGAGGTAGCCGGCTCCAGTGTGGAAGCAGAGGTGGCAGGTCATaGCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCA +
Preference number: 1 (lower is better)
Translates to: RRGSRLQCGSRGGRS*QGTVGIWYPGALFP
Trigger: TGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTGCCACCTCTGCTTCCACACTGGAGCCGGCTACCTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR GCA 90 bp AGAGTCGCTCACCAGGACACGTACCAGCAGAAGGACCCAGGGCTGTaGCTGGCGCTGGCGAGACAGCACTGCACACAGTACATTCACCAG +
Preference number: 1 (lower is better)
Translates to: RVAHQDTYQQKDPGL*LALARQHCTQYIHQ
Trigger: CTGGTGAATGTACTGTGTGCAGTGCTGTCTCGCCAGCGCCAGGCACAGCCCTGGGTCCTTCTGCTGGTACGTGTCCTGGTGAGCGACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR CCA 90 bp TCGCTCACCAGGACACGTACCAGCAGAAGGACCCAGGGCTGTGCCTaGCGCTGGCGAGACAGCACTGCACACAGTACATTCACCAGCAAA +
Preference number: 1 (lower is better)
Translates to: SLTRTRTSRRTQGCA*RWRDSTAHSTFTSK
Trigger: TTTGCTGGTGAATGTACTGTGTGCAGTGCTGTCTCGCCAGCGCCAGGCACAGCCCTGGGTCCTTCTGCTGGTACGTGTCCTGGTGAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR TCA 90 bp CAGCCCGGTCAAAGAAGTAGGATCGGGAGCCAAAAACCTGCCCATTaGGGATTCGACTGGTGCTCAGATCCTGTGGGGGCCGGTGTACCC +
Preference number: 1 (lower is better)
Translates to: QPGQRSRIGSQKPAH*GFDWCSDPVGAGVP
Trigger: GGGTACACCGGCCCCCACAGGATCTGAGCACCAGTCGAATCCTCAATGGGCAGGTTTTTGGCTCCCGATCCTACTTCTTTGACCGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR TCA 90 bp GCGAGACAGCACTGCACACAGTACATTCACCAGCAAAAAGAGCAGTaGAGCACCCACGAAGGCCCCTCGGACAGCCAGCAAGCCTCGGCT +
Preference number: 1 (lower is better)
Translates to: ARQHCTQYIHQQKEQ*STHEGPSDSQQASA
Trigger: AGCCGAGGCTTGCTGGCTGTCCGAGGGGCCTTCGTGGGTGCTTCACTGCTCTTTTTGCTGGTGAATGTACTGTGTGCAGTGCTGTCTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR TCA 90 bp AGCCCACCAGCAATGTGGTGGGCAGCAGTTCCCAAACGAAGAGGATaGGACCAAACACCAGGTAGCCTTTGTTCCCTAGGTCATTCACCA +
Preference number: 1 (lower is better)
Translates to: SPPAMWWAAVPKRRG*DQTPGSLCSLGHSP
Trigger: TGGTGAATGACCTAGGGAACAAAGGCTACCTGGTGTTTGGTCTCATCCTCTTCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000238128.2
3UTR-3UTR GCA 90 bp TGTGGGGGCCGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGTGGCCAAGGCCAGAGCTaGCAGGTTGTAACAGGCCCG +
Preference number: 2 (lower is better)
Translates to: CGGRCTRKKPTSNVVGSSGQGQS*QVVTGP
Trigger: CGGGCCTGTTACAACCTGGCAGCTCTGGCCTTGGCC...ACTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCGGCCCCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000238128.2
3UTR-3UTR CCA 90 bp GCCGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGTTCCCAAATGGTCCTCGTCTGGCTaGCCCCTCCCCAGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: AGVPGRSPPAMWWAAVPKWSSSG*PLPSLA
Trigger: AGCCAGGCTGGGGAGGGGCCAGCCAGACGAGGACCA...TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp AACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGAGGAGTGGTCCTCGTCTaGCTGGCCCCTCCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: NLGKKQQTYLAQGPGIRGGVVLV*LAPPQP
Trigger: AGGCTGGGGAGGGGCCAGCCAGACGAGGACCACTCC...TCCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR TCA 90 bp CACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCACAGTGGCCAGCCCGGTCAGCAAAAAGAGCAGTaGAGCACCCACGAAGGCCCC +
Preference number: 2 (lower is better)
Translates to: HSGYAPRSSPHPHSGQPGQQKEQ*STHEGP
Trigger: GGGGCCTTCGTGGGTGCTTCACTGCTCTTTTTGCTG...ACCGGGCTGGCCACTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp TGCCAGAGCCCAGGCTGCCGGACATGCTGGTGCTCTCACTCCGGCTATGCTCCCGCAGCCACAGTCTCCTaGCAACCTGGGCAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: CQSPGCRTCWCSHSGYAPAATVS*QPGQEA
Trigger: TGCTTCTTGCCCAGGTTGCCAGGAGACTGTGGCTGC...GGGAGCATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCCTGGGCTCTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp GCCCAGGCTGCCGGACATGCTGGTGCTCTCACTCCGGCTATGCTCCCAGGAGCAGCAGCCACAGTCTCCTaGCAACCTGGGCAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: AQAAGHAGALTPAMLPGAAATVS*QPGQEA
Trigger: TGCTTCTTGCCCAGGTTGCCAGGAGACTGTGGCTGC...TGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp CTATGCTCCCAGGAGCAGCCCTCATCCTCACAGTGGCCAGCCCGGTCAAAGAAGGCCTCGGCTCATCTCTaGCCGACGCTTCGCCTTGGC +
Preference number: 2 (lower is better)
Translates to: LCSQEQPSSSQWPARSKKASAHL*PTLRLG
Trigger: GCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGC...CTTCTTTGACCGGGCTGGCCACTGTGAGGATGAGGGCTGCTCCTGGGAGCATAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR CAA 90 bp CGGACAGCCAGCAAGCCTCGGCTCATCTCTGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGGGAGCAGAGATACCCCATCACTCCT +
Preference number: 2 (lower is better)
Translates to: RTASKPRLISGRRFA*ALNTTWEQRYPITP
Trigger: AGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTGCTGGCTGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR-3UTR GCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGAGAGGTGGCAGGTCATaGCAGGGCACTGTGGGCATC +
Preference number: 2 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGRGGRS*QGTVGI
Trigger: GATGCCCACAGTGCCCTGGCATGACCTGCCACCTCT...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR GCA 90 bp ATTCGACTGGTGCTCAGATCCTGTGGGGGCCGGTGTACCCGGAAGAAGCCCACCAGAGGTGGCAGGTCATaGCAGGGCACTGTGGGCATC +
Preference number: 2 (lower is better)
Translates to: IRLVLRSCGGRCTRKKPTRGGRS*QGTVGI
Trigger: GATGCCCACAGTGCCCTGGCATGACCTGCCACCTCT...GGTGGGCTTCTTCCGGGTACACCGGCCCCCACAGGATCTGAGCACCAGTCGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR GCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAGGTGGCAGGTCATaGCAGGGCACTGTGGGCATC +
Preference number: 2 (lower is better)
Translates to: GGWHKLTTIGAARSRPEERGGRS*QGTVGI
Trigger: GATGCCCACAGTGCCCTGGCATGACCTGCCACCTCT...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR GCA 90 bp AACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGATGCCAGAGCCCAGGCTaGCGGACATGCTGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: NLGKKQQTYLAQGPGIRGCQSPG*RTCWCS
Trigger: AGAGCACCAGCATGTCCGGCAGCCTGGGCTCTGGCA...TCCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGGTGTGGAAGCAGAGGTaGCAGGTCATGCCAGGGCAC +
Preference number: 2 (lower is better)
Translates to: GGWHKLTTIGAARSRPEEVWKQR*QVMPGH
Trigger: GTGCCCTGGCATGACCTGCCACCTCTGCTTCCACAC...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGGTGTGGAAGCAGAGGTaGCAGGTCATGCCAGGGCAC +
Preference number: 2 (lower is better)
Translates to: QPGQEAADVLGTGARDQGVWKQR*QVMPGH
Trigger: GTGCCCTGGCATGACCTGCCACCTCTGCTTCCACAC...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGTGTGGAAGCAGAGGTaGCAGGTCATGCCAGGGCAC +
Preference number: 2 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGVWKQR*QVMPGH
Trigger: GTGCCCTGGCATGACCTGCCACCTCTGCTTCCACAC...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp CACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCACAGTGGCCAGCCCGGTAGCCCACCAGCAATGTaGTGGGCAGCAGTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: HSGYAPRSSPHPHSGQPGSPPAM*WAAVPK
Trigger: TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCT...ACCGGGCTGGCCACTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR CAA 90 bp GCCAGCAAGCCTCGGCTCATCTCTGGCCGACGCTTCGCCTTGGCCTaGAACACCACCTGGGAGCAGAGATACCCCATCACTCCTTTGGAC +
Preference number: 2 (lower is better)
Translates to: ASKPRLISGRRFALA*NTTWEQRYPITPLD
Trigger: GTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR-3UTR TCA 90 bp CTGTGGGGGCCGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGCCCAAACGAAGAGGATaGGACCAAACACCAGGTAGC +
Preference number: 2 (lower is better)
Translates to: LWGPVYPEEAHQQCGGQQPKRRG*DQTPGS
Trigger: GCTACCTGGTGTTTGGTCTCATCCTCTTCGTTTGGG...CTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCGGCCCCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000238128.2
3UTR-3UTR TCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGGCGAGAGGGCACAGATaGCGAAGAGAGAGTCGCTCA +
Preference number: 2 (lower is better)
Translates to: QPGQEAADVLGTGARDQGARGHR*RRESRS
Trigger: TGAGCGACTCTCTCTTCGTCATCTGTGCCCTCTCGC...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGCAGCCACAGTCTCCTaGCAACCTGGGCAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGAATVS*QPGQEA
Trigger: TGCTTCTTGCCCAGGTTGCCAGGAGACTGTGGCTGC...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp AACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGACATGCCAGGGCACTGTaGGCATCTGGTATCCTGGGG +
Preference number: 2 (lower is better)
Translates to: NLGKKQQTYLAQGPGIRGHARAL*ASGILG
Trigger: CCCCAGGATACCAGATGCCCACAGTGCCCTGGCATG...TCCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp GCTCTCACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCACAGTGGCCAGCCCACCAGCAATGTGGTaGGCAGCAGTTCCCAAACGA +
Preference number: 2 (lower is better)
Translates to: ALTPAMLPGAALILTVASPPAMW*AAVPKR
Trigger: TCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGG...GCTGGCCACTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp TCTCACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCACAGTGGCCAGCCCAGCCCACCAGCAATGTaGTGGGCAGCAGTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: SHSGYAPRSSPHPHSGQPSPPAM*WAAVPK
Trigger: TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCT...GGGCTGGCCACTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp ACATGCTGGTGCTCTCACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCACAGAAGAGCAGAGGAGTaGTCCTCGTCTGGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: TCWCSHSGYAPRSSPHPHRRAEE*SSSGWP
Trigger: GGGCCAGCCAGACGAGGACCACTCCTCTGCTCTTCT...GTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGGTGACTACCAGGTCCTaGCACCTGGGAGAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: GGWHKLTTIGAARSRPEEVTTRS*HLGEEQ
Trigger: CTGCTCTTCTCCCAGGTGCCAGGACCTGGTAGTCAC...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGCTGCCTGACACACGCTaGTCCCCTTGGCCTCTAAGT +
Preference number: 2 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGLPDTR*SPWPLS
Trigger: ACTTAGAGGCCAAGGGGACCAGCGTGTGTCAGGCAG...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR-3UTR TCA 90 bp TCACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCACAGTGGCCAGCCCGGCAAAAACCTGCCCATTaGGGATTCGACTGGTGCTCA +
Preference number: 2 (lower is better)
Translates to: SLRLCSQEQPSSSQWPARQKPAH*GFDWCS
Trigger: TGAGCACCAGTCGAATCCTCAATGGGCAGGTTTTTG...CCGGGCTGGCCACTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR TCA 90 bp CACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCACAGTGGCCAGCCCGGTCAAAAACCTGCCCATTaGGGATTCGACTGGTGCTCA +
Preference number: 2 (lower is better)
Translates to: HSGYAPRSSPHPHSGQPGQKPAH*GFDWCS
Trigger: TGAGCACCAGTCGAATCCTCAATGGGCAGGTTTTTG...ACCGGGCTGGCCACTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR GCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGAGAGGTGGCAGGTCATaGCAGGGCACTGTGGGCATC +
Preference number: 2 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQRGGRS*QGTVGI
Trigger: GATGCCCACAGTGCCCTGGCATGACCTGCCACCTCT...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGGGCACTGTGGGCATCTaGTATCCTGGGGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: QPGQEAADVLGTGARDQGGTVGI*YPGALF
Trigger: AAACAAGGCCCCAGGATACCAGATGCCCACAGTGCC...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGGCACTGTGGGCATCTaGTATCCTGGGGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGGTVGI*YPGALF
Trigger: AAACAAGGCCCCAGGATACCAGATGCCCACAGTGCC...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGCATGCCAGGGCACTGTaGGCATCTGGTATCCTGGGG +
Preference number: 2 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQHARAL*ASGILG
Trigger: CCCCAGGATACCAGATGCCCACAGTGCCCTGGCATG...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp GCAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATCATGCCAGGGCACTGTaGGCATCTGGTATCCTGGGG +
Preference number: 2 (lower is better)
Translates to: AGHARALWASGILGPCFHHARAL*ASGILG
Trigger: CCCCAGGATACCAGATGCCCACAGTGCCCTGGCATG...ATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp CGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGTTCCCAAACGCCCTCATCCTCACAGTaGCCAGCCCGGTCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: RCTRKKPTSNVVGSSSQTPSSSQ*PARSKK
Trigger: CTTCTTTGACCGGGCTGGCCACTGTGAGGATGAGGG...CGTTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp AACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGACTGGCTCACGTCCGATaGCACCATACCAACTGCCAG +
Preference number: 2 (lower is better)
Translates to: NLGKKQQTYLAQGPGIRGLAHVR*HHTNCQ
Trigger: CTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAG...TCCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp CGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGTTCCCAAACGGTGACTACCAGGTCCTaGCACCTGGGAGAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: RCTRKKPTSNVVGSSSQTVTTRS*HLGEEQ
Trigger: CTGCTCTTCTCCCAGGTGCCAGGACCTGGTAGTCAC...CGTTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp ACCAACTGCCAGAGCCCAGGCTGCCGGACATGCTGGTGCTCTCACTCCGGCTATTGTAACAGGCCCGGCTaGCATAGAGAAGGACCATGG +
Preference number: 2 (lower is better)
Translates to: TNCQSPGCRTCWCSHSGYCNRPG*HREGPW
Trigger: CCATGGTCCTTCTCTATGCCAGCCGGGCCTGTTACA...ATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCCTGGGCTCTGGCAGTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR GCA 90 bp ATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGTGCCAGAGCCCAGGCTaGCGGACATGCTGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: MPGHCGHLVSWGLVSILGCQSPG*RTCWCS
Trigger: AGAGCACCAGCATGTCCGGCAGCCTGGGCTCTGGCA...CCCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp GCAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATAGGGATCAGGGGAGCTaGGGCCTGGGTATTCTAAGG +
Preference number: 2 (lower is better)
Translates to: AGHARALWASGILGPCFHRDQGS*GLGILR
Trigger: CCTTAGAATACCCAGGCCCCAGCTCCCCTGATCCCT...ATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp CACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCAGGGATCAGGGGAGCTaGGGCCTGGGTATTCTAAGG +
Preference number: 2 (lower is better)
Translates to: HKLTTIGAARSRPEERSSRDQGS*GLGILR
Trigger: CCTTAGAATACCCAGGCCCCAGCTCCCCTGATCCCT...GCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCGCAGCCACAGTCTCCTaGCAACCTGGGCAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: WHKLTTIGAARSRPEERSAATVS*QPGQEA
Trigger: TGCTTCTTGCCCAGGTTGCCAGGAGACTGTGGCTGC...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp GGGAGGACAGGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCATGCCAGGGCACTGTaGGCATCTGGTATCCTGGGG +
Preference number: 2 (lower is better)
Translates to: GRTGHSLCLLSGRHRRGSHARAL*ASGILG
Trigger: CCCCAGGATACCAGATGCCCACAGTGCCCTGGCATG...GCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCCTGTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166115.9
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp GGGAGGACAGGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCGTGTGGAAGCAGAGGTaGCAGGTCATGCCAGGGCAC +
Preference number: 2 (lower is better)
Translates to: GRTGHSLCLLSGRHRRGSVWKQR*QVMPGH
Trigger: GTGCCCTGGCATGACCTGCCACCTCTGCTTCCACAC...GCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCCTGTCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166115.9
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp ATGCTGGTGCTCTCACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCACAGAGCCCACCAGCAATGTaGTGGGCAGCAGTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: MLVLSLRLCSQEQPSSSQSPPAM*WAAVPK
Trigger: TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCT...CTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGCTGGCTCACGTCCGATaGCACCATACCAACTGCCAG +
Preference number: 2 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQLAHVR*HHTNCQ
Trigger: CTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAG...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp GCCGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGTTCCCAAATGTAACAGGCCCGGCTaGCATAGAGAAGGACCATGG +
Preference number: 2 (lower is better)
Translates to: AGVPGRSPPAMWWAAVPKCNRPG*HREGPW
Trigger: CCATGGTCCTTCTCTATGCCAGCCGGGCCTGTTACA...TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000238128.2
3UTR-3UTR TCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGACAGCCTCTGTTTATTaGGTGGTAGGCACAGGAGAG +
Preference number: 2 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGTASVY*VVGTGE
Trigger: CTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGT...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR TCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGACAGCCTCTGTTTATTaGGTGGTAGGCACAGGAGAG +
Preference number: 2 (lower is better)
Translates to: QPGQEAADVLGTGARDQGTASVY*VVGTGE
Trigger: CTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGT...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR GCA 90 bp ATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGAGAGGTGGCAGGTCATaGCAGGGCACTGTGGGCATC +
Preference number: 2 (lower is better)
Translates to: MPGHCGHLVSWGLVSILGRGGRS*QGTVGI
Trigger: GATGCCCACAGTGCCCTGGCATGACCTGCCACCTCT...CCCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp CAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTAGGGATCAGGGGAGCTaGGGCCTGGGTATTCTAAGG +
Preference number: 2 (lower is better)
Translates to: QVMPGHCGHLVSWGLVSIRDQGS*GLGILR
Trigger: CCTTAGAATACCCAGGCCCCAGCTCCCCTGATCCCT...AATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp GGGAGGACAGGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCAGGGATCAGGGGAGCTaGGGCCTGGGTATTCTAAGG +
Preference number: 2 (lower is better)
Translates to: GRTGHSLCLLSGRHRRGSRDQGS*GLGILR
Trigger: CCTTAGAATACCCAGGCCCCAGCTCCCCTGATCCCT...GCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCCTGTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166115.9
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp CAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTGCAGCCACAGTCTCCTaGCAACCTGGGCAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: QVMPGHCGHLVSWGLVSIAATVS*QPGQEA
Trigger: TGCTTCTTGCCCAGGTTGCCAGGAGACTGTGGCTGC...AATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGGGCACTGTGGGCATCTaGTATCCTGGGGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQGTVGI*YPGALF
Trigger: AAACAAGGCCCCAGGATACCAGATGCCCACAGTGCC...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCGGCACTGTGGGCATCTaGTATCCTGGGGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: WHKLTTIGAARSRPEERSGTVGI*YPGALF
Trigger: AAACAAGGCCCCAGGATACCAGATGCCCACAGTGCC...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp ACACCAGGTAGCCTTTGTTCCCTAGGTCATTCACCAGATCTGCCTGGTCAGATATGGTCCTCGTCTGGCTaGCCCCTCCCCAGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: TPGSLCSLGHSPDLPGQIWSSSG*PLPSLA
Trigger: AGCCAGGCTGGGGAGGGGCCAGCCAGACGAGGACCA...TATCTGACCAGGCAGATCTGGTGAATGACCTAGGGAACAAAGGCTACCTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp CACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCTGTAACAGGCCCGGCTaGCATAGAGAAGGACCATGG +
Preference number: 2 (lower is better)
Translates to: HKLTTIGAARSRPEERSSCNRPG*HREGPW
Trigger: CCATGGTCCTTCTCTATGCCAGCCGGGCCTGTTACA...GCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR TCA 90 bp AACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGAACAGCCTCTGTTTATTaGGTGGTAGGCACAGGAGAG +
Preference number: 2 (lower is better)
Translates to: NLGKKQQTYLAQGPGIRGTASVY*VVGTGE
Trigger: CTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGT...TCCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp GGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGATCAGGGGAGCTaGGGCCTGGGTATTCTAAGG +
Preference number: 2 (lower is better)
Translates to: GHARALWASGILGPCFHFRDQGS*GLGILR
Trigger: CCTTAGAATACCCAGGCCCCAGCTCCCCTGATCCCT...AAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp AGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGTGTGGAGCAGCCACAGTCTCCTaGCAACCTGGGCAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: SLCLLSGRHRRGSRLQCGAATVS*QPGQEA
Trigger: TGCTTCTTGCCCAGGTTGCCAGGAGACTGTGGCTGC...TCCACACTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp GGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTGCAGCCACAGTCTCCTaGCAACCTGGGCAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: GHARALWASGILGPCFHFAATVS*QPGQEA
Trigger: TGCTTCTTGCCCAGGTTGCCAGGAGACTGTGGCTGC...AAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR TCA 90 bp GCAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATACAGCCTCTGTTTATTaGGTGGTAGGCACAGGAGAG +
Preference number: 2 (lower is better)
Translates to: AGHARALWASGILGPCFHTASVY*VVGTGE
Trigger: CTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGT...ATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp CATCCTCACAGTGGCCAGCCCGGTCAAAGAAGTAGGATCGGGAGCCAAAAACCTGGCACTGTGGGCATCTaGTATCCTGGGGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: HPHSGQPGQRSRIGSQKPGTVGI*YPGALF
Trigger: AAACAAGGCCCCAGGATACCAGATGCCCACAGTGCC...AGGTTTTTGGCTCCCGATCCTACTTCTTTGACCGGGCTGGCCACTGTGAGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp AGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGTGTGGAGGCACTGTGGGCATCTaGTATCCTGGGGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: SLCLLSGRHRRGSRLQCGGTVGI*YPGALF
Trigger: AAACAAGGCCCCAGGATACCAGATGCCCACAGTGCC...TCCACACTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp ATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGCCACCAGCAATGTGGTaGGCAGCAGTTCCCAAACGA +
Preference number: 2 (lower is better)
Translates to: MPGHCGHLVSWGLVSILGPPAMW*AAVPKR
Trigger: TCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGG...CCCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR GCA 90 bp ATGCTGGTGCTCTCACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCACAGGTCATTCACCAGATCTaGCTGGTCAGATACGTTGTA +
Preference number: 2 (lower is better)
Translates to: MLVLSLRLCSQEQPSSSQVIHQI*LVRYVV
Trigger: TACAACGTATCTGACCAGGCAGATCTGGTGAATGAC...CTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGTCCATTTTAGGGGGATaGCACAAGCTCACTACAATA +
Preference number: 2 (lower is better)
Translates to: GGWHKLTTIGAARSRPEESILGG*HKLTTI
Trigger: TATTGTAGTGAGCTTGTGCCATCCCCCTAAAATGGA...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGGGGCATCTGGTATCCTaGGGCCTTGTTTCCATTTTA +
Preference number: 2 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQGHLVS*GLVSIL
Trigger: TAAAATGGAAACAAGGCCCCAGGATACCAGATGCCC...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp ACCAGCAATGTGGTGGGCAGCAGTTCCCAAACGAAGAGGATGAGACCAAACACCAGCCCACCAGCAATGTaGTGGGCAGCAGTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: TSNVVGSSSQTKRMRPNTSPPAM*WAAVPK
Trigger: TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCT...GGTGTTTGGTCTCATCCTCTTCGTTTGGGAACTGCTGCCCACCACATTGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000238128.2
3UTR-3UTR CCA 90 bp AACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGATCCATTTTAGGGGGATaGCACAAGCTCACTACAATA +
Preference number: 2 (lower is better)
Translates to: NLGKKQQTYLAQGPGIRGSILGG*HKLTTI
Trigger: TATTGTAGTGAGCTTGTGCCATCCCCCTAAAATGGA...TCCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR GCA 90 bp GTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGTTCCCAAACGAAGAGTCATTCACCAGATCTaGCTGGTCAGATACGTTGTA +
Preference number: 2 (lower is better)
Translates to: VPGRSPPAMWWAAVPKRRVIHQI*LVRYVV
Trigger: TACAACGTATCTGACCAGGCAGATCTGGTGAATGAC...TCTTCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000238128.2
3UTR-3UTR CCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCTCCATTTTAGGGGGATaGCACAAGCTCACTACAATA +
Preference number: 2 (lower is better)
Translates to: WHKLTTIGAARSRPEERSSILGG*HKLTTI
Trigger: TATTGTAGTGAGCTTGTGCCATCCCCCTAAAATGGA...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGTCCATTTTAGGGGGATaGCACAAGCTCACTACAATA +
Preference number: 2 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQSILGG*HKLTTI
Trigger: TATTGTAGTGAGCTTGTGCCATCCCCCTAAAATGGA...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp ATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGGGGCATCTGGTATCCTaGGGCCTTGTTTCCATTTTA +
Preference number: 2 (lower is better)
Translates to: MPGHCGHLVSWGLVSILGGHLVS*GLVSIL
Trigger: TAAAATGGAAACAAGGCCCCAGGATACCAGATGCCC...CCCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CCA 90 bp CATCCTCACAGTGGCCAGCCCGGTCAAAGAAGTAGGATCGGGAGCCAAAAACCTTCCATTTTAGGGGGATaGCACAAGCTCACTACAATA +
Preference number: 2 (lower is better)
Translates to: HPHSGQPGQRSRIGSQKPSILGG*HKLTTI
Trigger: TATTGTAGTGAGCTTGTGCCATCCCCCTAAAATGGA...AGGTTTTTGGCTCCCGATCCTACTTCTTTGACCGGGCTGGCCACTGTGAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR CCA 72 bp TCTGGCTGGCCCCTCCCCAGCCTGGCTCACGTCCGATaGCACCATACCAACTGCCAGAGCCCAGGCTGCCGG +
Preference number: 3 (lower is better)
Translates to: SGWPLPSLAHVR*HHTNCQSPGCR
Trigger: CCGGCAGCCTGGGCTCTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAGGCTGGGGAGGGGCCAGCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CAA 90 bp CTCCCCAGCCTGGCTCACGTCCGATGGCACCATACCAACTGCCAGAGCCCAGGCCGCTTCGCCTTGGCCTaGAACACCACCTGGGAGCAG +
Preference number: 3 (lower is better)
Translates to: LPSLAHVRWHHTNCQSPGRFALA*NTTWEQ
Trigger: CTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCG...GCCTGGGCTCTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAGGCTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR GCA 72 bp CCCAGCCTGGCTCACGTCCGATGGCACCATACCAACTaGCAGAGCCCAGGCTGCCGGACATGCTGGTGCTCT +
Preference number: 3 (lower is better)
Translates to: PSLAHVRWHHTN*QSPGCRTCWCS
Trigger: AGAGCACCAGCATGTCCGGCAGCCTGGGCTCTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAGGCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR GCA 72 bp AGGCTGCCGGACATGCTGGTGCTCTCACTCCGGCTATaGTCCCAGGAGCAGCCCTCATCCTCACAGTGGCCA +
Preference number: 3 (lower is better)
Translates to: RLPDMLVLSLRL*SQEQPSSSQWP
Trigger: TGGCCACTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR CCA 72 bp ACACGCTGGTCCCCTTGGCCTCTAAGTAGATGCTGGTaGAAGGGGCTCGACGGGCCACAAGGCAGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: TRWSPWPLSRCW*KGLDGPQGRGR
Trigger: CCTGCCTCTGCCTTGTGGCCCGTCGAGCCCCTTCCACCAGCATCTACTTAGAGGCCAAGGGGACCAGCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR CCA 72 bp GACACACGCTGGTCCCCTTGGCCTCTAAGTAGATGCTaGTGGAAGGGGCTCGACGGGCCACAAGGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: DTRWSPWPLSRC*WKGLDGPQGRG
Trigger: GCCTCTGCCTTGTGGCCCGTCGAGCCCCTTCCACCAGCATCTACTTAGAGGCCAAGGGGACCAGCGTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR-3UTR CAA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGAAGCAGCAGACGTACTaGGCACAGGGGCCAGGGATC +
Preference number: 3 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGKQQTY*AQGPGI
Trigger: GATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTT...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CAA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAAGCAGCAGACGTACTaGGCACAGGGGCCAGGGATC +
Preference number: 3 (lower is better)
Translates to: GGWHKLTTIGAARSRPEEKQQTY*AQGPGI
Trigger: GATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTT...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CAA 90 bp ATGCTGGTGCTCTCACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCACAGAAGCAGCAGACGTACTaGGCACAGGGGCCAGGGATC +
Preference number: 3 (lower is better)
Translates to: MLVLSLRLCSQEQPSSSQKQQTY*AQGPGI
Trigger: GATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTT...CTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR-3UTR CAA 90 bp GGCTGCCGGACATGCTGGTGCTCTCACTCCGGCTATGCTCCCAGGAGCAGCCCTTTTGGACCATTGAGATaGCCCTCCTACTCCCACCAC +
Preference number: 3 (lower is better)
Translates to: GCRTCWCSHSGYAPRSSPFGPLR*PSYSHH
Trigger: GTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAA...AGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR TCA 72 bp CTCGGCTCATCTCTGGCCGACGCTTCGCCTTGGCCTTaGACACCACCTGGGAGCAGAGATACCCCATCACTC +
Preference number: 3 (lower is better)
Translates to: LGSSLADASPWP*TPPGSRDTPSL
Trigger: GAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR CCA 72 bp AGGACACGTACCAGCAGAAGGACCCAGGGCTGTGCCTaGCGCTGGCGAGACAGCACTGCACACAGTACATTC +
Preference number: 3 (lower is better)
Translates to: RTRTSRRTQGCA*RWRDSTAHSTF
Trigger: GAATGTACTGTGTGCAGTGCTGTCTCGCCAGCGCCAGGCACAGCCCTGGGTCCTTCTGCTGGTACGTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR-3UTR CAA 90 bp CCTCATCCTCACAGTGGCCAGCCCGGTCAAAGAAGTAGGATCGGGAGCCAAAAAGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGG +
Preference number: 3 (lower is better)
Translates to: PHPHSGQPGQRSRIGSQKGRRFA*ALNTTW
Trigger: CCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCC...TTTTTGGCTCCCGATCCTACTTCTTTGACCGGGCTGGCCACTGTGAGGATGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR-3UTR CAA 90 bp CAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTAAGCAGCAGACGTACTaGGCACAGGGGCCAGGGATC +
Preference number: 3 (lower is better)
Translates to: QVMPGHCGHLVSWGLVSIKQQTY*AQGPGI
Trigger: GATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTT...AATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CAA 90 bp AGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGTGTGGAAAGCAGCAGACGTACTaGGCACAGGGGCCAGGGATC +
Preference number: 3 (lower is better)
Translates to: SLCLLSGRHRRGSRLQCGKQQTY*AQGPGI
Trigger: GATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTT...TCCACACTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CAA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGCACAGCCTCTGTTTATaGAGTGGTAGGCACAGGAGA +
Preference number: 3 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGHSLCL*SGRHRR
Trigger: TCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTG...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CAA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGCACAGCCTCTGTTTATaGAGTGGTAGGCACAGGAGA +
Preference number: 3 (lower is better)
Translates to: QPGQEAADVLGTGARDQGHSLCL*SGRHRR
Trigger: TCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTG...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CAA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGCACAGCCTCTGTTTATaGAGTGGTAGGCACAGGAGA +
Preference number: 3 (lower is better)
Translates to: GGWHKLTTIGAARSRPEEHSLCL*SGRHRR
Trigger: TCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTG...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR-3UTR CAA 90 bp GGCCGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGTTCCCAACACAGCCTCTGTTTATaGAGTGGTAGGCACAGGAGA +
Preference number: 3 (lower is better)
Translates to: GRCTRKKPTSNVVGSSSQHSLCL*SGRHRR
Trigger: TCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTG...TTGGGAACTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR CCA 72 bp TCTGGCCGACGCTTCGCCTTGGCCTTGAACACCACCTaGGAGCAGAGATACCCCATCACTCCTTTGGACCAT +
Preference number: 3 (lower is better)
Translates to: SGRRFALALNTT*EQRYPITPLDH
Trigger: ATGGTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR TCA 72 bp TGGGAGCAGAGATACCCCATCACTCCTTTGGACCATTaGGATTGCCCTCCTACTCCCACCACACCGGTTCCC +
Preference number: 3 (lower is better)
Translates to: WEQRYPITPLDH*DCPPTPTTPVP
Trigger: GGGAACCGGTGTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAAGGAGTGATGGGGTATCTCTGCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR-3UTR CAA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGCACAGCCTCTGTTTATaGAGTGGTAGGCACAGGAGA +
Preference number: 3 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQHSLCL*SGRHRR
Trigger: TCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTG...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR TCA 72 bp CAAAGAAGTAGGATCGGGAGCCAAAAACCTGCCCATTaGGGATTCGACTGGTGCTCAGATCCTGTGGGGGCC +
Preference number: 3 (lower is better)
Translates to: QRSRIGSQKPAH*GFDWCSDPVGA
Trigger: GGCCCCCACAGGATCTGAGCACCAGTCGAATCCTCAATGGGCAGGTTTTTGGCTCCCGATCCTACTTCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR TCA 72 bp CACTGCACACAGTACATTCACCAGCAAAAAGAGCAGTaGAGCACCCACGAAGGCCCCTCGGACAGCCAGCAA +
Preference number: 3 (lower is better)
Translates to: HCTQYIHQQKEQ*STHEGPSDSQQ
Trigger: TTGCTGGCTGTCCGAGGGGCCTTCGTGGGTGCTTCACTGCTCTTTTTGCTGGTGAATGTACTGTGTGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
3UTR CCA 72 bp ACACCACCTGGGAGCAGAGATACCCCATCACTCCTTTaGACCATTGAGATTGCCCTCCTACTCCCACCACAC +
Preference number: 3 (lower is better)
Translates to: TPPGSRDTPSLL*TIEIALLLPPH
Trigger: GTGTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
CDS-3UTR GCA 90 bp CCTCCCCAGCCTGGCTCACGTCCGATGGCACCATACCAACTGCCAGAGCCCAGGAAGGACCCAGGGCTGTaGCTGGCGCTGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: PPQPGSRPMAPYQLPEPRKDPGL*LALARQ
Trigger: CTGTCTCGCCAGCGCCAGGCACAGCCCTGGGTCCTT...CCTGGGCTCTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAGGCTGGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR CCA 90 bp CTCCCCAGCCTGGCTCACGTCCGATGGCACCATACCAACTGCCAGAGCCCAGGCAGGGCCCCAGGCGGTTaGCCCTGGGAGTATCTCGGA +
Preference number: 4 (lower is better)
Translates to: LPSLAHVRWHHTNCQSPGRAPGG*PWEYLG
Trigger: TCCGAGATACTCCCAGGGCCAACCGCCTGGGGCCCT...GCCTGGGCTCTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAGGCTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR CCA 90 bp CCCAGGCTGCCGGACATGCTGGTGCTCTCACTCCGGCTATGCTCCCAGGAGCAGGCCTCGGCTCATCTCTaGCCGACGCTTCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PRLPDMLVLSLRLCSQEQASAHL*PTLRLG
Trigger: GCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGC...CTGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
CDS-3UTR CCA 90 bp GGCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGCCCCTCCCCAGCCTaGCTCACGTCCGATGGCACC +
Preference number: 4 (lower is better)
Translates to: GNLGKKQQTYLAQGPGIRGPSPA*LTSDGT
Trigger: GGTGCCATCGGACGTGAGCCAGGCTGGGGAGGGGCC...CCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GTGGGGGCCGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGTTAGGGCCCCAGGCGGTTaGCCCTGGGAGTATCTCGGA +
Preference number: 4 (lower is better)
Translates to: VGAGVPGRSPPAMWWAAVRAPGG*PWEYLG
Trigger: TCCGAGATACTCCCAGGGCCAACCGCCTGGGGCCCT...AACTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCGGCCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000238128.2
CDS-3UTR CCA 90 bp AACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGAGGCCCCTCCCCAGCCTaGCTCACGTCCGATGGCACC +
Preference number: 4 (lower is better)
Translates to: NLGKKQQTYLAQGPGIRGGPSPA*LTSDGT
Trigger: GGTGCCATCGGACGTGAGCCAGGCTGGGGAGGGGCC...TCCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGTGGTCCTCGTCTGGCTaGCCCCTCCCCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGWSSSG*PLPSLA
Trigger: AGCCAGGCTGGGGAGGGGCCAGCCAGACGAGGACCA...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGTGGTCCTCGTCTGGCTaGCCCCTCCCCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GGWHKLTTIGAARSRPEEWSSSG*PLPSLA
Trigger: AGCCAGGCTGGGGAGGGGCCAGCCAGACGAGGACCA...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGGGAGTGGTCCTCGTCTaGCTGGCCCCTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GGWHKLTTIGAARSRPEEGVVLV*LAPPQP
Trigger: AGGCTGGGGAGGGGCCAGCCAGACGAGGACCACTCC...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp CACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCACAGTGGCCAGCCCGGTTGTGGTACGCAAGGCTaGCCAGAGCAGACAGAGCGC +
Preference number: 4 (lower is better)
Translates to: HSGYAPRSSPHPHSGQPGCGTQG*PEQTER
Trigger: GCGCTCTGTCTGCTCTGGGCAGCCTTGCGTACCACA...ACCGGGCTGGCCACTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR GCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGAAGGACCCAGGGCTGTaGCTGGCGCTGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: QPGQEAADVLGTGARDQGKDPGL*LALARQ
Trigger: CTGTCTCGCCAGCGCCAGGCACAGCCCTGGGTCCTT...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGAAGGACCCAGGGCTGTaGCTGGCGCTGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGKDPGL*LALARQ
Trigger: CTGTCTCGCCAGCGCCAGGCACAGCCCTGGGTCCTT...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGAGGGCCCCAGGCGGTTaGCCCTGGGAGTATCTCGGA +
Preference number: 4 (lower is better)
Translates to: GNLGKKQQTYLAQGPGIRRAPGG*PWEYLG
Trigger: TCCGAGATACTCCCAGGGCCAACCGCCTGGGGCCCT...CCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR CCA 90 bp TCAGATCCTGTGGGGGCCGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGAGGGCCCCAGGCGGTTaGCCCTGGGAGTATCTCGGA +
Preference number: 4 (lower is better)
Translates to: SDPVGAGVPGRSPPAMWWRAPGG*PWEYLG
Trigger: TCCGAGATACTCCCAGGGCCAACCGCCTGGGGCCCT...CCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCGGCCCCCACAGGATCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR CCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGGGCCCCAGGCGGTTaGCCCTGGGAGTATCTCGGA +
Preference number: 4 (lower is better)
Translates to: GGWHKLTTIGAARSRPEERAPGG*PWEYLG
Trigger: TCCGAGATACTCCCAGGGCCAACCGCCTGGGGCCCT...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR CCA 90 bp CTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACAGTGGCCCCTCCCCAGCCTaGCTCACGTCCGATGGCACC +
Preference number: 4 (lower is better)
Translates to: LTTIGAARSRPEERSSHSGPSPA*LTSDGT
Trigger: GGTGCCATCGGACGTGAGCCAGGCTGGGGAGGGGCC...ACTGTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATGGCCCCTCCCCAGCCTaGCTCACGTCCGATGGCACC +
Preference number: 4 (lower is better)
Translates to: AGHARALWASGILGPCFHGPSPA*LTSDGT
Trigger: GGTGCCATCGGACGTGAGCCAGGCTGGGGAGGGGCC...ATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCGGCCCCTCCCCAGCCTaGCTCACGTCCGATGGCACC +
Preference number: 4 (lower is better)
Translates to: WHKLTTIGAARSRPEERSGPSPA*LTSDGT
Trigger: GGTGCCATCGGACGTGAGCCAGGCTGGGGAGGGGCC...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGGGCAGCAGAGGCCCCTaGAGCCCCACGGCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQGSRGP*SPTARL
Trigger: AAGGCGAGCCGTGGGGCTCCAGGGGCCTCTGCTGCC...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099782.10
ENSMUST00000235881.2
CDS-3UTR CCA 90 bp GCAGCCCTCATCCTCACAGTGGCCAGCCCGGTCAAAGAAGTAGGATCGGGAGCCGGCTGTGCCTGGCGCTaGCGAGACAGCAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: AALILTVASPVKEVGSGAGCAWR*RDSKAS
Trigger: CGAGGCTTTGCTGTCTCGCCAGCGCCAGGCACAGCC...GGCTCCCGATCCTACTTCTTTGACCGGGCTGGCCACTGTGAGGATGAGGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR TCA 90 bp GGCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGCCTATAGCAGCTGCCTaGCACACGCTGGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GNLGKKQQTYLAQGPGIRPIAAA*HTLVPC
Trigger: GCAGGGGACCAGCGTGTGTCAGGCAGCTGCTATAGG...CCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099776.6
CDS-3UTR GCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGCACTGTAGGCGGCAGTaGAGGTACCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGWHKLTTIGAARSRPEEHCRRQ*RYQPSC
Trigger: GCAGCTGGGCTGGTACCTGCACTGCCGCCTACAGTG...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR GCA 90 bp GCAGCCCTCATCCTCACAGTGGCCAGCCCGGTCAAAGAAGTAGGATCGGGAGCCCACTGTAGGCGGCAGTaGAGGTACCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AALILTVASPVKEVGSGAHCRRQ*RYQPSC
Trigger: GCAGCTGGGCTGGTACCTGCACTGCCGCCTACAGTG...GGCTCCCGATCCTACTTCTTTGACCGGGCTGGCCACTGTGAGGATGAGGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR GCA 90 bp AACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGAAAGGACCCAGGGCTGTaGCTGGCGCTGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: NLGKKQQTYLAQGPGIRGKDPGL*LALARQ
Trigger: CTGTCTCGCCAGCGCCAGGCACAGCCCTGGGTCCTT...TCCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGGGCCAAGGCCAGAGCTaGCAGGTTGTAACAGGCCCG +
Preference number: 4 (lower is better)
Translates to: QPGQEAADVLGTGARDQGGQGQS*QVVTGP
Trigger: CGGGCCTGTTACAACCTGGCAGCTCTGGCCTTGGCC...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp TCAGATCCTGTGGGGGCCGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGGCCAAGGCCAGAGCTaGCAGGTTGTAACAGGCCCG +
Preference number: 4 (lower is better)
Translates to: SDPVGAGVPGRSPPAMWWGQGQS*QVVTGP
Trigger: CGGGCCTGTTACAACCTGGCAGCTCTGGCCTTGGCC...CCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCGGCCCCCACAGGATCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR GCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGTGCCAGAGCCCAGGCTaGCGGACATGCTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: QPGQEAADVLGTGARDQGCQSPG*RTCWCS
Trigger: AGAGCACCAGCATGTCCGGCAGCCTGGGCTCTGGCA...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp AACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGAAGGGCCCCAGGCGGTTaGCCCTGGGAGTATCTCGGA +
Preference number: 4 (lower is better)
Translates to: NLGKKQQTYLAQGPGIRGRAPGG*PWEYLG
Trigger: TCCGAGATACTCCCAGGGCCAACCGCCTGGGGCCCT...TCCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR CCA 90 bp CATTTTAGGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCGGCCCCTCCCCAGCCTaGCTCACGTCCGATGGCACC +
Preference number: 4 (lower is better)
Translates to: HFRGMAQAHYNRSGKEPAGPSPA*LTSDGT
Trigger: GGTGCCATCGGACGTGAGCCAGGCTGGGGAGGGGCC...GGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCCTAAAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGTGGTCCTCGTCTGGCTaGCCCCTCCCCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AQAHYNRSGKEPARGEKQWSSSG*PLPSLA
Trigger: AGCCAGGCTGGGGAGGGGCCAGCCAGACGAGGACCA...CTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCTGGTCCTCGTCTGGCTaGCCCCTCCCCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: WHKLTTIGAARSRPEERSWSSSG*PLPSLA
Trigger: AGCCAGGCTGGGGAGGGGCCAGCCAGACGAGGACCA...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACAGTTGGTCCTCGTCTGGCTaGCCCCTCCCCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LTTIGAARSRPEERSSHSWSSSG*PLPSLA
Trigger: AGCCAGGCTGGGGAGGGGCCAGCCAGACGAGGACCA...ACTGTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCGGAGTGGTCCTCGTCTaGCTGGCCCCTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: WHKLTTIGAARSRPEERSGVVLV*LAPPQP
Trigger: AGGCTGGGGAGGGGCCAGCCAGACGAGGACCACTCC...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CTCCCCAGCCTGGCTCACGTCCGATGGCACCATACCAACTGCCAGAGCCCAGGCTCGGGAAGAAGGAGCTaGTCTTCCCATCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: LPSLAHVRWHHTNCQSPGSGRRS*SSHPGH
Trigger: GTGACCGGGATGGGAAGACCAGCTCCTTCTTCCCGA...GCCTGGGCTCTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAGGCTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235881.2
ENSMUST00000236348.2
CDS-3UTR GCA 90 bp ATGCTGGTGCTCTCACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCACAGCACTGTAGGCGGCAGTaGAGGTACCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: MLVLSLRLCSQEQPSSSQHCRRQ*RYQPSC
Trigger: GCAGCTGGGCTGGTACCTGCACTGCCGCCTACAGTG...CTGTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR GCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGTGTGGTACGCAAGGCTaGCCAGAGCAGACAGAGCGC +
Preference number: 4 (lower is better)
Translates to: QPGQEAADVLGTGARDQGCGTQG*PEQTER
Trigger: GCGCTCTGTCTGCTCTGGGCAGCCTTGCGTACCACA...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR GCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGCTCTCACTCCGGCTATaGTCCCAGGAGCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GGWHKLTTIGAARSRPEELSLRL*SQEQPS
Trigger: TGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAG...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGAGGGCCCCAGGCGGTTaGCCCTGGGAGTATCTCGGA +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQRAPGG*PWEYLG
Trigger: TCCGAGATACTCCCAGGGCCAACCGCCTGGGGCCCT...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGGCCTCGGCTCATCTCTaGCCGACGCTTCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQASAHL*PTLRLG
Trigger: GCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGC...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CTGTGGGGGCCGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGTGTAACAGGCCCGGCTaGCATAGAGAAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: LWGPVYPEEAHQQCGGQQCNRPG*HREGPW
Trigger: CCATGGTCCTTCTCTATGCCAGCCGGGCCTGTTACA...CTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCGGCCCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR CCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGGGCTGCCGGACATGCTaGTGCTCTCACTCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: GGWHKLTTIGAARSRPEEGCRTC*CSHSGY
Trigger: ATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCC...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGGCTGCCGGACATGCTaGTGCTCTCACTCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGGCRTC*CSHSGY
Trigger: ATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCC...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGGGCTGCCGGACATGCTaGTGCTCTCACTCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: QPGQEAADVLGTGARDQGGCRTC*CSHSGY
Trigger: ATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCC...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTGGTCCTCGTCTGGCTaGCCCCTCCCCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QVMPGHCGHLVSWGLVSIWSSSG*PLPSLA
Trigger: AGCCAGGCTGGGGAGGGGCCAGCCAGACGAGGACCA...AATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CATTTTAGGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCTGGTCCTCGTCTGGCTaGCCCCTCCCCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HFRGMAQAHYNRSGKEPAWSSSG*PLPSLA
Trigger: AGCCAGGCTGGGGAGGGGCCAGCCAGACGAGGACCA...GGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCCTAAAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGAGAAGAGCAGAGGAGTaGTCCTCGTCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GNLGKKQQTYLAQGPGIRRRAEE*SSSGWP
Trigger: GGGCCAGCCAGACGAGGACCACTCCTCTGCTCTTCT...CCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGAGCAGAGGAGTaGTCCTCGTCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GGWHKLTTIGAARSRPEERRAEE*SSSGWP
Trigger: GGGCCAGCCAGACGAGGACCACTCCTCTGCTCTTCT...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGCCAGGTCCTGGCACCTaGGAGAAGAGCAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGPGPGT*EKSRGV
Trigger: CACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCTGG...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGCCAGGTCCTGGCACCTaGGAGAAGAGCAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: QPGQEAADVLGTGARDQGPGPGT*EKSRGV
Trigger: CACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCTGG...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CTCATCCTCACAGTGGCCAGCCCGGTCAAAGAAGTAGGATCGGGAGCCAAAAACGGCAGCAGAGGCCCCTaGAGCCCCACGGCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: LILTVASPVKEVGSGAKNGSRGP*SPTARL
Trigger: AAGGCGAGCCGTGGGGCTCCAGGGGCCTCTGCTGCC...GTTTTTGGCTCCCGATCCTACTTCTTTGACCGGGCTGGCCACTGTGAGGATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000235881.2
3UTR CAA 72 bp AGCAAGCCTCGGCTCATCTCTGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGGGAGCAGAGATACCCC +
Preference number: 4 (lower is better)
Translates to: SKPRLISGRRFA*ALNTTWEQRYP
Trigger: GGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
CDS-3UTR TCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGCAGCAAAAAGAGCAGTaGAGCACCCACGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GGWHKLTTIGAARSRPEEQQKEQ*STHEGP
Trigger: GGGGCCTTCGTGGGTGCTTCACTGCTCTTTTTGCTG...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp GGCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGCAGCAAAAAGAGCAGTaGAGCACCCACGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GNLGKKQQTYLAQGPGIRQQKEQ*STHEGP
Trigger: GGGGCCTTCGTGGGTGCTTCACTGCTCTTTTTGCTG...CCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGGCGAGAGGGCACAGATaGCGAAGAGAGAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: GGWHKLTTIGAARSRPEEARGHR*RRESRS
Trigger: TGAGCGACTCTCTCTTCGTCATCTGTGCCCTCTCGC...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGCGAGAGGGCACAGATaGCGAAGAGAGAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGARGHR*RRESRS
Trigger: TGAGCGACTCTCTCTTCGTCATCTGTGCCCTCTCGC...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp GGCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGCGAGAGGGCACAGATaGCGAAGAGAGAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: GNLGKKQQTYLAQGPGIRARGHR*RRESRS
Trigger: TGAGCGACTCTCTCTTCGTCATCTGTGCCCTCTCGC...CCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp TGGTGCTCAGATCCTGTGGGGGCCGGTGTACCCGGAAGAAGCCCACCAGCAATGGCGAGAGGGCACAGATaGCGAAGAGAGAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: WCSDPVGAGVPGRSPPAMARGHR*RRESRS
Trigger: TGAGCGACTCTCTCTTCGTCATCTGTGCCCTCTCGC...CATTGCTGGTGGGCTTCTTCCGGGTACACCGGCCCCCACAGGATCTGAGCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR GCA 90 bp GCAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATCACTGTAGGCGGCAGTaGAGGTACCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGHARALWASGILGPCFHHCRRQ*RYQPSC
Trigger: GCAGCTGGGCTGGTACCTGCACTGCCGCCTACAGTG...ATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR GCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGCACTGTAGGCGGCAGTaGAGGTACCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQHCRRQ*RYQPSC
Trigger: GCAGCTGGGCTGGTACCTGCACTGCCGCCTACAGTG...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR GCA 90 bp ACATGCTGGTGCTCTCACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCACTGTGGTACGCAAGGCTaGCCAGAGCAGACAGAGCGC +
Preference number: 4 (lower is better)
Translates to: TCWCSHSGYAPRSSPHPHCGTQG*PEQTER
Trigger: GCGCTCTGTCTGCTCTGGGCAGCCTTGCGTACCACA...GTGAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR GCA 90 bp CATTTTAGGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAAGGACCCAGGGCTGTaGCTGGCGCTGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: HFRGMAQAHYNRSGKEPAKDPGL*LALARQ
Trigger: CTGTCTCGCCAGCGCCAGGCACAGCCCTGGGTCCTT...GGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCCTAAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp CAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTAAGGACCCAGGGCTGTaGCTGGCGCTGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: QVMPGHCGHLVSWGLVSIKDPGL*LALARQ
Trigger: CTGTCTCGCCAGCGCCAGGCACAGCCCTGGGTCCTT...AATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp CACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCGGCCAAGGCCAGAGCTaGCAGGTTGTAACAGGCCCG +
Preference number: 4 (lower is better)
Translates to: HKLTTIGAARSRPEERSSGQGQS*QVVTGP
Trigger: CGGGCCTGTTACAACCTGGCAGCTCTGGCCTTGGCC...GCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp GCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGTGCCAGAGCCCAGGCTaGCGGACATGCTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: AQAHYNRSGKEPARGEKQCQSPG*RTCWCS
Trigger: AGAGCACCAGCATGTCCGGCAGCCTGGGCTCTGGCA...CTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGCCAGGCGGTTGGCCCTaGGAGTATCTCGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: QPGQEAADVLGTGARDQGPGGWP*EYLGSR
Trigger: TCTACTTCCGAGATACTCCCAGGGCCAACCGCCTGG...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR CCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGCCAGGCGGTTGGCCCTaGGAGTATCTCGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: GGWHKLTTIGAARSRPEEPGGWP*EYLGSR
Trigger: TCTACTTCCGAGATACTCCCAGGGCCAACCGCCTGG...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR CCA 90 bp AGGGGCCAAGGCCAGAGCTGCCAGGTTGTAACAGGCCCGGCTGGCATAGAGAAGCCAGGCGGTTGGCCCTaGGAGTATCTCGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: RGQGQSCQVVTGPAGIEKPGGWP*EYLGSR
Trigger: TCTACTTCCGAGATACTCCCAGGGCCAACCGCCTGG...CTTCTCTATGCCAGCCGGGCCTGTTACAACCTGGCAGCTCTGGCCTTGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238128.2
CDS-3UTR CCA 90 bp CATTTTAGGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCGCCTCGGCTCATCTCTaGCCGACGCTTCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: HFRGMAQAHYNRSGKEPAASAHL*PTLRLG
Trigger: GCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGC...GGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCCTAAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGCCCTCATCCTCACAGTaGCCAGCCCGGTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: QPGQEAADVLGTGARDQGPSSSQ*PARSKK
Trigger: CTTCTTTGACCGGGCTGGCCACTGTGAGGATGAGGG...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGCTGGCTCACGTCCGATaGCACCATACCAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGLAHVR*HHTNCQ
Trigger: CTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAG...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGCTGGCTCACGTCCGATaGCACCATACCAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: GNLGKKQQTYLAQGPGIRLAHVR*HHTNCQ
Trigger: CTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAG...CCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp ATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGGGAGTGGTCCTCGTCTaGCTGGCCCCTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: MPGHCGHLVSWGLVSILGGVVLV*LAPPQP
Trigger: AGGCTGGGGAGGGGCCAGCCAGACGAGGACCACTCC...CCCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp AGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGTGTGGAGGAGTGGTCCTCGTCTaGCTGGCCCCTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLCLLSGRHRRGSRLQCGGVVLV*LAPPQP
Trigger: AGGCTGGGGAGGGGCCAGCCAGACGAGGACCACTCC...TCCACACTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGGAGTGGTCCTCGTCTaGCTGGCCCCTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: HARALWASGILGPCFHFRGVVLV*LAPPQP
Trigger: AGGCTGGGGAGGGGCCAGCCAGACGAGGACCACTCC...CCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGGTGACTACCAGGTCCTaGCACCTGGGAGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QPGQEAADVLGTGARDQGVTTRS*HLGEEQ
Trigger: CTGCTCTTCTCCCAGGTGCCAGGACCTGGTAGTCAC...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGTGACTACCAGGTCCTaGCACCTGGGAGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGVTTRS*HLGEEQ
Trigger: CTGCTCTTCTCCCAGGTGCCAGGACCTGGTAGTCAC...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
3UTR CAA 72 bp CCTCGGCTCATCTCTGGCCGACGCTTCGCCTTGGCCTaGAACACCACCTGGGAGCAGAGATACCCCATCACT +
Preference number: 4 (lower is better)
Translates to: PRLISGRRFALA*NTTWEQRYPIT
Trigger: AGTGATGGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
CDS-3UTR TCA 90 bp CAGGCTGCCGGACATGCTGGTGCTCTCACTCCGGCTATGCTCCCAGGAGCAGCCATACTGTCTGATAGCTaGGGCGCTTGTGCCCATACA +
Preference number: 4 (lower is better)
Translates to: QAAGHAGALTPAMLPGAAILSDS*GACAHT
Trigger: TGTATGGGCACAAGCGCCTCAGCTATCAGACAGTAT...GGCTGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR GCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCTGTGGTACGCAAGGCTaGCCAGAGCAGACAGAGCGC +
Preference number: 4 (lower is better)
Translates to: WHKLTTIGAARSRPEERSCGTQG*PEQTER
Trigger: GCGCTCTGTCTGCTCTGGGCAGCCTTGCGTACCACA...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR GCA 90 bp GCCCACCAGCAATGTGGTGGGCAGCAGTTCCCAAACGAAGAGGATGAGACCAAAAAGGACCCAGGGCTGTaGCTGGCGCTGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: AHQQCGGQQFPNEEDETKKDPGL*LALARQ
Trigger: CTGTCTCGCCAGCGCCAGGCACAGCCCTGGGTCCTT...TTTGGTCTCATCCTCTTCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR GCA 90 bp CAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTGGCCAAGGCCAGAGCTaGCAGGTTGTAACAGGCCCG +
Preference number: 4 (lower is better)
Translates to: QVMPGHCGHLVSWGLVSIGQGQS*QVVTGP
Trigger: CGGGCCTGTTACAACCTGGCAGCTCTGGCCTTGGCC...AATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCCTCTCACTCCGGCTATaGTCCCAGGAGCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: WHKLTTIGAARSRPEERSLSLRL*SQEQPS
Trigger: TGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAG...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp CACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCTCTCACTCCGGCTATaGTCCCAGGAGCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: HKLTTIGAARSRPEERSSLSLRL*SQEQPS
Trigger: TGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAG...GCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGCTCTCACTCCGGCTATaGTCCCAGGAGCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQLSLRL*SQEQPS
Trigger: TGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAG...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTGCCTCGGCTCATCTCTaGCCGACGCTTCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GHARALWASGILGPCFHFASAHL*PTLRLG
Trigger: GCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGC...AAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp ATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGGCCTCGGCTCATCTCTaGCCGACGCTTCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: MPGHCGHLVSWGLVSILGASAHL*PTLRLG
Trigger: GCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGC...CCCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCCGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGTTCCCAAACTGCCTGACACACGCTaGTCCCCTTGGCCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: AGVPGRSPPAMWWAAVPKLPDTR*SPWPLS
Trigger: ACTTAGAGGCCAAGGGGACCAGCGTGTGTCAGGCAG...TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR CCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGTGTAACAGGCCCGGCTaGCATAGAGAAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGCNRPG*HREGPW
Trigger: CCATGGTCCTTCTCTATGCCAGCCGGGCCTGTTACA...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGCCACCAGCAATGTGGTaGGCAGCAGTTCCCAAACGA +
Preference number: 4 (lower is better)
Translates to: QPGQEAADVLGTGARDQGPPAMW*AAVPKR
Trigger: TCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGG...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGCCACCAGCAATGTGGTaGGCAGCAGTTCCCAAACGA +
Preference number: 4 (lower is better)
Translates to: GNLGKKQQTYLAQGPGIRPPAMW*AAVPKR
Trigger: TCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGG...CCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGAGCCCACCAGCAATGTaGTGGGCAGCAGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: QPGQEAADVLGTGARDQGSPPAM*WAAVPK
Trigger: TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCT...CCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGAGAAGAGCAGAGGAGTaGTCCTCGTCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AQAHYNRSGKEPARGEKQRRAEE*SSSGWP
Trigger: GGGCCAGCCAGACGAGGACCACTCCTCTGCTCTTCT...CTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGAAGAGCAGAGGAGTaGTCCTCGTCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: WHKLTTIGAARSRPEERSRRAEE*SSSGWP
Trigger: GGGCCAGCCAGACGAGGACCACTCCTCTGCTCTTCT...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCCCAGGTCCTGGCACCTaGGAGAAGAGCAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: WHKLTTIGAARSRPEERSPGPGT*EKSRGV
Trigger: CACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCTGG...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGCCAGGTCCTGGCACCTaGGAGAAGAGCAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQPGPGT*EKSRGV
Trigger: CACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCTGG...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCCAGGTCCTGGCACCTaGGAGAAGAGCAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: HKLTTIGAARSRPEERSSPGPGT*EKSRGV
Trigger: CACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCTGG...GCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CTCATCCTCACAGTGGCCAGCCCGGTCAAAGAAGTAGGATCGGGAGCCAAAAACGGCTGTGCCTGGCGCTaGCGAGACAGCAAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: LILTVASPVKEVGSGAKNGCAWR*RDSKAS
Trigger: CGAGGCTTTGCTGTCTCGCCAGCGCCAGGCACAGCC...GTTTTTGGCTCCCGATCCTACTTCTTTGACCGGGCTGGCCACTGTGAGGATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR TCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCCAGCAAAAAGAGCAGTaGAGCACCCACGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: WHKLTTIGAARSRPEERSQQKEQ*STHEGP
Trigger: GGGGCCTTCGTGGGTGCTTCACTGCTCTTTTTGCTG...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp CTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACAGTCAGCAAAAAGAGCAGTaGAGCACCCACGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LTTIGAARSRPEERSSHSQQKEQ*STHEGP
Trigger: GGGGCCTTCGTGGGTGCTTCACTGCTCTTTTTGCTG...ACTGTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp CTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACAGTGCGAGAGGGCACAGATaGCGAAGAGAGAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: LTTIGAARSRPEERSSHSARGHR*RRESRS
Trigger: TGAGCGACTCTCTCTTCGTCATCTGTGCCCTCTCGC...ACTGTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGGCGAGAGGGCACAGATaGCGAAGAGAGAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQARGHR*RRESRS
Trigger: TGAGCGACTCTCTCTTCGTCATCTGTGCCCTCTCGC...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp AAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACGCGAGAGGGCACAGATaGCGAAGAGAGAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: KLTTIGAARSRPEERSSHARGHR*RRESRS
Trigger: TGAGCGACTCTCTCTTCGTCATCTGTGCCCTCTCGC...GTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGCCCAAACGAAGAGGATaGGACCAAACACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGPKRRG*DQTPGS
Trigger: GCTACCTGGTGTTTGGTCTCATCCTCTTCGTTTGGG...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp GGCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGCCCAAACGAAGAGGATaGGACCAAACACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GNLGKKQQTYLAQGPGIRPKRRG*DQTPGS
Trigger: GCTACCTGGTGTTTGGTCTCATCCTCTTCGTTTGGG...CCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp TACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGTTCCCAAACGAAGAGTGTGGTACGCAAGGCTaGCCAGAGCAGACAGAGCGC +
Preference number: 4 (lower is better)
Translates to: YPEEAHQQCGGQQFPNEECGTQG*PEQTER
Trigger: GCGCTCTGTCTGCTCTGGGCAGCCTTGCGTACCACA...CTCTTCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000238128.2
CDS-3UTR GCA 90 bp ATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGGGCCAAGGCCAGAGCTaGCAGGTTGTAACAGGCCCG +
Preference number: 4 (lower is better)
Translates to: MPGHCGHLVSWGLVSILGGQGQS*QVVTGP
Trigger: CGGGCCTGTTACAACCTGGCAGCTCTGGCCTTGGCC...CCCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp GCCCACCAGCAATGTGGTGGGCAGCAGTTCCCAAACGAAGAGGATGAGACCAAAGGCCAAGGCCAGAGCTaGCAGGTTGTAACAGGCCCG +
Preference number: 4 (lower is better)
Translates to: AHQQCGGQQFPNEEDETKGQGQS*QVVTGP
Trigger: CGGGCCTGTTACAACCTGGCAGCTCTGGCCTTGGCC...TTTGGTCTCATCCTCTTCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR GCA 90 bp CATTTTAGGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCCTCTCACTCCGGCTATaGTCCCAGGAGCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: HFRGMAQAHYNRSGKEPALSLRL*SQEQPS
Trigger: TGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAG...GGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCCTAAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp AGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGTGTGGATGCCAGAGCCCAGGCTaGCGGACATGCTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SLCLLSGRHRRGSRLQCGCQSPG*RTCWCS
Trigger: AGAGCACCAGCATGTCCGGCAGCCTGGGCTCTGGCA...TCCACACTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp GGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTTGCCAGAGCCCAGGCTaGCGGACATGCTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GHARALWASGILGPCFHFCQSPG*RTCWCS
Trigger: AGAGCACCAGCATGTCCGGCAGCCTGGGCTCTGGCA...AAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp CATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGTGCCAGAGCCCAGGCTaGCGGACATGCTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: HARALWASGILGPCFHFRCQSPG*RTCWCS
Trigger: AGAGCACCAGCATGTCCGGCAGCCTGGGCTCTGGCA...CCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACAGTCCAGGCGGTTGGCCCTaGGAGTATCTCGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: LTTIGAARSRPEERSSHSPGGWP*EYLGSR
Trigger: TCTACTTCCGAGATACTCCCAGGGCCAACCGCCTGG...ACTGTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR CCA 90 bp CAGCAATGTGGTGGGCAGCAGTTCCCAAACGAAGAGGATGAGACCAAACACCAGGCCTCGGCTCATCTCTaGCCGACGCTTCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: QQCGGQQFPNEEDETKHQASAHL*PTLRLG
Trigger: GCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGC...CTGGTGTTTGGTCTCATCCTCTTCGTTTGGGAACTGCTGCCCACCACATTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000238128.2
CDS-3UTR CCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCCTGCCTGACACACGCTaGTCCCCTTGGCCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: WHKLTTIGAARSRPEERSLPDTR*SPWPLS
Trigger: ACTTAGAGGCCAAGGGGACCAGCGTGTGTCAGGCAG...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGCTGCCTGACACACGCTaGTCCCCTTGGCCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQLPDTR*SPWPLS
Trigger: ACTTAGAGGCCAAGGGGACCAGCGTGTGTCAGGCAG...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp AAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACCTGCCTGACACACGCTaGTCCCCTTGGCCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: KLTTIGAARSRPEERSSHLPDTR*SPWPLS
Trigger: ACTTAGAGGCCAAGGGGACCAGCGTGTGTCAGGCAG...GTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp AACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGAAGCCCACCAGCAATGTaGTGGGCAGCAGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: NLGKKQQTYLAQGPGIRGSPPAM*WAAVPK
Trigger: TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCT...TCCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATCCCTCATCCTCACAGTaGCCAGCCCGGTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: AGHARALWASGILGPCFHPSSSQ*PARSKK
Trigger: CTTCTTTGACCGGGCTGGCCACTGTGAGGATGAGGG...ATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCCCCTCATCCTCACAGTaGCCAGCCCGGTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: WHKLTTIGAARSRPEERSPSSSQ*PARSKK
Trigger: CTTCTTTGACCGGGCTGGCCACTGTGAGGATGAGGG...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGCCCTCATCCTCACAGTaGCCAGCCCGGTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQPSSSQ*PARSKK
Trigger: CTTCTTTGACCGGGCTGGCCACTGTGAGGATGAGGG...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp AAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACCTGGCTCACGTCCGATaGCACCATACCAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: KLTTIGAARSRPEERSSHLAHVR*HHTNCQ
Trigger: CTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAG...GTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACAGTCTGGCTCACGTCCGATaGCACCATACCAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LTTIGAARSRPEERSSHSLAHVR*HHTNCQ
Trigger: CTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAG...ACTGTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTAGAAGAGCAGAGGAGTaGTCCTCGTCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QVMPGHCGHLVSWGLVSIRRAEE*SSSGWP
Trigger: GGGCCAGCCAGACGAGGACCACTCCTCTGCTCTTCT...AATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGGAGGACAGGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCCAGGTCCTGGCACCTaGGAGAAGAGCAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: GRTGHSLCLLSGRHRRGSPGPGT*EKSRGV
Trigger: CACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCTGG...GCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCCTGTCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166115.9
CDS-3UTR CCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCGTGACTACCAGGTCCTaGCACCTGGGAGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: WHKLTTIGAARSRPEERSVTTRS*HLGEEQ
Trigger: CTGCTCTTCTCCCAGGTGCCAGGACCTGGTAGTCAC...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGGTGACTACCAGGTCCTaGCACCTGGGAGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQVTTRS*HLGEEQ
Trigger: CTGCTCTTCTCCCAGGTGCCAGGACCTGGTAGTCAC...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACAGTTCGGGAAGAAGGAGCTaGTCTTCCCATCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: LTTIGAARSRPEERSSHSSGRRS*SSHPGH
Trigger: GTGACCGGGATGGGAAGACCAGCTCCTTCTTCCCGA...ACTGTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099782.10
ENSMUST00000235881.2
ENSMUST00000236348.2
CDS-3UTR TCA 90 bp GGCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGCAAAAACCTGCCCATTaGGGATTCGACTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GNLGKKQQTYLAQGPGIRQKPAH*GFDWCS
Trigger: TGAGCACCAGTCGAATCCTCAATGGGCAGGTTTTTG...CCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGCAAAAACCTGCCCATTaGGGATTCGACTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GGWHKLTTIGAARSRPEEQKPAH*GFDWCS
Trigger: TGAGCACCAGTCGAATCCTCAATGGGCAGGTTTTTG...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp ATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGTGTGGTACGCAAGGCTaGCCAGAGCAGACAGAGCGC +
Preference number: 4 (lower is better)
Translates to: MPGHCGHLVSWGLVSILGCGTQG*PEQTER
Trigger: GCGCTCTGTCTGCTCTGGGCAGCCTTGCGTACCACA...CCCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR GCA 90 bp GGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTTGTGGTACGCAAGGCTaGCCAGAGCAGACAGAGCGC +
Preference number: 4 (lower is better)
Translates to: GHARALWASGILGPCFHFCGTQG*PEQTER
Trigger: GCGCTCTGTCTGCTCTGGGCAGCCTTGCGTACCACA...AAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR GCA 90 bp GGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTCTCTCACTCCGGCTATaGTCCCAGGAGCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GHARALWASGILGPCFHFLSLRL*SQEQPS
Trigger: TGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAG...AAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGAGAAGGAGAAAAGTGTaGTACGCAAGGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ATWARSSRRTWHRGQGSGRRRKV*YARLPR
Trigger: TCTGGGCAGCCTTGCGTACCACACTTTTCTCCTTCT...CCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR CCA 90 bp GGCAACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGAGAAGGAGAAAAGTGTaGTACGCAAGGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GNLGKKQQTYLAQGPGIRRRRKV*YARLPR
Trigger: TCTGGGCAGCCTTGCGTACCACACTTTTCTCCTTCT...CCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR CCA 90 bp TGGTGCTCAGATCCTGTGGGGGCCGGTGTACCCGGAAGAAGCCCACCAGCAATGAGAAGGAGAAAAGTGTaGTACGCAAGGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: WCSDPVGAGVPGRSPPAMRRRKV*YARLPR
Trigger: TCTGGGCAGCCTTGCGTACCACACTTTTCTCCTTCT...CATTGCTGGTGGGCTTCTTCCGGGTACACCGGCCCCCACAGGATCTGAGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR CCA 90 bp GGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGGAGAAAAGTGTaGTACGCAAGGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GGWHKLTTIGAARSRPEERRRKV*YARLPR
Trigger: TCTGGGCAGCCTTGCGTACCACACTTTTCTCCTTCT...CTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR CCA 90 bp CCAGGTAGCCTTTGTTCCCTAGGTCATTCACCAGATCTGCCTGGTCAGATACGTGCCTCGGCTCATCTCTaGCCGACGCTTCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PGSLCSLGHSPDLPGQIRASAHL*PTLRLG
Trigger: GCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGC...ACGTATCTGACCAGGCAGATCTGGTGAATGACCTAGGGAACAAAGGCTACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235881.2
ENSMUST00000238128.2
CDS-3UTR CCA 90 bp GTGGCCAGCCCGGTCAAAGAAGTAGGATCGGGAGCCAAAAACCTGCCCATTGAGCTGCCTGACACACGCTaGTCCCCTTGGCCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: VASPVKEVGSGAKNLPIELPDTR*SPWPLS
Trigger: ACTTAGAGGCCAAGGGGACCAGCGTGTGTCAGGCAG...CTCAATGGGCAGGTTTTTGGCTCCCGATCCTACTTCTTTGACCGGGCTGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR CCA 90 bp CTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACAGTTGTAACAGGCCCGGCTaGCATAGAGAAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: LTTIGAARSRPEERSSHSCNRPG*HREGPW
Trigger: CCATGGTCCTTCTCTATGCCAGCCGGGCCTGTTACA...ACTGTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp AAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACTGTAACAGGCCCGGCTaGCATAGAGAAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: KLTTIGAARSRPEERSSHCNRPG*HREGPW
Trigger: CCATGGTCCTTCTCTATGCCAGCCGGGCCTGTTACA...GTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTGTAACAGGCCCGGCTaGCATAGAGAAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: AGHARALWASGILGPCFHCNRPG*HREGPW
Trigger: CCATGGTCCTTCTCTATGCCAGCCGGGCCTGTTACA...ATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGCCACCAGCAATGTGGTaGGCAGCAGTTCCCAAACGA +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQPPAMW*AAVPKR
Trigger: TCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGG...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATCCACCAGCAATGTGGTaGGCAGCAGTTCCCAAACGA +
Preference number: 4 (lower is better)
Translates to: AGHARALWASGILGPCFHPPAMW*AAVPKR
Trigger: TCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGG...ATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCCACCAGCAATGTGGTaGGCAGCAGTTCCCAAACGA +
Preference number: 4 (lower is better)
Translates to: HKLTTIGAARSRPEERSSPPAMW*AAVPKR
Trigger: TCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGG...GCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GCAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATAGCCCACCAGCAATGTaGTGGGCAGCAGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: AGHARALWASGILGPCFHSPPAM*WAAVPK
Trigger: TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCT...ATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGAGCCCACCAGCAATGTaGTGGGCAGCAGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQSPPAM*WAAVPK
Trigger: TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCT...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp AAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACAGCCCACCAGCAATGTaGTGGGCAGCAGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: KLTTIGAARSRPEERSSHSPPAM*WAAVPK
Trigger: TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCT...GTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGGCTGCCGGACATGCTaGTGCTCTCACTCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: HARALWASGILGPCFHFRGCRTC*CSHSGY
Trigger: ATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCC...CCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp AGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGTGTGGAGGCTGCCGGACATGCTaGTGCTCTCACTCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: SLCLLSGRHRRGSRLQCGGCRTC*CSHSGY
Trigger: ATAGCCGGAGTGAGAGCACCAGCATGTCCGGCAGCC...TCCACACTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTCTGGCTCACGTCCGATaGCACCATACCAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: QVMPGHCGHLVSWGLVSILAHVR*HHTNCQ
Trigger: CTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAG...AATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGCCAGGTCCTGGCACCTaGGAGAAGAGCAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: HARALWASGILGPCFHFRPGPGT*EKSRGV
Trigger: CACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCTGG...CCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGCCCAAACGAAGAGGATaGGACCAAACACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQPKRRG*DQTPGS
Trigger: GCTACCTGGTGTTTGGTCTCATCCTCTTCGTTTGGG...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCCCCAAACGAAGAGGATaGGACCAAACACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: WHKLTTIGAARSRPEERSPKRRG*DQTPGS
Trigger: GCTACCTGGTGTTTGGTCTCATCCTCTTCGTTTGGG...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp AAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACCCCAAACGAAGAGGATaGGACCAAACACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: KLTTIGAARSRPEERSSHPKRRG*DQTPGS
Trigger: GCTACCTGGTGTTTGGTCTCATCCTCTTCGTTTGGG...GTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp AACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGACAAAAACCTGCCCATTaGGGATTCGACTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: NLGKKQQTYLAQGPGIRGQKPAH*GFDWCS
Trigger: TGAGCACCAGTCGAATCCTCAATGGGCAGGTTTTTG...TCCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGCCAGGCGGTTGGCCCTaGGAGTATCTCGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: HARALWASGILGPCFHFRPGGWP*EYLGSR
Trigger: TCTACTTCCGAGATACTCCCAGGGCCAACCGCCTGG...CCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR CCA 90 bp CATCCTCACAGTGGCCAGCCCGGTCAAAGAAGTAGGATCGGGAGCCAAAAACCTCCAGGCGGTTGGCCCTaGGAGTATCTCGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: HPHSGQPGQRSRIGSQKPPGGWP*EYLGSR
Trigger: TCTACTTCCGAGATACTCCCAGGGCCAACCGCCTGG...AGGTTTTTGGCTCCCGATCCTACTTCTTTGACCGGGCTGGCCACTGTGAGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR CCA 90 bp AGCCTTTGTTCCCTAGGTCATTCACCAGATCTGCCTGGTCAGATACGTTGTACCGCCTCGGCTCATCTCTaGCCGACGCTTCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SLCSLGHSPDLPGQIRCTASAHL*PTLRLG
Trigger: GCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGC...GGTACAACGTATCTGACCAGGCAGATCTGGTGAATGACCTAGGGAACAAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235881.2
ENSMUST00000238128.2
CDS-3UTR CCA 90 bp GGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTCTGCCTGACACACGCTaGTCCCCTTGGCCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: GHARALWASGILGPCFHFLPDTR*SPWPLS
Trigger: ACTTAGAGGCCAAGGGGACCAGCGTGTGTCAGGCAG...AAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGCTGCCTGACACACGCTaGTCCCCTTGGCCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: HARALWASGILGPCFHFRLPDTR*SPWPLS
Trigger: ACTTAGAGGCCAAGGGGACCAGCGTGTGTCAGGCAG...CCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CATTTTAGGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGCCCACCAGCAATGTaGTGGGCAGCAGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: HFRGMAQAHYNRSGKEPASPPAM*WAAVPK
Trigger: TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCT...GGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCCTAAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTAGCCCACCAGCAATGTaGTGGGCAGCAGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: QVMPGHCGHLVSWGLVSISPPAM*WAAVPK
Trigger: TTTGGGAACTGCTGCCCACCACATTGCTGGTGGGCT...AATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp AGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGTGTGGACCCTCATCCTCACAGTaGCCAGCCCGGTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SLCLLSGRHRRGSRLQCGPSSSQ*PARSKK
Trigger: CTTCTTTGACCGGGCTGGCCACTGTGAGGATGAGGG...TCCACACTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp ATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGCTGGCTCACGTCCGATaGCACCATACCAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: MPGHCGHLVSWGLVSILGLAHVR*HHTNCQ
Trigger: CTGGCAGTTGGTATGGTGCCATCGGACGTGAGCCAG...CCCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTGTGACTACCAGGTCCTaGCACCTGGGAGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GHARALWASGILGPCFHFVTTRS*HLGEEQ
Trigger: CTGCTCTTCTCCCAGGTGCCAGGACCTGGTAGTCAC...AAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp ATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGGTGACTACCAGGTCCTaGCACCTGGGAGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: MPGHCGHLVSWGLVSILGVTTRS*HLGEEQ
Trigger: CTGCTCTTCTCCCAGGTGCCAGGACCTGGTAGTCAC...CCCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTTCGGGAAGAAGGAGCTaGTCTTCCCATCCCGGTCAC +
Preference number: 4 (lower is better)
Translates to: GHARALWASGILGPCFHFSGRRS*SSHPGH
Trigger: GTGACCGGGATGGGAAGACCAGCTCCTTCTTCCCGA...AAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000099782.10
ENSMUST00000235881.2
ENSMUST00000236348.2
3UTR CAA 72 bp CTGGGAGCAGAGATACCCCATCACTCCTTTGGACCATaGAGATTGCCCTCCTACTCCCACCACACCGGTTCC +
Preference number: 4 (lower is better)
Translates to: LGAEIPHHSFGP*RLPSYSHHTGS
Trigger: GGAACCGGTGTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236348.2
CDS-3UTR TCA 90 bp GCAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATATACTGTCTGATAGCTaGGGCGCTTGTGCCCATACA +
Preference number: 4 (lower is better)
Translates to: AGHARALWASGILGPCFHILSDS*GACAHT
Trigger: TGTATGGGCACAAGCGCCTCAGCTATCAGACAGTAT...ATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR TCA 90 bp AAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACATACTGTCTGATAGCTaGGGCGCTTGTGCCCATACA +
Preference number: 4 (lower is better)
Translates to: KLTTIGAARSRPEERSSHILSDS*GACAHT
Trigger: TGTATGGGCACAAGCGCCTCAGCTATCAGACAGTAT...GTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR TCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGCAAAAACCTGCCCATTaGGGATTCGACTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQQKPAH*GFDWCS
Trigger: TGAGCACCAGTCGAATCCTCAATGGGCAGGTTTTTG...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp GAAGTAGGATCGGGAGCCAAAAACCTGCCCATTGAGGATTCGACTGGTGCTCAGCCAGGCGGTTGGCCCTaGGAGTATCTCGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: EVGSGAKNLPIEDSTGAQPGGWP*EYLGSR
Trigger: TCTACTTCCGAGATACTCCCAGGGCCAACCGCCTGG...CTGAGCACCAGTCGAATCCTCAATGGGCAGGTTTTTGGCTCCCGATCCTACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR CCA 90 bp GGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTTGTAACAGGCCCGGCTaGCATAGAGAAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: GHARALWASGILGPCFHFCNRPG*HREGPW
Trigger: CCATGGTCCTTCTCTATGCCAGCCGGGCCTGTTACA...AAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp ATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGTGTAACAGGCCCGGCTaGCATAGAGAAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: MPGHCGHLVSWGLVSILGCNRPG*HREGPW
Trigger: CCATGGTCCTTCTCTATGCCAGCCGGGCCTGTTACA...CCCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp AGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGTGTGGATGTAACAGGCCCGGCTaGCATAGAGAAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: SLCLLSGRHRRGSRLQCGCNRPG*HREGPW
Trigger: CCATGGTCCTTCTCTATGCCAGCCGGGCCTGTTACA...TCCACACTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp TCGGGAGCCAAAAACCTGCCCATTGAGGATTCGACTGGTGCTCAGATCCTGTGGTGTAACAGGCCCGGCTaGCATAGAGAAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: SGAKNLPIEDSTGAQILWCNRPG*HREGPW
Trigger: CCATGGTCCTTCTCTATGCCAGCCGGGCCTGTTACA...CCACAGGATCTGAGCACCAGTCGAATCCTCAATGGGCAGGTTTTTGGCTCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR CCA 90 bp GGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTCCACCAGCAATGTGGTaGGCAGCAGTTCCCAAACGA +
Preference number: 4 (lower is better)
Translates to: GHARALWASGILGPCFHFPPAMW*AAVPKR
Trigger: TCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGG...AAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp CATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGCCACCAGCAATGTGGTaGGCAGCAGTTCCCAAACGA +
Preference number: 4 (lower is better)
Translates to: HARALWASGILGPCFHFRPPAMW*AAVPKR
Trigger: TCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGG...CCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp CATTTTAGGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCATACTGTCTGATAGCTaGGGCGCTTGTGCCCATACA +
Preference number: 4 (lower is better)
Translates to: HFRGMAQAHYNRSGKEPAILSDS*GACAHT
Trigger: TGTATGGGCACAAGCGCCTCAGCTATCAGACAGTAT...GGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCCTAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR TCA 90 bp GGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTCCCAAACGAAGAGGATaGGACCAAACACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GHARALWASGILGPCFHFPKRRG*DQTPGS
Trigger: GCTACCTGGTGTTTGGTCTCATCCTCTTCGTTTGGG...AAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp AGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGTGTGGACCCAAACGAAGAGGATaGGACCAAACACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SLCLLSGRHRRGSRLQCGPKRRG*DQTPGS
Trigger: GCTACCTGGTGTTTGGTCTCATCCTCTTCGTTTGGG...TCCACACTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp AACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGAGTCATTCACCAGATCTaGCTGGTCAGATACGTTGTA +
Preference number: 4 (lower is better)
Translates to: NLGKKQQTYLAQGPGIRGVIHQI*LVRYVV
Trigger: TACAACGTATCTGACCAGGCAGATCTGGTGAATGAC...TCCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR TCA 90 bp GCCCACCAGCAATGTGGTGGGCAGCAGTTCCCAAACGAAGAGGATGAGACCAAAATACTGTCTGATAGCTaGGGCGCTTGTGCCCATACA +
Preference number: 4 (lower is better)
Translates to: AHQQCGGQQFPNEEDETKILSDS*GACAHT
Trigger: TGTATGGGCACAAGCGCCTCAGCTATCAGACAGTAT...TTTGGTCTCATCCTCTTCGTTTGGGAACTGCTGCCCACCACATTGCTGGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000238128.2
CDS-3UTR TCA 90 bp ATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGGCAAAAACCTGCCCATTaGGGATTCGACTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: MPGHCGHLVSWGLVSILGQKPAH*GFDWCS
Trigger: TGAGCACCAGTCGAATCCTCAATGGGCAGGTTTTTG...CCCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp CACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCGTCATTCACCAGATCTaGCTGGTCAGATACGTTGTA +
Preference number: 4 (lower is better)
Translates to: HKLTTIGAARSRPEERSSVIHQI*LVRYVV
Trigger: TACAACGTATCTGACCAGGCAGATCTGGTGAATGAC...GCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp TGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCGTCATTCACCAGATCTaGCTGGTCAGATACGTTGTA +
Preference number: 4 (lower is better)
Translates to: WHKLTTIGAARSRPEERSVIHQI*LVRYVV
Trigger: TACAACGTATCTGACCAGGCAGATCTGGTGAATGAC...GCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR GCA 90 bp GGGCACAGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGGTCATTCACCAGATCTaGCTGGTCAGATACGTTGTA +
Preference number: 4 (lower is better)
Translates to: GHSLCLLSGRHRRGSRLQVIHQI*LVRYVV
Trigger: TACAACGTATCTGACCAGGCAGATCTGGTGAATGAC...CTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCTGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS-3UTR CCA 90 bp AGCCTCTGTTTATTGAGTGGTAGGCACAGGAGAGGTAGCCGGCTCCAGTGTGGAAGAAGGAGAAAAGTGTaGTACGCAAGGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SLCLLSGRHRRGSRLQCGRRRKV*YARLPR
Trigger: TCTGGGCAGCCTTGCGTACCACACTTTTCTCCTTCT...TCCACACTGGAGCCGGCTACCTCTCCTGTGCCTACCACTCAATAAACAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS-3UTR GCA 90 bp CAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTGTCATTCACCAGATCTaGCTGGTCAGATACGTTGTA +
Preference number: 4 (lower is better)
Translates to: QVMPGHCGHLVSWGLVSIVIHQI*LVRYVV
Trigger: TACAACGTATCTGACCAGGCAGATCTGGTGAATGAC...AATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099774.10
ENSMUST00000099776.6
ENSMUST00000099782.10
ENSMUST00000166115.9
ENSMUST00000237934.2
ENSMUST00000238183.2
CDS CCA 90 bp GCCCTCCTACTCCCACCACACCGGTTCCCGTGGTTACACCTATCCTaGCAGCAGAGGCCCCTGGAGCCCCACGGCTCGCCTTCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: ALLLPPHRFPWLHLS*QQRPLEPHGSPSWA
Trigger: CGCCCAGGAAGGCGAGCCGTGGGGCTCCAGGGGCCTCTGCTGCCAGGATAGGTGTAACCACGGGAACCGGTGTGGTGGGAGTAGGAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099782.10
ENSMUST00000235881.2
CDS-3UTR CAA 90 bp CTGTGGGGGCCGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGG +
Preference number: 5 (lower is better)
Translates to: LWGPVYPEEAHQQCGGQQGRRFA*ALNTTW
Trigger: CCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCC...CTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCGGCCCCCACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000238128.2
CDS CCA 90 bp GGCTGTGCCTGGCGCTGGCGAGACAGCAAAGCCTCGGCTCATCTCTaGCCGACGCTTCGCCTTGGCCTTGAACACCACCTGGGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: GCAWRWRDSKASAHL*PTLRLGLEHHLGAE
Trigger: CTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTTGCTGTCTCGCCAGCGCCAGGCACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235518.2
CDS GCA 90 bp GGCAGTGTAGGCAGCGGTCAGCCCCAGGGTCACTGTAGGCGGCAGTaGAGGTACCAGCCCAGCTGCAGGCACCAGACCAGACAGGTTACT +
Preference number: 5 (lower is better)
Translates to: GSVGSGQPQGHCRRQ*RYQPSCRHQTRQVT
Trigger: AGTAACCTGTCTGGTCTGGTGCCTGCAGCTGGGCTGGTACCTGCACTGCCGCCTACAGTGACCCTGGGGCTGACCGCTGCCTACACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS GCA 90 bp GGCCCGGCTGGCATAGAGAAGGACCATGGCACCCCCTATAGCAGCTaGCTGACACACGCTGGTCCCAAGCCTCGGCTCATCTCTGGCCGA +
Preference number: 5 (lower is better)
Translates to: GPAGIEKDHGTPYSS*LTHAGPKPRLISGR
Trigger: TCGGCCAGAGATGAGCCGAGGCTTGGGACCAGCGTGTGTCAGGCAGCTGCTATAGGGGGTGCCATGGTCCTTCTCTATGCCAGCCGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099774.10
CDS GCA 90 bp AGAGTCGCTCACCAGGACACGTACCAGCAGAAGGACCCAGGGCTGTaGCTGGCGCTGGCGAGACAGCAAAGCCTCGGCTCATCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: RVAHQDTYQQKDPGL*LALARQQSLGSSLA
Trigger: GGCCAGAGATGAGCCGAGGCTTTGCTGTCTCGCCAGCGCCAGGCACAGCCCTGGGTCCTTCTGCTGGTACGTGTCCTGGTGAGCGACTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS-3UTR CAA 90 bp GGACATGCTGGTGCTCTCACTCCGGCTATGCTCCCAGGAGCAGCCCTCATCCTCGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGG +
Preference number: 5 (lower is better)
Translates to: GHAGALTPAMLPGAALILGRRFA*ALNTTW
Trigger: CCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCC...GAGGATGAGGGCTGCTCCTGGGAGCATAGCCGGAGTGAGAGCACCAGCATGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
CDS CCA 90 bp GGCTGTGCCTGGCGCTGGCGAGACAGCAAAGCCTCGGCTCATCTCTaGCCGACGCTTCGCCTTGGCCTTGAACACCACCTGCACAAAGTA +
Preference number: 5 (lower is better)
Translates to: GCAWRWRDSKASAHL*PTLRLGLEHHLHKV
Trigger: TACTTTGTGCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTTGCTGTCTCGCCAGCGCCAGGCACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235237.2
CDS-3UTR CAA 90 bp GCAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGC +
Preference number: 5 (lower is better)
Translates to: AGHARALWASGILGPCFHGRRFA*ALNTTC
Trigger: GCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCC...ATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000025909.11
ENSMUST00000166115.9
ENSMUST00000237934.2
CDS-3UTR CAA 90 bp AACCTGGGCAAGAAGCAGCAGACGTACTTGGCACAGGGGCCAGGGATCAGGGGACGCTTCGCCTTGGCCTaGAACACCACCTGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: NLGKKQQTYLAQGPGIRGRFALA*NTTWEQ
Trigger: CTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCG...TCCCCTGATCCCTGGCCCCTGTGCCAAGTACGTCTGCTGCTTCTTGCCCAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000099774.10
ENSMUST00000099782.10
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000238183.2
CDS-3UTR CAA 90 bp CACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGG +
Preference number: 5 (lower is better)
Translates to: HKLTTIGAARSRPEERSSGRRFA*ALNTTW
Trigger: CCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCC...GCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099774.10
ENSMUST00000099782.10
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000238183.2
CDS-3UTR CAA 90 bp GCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGG +
Preference number: 5 (lower is better)
Translates to: AQAHYNRSGKEPARGEKQGRRFA*ALNTTW
Trigger: CCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCC...CTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000099774.10
ENSMUST00000099782.10
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000238183.2
CDS-3UTR CAA 90 bp GCAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGG +
Preference number: 5 (lower is better)
Translates to: AGHARALWASGILGPCFHGRRFA*ALNTTW
Trigger: CCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCC...ATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099774.10
ENSMUST00000099782.10
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000238183.2
CDS-3UTR CAA 90 bp GGCTCCGAGGGGCCAAGGCCAGAGCTGCCAGGTTGTAACAGGCCCGGCTGGCATTTTGGACCATTGAGATaGCCCTCCTACTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: GSEGPRPELPGCNRPGWHFGPLR*PSYSHH
Trigger: GTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAA...ATGCCAGCCGGGCCTGTTACAACCTGGCAGCTCTGGCCTTGGCCCCTCGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000235881.2
ENSMUST00000238128.2
CDS TCA 90 bp GTCCCAAGCCTCGGCTCATCTCTGGCCGACGCTTCGCCTTGGCCTTaGACACCACCTGGGAGCAGAGATACCCCATCACTCCTTTGGACC +
Preference number: 5 (lower is better)
Translates to: VPSLGSSLADASPWP*TPPGSRDTPSLLWT
Trigger: GGTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099774.10
ENSMUST00000235881.2
ENSMUST00000238128.2
CDS-3UTR CAA 90 bp CAGGTCATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGC +
Preference number: 5 (lower is better)
Translates to: QVMPGHCGHLVSWGLVSIGRRFA*ALNTTC
Trigger: GCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCC...AATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000025909.11
ENSMUST00000166115.9
ENSMUST00000237934.2
CDS-3UTR CAA 90 bp GTGGCCAGCCCGGTCAAAGAAGTAGGATCGGGAGCCAAAAACCTGCCCATTGAGGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGC +
Preference number: 5 (lower is better)
Translates to: VASPVKEVGSGAKNLPIEGRRFA*ALNTTC
Trigger: GCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCC...CTCAATGGGCAGGTTTTTGGCTCCCGATCCTACTTCTTTGACCGGGCTGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000235237.2
CDS-3UTR CAA 90 bp CATTTTAGGGGGATGGCACAAGCTCACTACAATAGGAGCGGCAAGGAGCCGGCCGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGC +
Preference number: 5 (lower is better)
Translates to: HFRGMAQAHYNRSGKEPAGRRFA*ALNTTC
Trigger: GCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCC...GGCCGGCTCCTTGCCGCTCCTATTGTAGTGAGCTTGTGCCATCCCCCTAAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000025909.11
ENSMUST00000166115.9
ENSMUST00000237934.2
CDS TCA 90 bp CAGCAAAGCCTCGGCTCATCTCTGGCCGACGCTTCGCCTTGGCCTTaGACACCACCTGGGAGCAGAGATACCCCATCACTCCTTTGGACC +
Preference number: 5 (lower is better)
Translates to: QQSLGSSLADASPWP*TPPGSRDTPSLLWT
Trigger: GGTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235518.2
CDS-3UTR CAA 90 bp TGTGGGGGCCGGTGTACCCGGAAGAAGCCCACCAGCAATGTGGTGGGCAGCAGTTTTGGACCATTGAGATaGCCCTCCTACTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: CGGRCTRKKPTSNVVGSSFGPLR*PSYSHH
Trigger: GTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAA...ACTGCTGCCCACCACATTGCTGGTGGGCTTCTTCCGGGTACACCGGCCCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000238128.2
CDS TCA 90 bp AACACCACCTGGGAGCAGAGATACCCCATCACTCCTTTGGACCATTaGGATTGCCCTCCTACTCCCACCACACCGGTTCCCGTGGTTACC +
Preference number: 5 (lower is better)
Translates to: NTTWEQRYPITPLDH*DCPPTPTTPVPVVT
Trigger: GGTAACCACGGGAACCGGTGTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000238128.2
ENSMUST00000238183.2
CDS-3UTR CAA 90 bp AGCCTTTGTTCCCTAGGTCATTCACCAGATCTGCCTGGTCAGATACGTTGTACCGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGG +
Preference number: 5 (lower is better)
Translates to: SLCSLGHSPDLPGQIRCTGRRFA*ALNTTW
Trigger: CCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCC...GGTACAACGTATCTGACCAGGCAGATCTGGTGAATGACCTAGGGAACAAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235881.2
ENSMUST00000238128.2
CDS-3UTR CAA 90 bp CTCACTACAATAGGAGCGGCAAGGAGCCGGCCAGAGGAGAGAAGCAGCCACAGTTTTGGACCATTGAGATaGCCCTCCTACTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: LTTIGAARSRPEERSSHSFGPLR*PSYSHH
Trigger: GTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAA...ACTGTGGCTGCTTCTCTCCTCTGGCCGGCTCCTTGCCGCTCCTATTGTAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000099782.10
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000238183.2
CDS TCA 90 bp AACACCACCTGGGAGCAGAGATACCCCATCACTCCTTTGGACCATTaGGATTGCCCTCCTACTCCCACCACACCGGTTCCCGTGGTTACA +
Preference number: 5 (lower is better)
Translates to: NTTWEQRYPITPLDH*DCPPTPTTPVPVVT
Trigger: TGTAACCACGGGAACCGGTGTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099782.10
ENSMUST00000235881.2
CDS-3UTR CAA 90 bp CATGCCAGGGCACTGTGGGCATCTGGTATCCTGGGGCCTTGTTTCCATTTTAGGTTTGGACCATTGAGATaGCCCTCCTACTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: HARALWASGILGPCFHFRFGPLR*PSYSHH
Trigger: GTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAA...CCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCCTGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000099782.10
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000238183.2
CDS-3UTR CAA 90 bp TCGGGAGCCAAAAACCTGCCCATTGAGGATTCGACTGGTGCTCAGATCCTGTGGTTTGGACCATTGAGATaGCCCTCCTACTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: SGAKNLPIEDSTGAQILWFGPLR*PSYSHH
Trigger: GTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAA...CCACAGGATCTGAGCACCAGTCGAATCCTCAATGGGCAGGTTTTTGGCTCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000235518.2
ENSMUST00000235881.2
CDS GCA 72 bp GGCAGCGGTCAGCCCCAGGGTCACTGTAGGCGGCAGTaGAGGTACCAGCCCAGCTGCAGGCACCAGACCAGA +
Preference number: 6 (lower is better)
Translates to: GSGQPQGHCRRQ*RYQPSCRHQTR
Trigger: TCTGGTCTGGTGCCTGCAGCTGGGCTGGTACCTGCACTGCCGCCTACAGTGACCCTGGGGCTGACCGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000237934.2
CDS CCA 72 bp CTCCCACCACACCGGTTCCCGTGGTTACACCTATCCTaGCAGCAGAGGCCCCTGGAGCCCCACGGCTCGCCT +
Preference number: 6 (lower is better)
Translates to: LPPHRFPWLHLS*QQRPLEPHGSP
Trigger: AGGCGAGCCGTGGGGCTCCAGGGGCCTCTGCTGCCAGGATAGGTGTAACCACGGGAACCGGTGTGGTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099782.10
ENSMUST00000235881.2
CDS CCA 72 bp GGCAGTGCAAGGCCTCCACGATCGGGAAGAAGGAGCTaGTCTTCCCATCCCGGTCACTCGGTCCAGGGGGAG +
Preference number: 6 (lower is better)
Translates to: GSARPPRSGRRS*SSHPGHSVQGE
Trigger: CTCCCCCTGGACCGAGTGACCGGGATGGGAAGACCAGCTCCTTCTTCCCGATCGTGGAGGCCTTGCACTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000099782.10
ENSMUST00000235881.2
ENSMUST00000236348.2
CDS CCA 72 bp CCTGACACACGCTGGTCCCAAGCCTCGGCTCATCTCTaGCCGACGCTTCGCCTTGGCCTTGAACACCACCTG +
Preference number: 6 (lower is better)
Translates to: PDTRWSQASAHL*PTLRLGLEHHL
Trigger: CAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTGGGACCAGCGTGTGTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099774.10
ENSMUST00000235881.2
ENSMUST00000238128.2
CDS CCA 72 bp TGGCGCTGGCGAGACAGCAAAGCCTCGGCTCATCTCTaGCCGACGCTTCGCCTTGGCCTTGAACACCACCTG +
Preference number: 6 (lower is better)
Translates to: WRWRDSKASAHL*PTLRLGLEHHL
Trigger: CAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTTGCTGTCTCGCCAGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS CCA 72 bp AGGACACGTACCAGCAGAAGGACCCAGGGCTGTGCCTaGCGCTGGCGAGACAGCAAAGCCTCGGCTCATCTC +
Preference number: 6 (lower is better)
Translates to: RTRTSRRTQGCA*RWRDSKASAHL
Trigger: GAGATGAGCCGAGGCTTTGCTGTCTCGCCAGCGCCAGGCACAGCCCTGGGTCCTTCTGCTGGTACGTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000235237.2
ENSMUST00000235518.2
CDS CAA 72 bp CCCAAGCCTCGGCTCATCTCTGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGGGAGCAGAGATACCCC +
Preference number: 6 (lower is better)
Translates to: PKPRLISGRRFA*ALNTTWEQRYP
Trigger: GGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099774.10
ENSMUST00000235881.2
ENSMUST00000238128.2
CDS CAA 90 bp CACGCTGGTCCCAAGCCTCGGCTCATCTCTGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGGGAGCAGAGATACCCCATCACTCCT +
Preference number: 6 (lower is better)
Translates to: HAGPKPRLISGRRFA*ALNTTWEQRYPITP
Trigger: AGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTGGGACCAGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099774.10
ENSMUST00000235881.2
ENSMUST00000238128.2
CDS CCA 72 bp GAGATTGCCCTCCTACTCCCACCACACCGGTTCCCGTaGTTACACCTATCCTGGCAGCAGAGGCCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: EIALLLPPHRFP*LHLSWQQRPLE
Trigger: CTCCAGGGGCCTCTGCTGCCAGGATAGGTGTAACCACGGGAACCGGTGTGGTGGGAGTAGGAGGGCAATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099782.10
ENSMUST00000235881.2
CDS CAA 72 bp GCAAAGCCTCGGCTCATCTCTGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGGGAGCAGAGATACCCC +
Preference number: 6 (lower is better)
Translates to: AKPRLISGRRFA*ALNTTWEQRYP
Trigger: GGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235518.2
CDS CAA 90 bp GGTCCCAAGCCTCGGCTCATCTCTGGCCGACGCTTCGCCTTGGCCTaGAACACCACCTGGGAGCAGAGATACCCCATCACTCCTTTGGAC +
Preference number: 6 (lower is better)
Translates to: GPKPRLISGRRFALA*NTTWEQRYPITPLD
Trigger: GTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099774.10
ENSMUST00000235881.2
ENSMUST00000238128.2
CDS CAA 90 bp GGCGAGACAGCAAAGCCTCGGCTCATCTCTGGCCGACGCTTCGCCTaGGCCTTGAACACCACCTGGGAGCAGAGATACCCCATCACTCCT +
Preference number: 6 (lower is better)
Translates to: GETAKPRLISGRRFA*ALNTTWEQRYPITP
Trigger: AGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTTGCTGTCTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235518.2
CDS GCA 72 bp GGCATAGAGAAGGACCATGGCACCCCCTATAGCAGCTaGCTGACACACGCTGGTCCCAAGCCTCGGCTCATC +
Preference number: 6 (lower is better)
Translates to: GIEKDHGTPYSS*LTHAGPKPRLI
Trigger: GATGAGCCGAGGCTTGGGACCAGCGTGTGTCAGGCAGCTGCTATAGGGGGTGCCATGGTCCTTCTCTATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099774.10
CDS CAA 90 bp ACAGCAAAGCCTCGGCTCATCTCTGGCCGACGCTTCGCCTTGGCCTaGAACACCACCTGGGAGCAGAGATACCCCATCACTCCTTTGGAC +
Preference number: 6 (lower is better)
Translates to: TAKPRLISGRRFALA*NTTWEQRYPITPLD
Trigger: GTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTTCAAGGCCAAGGCGAAGCGTCGGCCAGAGATGAGCCGAGGCTTTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235518.2
CDS CAA 90 bp CACCTGGGAGCAGAGATACCCCATCACTCCTTTGGACCATTGAGATaGCCCTCCTACTCCCACCACACCGGTTCCCGTGGTTACCTGCAC +
Preference number: 6 (lower is better)
Translates to: HLGAEIPHHSFGPLR*PSYSHHTGSRGYLH
Trigger: GTGCAGGTAACCACGGGAACCGGTGTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000235518.2
ENSMUST00000238128.2
ENSMUST00000238183.2
CDS GCA 72 bp GGCATAGAGAAGGACCATGGCACCCCCTATAGCAGCTaGCTGACACACGCTGGTCCCCTGCACAAAGTAGAG +
Preference number: 6 (lower is better)
Translates to: GIEKDHGTPYSS*LTHAGPLHKVE
Trigger: CTCTACTTTGTGCAGGGGACCAGCGTGTGTCAGGCAGCTGCTATAGGGGGTGCCATGGTCCTTCTCTATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099776.6
CDS CAA 90 bp GAACACCACCTGGGAGCAGAGATACCCCATCACTCCTTTGGACCATaGAGATTGCCCTCCTACTCCCACCACACCGGTTCCCGTGGTTAC +
Preference number: 6 (lower is better)
Translates to: EHHLGAEIPHHSFGP*RLPSYSHHTGSRGY
Trigger: GTAACCACGGGAACCGGTGTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAGGTGGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099782.10
ENSMUST00000235518.2
ENSMUST00000235881.2
ENSMUST00000238128.2
ENSMUST00000238183.2
CDS CAA 90 bp CACCTGGGAGCAGAGATACCCCATCACTCCTTTGGACCATTGAGATaGCCCTCCTACTCCCACCACACCGGTTCCCGTGGTTACACCTAT +
Preference number: 6 (lower is better)
Translates to: HLGAEIPHHSFGPLR*PSYSHHTGSRGYTY
Trigger: ATAGGTGTAACCACGGGAACCGGTGTGGTGGGAGTAGGAGGGCAATCTCAATGGTCCAAAGGAGTGATGGGGTATCTCTGCTCCCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099782.10
ENSMUST00000235881.2
CDS GCA 72 bp TCGGAAGTAGAAGGAGAAAAGTGTGGTACGCAAGGCTaGCCAGAGCAGACAGAGCGCCAGGAATACTGTCTG +
Preference number: 6 (lower is better)
Translates to: SEVEGEKCGTQG*PEQTERQEYCL
Trigger: CAGACAGTATTCCTGGCGCTCTGTCTGCTCTGGGCAGCCTTGCGTACCACACTTTTCTCCTTCTACTTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238128.2
CDS CCA 72 bp AATAGAGAAGCCAAAAAGGCAAGGGCCCCAGGCGGTTaGCCCTGGGAGTATCTCGGAAGTAGAAGGAGAAAA +
Preference number: 6 (lower is better)
Translates to: NREAKKARAPGG*PWEYLGSRRRK
Trigger: TTTTCTCCTTCTACTTCCGAGATACTCCCAGGGCCAACCGCCTGGGGCCCTTGCCTTTTTGGCTTCTCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000025909.11
ENSMUST00000099776.6
ENSMUST00000166115.9
ENSMUST00000235237.2
ENSMUST00000235518.2
ENSMUST00000237934.2
ENSMUST00000238128.2