Pregenerated sensors for GPR12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041468Ensembl transcript IDs: ENSMUST00000036211.8, ENSMUST00000197431.2, ENSMUST00000197825.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGCTTGTGAGATCCAGTGCAAAGAATTTAAGGAAGGAAATCACTaGCCGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCGTCCTA | + |
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Preference number: 1 (lower is better) Translates to: SACEIQCKEFKEGNH*PPWEVGALGRGSVL Trigger: TAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATTTCCTTCCTTAAATTCTTTGCACTGGATCTCACAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| 3UTR GCA 90 bp | AATACGTGTCTAAAAGATGTCATTGCTTCTGCTTGTGAGATCCAGTaGAAAGAATTTAAGGAAGGAAATCACTGGCCGCCCTGGGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: NTCLKDVIASACEIQ*KEFKEGNHWPPWEV Trigger: CACCTCCCAGGGCGGCCAGTGATTTCCTTCCTTAAATTCTTTGCACTGGATCTCACAAGCAGAAGCAATGACATCTTTTAGACACGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTAAAAGATGTCATTGCTTCTGCTTGTGAGATCCAGTGCAAAGAATTTAAGAATCACTGGCCGCCCTaGGAGGTGGGAGCGCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: CLKDVIASACEIQCKEFKNHWPP*EVGALG Trigger: ACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATT...CTTAAATTCTTTGCACTGGATCTCACAAGCAGAAGCAATGACATCTTTTAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTCATGGCCACATGAGGTCCCATTACACCCTCCAAACAAACAAACAAGCAAAAAAACACTGGTAAGATaGTTTCCACTGTCAATACGT | + |
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Preference number: 2 (lower is better) Translates to: ISWPHEVPLHPPNKQTSKKTLVR*FPLSIR Trigger: ACGTATTGACAGTGGAAATCATCTTACCAGTGTTTT...TTTGCTTGTTTGTTTGTTTGGAGGGTGTAATGGGACCTCATGTGGCCATGAAAT 40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| 3UTR CCA 72 bp | TGCAAAGAATTTAAGGAAGGAAATCACTGGCCGCCCTaGGAGGTGGGAGCGCTTGGTAGAGGCAGCGTCCTA | + |
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Preference number: 3 (lower is better) Translates to: CKEFKEGNHWPP*EVGALGRGSVL Trigger: TAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATTTCCTTCCTTAAATTCTTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCGAGACTTTTGTATAATTTCATGGCCACATGAGGTCCCATTACACCCTCCAGGGAGGTGGGAGCGCTaGGTAGAGGCAGCGTCCTAT | + |
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Preference number: 3 (lower is better) Translates to: SRDFCIISWPHEVPLHPPGRWER*VEAASY Trigger: ATAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCC...TGGAGGGTGTAATGGGACCTCATGTGGCCATGAAATTATACAAAAGTCTCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTCCAAACAAACAAACAAGCAAACAAACAAACAAATCCTAACTCCCAAACCAGGGAGGTGGGAGCGCTaGGTAGAGGCAGCGTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: PSKQTNKQTNKQILTPKPGRWER*VEAASY Trigger: ATAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCC...TGGTTTGGGAGTTAGGATTTGTTTGTTTGTTTGCTTGTTTGTTTGTTTGGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| 3UTR TCA 72 bp | AACTGCAAAGTGATTCTTAAGAGCAGTCACTACTGCTaGAAGGAAAGAAAGGAGTTCGCGCCTCTGTTACTG | + |
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Preference number: 3 (lower is better) Translates to: NCKVILKSSHYC*KERKEFAPLLL Trigger: CAGTAACAGAGGCGCGAACTCCTTTCTTTCCTTTCAGCAGTAGTGACTGCTCTTAAGAATCACTTTGCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036211.8 |
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| 3UTR TCA 72 bp | AAGGAGTTCGCGCCTCTGTTACTGGTCACTTATTACTaGATTCCTAGAAATAAACACAAGCCCTTCCAAATG | + |
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Preference number: 3 (lower is better) Translates to: KEFAPLLLVTYY*IPRNKHKPFQM Trigger: CATTTGGAAGGGCTTGTGTTTATTTCTAGGAATTCAGTAATAAGTGACCAGTAACAGAGGCGCGAACTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036211.8 |
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| 3UTR TCA 72 bp | AAAATCCCGAGACTTTTGTATAATTTCATGGCCACATaGGGTCCCATTACACCCTCCAAACAAACAAACAAG | + |
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Preference number: 3 (lower is better) Translates to: KIPRLLYNFMAT*GPITPSKQTNK Trigger: CTTGTTTGTTTGTTTGGAGGGTGTAATGGGACCTCATGTGGCCATGAAATTATACAAAAGTCTCGGGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR CCA 90 bp | AAGGAAGGAAATCACTGGCCGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCTCCGCAACAGAGCCCTaGGAGGGGACAGCGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KEGNHWPPWEVGALGRGSSATEP*EGTAAE Trigger: CTCAGCCGCTGTCCCCTCCCAGGGCTCTGTTGCGGA...GCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATTTCCTTCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | GGAAATCACTGGCCGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCGTCCTATGCTGCAGGGCTATCTaGTGGGCGTGCCTCATCACA | + |
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Preference number: 4 (lower is better) Translates to: GNHWPPWEVGALGRGSVLCCRAI*WACLIT Trigger: TGTGATGAGGCACGCCCATCAGATAGCCCTGCAGCA...TAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | AAGGAAGGAAATCACTGGCCGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCCAATGTCCCAGGGGTTaGCAACGAGCTCGGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KEGNHWPPWEVGALGRGSQCPRG*QRARVL Trigger: CAGAACCCGAGCTCGTTGTCAACCCCTGGGACATTG...GCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATTTCCTTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | AAGGAAGGAAATCACTGGCCGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCTGCTGCAGGGCTATCTaGTGGGCGTGCCTCATCACA | + |
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Preference number: 4 (lower is better) Translates to: KEGNHWPPWEVGALGRGSCCRAI*WACLIT Trigger: TGTGATGAGGCACGCCCATCAGATAGCCCTGCAGCA...GCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATTTCCTTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | CGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCGTCCTATGAGGAGAAGGCTTGCACCCACAGCAAATaGGGCAGAGGGCTTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RPGRWERLVEAASYEEKACTHSK*GRGLSG Trigger: TCCAGAAAGCCCTCTGCCTCATTTGCTGTGGGTGCA...AGCCTTCTCCTCATAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | CGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCGTCCTATGAGGAGAAGGCTGCAGCCCGCTTAAATTaGCCTTCGGGTCTTCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RPGRWERLVEAASYEEKAAARLN*PSGLRS Trigger: TGAACGAAGACCCGAAGGTCAATTTAAGCGGGCTGC...AGCCTTCTCCTCATAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | CGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCGTCCTATGAGGAGAAGGCTTCAAGGAATAGAGGGTaGAAGGCATCCAGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RPGRWERLVEAASYEEKASRNRG*KASSRQ Trigger: CTGCCTGCTGGATGCCTTTCACCCTCTATTCCTTGA...AGCCTTCTCCTCATAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | AGTGCAAAGAATTTAAGGAAGGAAATCACTGGCCGCCCTGGGAGGTGGGAGCGCGGAGGGGACAGCGGCTaGGATGTTCTCTGGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: SAKNLRKEITGRPGRWERGGDSG*DVLWST Trigger: GGTGCTCCAGAGAACATCTCAGCCGCTGTCCCCTCC...GCGCTCCCACCTCCCAGGGCGGCCAGTGATTTCCTTCCTTAAATTCTTTGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | AAGGAAGGAAATCACTGGCCGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCCAGCTTGGTGGCTTCTaGCTGAAGCAGGTACGCAAA | + |
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Preference number: 4 (lower is better) Translates to: KEGNHWPPWEVGALGRGSQLGGF*LKQVRK Trigger: TTTGCGTACCTGCTTCAGTCAGAAGCCACCAAGCTG...GCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATTTCCTTCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | GAAATCACTGGCCGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCGTCCTATTCAAGGAATAGAGGGTaGAAGGCATCCAGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EITGRPGRWERLVEAASYSRNRG*KASSRQ Trigger: CTGCCTGCTGGATGCCTTTCACCCTCTATTCCTTGA...ATAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | GAAATCACTGGCCGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCGTCCTATCATTTTCACAGCAGATaGGGGTTCCTGAGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: EITGRPGRWERLVEAASYHFHSR*GFLSCT Trigger: TGTGCAGCTCAGGAACCCTCATCTGCTGTGAAAATG...ATAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR GCA 90 bp | AGTGCAAAGAATTTAAGGAAGGAAATCACTGGCCGCCCTGGGAGGTGGGAGCGCGCCAGCCAGCAGGTCTaGAAGAGCCAGGCTGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: SAKNLRKEITGRPGRWERASQQV*KSQAAY Trigger: ATAGGCAGCCTGGCTCTTGCAGACCTGCTGGCTGGC...GCGCTCCCACCTCCCAGGGCGGCCAGTGATTTCCTTCCTTAAATTCTTTGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR GCA 90 bp | AGATCCAGTGCAAAGAATTTAAGGAAGGAAATCACTGGCCGCCCTGGGAGGTGGGCCAGCCAGCAGGTCTaGAAGAGCCAGGCTGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: RSSAKNLRKEITGRPGRWASQQV*KSQAAY Trigger: ATAGGCAGCCTGGCTCTTGCAGACCTGCTGGCTGGC...CCACCTCCCAGGGCGGCCAGTGATTTCCTTCCTTAAATTCTTTGCACTGGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | TCCCGAGACTTTTGTATAATTTCATGGCCACATGAGGTCCCATTACACCCTCCACAAAGGTCCCTAGGATaGGAGCCAGGGTCGAGACCC | + |
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Preference number: 4 (lower is better) Translates to: SRDFCIISWPHEVPLHPPQRSLG*EPGSRP Trigger: GGGTCTCGACCCTGGCTCTCATCCTAGGGACCTTTG...TGGAGGGTGTAATGGGACCTCATGTGGCCATGAAATTATACAAAAGTCTCGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR CCA 90 bp | ATTTCATGGCCACATGAGGTCCCATTACACCCTCCAAACAAACAAACAAGCAAATCCGCAACAGAGCCCTaGGAGGGGACAGCGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ISWPHEVPLHPPNKQTSKSATEP*EGTAAE Trigger: CTCAGCCGCTGTCCCCTCCCAGGGCTCTGTTGCGGA...TTTGCTTGTTTGTTTGTTTGGAGGGTGTAATGGGACCTCATGTGGCCATGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR CCA 90 bp | CTTCTGCTTGTGAGATCCAGTGCAAAGAATTTAAGGAAGGAAATCACTGGCCGCCTATCAGTAGGAACATaGGGGCTCGCAGGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LLLVRSSAKNLRKEITGRLSVGT*GLAGWG Trigger: GCCCCAGCCTGCGAGCCCCCATGTTCCTACTGATAG...GCGGCCAGTGATTTCCTTCCTTAAATTCTTTGCACTGGATCTCACAAGCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | ATTTCATGGCCACATGAGGTCCCATTACACCCTCCAAACAAACAAACAAGCAAAGGAGGGGACAGCGGCTaGGATGTTCTCTGGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: ISWPHEVPLHPPNKQTSKGGDSG*DVLWST Trigger: GGTGCTCCAGAGAACATCTCAGCCGCTGTCCCCTCC...TTTGCTTGTTTGTTTGTTTGGAGGGTGTAATGGGACCTCATGTGGCCATGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | TCTGCTTGTGAGATCCAGTGCAAAGAATTTAAGGAAGGAAATCACTGGCCGCCCGCAGCCCGCTTAAATTaGCCTTCGGGTCTTCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SACEIQCKEFKEGNHWPPAARLN*PSGLRS Trigger: TGAACGAAGACCCGAAGGTCAATTTAAGCGGGCTGC...GGGCGGCCAGTGATTTCCTTCCTTAAATTCTTTGCACTGGATCTCACAAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | AGATCCAGTGCAAAGAATTTAAGGAAGGAAATCACTGGCCGCCCTGGGAGGTGGTTGGTGGCTTCTGACTaGAGCAGGTACGCAAAAACA | + |
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Preference number: 4 (lower is better) Translates to: RSSAKNLRKEITGRPGRWLVASD*SRYAKT Trigger: TGTTTTTGCGTACCTGCTTCAGTCAGAAGCCACCAA...CCACCTCCCAGGGCGGCCAGTGATTTCCTTCCTTAAATTCTTTGCACTGGATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | ATTTCATGGCCACATGAGGTCCCATTACACCCTCCAAACAAACAAACAAGCAAACAAAGGTCCCTAGGATaGGAGCCAGGGTCGAGACCC | + |
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Preference number: 4 (lower is better) Translates to: ISWPHEVPLHPPNKQTSKQRSLG*EPGSRP Trigger: GGGTCTCGACCCTGGCTCTCATCCTAGGGACCTTTG...TTTGCTTGTTTGTTTGTTTGGAGGGTGTAATGGGACCTCATGTGGCCATGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | GCTTCTGCTTGTGAGATCCAGTGCAAAGAATTTAAGGAAGGAAATCACTGGCCGCAGCTTGGTGGCTTCTaGCTGAAGCAGGTACGCAAA | + |
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Preference number: 4 (lower is better) Translates to: ASACEIQCKEFKEGNHWPQLGGF*LKQVRK Trigger: TTTGCGTACCTGCTTCAGTCAGAAGCCACCAAGCTG...CGGCCAGTGATTTCCTTCCTTAAATTCTTTGCACTGGATCTCACAAGCAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | CTACTGCTGAAAGGAAAGAAAGGAGTTCGCGCCTCTGTTACTGGTCACTTATTATGCACCCACAGCAAATaGGGCAGAGGGCTTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLLKGKKGVRASVTGHLLCTHSK*GRGLSG Trigger: TCCAGAAAGCCCTCTGCCTCATTTGCTGTGGGTGCA...TAATAAGTGACCAGTAACAGAGGCGCGAACTCCTTTCTTTCCTTTCAGCAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036211.8 |
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| CDS-3UTR CCA 90 bp | AAGATGTCATTGCTTCTGCTTGTGAGATCCAGTGCAAAGAATTTAAGGAAGGAACTATCAGTAGGAACATaGGGGCTCGCAGGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: KMSLLLLVRSSAKNLRKELSVGT*GLAGWG Trigger: GCCCCAGCCTGCGAGCCCCCATGTTCCTACTGATAG...TTCCTTCCTTAAATTCTTTGCACTGGATCTCACAAGCAGAAGCAATGACATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | CTACTGCTGAAAGGAAAGAAAGGAGTTCGCGCCTCTGTTACTGGTCACTTATTACATTTTCACAGCAGATaGGGGTTCCTGAGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: LLLKGKKGVRASVTGHLLHFHSR*GFLSCT Trigger: TGTGCAGCTCAGGAACCCTCATCTGCTGTGAAAATG...TAATAAGTGACCAGTAACAGAGGCGCGAACTCCTTTCTTTCCTTTCAGCAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036211.8 |
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| CDS-3UTR TCA 90 bp | TCCCGAGACTTTTGTATAATTTCATGGCCACATGAGGTCCCATTACACCCTCCAGCATCAGAGCAAACATaGAGAGGAAGGAGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SRDFCIISWPHEVPLHPPASEQT*RGRRWR Trigger: TCTCCATCTCCTTCCTCTTCATGTTTGCTCTGATGC...TGGAGGGTGTAATGGGACCTCATGTGGCCATGAAATTATACAAAAGTCTCGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | GCTTCTGCTTGTGAGATCCAGTGCAAAGAATTTAAGGAAGGAAATCACTGGCCGGCATCAGAGCAAACATaGAGAGGAAGGAGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ASACEIQCKEFKEGNHWPASEQT*RGRRWR Trigger: TCTCCATCTCCTTCCTCTTCATGTTTGCTCTGATGC...CGGCCAGTGATTTCCTTCCTTAAATTCTTTGCACTGGATCTCACAAGCAGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR TCA 90 bp | CCTAACTCCCAAACCAAACAACAGAATGCTGAGCCGAGAAGTCGAGTTTTGTTTTTGGTGGCTTCTGACTaGAGCAGGTACGCAAAAACA | + |
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Preference number: 4 (lower is better) Translates to: PNSQTKQQNAEPRSRVLFLVASD*SRYAKT Trigger: TGTTTTTGCGTACCTGCTTCAGTCAGAAGCCACCAA...AAACAAAACTCGACTTCTCGGCTCAGCATTCTGTTGTTTGGTTTGGGAGTTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR GCA 90 bp | AAGATGTCATTGCTTCTGCTTGTGAGATCCAGTGCAAAGAATTTAAGGAAGGAACTGCAAGAGCCAGGCTaGCTATCAGTAGGAACATGG | + |
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Preference number: 4 (lower is better) Translates to: KMSLLLLVRSSAKNLRKELQEPG*LSVGTW Trigger: CCATGTTCCTACTGATAGGCAGCCTGGCTCTTGCAG...TTCCTTCCTTAAATTCTTTGCACTGGATCTCACAAGCAGAAGCAATGACATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR GCA 90 bp | CCCTCCAAACAAACAAACAAGCAAACAAACAAACAAATCCTAACTCCCAAACCACTGCAAGAGCCAGGCTaGCTATCAGTAGGAACATGG | + |
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Preference number: 4 (lower is better) Translates to: PSKQTNKQTNKQILTPKPLQEPG*LSVGTW Trigger: CCATGTTCCTACTGATAGGCAGCCTGGCTCTTGCAG...TGGTTTGGGAGTTAGGATTTGTTTGTTTGTTTGCTTGTTTGTTTGTTTGGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS CCA 90 bp | CAGGGGTTGACAACGAGCTCGGGTTCTGACTCCGCAACAGAGCCCTaGGAGGGGACAGCGGCTGAGATGTTCTCTGGAGCACCGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: QGLTTSSGSDSATEP*EGTAAEMFSGAPAS Trigger: AGATGCCGGTGCTCCAGAGAACATCTCAGCCGCTGTCCCCTCCCAGGGCTCTGTTGCGGAGTCAGAACCCGAGCTCGTTGTCAACCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 ENSMUST00000197825.2 |
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| CDS-3UTR CAA 90 bp | CGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCGTCCTATGAGGAGAAGGCTACAATGTCCCAGGGGTaGACAACGAGCTCGGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: RPGRWERLVEAASYEEKATMSQG*TTSSGS Trigger: AGAACCCGAGCTCGTTGTCAACCCCTGGGACATTGT...AGCCTTCTCCTCATAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR CAA 90 bp | GAAATCACTGGCCGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCGTCCTATGGCAGCCCGCTTAAATaGACCTTCGGGTCTTCGTTC | + |
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Preference number: 5 (lower is better) Translates to: EITGRPGRWERLVEAASYGSPLK*TFGSSF Trigger: GAACGAAGACCCGAAGGTCAATTTAAGCGGGCTGCC...ATAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR CAA 90 bp | GGAAATCACTGGCCGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCGTCCTATACGCAAAAACAAAATaGATGATGAGTCCCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: GNHWPPWEVGALGRGSVLYAKTK*MMSPRP Trigger: TGGCCTGGGACTCATCATCAATTTTGTTTTTGCGTA...TAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR CAA 90 bp | GGAAATCACTGGCCGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCGTCCTAGGCTTTCTGGATCTCTaGGTTTCTGAAAGCGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: GNHWPPWEVGALGRGSVLGFLDL*VSESVN Trigger: ATTTACGCTTTCAGAAACCAAGAGATCCAGAAAGCC...TAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR CAA 90 bp | GAAATCACTGGCCGCCCTGGGAGGTGGGAGCGCTTGGTAGAGGCAGCGTCCTATGGCTTTCTGGATCTCTaGGTTTCTGAAAGCGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: EITGRPGRWERLVEAASYGFLDL*VSESVN Trigger: ATTTACGCTTTCAGAAACCAAGAGATCCAGAAAGCC...ATAGGACGCTGCCTCTACCAAGCGCTCCCACCTCCCAGGGCGGCCAGTGATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS TCA 90 bp | GATGATAAGGACCACAACGGCATTTTCACAGCAGATGAGGGTTCCTaGGCTGCACAAGACAATGTCCCAGGGGTTGACAACGAGCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: DDKDHNGIFTADEGS*AAQDNVPGVDNELG Trigger: CCCGAGCTCGTTGTCAACCCCTGGGACATTGTCTTGTGCAGCTCAGGAACCCTCATCTGCTGTGAAAATGCCGTTGTGGTCCTTATCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 ENSMUST00000197825.2 |
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| CDS TCA 90 bp | GAGGCGACAATGAGTCCGATGGTGACCAGCTTGGTGGCTTCTGACTaGAGCAGGTACGCAAAAACAAAATTGATGATGAGTCCCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: EATMSPMVTSLVASD*SRYAKTKLMMSPRP Trigger: TGGCCTGGGACTCATCATCAATTTTGTTTTTGCGTACCTGCTTCAGTCAGAAGCCACCAAGCTGGTCACCATCGGACTCATTGTCGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 ENSMUST00000197825.2 |
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| CDS-3UTR CAA 90 bp | CTTCTGCTTGTGAGATCCAGTGCAAAGAATTTAAGGAAGGAAATCACTGGCCGCGGCAGCCCGCTTAAATaGACCTTCGGGTCTTCGTTC | + |
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Preference number: 5 (lower is better) Translates to: LLLVRSSAKNLRKEITGRGSPLK*TFGSSF Trigger: GAACGAAGACCCGAAGGTCAATTTAAGCGGGCTGCC...GCGGCCAGTGATTTCCTTCCTTAAATTCTTTGCACTGGATCTCACAAGCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR CAA 90 bp | TCCCGAGACTTTTGTATAATTTCATGGCCACATGAGGTCCCATTACACCCTCCAACAATGTCCCAGGGGTaGACAACGAGCTCGGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SRDFCIISWPHEVPLHPPTMSQG*TTSSGS Trigger: AGAACCCGAGCTCGTTGTCAACCCCTGGGACATTGT...TGGAGGGTGTAATGGGACCTCATGTGGCCATGAAATTATACAAAAGTCTCGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS TCA 90 bp | GAAAGAGGCGACAATGAGTCCGATGGTGACCAGCTTGGTGGCTTCTaGCTGAAGCAGGTACGCAAAAACAAAATTGATGATGAGTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ERGDNESDGDQLGGF*LKQVRKNKIDDESQ Trigger: CTGGGACTCATCATCAATTTTGTTTTTGCGTACCTGCTTCAGTCAGAAGCCACCAAGCTGGTCACCATCGGACTCATTGTCGCCTCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 ENSMUST00000197825.2 |
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| CDS-3UTR CAA 90 bp | CCTAACTCCCAAACCAAACAACAGAATGCTGAGCCGAGAAGTCGAGTTTTGTTTGAGAGGATGGCAGCGTaGTTCTTAGTGAGAGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: PNSQTKQQNAEPRSRVLFERMAA*FLVRGL Trigger: CAGACCTCTCACTAAGAACAACGCTGCCATCCTCTC...AAACAAAACTCGACTTCTCGGCTCAGCATTCTGTTGTTTGGTTTGGGAGTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS-3UTR CAA 90 bp | ATTTCATGGCCACATGAGGTCCCATTACACCCTCCAAACAAACAAACAAGCAAAGAGAGGATGGCAGCGTaGTTCTTAGTGAGAGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: ISWPHEVPLHPPNKQTSKERMAA*FLVRGL Trigger: CAGACCTCTCACTAAGAACAACGCTGCCATCCTCTC...TTTGCTTGTTTGTTTGTTTGGAGGGTGTAATGGGACCTCATGTGGCCATGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS TCA 72 bp | AAGGGTAGGTGTAATCGGCGATCAAGGAATAGAGGGTaGAAGGCATCCAGCAGGCAGCAAAGGTCCCTAGGA | + |
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Preference number: 6 (lower is better) Translates to: KGRCNRRSRNRG*KASSRQQRSLG Trigger: TCCTAGGGACCTTTGCTGCCTGCTGGATGCCTTTCACCCTCTATTCCTTGATCGCCGATTACACCTACCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 |
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| CDS TCA 72 bp | ATGAGTCCGATGGTGACCAGCTTGGTGGCTTCTGACTaGAGCAGGTACGCAAAAACAAAATTGATGATGAGT | + |
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Preference number: 6 (lower is better) Translates to: MSPMVTSLVASD*SRYAKTKLMMS Trigger: ACTCATCATCAATTTTGTTTTTGCGTACCTGCTTCAGTCAGAAGCCACCAAGCTGGTCACCATCGGACTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 ENSMUST00000197825.2 |
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| CDS TCA 72 bp | GACAATGAGTCCGATGGTGACCAGCTTGGTGGCTTCTaGCTGAAGCAGGTACGCAAAAACAAAATTGATGAT | + |
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Preference number: 6 (lower is better) Translates to: DNESDGDQLGGF*LKQVRKNKIDD Trigger: ATCATCAATTTTGTTTTTGCGTACCTGCTTCAGTCAGAAGCCACCAAGCTGGTCACCATCGGACTCATTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036211.8 ENSMUST00000197431.2 ENSMUST00000197825.2 |
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