Pregenerated sensors for GPR135 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043398Ensembl transcript IDs: ENSMUST00000050649.6
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCACACCAATCTGCGTAATGACGTTTCTGCTCTGCCTAAGTTTCTaGTCTGAGCACCCGAAGCAGGTCAGCCATGCAGGCTCTAGAATC | + |
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Preference number: 1 (lower is better) Translates to: STPICVMTFLLCLSF*SEHPKQVSHAGSRI Trigger: GATTCTAGAGCCTGCATGGCTGACCTGCTTCGGGTGCTCAGAGCAGAAACTTAGGCAGAGCAGAAACGTCATTACGCAGATTGGTGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR GCA 90 bp | AAATTCCGGGAGAGCACACCAATCTGCGTAATGACGTTTCTGCTCTaGCTAAGTTTCTGCTCTGAGCACCCGAAGCAGGTCAGCCATGCA | + |
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Preference number: 1 (lower is better) Translates to: KFRESTPICVMTFLL*LSFCSEHPKQVSHA Trigger: TGCATGGCTGACCTGCTTCGGGTGCTCAGAGCAGAAACTTAGGCAGAGCAGAAACGTCATTACGCAGATTGGTGTGCTCTCCCGGAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR-3UTR GCA 90 bp | AGGCAGGGCAACAAGTCCCAAGGGACGTTCAGTGTGAGACATTTCACACACACAATGACGTTTCTGCTCTaGCTAAGTTTCTGCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RQGNKSQGTFSVRHFTHTMTFLL*LSFCSE Trigger: CTCAGAGCAGAAACTTAGGCAGAGCAGAAACGTCAT...TGTGTGTGTGAAATGTCTCACACTGAACGTCCCTTGGGACTTGTTGCCCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGGGCAACAAGTCCCAAGGGACGTTCAGTGTGAGACATTTCACACACACACATTTCACATTCCCTTaGCCGCATTTGAAGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: RQGNKSQGTFSVRHFTHTHFTFP*PHLKKG Trigger: CCCTTTCTTCAAATGCGGCCAAGGGAATGTGAAATG...TGTGTGTGTGAAATGTCTCACACTGAACGTCCCTTGGGACTTGTTGCCCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR-3UTR TCA 90 bp | CATACAAGCTATCAAACAGGAACAGTTTCTAGGAAGGACACAGCTGTGATTTTCGCAGGCTCTAGAATCTaGAGGTCTGCTGAATTCTGG | + |
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Preference number: 2 (lower is better) Translates to: HTSYQTGTVSRKDTAVIFAGSRI*RSAEFW Trigger: CCAGAATTCAGCAGACCTTCAGATTCTAGAGCCTGC...GAAAATCACAGCTGTGTCCTTCCTAGAAACTGTTCCTGTTTGATAGCTTGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR-3UTR TCA 90 bp | GTTCAGTGTGAGACATTTCACACACACAGAGCTCTAGATTGTGCTTCTGAGTTAGGAAGGACACAGCTGTaGTTTTCCAAGACAGATAAT | + |
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Preference number: 2 (lower is better) Translates to: VQCETFHTHRALDCASELGRTQL*FSKTDN Trigger: ATTATCTGTCTTGGAAAATCACAGCTGTGTCCTTCC...TAACTCAGAAGCACAATCTAGAGCTCTGTGTGTGTGAAATGTCTCACACTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR-3UTR TCA 90 bp | ACGTTCTATGGCTATTCCAAGAACGTGGTCATACTTTTCAAACTACTTTTAGAATCTGCTGAATTCTGGTaGAAGTACAGGGGCCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: TFYGYSKNVVILFKLLLESAEFW*KYRGLQ Trigger: TTGAAGGCCCCTGTACTTTCACCAGAATTCAGCAGA...TTCTAAAAGTAGTTTGAAAAGTATGACCACGTTCTTGGAATAGCCATAGAACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR-3UTR CCA 90 bp | CATACAAGCTATCAAACAGGAACAGTTTCTAGGAAGGACACAGCTGTGATTTTCGTTCTCTTTGCCCTTTaGACCGCTGAATTATATCTA | + |
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Preference number: 2 (lower is better) Translates to: HTSYQTGTVSRKDTAVIFVLFAL*TAELYL Trigger: TAGATATAATTCAGCGGTCCAAAGGGCAAAGAGAAC...GAAAATCACAGCTGTGTCCTTCCTAGAAACTGTTCCTGTTTGATAGCTTGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR-3UTR TCA 90 bp | ACGTTCTATGGCTATTCCAAGAACGTGGTCATACTTTTCAAACTACTTTTAGAATCCCTTGGCCGCATTTaGAGAAAGGGAATGTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: TFYGYSKNVVILFKLLLESLGRI*RKGMFF Trigger: AAAGAACATTCCCTTTCTTCAAATGCGGCCAAGGGA...TTCTAAAAGTAGTTTGAAAAGTATGACCACGTTCTTGGAATAGCCATAGAACGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR-3UTR TCA 90 bp | ACGTTCTATGGCTATTCCAAGAACGTGGTCATACTTTTCAAACTACTTTTAGAAAATCTGAAGGTCTGCTaGATTCTGGTGAAAGTACAG | + |
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Preference number: 2 (lower is better) Translates to: TFYGYSKNVVILFKLLLENLKVC*ILVKVQ Trigger: CTGTACTTTCACCAGAATTCAGCAGACCTTCAGATT...TTCTAAAAGTAGTTTGAAAAGTATGACCACGTTCTTGGAATAGCCATAGAACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR-3UTR CCA 90 bp | ACGTTCTATGGCTATTCCAAGAACGTGGTCATACTTTTCAAACTACTTTTAGAAATTAATGAAAACATTTaGAGTGGCACCCATACAAGC | + |
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Preference number: 2 (lower is better) Translates to: TFYGYSKNVVILFKLLLEINENI*SGTHTS Trigger: GCTTGTATGGGTGCCACTCCAAATGTTTTCATTAAT...TTCTAAAAGTAGTTTGAAAAGTATGACCACGTTCTTGGAATAGCCATAGAACGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR GCA 72 bp | ATCTGCGTAATGACGTTTCTGCTCTGCCTAAGTTTCTaGTCTGAGCACCCGAAGCAGGTCAGCCATGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: ICVMTFLLCLSF*SEHPKQVSHAG Trigger: GCCTGCATGGCTGACCTGCTTCGGGTGCTCAGAGCAGAAACTTAGGCAGAGCAGAAACGTCATTACGCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR GCA 72 bp | GAGAGCACACCAATCTGCGTAATGACGTTTCTGCTCTaGCTAAGTTTCTGCTCTGAGCACCCGAAGCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: ESTPICVMTFLL*LSFCSEHPKQV Trigger: GACCTGCTTCGGGTGCTCAGAGCAGAAACTTAGGCAGAGCAGAAACGTCATTACGCAGATTGGTGTGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR-3UTR CAA 90 bp | AGGCAGGGCAACAAGTCCCAAGGGACGTTCAGTGTGAGACATTTCACACACACAGGTATCTCTCCAACCTaGTGCCAATGGACTTTTATC | + |
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Preference number: 3 (lower is better) Translates to: RQGNKSQGTFSVRHFTHTGISPT*CQWTFI Trigger: GATAAAAGTCCATTGGCACAAGGTTGGAGAGATACC...TGTGTGTGTGAAATGTCTCACACTGAACGTCCCTTGGGACTTGTTGCCCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR-3UTR CAA 90 bp | AGGCAGGGCAACAAGTCCCAAGGGACGTTCAGTGTGAGACATTTCACACACACAATATTTTCAGTTGGCTaGAGGTATCTCTCCAACCTT | + |
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Preference number: 3 (lower is better) Translates to: RQGNKSQGTFSVRHFTHTIFSVG*RYLSNL Trigger: AAGGTTGGAGAGATACCTCAAGCCAACTGAAAATAT...TGTGTGTGTGAAATGTCTCACACTGAACGTCCCTTGGGACTTGTTGCCCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR GCA 72 bp | AATCTTGCACAAAAATTCCGGGAGAGCACACCAATCTaGGTAATGACGTTTCTGCTCTGCCTAAGTTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: NLAQKFRESTPI*VMTFLLCLSFC Trigger: GCAGAAACTTAGGCAGAGCAGAAACGTCATTACGCAGATTGGTGTGCTCTCCCGGAATTTTTGTGCAAGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR-3UTR CAA 90 bp | GTTCAGTGTGAGACATTTCACACACACAGAGCTCTAGATTGTGCTTCTGAGTTATTCCCTTGGCCGCATTaGAAGAAAGGGAATGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: VQCETFHTHRALDCASELFPWPH*KKGNVL Trigger: AAGAACATTCCCTTTCTTCAAATGCGGCCAAGGGAA...TAACTCAGAAGCACAATCTAGAGCTCTGTGTGTGTGAAATGTCTCACACTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR GCA 72 bp | TGGCTAGTTCACATAGTGAAATCTTCACATAACAGATaGAGTTTCATACTTTTTAAAGTGCGTGTTCAGCTA | + |
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Preference number: 3 (lower is better) Translates to: WLVHIVKSSHNR*SFILFKVRVQL Trigger: TAGCTGAACACGCACTTTAAAAAGTATGAAACTGCATCTGTTATGTGAAGATTTCACTATGTGAACTAGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| 3UTR CCA 72 bp | CTGTTTAAACAACTACAGTATGTTCTCTTTGCCCTTTaGACCGCTGAATTATATCTAGTAATAAAAGACCTT | + |
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Preference number: 3 (lower is better) Translates to: LFKQLQYVLFAL*TAELYLVIKDL Trigger: AAGGTCTTTTATTACTAGATATAATTCAGCGGTCCAAAGGGCAAAGAGAACATACTGTAGTTGTTTAAACAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR CCA 90 bp | AGGCAGGGCAACAAGTCCCAAGGGACGTTCAGTGTGAGACATTTCACACACACAACAGCGCGGCTGCAGTaGCCGTGGAAGCCGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: RQGNKSQGTFSVRHFTHTTARLQ*PWKPPL Trigger: GAGGGGCGGCTTCCACGGCCACTGCAGCCGCGCTGT...TGTGTGTGTGAAATGTCTCACACTGAACGTCCCTTGGGACTTGTTGCCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR TCA 90 bp | AGGCAGGGCAACAAGTCCCAAGGGACGTTCAGTGTGAGACATTTCACACACACACTGTGCGCACCTCGCTaGAGAAGCGCAGCACGCGCG | + |
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Preference number: 4 (lower is better) Translates to: RQGNKSQGTFSVRHFTHTLCAPR*RSAARA Trigger: CGCGCGTGCTGCGCTTCTTCAGCGAGGTGCGCACAG...TGTGTGTGTGAAATGTCTCACACTGAACGTCCCTTGGGACTTGTTGCCCTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR TCA 90 bp | AGGCAGGGCAACAAGTCCCAAGGGACGTTCAGTGTGAGACATTTCACACACACAGACCACTTCCCCTCCTaGCCCACTAGCTGGGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQGNKSQGTFSVRHFTHTDHFPS*PTSWVG Trigger: TCCAACCCAGCTAGTGGGTCAGGAGGGGAAGTGGTC...TGTGTGTGTGAAATGTCTCACACTGAACGTCCCTTGGGACTTGTTGCCCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR GCA 90 bp | AGGCAGGGCAACAAGTCCCAAGGGACGTTCAGTGTGAGACATTTCACACACACAACAGGCGCACGGTCTTaGAGATGTGGTAGCGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RQGNKSQGTFSVRHFTHTTGARS*RCGSGR Trigger: TCTGCCGCTACCACATCTGCAAGACCGTGCGCCTGT...TGTGTGTGTGAAATGTCTCACACTGAACGTCCCTTGGGACTTGTTGCCCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR GCA 90 bp | AGGCAGGGCAACAAGTCCCAAGGGACGTTCAGTGTGAGACATTTCACACACACAAAGAAGGCATCCTGCTaGAAGCCCCAAGCCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: RQGNKSQGTFSVRHFTHTKKASC*KPQACW Trigger: CCAACAGGCTTGGGGCTTGCAGCAGGATGCCTTCTT...TGTGTGTGTGAAATGTCTCACACTGAACGTCCCTTGGGACTTGTTGCCCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR CCA 90 bp | GTTCAGTGTGAGACATTTCACACACACAGAGCTCTAGATTGTGCTTCTGAGTTAGCACGCGCGCGTAAGTaGTCATCGGCCGCACGCGCA | + |
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Preference number: 4 (lower is better) Translates to: VQCETFHTHRALDCASELARARK*SSAARA Trigger: TGCGCGTGCGGCCGATGACCACTTACGCGCGCGTGC...TAACTCAGAAGCACAATCTAGAGCTCTGTGTGTGTGAAATGTCTCACACTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR TCA 90 bp | GTTCAGTGTGAGACATTTCACACACACAGAGCTCTAGATTGTGCTTCTGAGTTAGGCAGAGCAGCGCAGTaGGCAGGTCCGACAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: VQCETFHTHRALDCASELGRAAQ*AGPTGT Trigger: TGTCCCTGTCGGACCTGCTCACTGCGCTGCTCTGCC...TAACTCAGAAGCACAATCTAGAGCTCTGTGTGTGTGAAATGTCTCACACTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR CCA 90 bp | AGGCAGGGCAACAAGTCCCAAGGGACGTTCAGTGTGAGACATTTCACACACACATGCGTCCTAGGAGCATaGAAATGTTGGGGTTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: RQGNKSQGTFSVRHFTHTCVLGA*KCWGCG Trigger: TCCGCAACCCCAACATTTCCATGCTCCTAGGACGCA...TGTGTGTGTGAAATGTCTCACACTGAACGTCCCTTGGGACTTGTTGCCCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR GCA 90 bp | CATACAAGCTATCAAACAGGAACAGTTTCTAGGAAGGACACAGCTGTGATTTTCGAAGAAGCGGCTGGCTaGGCAGAAGCTGCGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HTSYQTGTVSRKDTAVIFEEAAG*AEAAPG Trigger: CCCTGGCGCAGCTTCTGCGCAGCCAGCCGCTTCTTC...GAAAATCACAGCTGTGTCCTTCCTAGAAACTGTTCCTGTTTGATAGCTTGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR CCA 90 bp | ACGTTCTATGGCTATTCCAAGAACGTGGTCATACTTTTCAAACTACTTTTAGAAGCGGCGGCCGCACGATaGCGCAGTAGCGGTCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: TFYGYSKNVVILFKLLLEAAAAR*RSSGPA Trigger: CGCTGGACCGCTACTGCGCCATCGTGCGGCCGCCGC...TTCTAAAAGTAGTTTGAAAAGTATGACCACGTTCTTGGAATAGCCATAGAACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR GCA 90 bp | GTTCAGTGTGAGACATTTCACACACACAGAGCTCTAGATTGTGCTTCTGAGTTAGTGCGCAGCTGCCGATaGTTCACGATCACCCCCATC | + |
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Preference number: 4 (lower is better) Translates to: VQCETFHTHRALDCASELVRSCR*FTITPI Trigger: GATGGGGGTGATCGTGAAGCATCGGCAGCTGCGCAC...TAACTCAGAAGCACAATCTAGAGCTCTGTGTGTGTGAAATGTCTCACACTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR GCA 90 bp | ACGTTCTATGGCTATTCCAAGAACGTGGTCATACTTTTCAAACTACTTTTAGAAAGCCAACCACGCTCCTaGCAGCAGCTGCAGCGCGCG | + |
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Preference number: 4 (lower is better) Translates to: TFYGYSKNVVILFKLLLESQPRS*QQLQRA Trigger: CGCGCGCTGCAGCTGCTGGCAGGAGCGTGGTTGGCT...TTCTAAAAGTAGTTTGAAAAGTATGACCACGTTCTTGGAATAGCCATAGAACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR GCA 90 bp | GTTCAGTGTGAGACATTTCACACACACAGAGCTCTAGATTGTGCTTCTGAGTTATGGAAGAAGGCATCCTaGTGCAAGCCCCAAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: VQCETFHTHRALDCASELWKKAS*CKPQAC Trigger: ACAGGCTTGGGGCTTGCAGCAGGATGCCTTCTTCCA...TAACTCAGAAGCACAATCTAGAGCTCTGTGTGTGTGAAATGTCTCACACTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR GCA 90 bp | GTTCAGTGTGAGACATTTCACACACACAGAGCTCTAGATTGTGCTTCTGAGTTAACCCTTCTTCGCGGTTaGGTCCTAGGAGCATGGAAA | + |
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Preference number: 4 (lower is better) Translates to: VQCETFHTHRALDCASELTLLRG*VLGAWK Trigger: TTTCCATGCTCCTAGGACGCAACCGCGAAGAAGGGT...TAACTCAGAAGCACAATCTAGAGCTCTGTGTGTGTGAAATGTCTCACACTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR CCA 90 bp | AGGCAGGGCAACAAGTCCCAAGGGACGTTCAGTGTGAGACATTTCACACACACAAAATGCTGCTGTCCCTaGTTTCAGAATTATGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: RQGNKSQGTFSVRHFTHTKCCCP*FQNYAV Trigger: AACTGCATAATTCTGAAACCAGGGACAGCAGCATTT...TGTGTGTGTGAAATGTCTCACACTGAACGTCCCTTGGGACTTGTTGCCCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR CCA 90 bp | GTTCAGTGTGAGACATTTCACACACACAGAGCTCTAGATTGTGCTTCTGAGTTAGGCGATTGCGACTTCTaGCTTGAAAACCTAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VQCETFHTHRALDCASELGDCDF*LENLGL Trigger: AAGGCCTAGGTTTTCAAGCCAGAAGTCGCAATCGCC...TAACTCAGAAGCACAATCTAGAGCTCTGTGTGTGTGAAATGTCTCACACTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR TCA 90 bp | ACGTTCTATGGCTATTCCAAGAACGTGGTCATACTTTTCAAACTACTTTTAGAATTCCGAAACACGAACTaGAGAAGCGGCTGGCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: TFYGYSKNVVILFKLLLEFRNTN*RSGWLR Trigger: GCGCAGCCAGCCGCTTCTTCAGTTCGTGTTTCGGAA...TTCTAAAAGTAGTTTGAAAAGTATGACCACGTTCTTGGAATAGCCATAGAACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR TCA 90 bp | ACGTTCTATGGCTATTCCAAGAACGTGGTCATACTTTTCAAACTACTTTTAGAATTTTTCGAGCCCACATaGCCACTTCCCCTCCTGACC | + |
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Preference number: 4 (lower is better) Translates to: TFYGYSKNVVILFKLLLEFFEPT*PLPLLT Trigger: GGTCAGGAGGGGAAGTGGTCATGTGGGCTCGAAAAA...TTCTAAAAGTAGTTTGAAAAGTATGACCACGTTCTTGGAATAGCCATAGAACGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR GCA 90 bp | CATACAAGCTATCAAACAGGAACAGTTTCTAGGAAGGACACAGCTGTGATTTTCCATTTCGAAGGCGATTaGGACTTCTGGCTTGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: HTSYQTGTVSRKDTAVIFHFEGD*DFWLEN Trigger: GTTTTCAAGCCAGAAGTCGCAATCGCCTTCGAAATG...GAAAATCACAGCTGTGTCCTTCCTAGAAACTGTTCCTGTTTGATAGCTTGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR CCA 90 bp | ACGTTCTATGGCTATTCCAAGAACGTGGTCATACTTTTCAAACTACTTTTAGAAGGAGCATGGAAATGTTaGGGTTGCGGATGGCATATA | + |
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Preference number: 4 (lower is better) Translates to: TFYGYSKNVVILFKLLLEGAWKC*GCGWHI Trigger: TATATGCCATCCGCAACCCCAACATTTCCATGCTCC...TTCTAAAAGTAGTTTGAAAAGTATGACCACGTTCTTGGAATAGCCATAGAACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS GCA 90 bp | GCTGCAGTGGCCGTGGAAGCCGCCCCTCCCGGATGCGCGCTACCCTaGAAGGTTGCACTCGCGGCCGGGCGGCCAGGCGGCCGCGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: AAVAVEAAPPGCALP*KVALAAGRPGGRAC Trigger: GCAGGCGCGGCCGCCTGGCCGCCCGGCCGCGAGTGCAACCTTGCAGGGTAGCGCGCATCCGGGAGGGGCGGCTTCCACGGCCACTGCAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS GCA 90 bp | GGCCGTGGAAGCCGCCCCTCCCGGATGCGCGCTACCCTGCAAGGTTaGACTCGCGGCCGGGCGGCCAGGCGGCCGCGCCTGCTCCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: GRGSRPSRMRATLQG*TRGRAARRPRLLLH Trigger: ATGGAGGAGCAGGCGCGGCCGCCTGGCCGCCCGGCCGCGAGTGCAACCTTGCAGGGTAGCGCGCATCCGGGAGGGGCGGCTTCCACGGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS GCA 90 bp | CAGGTCCCAGGGCAGGGAGAAGCCCAGCGCAGCCAACCACGCTCCTaGCAGCAGCTGCAGCGCGCGCCGCCGGCCCAGCTTGTCCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: QVPGQGEAQRSQPRS*QQLQRAPPAQLVPR Trigger: CCGCGGGACAAGCTGGGCCGGCGGCGCGCGCTGCAGCTGCTGGCAGGAGCGTGGTTGGCTGCGCTGGGCTTCTCCCTGCCCTGGGACCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS CCA 90 bp | CACCACCAGTCCCACGCTGTAGGCGACGCCCAGCTGCGCAGGGTCTaGGGAGGTTCTGTAAAGGCAGCGGTGGAAGCTCTGCGGAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: HHQSHAVGDAQLRRV*GGSVKAAVEALRSG Trigger: CCCGCTCCGCAGAGCTTCCACCGCTGCCTTTACAGAACCTCCCCAGACCCTGCGCAGCTGGGCGTCGCCTACAGCGTGGGACTGGTGGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS GCA 90 bp | GACAGGGACAGCGACAGGATGAAGGCGTTTGTGACCGTGCGCAGCTaGCGATGCTTCACGATCACCCCCATCACCGCGCAGTTGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: DRDSDRMKAFVTVRS*RCFTITPITAQLPR Trigger: CCTGGGCAACTGCGCGGTGATGGGGGTGATCGTGAAGCATCGGCAGCTGCGCACGGTCACAAACGCCTTCATCCTGTCGCTGTCCCTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS GCA 90 bp | GAACGTGGATACGATTCCGAAACACGAACTGAAGAAGCGGCTGGCTaGGCAGAAGCTGCGCCAGGGCCCAGAGTCTCCGGGAGGCGCGAA | + |
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Preference number: 5 (lower is better) Translates to: ERGYDSETRTEEAAG*AEAAPGPRVSGRRE Trigger: TTCGCGCCTCCCGGAGACTCTGGGCCCTGGCGCAGCTTCTGCGCAGCCAGCCGCTTCTTCAGTTCGTGTTTCGGAATCGTATCCACGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS GCA 90 bp | AAGTGGTCATCGGCCGCACGCGCACGTCCGACAGGCGCACGGTCTTaGAGATGTGGTAGCGGCAGAAACACATCAGTAGGAAGGGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: KWSSAARARPTGARS*RCGSGRNTSVGRAA Trigger: TGCTGCCCTTCCTACTGATGTGTTTCTGCCGCTACCACATCTGCAAGACCGTGCGCCTGTCGGACGTGCGCGTGCGGCCGATGACCACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR CAA 90 bp | CATACAAGCTATCAAACAGGAACAGTTTCTAGGAAGGACACAGCTGTGATTTTCCCCATCACCGCGCAGTaGCCCAGGCTAGACAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: HTSYQTGTVSRKDTAVIFPITAQ*PRLDSK Trigger: CTTGCTGTCTAGCCTGGGCAACTGCGCGGTGATGGG...GAAAATCACAGCTGTGTCCTTCCTAGAAACTGTTCCTGTTTGATAGCTTGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR CAA 90 bp | GTTCAGTGTGAGACATTTCACACACACAGAGCTCTAGATTGTGCTTCTGAGTTAGACCCACTAGCTGGGTaGGAAGAAGGCATCCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: VQCETFHTHRALDCASELDPLAG*EEGILL Trigger: CAGCAGGATGCCTTCTTCCAACCCAGCTAGTGGGTC...TAACTCAGAAGCACAATCTAGAGCTCTGTGTGTGTGAAATGTCTCACACTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR CAA 90 bp | GTTCAGTGTGAGACATTTCACACACACAGAGCTCTAGATTGTGCTTCTGAGTTAGCATATATGACCGGGTaGATAGCCCCATTGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: VQCETFHTHRALDCASELAYMTG*IAPLAQ Trigger: CTGGGCCAATGGGGCTATCAACCCGGTCATATATGC...TAACTCAGAAGCACAATCTAGAGCTCTGTGTGTGTGAAATGTCTCACACTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR CAA 90 bp | GTTCAGTGTGAGACATTTCACACACACAGAGCTCTAGATTGTGCTTCTGAGTTATACCCTTCTTCGCGGTaGCGTCCTAGGAGCATGGAA | + |
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Preference number: 5 (lower is better) Translates to: VQCETFHTHRALDCASELYPSSR*RPRSME Trigger: TTCCATGCTCCTAGGACGCAACCGCGAAGAAGGGTA...TAACTCAGAAGCACAATCTAGAGCTCTGTGTGTGTGAAATGTCTCACACTGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR CAA 90 bp | GTTCAGTGTGAGACATTTCACACACACAGAGCTCTAGATTGTGCTTCTGAGTTAATGGAAATGTTGGGGTaGCGGATGGCATATATGACC | + |
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Preference number: 5 (lower is better) Translates to: VQCETFHTHRALDCASELMEMLG*RMAYMT Trigger: GGTCATATATGCCATCCGCAACCCCAACATTTCCAT...TAACTCAGAAGCACAATCTAGAGCTCTGTGTGTGTGAAATGTCTCACACTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS-3UTR CAA 90 bp | ACGTTCTATGGCTATTCCAAGAACGTGGTCATACTTTTCAAACTACTTTTAGAAAGGAGCATGGAAATGTaGGGGTTGCGGATGGCATAT | + |
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Preference number: 5 (lower is better) Translates to: TFYGYSKNVVILFKLLLERSMEM*GLRMAY Trigger: ATATGCCATCCGCAACCCCAACATTTCCATGCTCCT...TTCTAAAAGTAGTTTGAAAAGTATGACCACGTTCTTGGAATAGCCATAGAACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS GCA 72 bp | AGCCGCCCCTCCCGGATGCGCGCTACCCTGCAAGGTTaGACTCGCGGCCGGGCGGCCAGGCGGCCGCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SRPSRMRATLQG*TRGRAARRPRL Trigger: CAGGCGCGGCCGCCTGGCCGCCCGGCCGCGAGTGCAACCTTGCAGGGTAGCGCGCATCCGGGAGGGGCGGCT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS CAA 72 bp | AAGCCGCCCCTCCCGGATGCGCGCTACCCTGCAAGGTaGCACTCGCGGCCGGGCGGCCAGGCGGCCGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: KPPLPDARYPAR*HSRPGGQAAAP Trigger: AGGCGCGGCCGCCTGGCCGCCCGGCCGCGAGTGCAACCTTGCAGGGTAGCGCGCATCCGGGAGGGGCGGCTT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS CAA 90 bp | TGGCCGTGGAAGCCGCCCCTCCCGGATGCGCGCTACCCTGCAAGGTaGCACTCGCGGCCGGGCGGCCAGGCGGCCGCGCCTGCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: WPWKPPLPDARYPAR*HSRPGGQAAAPAPP Trigger: TGGAGGAGCAGGCGCGGCCGCCTGGCCGCCCGGCCGCGAGTGCAACCTTGCAGGGTAGCGCGCATCCGGGAGGGGCGGCTTCCACGGCCA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS GCA 72 bp | GGGCAGGGAGAAGCCCAGCGCAGCCAACCACGCTCCTaGCAGCAGCTGCAGCGCGCGCCGCCGGCCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GQGEAQRSQPRS*QQLQRAPPAQL Trigger: AAGCTGGGCCGGCGGCGCGCGCTGCAGCTGCTGGCAGGAGCGTGGTTGGCTGCGCTGGGCTTCTCCCTGCCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS TCA 72 bp | CCCCATTGGCCCAGGTCAGCCAAACAGCCGCCACATTaGGCAGCGAGGGAGCCTGCGTGGCCTGACCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PHWPRSAKQPPH*AAREPAWPDPA Trigger: GGCAGGGTCAGGCCACGCAGGCTCCCTCGCTGCTCAATGTGGCGGCTGTTTGGCTGACCTGGGCCAATGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS CAA 90 bp | GTGCGCAGCTGCCGATGCTTCACGATCACCCCCATCACCGCGCAGTaGCCCAGGCTAGACAGCAAGAAGATGAGCAGGAGCACGAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: VRSCRCFTITPITAQ*PRLDSKKMSRSTSA Trigger: GGCGCTCGTGCTCCTGCTCATCTTCTTGCTGTCTAGCCTGGGCAACTGCGCGGTGATGGGGGTGATCGTGAAGCATCGGCAGCTGCGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS GCA 72 bp | AGCGACAGGATGAAGGCGTTTGTGACCGTGCGCAGCTaGCGATGCTTCACGATCACCCCCATCACCGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: SDRMKAFVTVRS*RCFTITPITAQ Trigger: CTGCGCGGTGATGGGGGTGATCGTGAAGCATCGGCAGCTGCGCACGGTCACAAACGCCTTCATCCTGTCGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS GCA 72 bp | TCGGCCGCACGCGCACGTCCGACAGGCGCACGGTCTTaGAGATGTGGTAGCGGCAGAAACACATCAGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: SAARARPTGARS*RCGSGRNTSVG Trigger: TCCTACTGATGTGTTTCTGCCGCTACCACATCTGCAAGACCGTGCGCCTGTCGGACGTGCGCGTGCGGCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS CAA 90 bp | ATGTTGGGGTTGCGGATGGCATATATGACCGGGTTGATAGCCCCATaGGCCCAGGTCAGCCAAACAGCCGCCACATTGAGCAGCGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: MLGLRMAYMTGLIAP*AQVSQTAATLSSEG Trigger: TCCCTCGCTGCTCAATGTGGCGGCTGTTTGGCTGACCTGGGCCAATGGGGCTATCAACCCGGTCATATATGCCATCCGCAACCCCAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS CAA 72 bp | TTGCGGATGGCATATATGACCGGGTTGATAGCCCCATaGGCCCAGGTCAGCCAAACAGCCGCCACATTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LRMAYMTGLIAP*AQVSQTAATLS Trigger: GCTCAATGTGGCGGCTGTTTGGCTGACCTGGGCCAATGGGGCTATCAACCCGGTCATATATGCCATCCGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS CAA 90 bp | AGGAGCATGGAAATGTTGGGGTTGCGGATGGCATATATGACCGGGTaGATAGCCCCATTGGCCCAGGTCAGCCAAACAGCCGCCACATTG | + |
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Preference number: 6 (lower is better) Translates to: RSMEMLGLRMAYMTG*IAPLAQVSQTAATL Trigger: CAATGTGGCGGCTGTTTGGCTGACCTGGGCCAATGGGGCTATCAACCCGGTCATATATGCCATCCGCAACCCCAACATTTCCATGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS CAA 90 bp | TACCCTTCTTCGCGGTTGCGTCCTAGGAGCATGGAAATGTTGGGGTaGCGGATGGCATATATGACCGGGTTGATAGCCCCATTGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: YPSSRLRPRSMEMLG*RMAYMTGLIAPLAQ Trigger: CTGGGCCAATGGGGCTATCAACCCGGTCATATATGCCATCCGCAACCCCAACATTTCCATGCTCCTAGGACGCAACCGCGAAGAAGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS CAA 72 bp | GAAATGTTGGGGTTGCGGATGGCATATATGACCGGGTaGATAGCCCCATTGGCCCAGGTCAGCCAAACAGCC | + |
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Preference number: 6 (lower is better) Translates to: EMLGLRMAYMTG*IAPLAQVSQTA Trigger: GGCTGTTTGGCTGACCTGGGCCAATGGGGCTATCAACCCGGTCATATATGCCATCCGCAACCCCAACATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS CAA 72 bp | TCGCGGTTGCGTCCTAGGAGCATGGAAATGTTGGGGTaGCGGATGGCATATATGACCGGGTTGATAGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: SRLRPRSMEMLG*RMAYMTGLIAP Trigger: TGGGGCTATCAACCCGGTCATATATGCCATCCGCAACCCCAACATTTCCATGCTCCTAGGACGCAACCGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS CAA 90 bp | GTCCTGTACCCTTCTTCGCGGTTGCGTCCTAGGAGCATGGAAATGTaGGGGTTGCGGATGGCATATATGACCGGGTTGATAGCCCCATTG | + |
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Preference number: 6 (lower is better) Translates to: VLYPSSRLRPRSMEM*GLRMAYMTGLIAPL Trigger: CAATGGGGCTATCAACCCGGTCATATATGCCATCCGCAACCCCAACATTTCCATGCTCCTAGGACGCAACCGCGAAGAAGGGTACAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS CAA 72 bp | CCTTCTTCGCGGTTGCGTCCTAGGAGCATGGAAATGTaGGGGTTGCGGATGGCATATATGACCGGGTTGATA | + |
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Preference number: 6 (lower is better) Translates to: PSSRLRPRSMEM*GLRMAYMTGLI Trigger: TATCAACCCGGTCATATATGCCATCCGCAACCCCAACATTTCCATGCTCCTAGGACGCAACCGCGAAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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| CDS TCA 72 bp | GGTTTCAGAATTATGCAGTTTGCCGACTTCCATAACTaGGTCCGGTGGACCCTCTCGGAAGAAGAGCACAAC | + |
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Preference number: 6 (lower is better) Translates to: GFRIMQFADFHN*VRWTLSEEEHN Trigger: GTTGTGCTCTTCTTCCGAGAGGGTCCACCGGACTCAGTTATGGAAGTCGGCAAACTGCATAATTCTGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050649.6 |
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