RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR107 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000000194

Ensembl transcript IDs: ENSMUST00000056433.7

Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGATACTGCTGTAGCACACCTCCCAGCCCGTGCACCCATGCCCTaGAAGGAGCAGGCTGTCCCTCCACCCGCTCGGCTGTGCACCCAG +
Preference number: 1 (lower is better)
Translates to: EDTAVAHLPARAPMP*KEQAVPPPARLCTQ
Trigger: CTGGGTGCACAGCCGAGCGGGTGGAGGGACAGCCTGCTCCTTCCAGGGCATGGGTGCACGGGCTGGGAGGTGTGCTACAGCAGTATCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 90 bp CCCATGCCCTGGAAGGAGCAGGCTGTCCCTCCACCCGCTCGGCTGTaGACCCAGACAGCTCTGTGGGCTGGGTGGTACAACTTCTCCCCT +
Preference number: 1 (lower is better)
Translates to: PMPWKEQAVPPPARL*TQTALWAGWYNFSP
Trigger: AGGGGAGAAGTTGTACCACCCAGCCCACAGAGCTGTCTGGGTGCACAGCCGAGCGGGTGGAGGGACAGCCTGCTCCTTCCAGGGCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 90 bp GGGCAAGACTTGGGAGGATACTGCTGTAGCACACCTCCCAGCCCGTaGACCCATGCCCTGGAAGGAGCAGGCTGTCCCTCCACCCGCTCG +
Preference number: 1 (lower is better)
Translates to: GQDLGGYCCSTPPSP*THALEGAGCPSTRS
Trigger: CGAGCGGGTGGAGGGACAGCCTGCTCCTTCCAGGGCATGGGTGCACGGGCTGGGAGGTGTGCTACAGCAGTATCCTCCCAAGTCTTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp GCGGCTGCTCTGGGCAGGCAGGGGAATGGAGTCAGGAGAGCCAGCTaGAGCGCACTTCTGGAGCTCCAAGGCCTTTCTCCCTTCAGCCAG +
Preference number: 1 (lower is better)
Translates to: AAALGRQGNGVRRAS*SALLELQGLSPFSQ
Trigger: CTGGCTGAAGGGAGAAAGGCCTTGGAGCTCCAGAAGTGCGCTCCAGCTGGCTCTCCTGACTCCATTCCCCTGCCTGCCCAGAGCAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 90 bp AGAGGGGTGAGAGGAGGACGCGAGGACCAAGGGAAGCAGAAATCCTaGGAGCACTTCAGGAGTTGGGCAGCCCTGGCTGGCTGCACAGGC +
Preference number: 1 (lower is better)
Translates to: RGVRGGREDQGKQKS*EHFRSWAALAGCTG
Trigger: GCCTGTGCAGCCAGCCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCTCGCGTCCTCCTCTCACCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp GCCAGGTGGGCTAAGACTCAAGGCTGCAGAGGACAGCTCGTGAGCTaGGGCGGCTGGACTCCAATCAGACTCCTCTACCCAAGGACACCG +
Preference number: 1 (lower is better)
Translates to: ARWAKTQGCRGQLVS*GGWTPIRLLYPRTP
Trigger: CGGTGTCCTTGGGTAGAGGAGTCTGATTGGAGTCCAGCCGCCCCAGCTCACGAGCTGTCCTCTGCAGCCTTGAGTCTTAGCCCACCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp GCAGGCAGGGGAATGGAGTCAGGAGAGCCAGCTGGAGCGCACTTCTaGAGCTCCAAGGCCTTTCTCCCTTCAGCCAGCTGTGTACTGGGT +
Preference number: 1 (lower is better)
Translates to: AGRGMESGEPAGAHF*SSKAFLPSASCVLG
Trigger: ACCCAGTACACAGCTGGCTGAAGGGAGAAAGGCCTTGGAGCTCCAGAAGTGCGCTCCAGCTGGCTCTCCTGACTCCATTCCCCTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp TGTCCCTCCACCCGCTCGGCTGTGCACCCAGACAGCTCTGTGGGCTaGGTGGTACAACTTCTCCCCTCTGGCTCTCCTAAAACCCAGCAA +
Preference number: 1 (lower is better)
Translates to: CPSTRSAVHPDSSVG*VVQLLPSGSPKTQQ
Trigger: TTGCTGGGTTTTAGGAGAGCCAGAGGGGAGAAGTTGTACCACCCAGCCCACAGAGCTGTCTGGGTGCACAGCCGAGCGGGTGGAGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 90 bp GTGAAGCCAGGTGGGCTAAGACTCAAGGCTGCAGAGGACAGCTCGTaGGCTGGGGCGGCTGGACTCCAATCAGACTCCTCTACCCAAGGA +
Preference number: 1 (lower is better)
Translates to: VKPGGLRLKAAEDSS*AGAAGLQSDSSTQG
Trigger: TCCTTGGGTAGAGGAGTCTGATTGGAGTCCAGCCGCCCCAGCTCACGAGCTGTCCTCTGCAGCCTTGAGTCTTAGCCCACCTGGCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp CACTTGCTCAGCATGAGCGCTGAGCGCTGGCTGGAGTGTCACCGCTaGGAGATGCCATCGTTCTGTCAGGAACGCGCTTGCTCACTGCTT +
Preference number: 1 (lower is better)
Translates to: HLLSMSAERWLECHR*EMPSFCQERACSLL
Trigger: AAGCAGTGAGCAAGCGCGTTCCTGACAGAACGATGGCATCTCCCAGCGGTGACACTCCAGCCAGCGCTCAGCGCTCATGCTGAGCAAGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp CTCACCTGCAAGTCCTGGGCACTAAGCGGCTCTGAGGTGCCGAACTaGTCTCCTGTGACTTTGTCACATGCCTTCTGCAGGCAGCCGCTG +
Preference number: 1 (lower is better)
Translates to: LTCKSWALSGSEVPN*SPVTLSHAFCRQPL
Trigger: CAGCGGCTGCCTGCAGAAGGCATGTGACAAAGTCACAGGAGACCAGTTCGGCACCTCAGAGCCGCTTAGTGCCCAGGACTTGCAGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 90 bp ACTGAAACAGGGCTGTGTGAAGCCAGGTGGGCTAAGACTCAAGGCTaGAGAGGACAGCTCGTGAGCTGGGGCGGCTGGACTCCAATCAGA +
Preference number: 1 (lower is better)
Translates to: TETGLCEARWAKTQG*RGQLVSWGGWTPIR
Trigger: TCTGATTGGAGTCCAGCCGCCCCAGCTCACGAGCTGTCCTCTGCAGCCTTGAGTCTTAGCCCACCTGGCTTCACACAGCCCTGTTTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp CCAGCAGCTTGGCAGAGCGAGGTTGTCCTTCTGGGTGTGTGGAACTaGGCCAGCAACCCCATCAGACTAATGCTTCCTCAAGGACCACGC +
Preference number: 1 (lower is better)
Translates to: PAAWQSEVVLLGVWN*ASNPIRLMLPQGPR
Trigger: GCGTGGTCCTTGAGGAAGCATTAGTCTGATGGGGTTGCTGGCCCAGTTCCACACACCCAGAAGGACAACCTCGCTCTGCCAAGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp CAACACATGGGCTTTACCACTGAAACAGGGCTGTGTGAAGCCAGGTaGGCTAAGACTCAAGGCTGCAGAGGACAGCTCGTGAGCTGGGGC +
Preference number: 1 (lower is better)
Translates to: QHMGFTTETGLCEAR*AKTQGCRGQLVSWG
Trigger: GCCCCAGCTCACGAGCTGTCCTCTGCAGCCTTGAGTCTTAGCCCACCTGGCTTCACACAGCCCTGTTTCAGTGGTAAAGCCCATGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp GGGCGAGGACATTTAGAGTGGTGCTTGGGGACCAGTGGCCCTCCCTaGACAGGTGTCATGCCACCTAGGGTGTCTATTTGGCTATCTGAA +
Preference number: 1 (lower is better)
Translates to: GRGHLEWCLGTSGPP*TGVMPPRVSIWLSE
Trigger: TTCAGATAGCCAAATAGACACCCTAGGTGGCATGACACCTGTCCAGGGAGGGCCACTGGTCCCCAAGCACCACTCTAAATGTCCTCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 90 bp ACCCAGCAAGTGAAACGAGGCCCCTTCCAAAAAGACCCTGCCCTCTaGGAGGCAGGCTGTGGCTTAGATGTCACCAGAGGAACACACTTC +
Preference number: 1 (lower is better)
Translates to: TQQVKRGPFQKDPAL*EAGCGLDVTRGTHF
Trigger: GAAGTGTGTTCCTCTGGTGACATCTAAGCCACAGCCTGCCTCTCAGAGGGCAGGGTCTTTTTGGAAGGGGCCTCGTTTCACTTGCTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp TTCAGGAAAGTTCTGTTTTCTCGGATTCGGATCAGAAGACACAGGTaGAAGGAGAGGAAGCCAGGCGGCTGCTCTGGGCAGGCAGGGGAA +
Preference number: 1 (lower is better)
Translates to: FRKVLFSRIRIRRHR*KERKPGGCSGQAGE
Trigger: TTCCCCTGCCTGCCCAGAGCAGCCGCCTGGCTTCCTCTCCTTCCACCTGTGTCTTCTGATCCGAATCCGAGAAAACAGAACTTTCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp CGGCTTCTCACTGATGGCTTAGGACATGGACTTGGGCTGGGGGTGTaGAGACAGACACACTGTCTTCAGGACAGAGATCTTCTGCACTGG +
Preference number: 1 (lower is better)
Translates to: RLLTDGLGHGLGLGV*RQTHCLQDRDLLHW
Trigger: CCAGTGCAGAAGATCTCTGTCCTGAAGACAGTGTGTCTGTCTCCACACCCCCAGCCCAAGTCCATGTCCTAAGCCATCAGTGAGAAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp CTTACAGTGCAGGATAAAGGGCTAGAAGCTTTCCTTTCCACAGCCTaGGCACCAGGCCAGTCTTCCCAGCCCCAGGTTAGGCTTCCCATT +
Preference number: 1 (lower is better)
Translates to: LTVQDKGLEAFLSTA*APGQSSQPQVRLPI
Trigger: AATGGGAAGCCTAACCTGGGGCTGGGAAGACTGGCCTGGTGCCCAGGCTGTGGAAAGGAAAGCTTCTAGCCCTTTATCCTGCACTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 90 bp CTGGTCCTCCAGTTCCCTCCCCGTCTACTGCACCTCAACTCCAAATaGGCATCCTGTCTCAGGAATGTGTCTGCCTCACTCTGCTCTGTA +
Preference number: 1 (lower is better)
Translates to: LVLQFPPRLLHLNSK*ASCLRNVSASLCSV
Trigger: TACAGAGCAGAGTGAGGCAGACACATTCCTGAGACAGGATGCTCATTTGGAGTTGAGGTGCAGTAGACGGGGAGGGAACTGGAGGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp GGAGTTGGGCAGCCCTGGCTGGCTGCACAGGCGAGGGCTAGAGAGTaGGGACACTTAGGTATTTACTCTGAAGTGGTTTTTGAAGGAGAA +
Preference number: 1 (lower is better)
Translates to: GVGQPWLAAQARARE*GHLGIYSEVVFEGE
Trigger: TTCTCCTTCAAAAACCACTTCAGAGTAAATACCTAAGTGTCCCCACTCTCTAGCCCTCGCCTGTGCAGCCAGCCAGGGCTGCCCAACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp AAATGTCACAGCCCACAGCTTCCAGTCCACAGCACTCTCAAAGTATaGATACCTCACACAGGCAGAAGGGGGAGAGACACAGAGCAGAGC +
Preference number: 1 (lower is better)
Translates to: KCHSPQLPVHSTLKV*IPHTGRRGRDTEQS
Trigger: GCTCTGCTCTGTGTCTCTCCCCCTTCTGCCTGTGTGAGGTATCCATACTTTGAGAGTGCTGTGGACTGGAAGCTGTGGGCTGTGACATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 90 bp GCTCAAACACACTCACTCCCTTCATGCATACTTGGACTACGTAGTTaGGGCTCAGAGGTCCTGCCTGGCCCATGCAATCTGTGGAAGGAT +
Preference number: 1 (lower is better)
Translates to: AQTHSLPSCILGLRS*GSEVLPGPCNLWKD
Trigger: ATCCTTCCACAGATTGCATGGGCCAGGCAGGACCTCTGAGCCTCAACTACGTAGTCCAAGTATGCATGAAGGGAGTGAGTGTGTTTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 90 bp TTGAGGCTCAGAGGTCCTGCCTGGCCCATGCAATCTGTGGAAGGATaGTTACCTAAGCGTTCGTTTAGACACTACCCTTTCTGTCCTCAG +
Preference number: 1 (lower is better)
Translates to: LRLRGPAWPMQSVEG*LPKRSFRHYPFCPQ
Trigger: CTGAGGACAGAAAGGGTAGTGTCTAAACGAACGCTTAGGTAAGCATCCTTCCACAGATTGCATGGGCCAGGCAGGACCTCTGAGCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 90 bp ACTTGCTTTAGACTGCACTCCAAGAGCCAGACAGGCATTGCGGTGTaGGGAGATCACCATGTGGTCAGAGCAGCAATACACAGAGTGAGT +
Preference number: 1 (lower is better)
Translates to: TCFRLHSKSQTGIAV*GDHHVVRAAIHRVS
Trigger: ACTCACTCTGTGTATTGCTGCTCTGACCACATGGTGATCTCCGCACACCGCAATGCCTGTCTGGCTCTTGGAGTGCAGTCTAAAGCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 90 bp TTGCACTCTCTTGATAAAATGCTCCCTGGTTTAGAAAATACATTCTaGACGCAGCTGCAGGCAGCCAATGCTGCAGTGCACCAGCCTGCG +
Preference number: 1 (lower is better)
Translates to: LHSLDKMLPGLENTF*TQLQAANAAVHQPA
Trigger: CGCAGGCTGGTGCACTGCAGCATTGGCTGCCTGCAGCTGCGTGCAGAATGTATTTTCTAAACCAGGGAGCATTTTATCAAGAGAGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp GGCAGTGCCTGGGTTTCCCTAGGACCACAGACACAAGCTTCCTCATaGAATCTTTATTGGGCGTATTTGCTTTGCAGTGAAGTGCCTCCA +
Preference number: 1 (lower is better)
Translates to: GSAWVSLGPQTQASS*NLYWAYLLCSEVPP
Trigger: TGGAGGCACTTCACTGCAAAGCAAATACGCCCAATAAAGATTCCATGAGGAAGCTTGTGTCTGTGGTCCTAGGGAAACCCAGGCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 90 bp GTCTCCCTGTGGTCAAAATCATACCAGGTCCTGACATGCCAGTCATaGCCACATCTGCTCCCAAGCTTGTTCTGTCTGTCCCTCTTTATA +
Preference number: 1 (lower is better)
Translates to: VSLWSKSYQVLTCQS*PHLLPSLFCLSLFI
Trigger: TATAAAGAGGGACAGACAGAACAAGCTTGGGAGCAGATGTGGTCATGACTGGCATGTCAGGACCTGGTATGATTTTGACCACAGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp CCAATCTCTGAGCAGATCTGGCTGTTTCAGGTCTCTGAGCATGAGTaGCTCAAACACACTCACTCCCTTCATGCATACTTGGACTACGTA +
Preference number: 1 (lower is better)
Translates to: PISEQIWLFQVSEHE*LKHTHSLHAYLDYV
Trigger: TACGTAGTCCAAGTATGCATGAAGGGAGTGAGTGTGTTTGAGCCACTCATGCTCAGAGACCTGAAACAGCCAGATCTGCTCAGAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp AGACCTCCTGCAGGTGAAACCTCTGGGCTCAGTCTGACAATTATTTaGGCCATCCAGAAAAGCTGTTTAGGGACGGAAGAGTTCCTTCAT +
Preference number: 1 (lower is better)
Translates to: RPPAGETSGLSLTII*AIQKSCLGTEEFLH
Trigger: ATGAAGGAACTCTTCCGTCCCTAAACAGCTTTTCTGGATGGCCCAAATAATTGTCAGACTGAGCCCAGAGGTTTCACCTGCAGGAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 90 bp CGGTGTGCGGAGATCACCATGTGGTCAGAGCAGCAATACACAGAGTaGGTTTGCATAGTTTGCACTCTCTTGATAAAATGCTCCCTGGTT +
Preference number: 1 (lower is better)
Translates to: RCAEITMWSEQQYTE*VCIVCTLLIKCSLV
Trigger: AACCAGGGAGCATTTTATCAAGAGAGTGCAAACTATGCAAACTCACTCTGTGTATTGCTGCTCTGACCACATGGTGATCTCCGCACACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 90 bp ATTCCATGGTTGTGGTCACCACAACATGAGGAACTGTATGAACACTaGATTTTGAGGAGGAAGCTAGGCAGTGCCTGGGTTTCCCTAGGA +
Preference number: 1 (lower is better)
Translates to: IPWLWSPQHEELYEH*ILRRKLGSAWVSLG
Trigger: TCCTAGGGAAACCCAGGCACTGCCTAGCTTCCTCCTCAAAATTCAGTGTTCATACAGTTCCTCATGTTGTGGTGACCACAACCATGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 90 bp GTTTCCCTAGGACCACAGACACAAGCTTCCTCATGGAATCTTTATTaGGCGTATTTGCTTTGCAGTGAAGTGCCTCCATATAGTGGCCAG +
Preference number: 1 (lower is better)
Translates to: VSLGPQTQASSWNLY*AYLLCSEVPPYSGQ
Trigger: CTGGCCACTATATGGAGGCACTTCACTGCAAAGCAAATACGCCCAATAAAGATTCCATGAGGAAGCTTGTGTCTGTGGTCCTAGGGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 90 bp GCTTACCTAAGCGTTCGTTTAGACACTACCCTTTCTGTCCTCAGCTaGTCCTTCAGGAAAGTTCTGTTTTCTCGGATTCGGATCAGAAGA +
Preference number: 1 (lower is better)
Translates to: AYLSVRLDTTLSVLS*SFRKVLFSRIRIRR
Trigger: TCTTCTGATCCGAATCCGAGAAAACAGAACTTTCCTGAAGGAGCAGCTGAGGACAGAAAGGGTAGTGTCTAAACGAACGCTTAGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 90 bp GCCAGTCCTGAGCACATCCAAATCCCATGCTTGGAAATATTTCAGTaGTTAATGTTAAACATTACTAAGTGGTTCCCAGTCCCTGCACCC +
Preference number: 1 (lower is better)
Translates to: ASPEHIQIPCLEIFQ*LMLNITKWFPVPAP
Trigger: GGGTGCAGGGACTGGGAACCACTTAGTAATGTTTAACATTAATCACTGAAATATTTCCAAGCATGGGATTTGGATGTGCTCAGGACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 90 bp GCGTATTTGCTTTGCAGTGAAGTGCCTCCATATAGTGGCCAGTCCTaGGCACATCCAAATCCCATGCTTGGAAATATTTCAGTGATTAAT +
Preference number: 1 (lower is better)
Translates to: AYLLCSEVPPYSGQS*AHPNPMLGNISVIN
Trigger: ATTAATCACTGAAATATTTCCAAGCATGGGATTTGGATGTGCTCAGGACTGGCCACTATATGGAGGCACTTCACTGCAAAGCAAATACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 90 bp TCTGAAAGAATTTCATTCATTTCTGTGGTTCTTGTCCCCAAAGGCTaGCAATCCCTTTCTCCTATGCCCTTGGTAGATATCTGTCTAGTT +
Preference number: 1 (lower is better)
Translates to: SERISFISVVLVPKG*QSLSPMPLVDICLV
Trigger: AACTAGACAGATATCTACCAAGGGCATAGGAGAAAGGGATTGTCAGCCTTTGGGGACAAGAACCACAGAAATGAATGAAATTCTTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 90 bp TTCAAACATGAGAGGCTGAGTCCTGTTAGAGCCAGAATTCAGAGTTaGACACTTGCTCTTGTTGTCCAAGAAATAATTATCTACCACACT +
Preference number: 1 (lower is better)
Translates to: FKHERLSPVRARIQS*TLALVVQEIIIYHT
Trigger: AGTGTGGTAGATAATTATTTCTTGGACAACAAGAGCAAGTGTTCAACTCTGAATTCTGGCTCTAACAGGACTCAGCCTCTCATGTTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp TCACAGAGCCCTAGACAGGAAAGGCGGCAGCAGTGGGCAGCGCAGGCCCCTGAGCTGGGTCCTCCCTGCTaGCCTCTAGCACCACTGGTG +
Preference number: 2 (lower is better)
Translates to: SQSPRQERRQQWAAQAPELGPPC*PLAPLV
Trigger: CACCAGTGGTGCTAGAGGCCAGCAGGGAGGACCCAG...CTCAGGGGCCTGCGCTGCCCACTGCTGCCGCCTTTCCTGTCTAGGGCTCTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 90 bp ACGCGAGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCAGGAGTaGGGCAGCCCTGGCTGGCTGCACAGGCGAGGGCTAGAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: TRGPREAEILRALQE*GSPGWLHRRGLESG
Trigger: CCCACTCTCTAGCCCTCGCCTGTGCAGCCAGCCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCTCGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp CAGTGCACCAGCCTGCGGCTGAGTATGCCAGAGAGGCCAGGGAGTCAGTGGCAAGAGCACTTCAGGAGTTaGGCAGCCCTGGCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: QCTSLRLSMPERPGSQWQEHFRS*AALAGC
Trigger: GCAGCCAGCCAGGGCTGCCCAACTCCTGAAGTGCTC...TTGCCACTGACTCCCTGGCCTCTCTGGCATACTCAGCCGCAGGCTGGTGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR GCA 90 bp AGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCAGGAGTTGGGCAGCCCTGGAGGAAGCCAGGCGGCTaGTCTGGGCAGGCAGGGGAA +
Preference number: 2 (lower is better)
Translates to: RTKGSRNPASTSGVGQPWRKPGG*SGQAGE
Trigger: TTCCCCTGCCTGCCCAGAGCAGCCGCCTGGCTTCCT...CCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR GCA 90 bp GGGGTGAGAGGAGGACGCGAGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCCCCATTCCCCCGCCATaGCTGGCTTCCCACCTACAG +
Preference number: 2 (lower is better)
Translates to: GVRGGREDQGKQKSCEHFPIPPP*LASHLQ
Trigger: CTGTAGGTGGGAAGCCAGGCATGGCGGGGGAATGGG...GAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCTCGCGTCCTCCTCTCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp TCACAGAGCCCTAGACAGGAAAGGCGGCAGCAGTGGGCAGCGCAGGCCCCTGAGCTGGAGTGTCACCGCTaGGAGATGCCATCGTTCTGT +
Preference number: 2 (lower is better)
Translates to: SQSPRQERRQQWAAQAPELECHR*EMPSFC
Trigger: ACAGAACGATGGCATCTCCCAGCGGTGACACTCCAG...CTCAGGGGCCTGCGCTGCCCACTGCTGCCGCCTTTCCTGTCTAGGGCTCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR TCA 90 bp CACAGGCAGAAGGGGGAGAGACACAGAGCAGAGCTGTTAATACCAGAGTGGCAGCAGCCTCCACAGCACTaGCCAGCGCAGACCCGCTCC +
Preference number: 2 (lower is better)
Translates to: HRQKGERHRAELLIPEWQQPPQH*PAQTRS
Trigger: GGAGCGGGTCTGCGCTGGTCAGTGCTGTGGAGGCTG...CTGCCACTCTGGTATTAACAGCTCTGCTCTGTGTCTCTCCCCCTTCTGCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp AGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCAGGAGTTGGGCAGCCCTGGAGCCACAGGGCTCCTTaGCACAGACCCAGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: RTKGSRNPASTSGVGQPWSHRAP*HRPRLP
Trigger: TGGGAGCCTGGGTCTGTGCCAAGGAGCCCTGTGGCT...CCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp GGGGTGAGAGGAGGACGCGAGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCACCAGTGGCCCTCCCTaGACAGGTGTCATGCCACCT +
Preference number: 2 (lower is better)
Translates to: GVRGGREDQGKQKSCEHFTSGPP*TGVMPP
Trigger: AGGTGGCATGACACCTGTCCAGGGAGGGCCACTGGT...GAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCTCGCGTCCTCCTCTCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp CACAGGCAGAAGGGGGAGAGACACAGAGCAGAGCTGTTAATACCAGAGTGGCAGGCCAGGCGGCTGCTCTaGGCAGGCAGGGGAATGGAG +
Preference number: 2 (lower is better)
Translates to: HRQKGERHRAELLIPEWQARRLL*AGRGME
Trigger: CTCCATTCCCCTGCCTGCCCAGAGCAGCCGCCTGGC...CTGCCACTCTGGTATTAACAGCTCTGCTCTGTGTCTCTCCCCCTTCTGCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR GCA 90 bp CAGTGCACCAGCCTGCGGCTGAGTATGCCAGAGAGGCCAGGGAGTCAGTGGCAAAAGGACACCGCGGAATaGTGGCTCACAGCTCTCAAG +
Preference number: 2 (lower is better)
Translates to: QCTSLRLSMPERPGSQWQKDTAE*WLTALK
Trigger: CTTGAGAGCTGTGAGCCAGCATTCCGCGGTGTCCTT...TTGCCACTGACTCCCTGGCCTCTCTGGCATACTCAGCCGCAGGCTGGTGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp ACGAGGCCCCTTCCAAAAAGACCCTGCCCTCTGAGAGGCAGGCTGTGGCTTAGAGTCAGGAGAGCCAGCTaGAGCGCACTTCTGGAGCTC +
Preference number: 2 (lower is better)
Translates to: TRPLPKRPCPLRGRLWLRVRRAS*SALLEL
Trigger: GAGCTCCAGAAGTGCGCTCCAGCTGGCTCTCCTGAC...TCTAAGCCACAGCCTGCCTCTCAGAGGGCAGGGTCTTTTTGGAAGGGGCCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp CTTGGCAGAGCGAGGTTGTCCTTCTGGGTGTGTGGAACTGGGCCAGCAACCCCACTCACCTGCAAGTCCTaGGCACTAAGCGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: LGRARLSFWVCGTGPATPLTCKS*ALSGSE
Trigger: CTCAGAGCCGCTTAGTGCCCAGGACTTGCAGGTGAG...TGGGGTTGCTGGCCCAGTTCCACACACCCAGAAGGACAACCTCGCTCTGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp CTTGGCAGAGCGAGGTTGTCCTTCTGGGTGTGTGGAACTGGGCCAGCAACCCCATTCCTTTCCACAGCCTaGGCACCAGGCCAGTCTTCC +
Preference number: 2 (lower is better)
Translates to: LGRARLSFWVCGTGPATPFLSTA*APGQSS
Trigger: GGAAGACTGGCCTGGTGCCCAGGCTGTGGAAAGGAA...TGGGGTTGCTGGCCCAGTTCCACACACCCAGAAGGACAACCTCGCTCTGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp GGGGTGAGAGGAGGACGCGAGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCCGAGGACATTTAGAGTaGTGCTTGGGGACCAGTGGC +
Preference number: 2 (lower is better)
Translates to: GVRGGREDQGKQKSCEHFRGHLE*CLGTSG
Trigger: GCCACTGGTCCCCAAGCACCACTCTAAATGTCCTCG...GAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCTCGCGTCCTCCTCTCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp CTTGGCAGAGCGAGGTTGTCCTTCTGGGTGTGTGGAACTGGGCCAGCAACCCCACTCAGAGGTCCTGCCTaGCCCATGCAATCTGTGGAA +
Preference number: 2 (lower is better)
Translates to: LGRARLSFWVCGTGPATPLRGPA*PMQSVE
Trigger: TTCCACAGATTGCATGGGCCAGGCAGGACCTCTGAG...TGGGGTTGCTGGCCCAGTTCCACACACCCAGAAGGACAACCTCGCTCTGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp CACAGGCAGAAGGGGGAGAGACACAGAGCAGAGCTGTTAATACCAGAGTGGCAGCGTGCACCCATGCCCTaGAAGGAGCAGGCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: HRQKGERHRAELLIPEWQRAPMP*KEQAVP
Trigger: AGGGACAGCCTGCTCCTTCCAGGGCATGGGTGCACG...CTGCCACTCTGGTATTAACAGCTCTGCTCTGTGTCTCTCCCCCTTCTGCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp TCTGCTCCCAAGCTTGTTCTGTCTGTCCCTCTTTATAGTGTGGGGAAGCAGGCAGGAGTTGGGCAGCCCTaGCTGGCTGCACAGGCGAGG +
Preference number: 2 (lower is better)
Translates to: SAPKLVLSVPLYSVGKQAGVGQP*LAAQAR
Trigger: CCTCGCCTGTGCAGCCAGCCAGGGCTGCCCAACTCC...TGCCTGCTTCCCCACACTATAAAGAGGGACAGACAGAACAAGCTTGGGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR GCA 90 bp TCACAGAGCCCTAGACAGGAAAGGCGGCAGCAGTGGGCAGCGCAGGCCCCTGAGATACCAGAGTGGCAGTaGAATGCACACCCCATTTTT +
Preference number: 2 (lower is better)
Translates to: SQSPRQERRQQWAAQAPEIPEWQ*NAHPIF
Trigger: AAAAATGGGGTGTGCATTGCACTGCCACTCTGGTAT...CTCAGGGGCCTGCGCTGCCCACTGCTGCCGCCTTTCCTGTCTAGGGCTCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp GGGGTGAGAGGAGGACGCGAGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCATCAGAAGACACAGGTaGAAGGAGAGGAAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: GVRGGREDQGKQKSCEHFIRRHR*KERKPG
Trigger: GCCTGGCTTCCTCTCCTTCCACCTGTGTCTTCTGAT...GAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCTCGCGTCCTCCTCTCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR GCA 90 bp CCTGTGACTTTGTCACATGCCTTCTGCAGGCAGCCGCTGGTGTTCCTGCCCAATGGACATTTAGAGTGGTaGTTGGGGACCAGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: PVTLSHAFCRQPLVFLPNGHLEW*LGTSGP
Trigger: AGGGCCACTGGTCCCCAAGCACCACTCTAAATGTCC...ATTGGGCAGGAACACCAGCGGCTGCCTGCAGAAGGCATGTGACAAAGTCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp TCTGCTCCCAAGCTTGTTCTGTCTGTCCCTCTTTATAGTGTGGGGAAGCAGGCAGTGCTTGGGGACCAGTaGCCCTCCCTGGACAGGTGT +
Preference number: 2 (lower is better)
Translates to: SAPKLVLSVPLYSVGKQAVLGDQ*PSLDRC
Trigger: ACACCTGTCCAGGGAGGGCCACTGGTCCCCAAGCAC...TGCCTGCTTCCCCACACTATAAAGAGGGACAGACAGAACAAGCTTGGGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR TCA 90 bp CAGTGCACCAGCCTGCGGCTGAGTATGCCAGAGAGGCCAGGGAGTCAGTGGCAACCTGGTGCTAGGAATTaGACCCAAAGCCTTATAAAC +
Preference number: 2 (lower is better)
Translates to: QCTSLRLSMPERPGSQWQPGARN*TQSLIN
Trigger: GTTTATAAGGCTTTGGGTTCAATTCCTAGCACCAGG...TTGCCACTGACTCCCTGGCCTCTCTGGCATACTCAGCCGCAGGCTGGTGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR TCA 90 bp GAGAGACACAGAGCAGAGCTGTTAATACCAGAGTGGCAGTGCAATGCACACCCCAAAGACCCTGCCCTCTaGGAGGCAGGCTGTGGCTTA +
Preference number: 2 (lower is better)
Translates to: ERHRAELLIPEWQCNAHPKDPAL*EAGCGL
Trigger: TAAGCCACAGCCTGCCTCTCAGAGGGCAGGGTCTTT...GGGGTGTGCATTGCACTGCCACTCTGGTATTAACAGCTCTGCTCTGTGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp GAGAGACACAGAGCAGAGCTGTTAATACCAGAGTGGCAGTGCAATGCACACCCCGCTCTGTGGGCTGGGTaGTACAACTTCTCCCCTCTG +
Preference number: 2 (lower is better)
Translates to: ERHRAELLIPEWQCNAHPALWAG*YNFSPL
Trigger: CAGAGGGGAGAAGTTGTACCACCCAGCCCACAGAGC...GGGGTGTGCATTGCACTGCCACTCTGGTATTAACAGCTCTGCTCTGTGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR GCA 90 bp TCACAGAGCCCTAGACAGGAAAGGCGGCAGCAGTGGGCAGCGCAGGCCCCTGAGTCAGAGTTGAACACTTaGTCTTGTTGTCCAAGAAAT +
Preference number: 2 (lower is better)
Translates to: SQSPRQERRQQWAAQAPESELNT*SCCPRN
Trigger: ATTTCTTGGACAACAAGAGCAAGTGTTCAACTCTGA...CTCAGGGGCCTGCGCTGCCCACTGCTGCCGCCTTTCCTGTCTAGGGCTCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp CCACACCACAATCCAGATCCTAAGAGTACAAAAATGTGTGTCCGTGGCACTTGCATGAGCGCTGAGCGCTaGCTGGAGTGTCACCGCTGG +
Preference number: 2 (lower is better)
Translates to: PHHNPDPKSTKMCVRGTCMSAER*LECHRW
Trigger: CCAGCGGTGACACTCCAGCCAGCGCTCAGCGCTCAT...GCAAGTGCCACGGACACACATTTTTGTACTCTTAGGATCTGGATTGTGGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp CCCCTCCAACACATGGGCTTTACCACTGAAACAGGGCTGTGTGAAGCCAGGTGGGTCTCTGAGCATGAGTaGCTCAAACACACTCACTCC +
Preference number: 2 (lower is better)
Translates to: PLQHMGFTTETGLCEARWVSEHE*LKHTHS
Trigger: GGAGTGAGTGTGTTTGAGCCACTCATGCTCAGAGAC...CCACCTGGCTTCACACAGCCCTGTTTCAGTGGTAAAGCCCATGTGTTGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp CACAGGCAGAAGGGGGAGAGACACAGAGCAGAGCTGTTAATACCAGAGTGGCAGATCTCTGAGCAGATCTaGCTGTTTCAGGTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: HRQKGERHRAELLIPEWQISEQI*LFQVSE
Trigger: CTCAGAGACCTGAAACAGCCAGATCTGCTCAGAGAT...CTGCCACTCTGGTATTAACAGCTCTGCTCTGTGTCTCTCCCCCTTCTGCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp GAGAGACACAGAGCAGAGCTGTTAATACCAGAGTGGCAGTGCAATGCACACCCCTCTGAGGTGCCGAACTaGTCTCCTGTGACTTTGTCA +
Preference number: 2 (lower is better)
Translates to: ERHRAELLIPEWQCNAHPSEVPN*SPVTLS
Trigger: TGACAAAGTCACAGGAGACCAGTTCGGCACCTCAGA...GGGGTGTGCATTGCACTGCCACTCTGGTATTAACAGCTCTGCTCTGTGTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR TCA 90 bp CACAGAGCAGAGCTGTTAATACCAGAGTGGCAGTGCAATGCACACCCCATTTTTCTTGGACTACGTAGTTaGGGCTCAGAGGTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: HRAELLIPEWQCNAHPIFLGLRS*GSEVLP
Trigger: AGGCAGGACCTCTGAGCCTCAACTACGTAGTCCAAG...AAAAATGGGGTGTGCATTGCACTGCCACTCTGGTATTAACAGCTCTGCTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR GCA 90 bp CCTGTGACTTTGTCACATGCCTTCTGCAGGCAGCCGCTGGTGTTCCTGCCCAATCAATCTGTGGAAGGATaGTTACCTAAGCGTTCGTTT +
Preference number: 2 (lower is better)
Translates to: PVTLSHAFCRQPLVFLPNQSVEG*LPKRSF
Trigger: AAACGAACGCTTAGGTAAGCATCCTTCCACAGATTG...ATTGGGCAGGAACACCAGCGGCTGCCTGCAGAAGGCATGTGACAAAGTCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR GCA 90 bp CACAGAGCAGAGCTGTTAATACCAGAGTGGCAGTGCAATGCACACCCCATTTTTGTCCTGCCTGGCCCATaGAATCTGTGGAAGGATGCT +
Preference number: 2 (lower is better)
Translates to: HRAELLIPEWQCNAHPIFVLPGP*NLWKDA
Trigger: AGCATCCTTCCACAGATTGCATGGGCCAGGCAGGAC...AAAAATGGGGTGTGCATTGCACTGCCACTCTGGTATTAACAGCTCTGCTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR GCA 90 bp AGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCAGGAGTTGGGCAGCCCTGGTCTGCAGTGCTTACGTaGAGAAAACAAAGCACTAAT +
Preference number: 2 (lower is better)
Translates to: RTKGSRNPASTSGVGQPWSAVLT*RKQSTN
Trigger: ATTAGTGCTTTGTTTTCTGCACGTAAGCACTGCAGA...CCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR GCA 90 bp CTCCTTTGGGGGAATCAAATGAGCCTTCCAAGGAGATTGCCTAAGACCATCTGTGACTTGGGAGGATACTaGTGTAGCACACCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: LLWGNQMSLPRRLPKTICDLGGY*CSTPPS
Trigger: GCTGGGAGGTGTGCTACAGCAGTATCCTCCCAAGTC...ACAGATGGTCTTAGGCAATCTCCTTGGAAGGCTCATTTGATTCCCCCAAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp ACCCAGACAGCTCTGTGGGCTGGGTGGTACAACTTCTCCCCTCTGGCTCTCCTATTTCATTCATTTCTGTaGTTCTTGTCCCCAAAGGCT +
Preference number: 2 (lower is better)
Translates to: TQTALWAGWYNFSPLALLFHSFL*FLSPKA
Trigger: AGCCTTTGGGGACAAGAACCACAGAAATGAATGAAA...TAGGAGAGCCAGAGGGGAGAAGTTGTACCACCCAGCCCACAGAGCTGTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp TCTGCTCCCAAGCTTGTTCTGTCTGTCCCTCTTTATAGTGTGGGGAAGCAGGCAGGCCCATGCAATCTGTaGAAGGATGCTTACCTAAGC +
Preference number: 2 (lower is better)
Translates to: SAPKLVLSVPLYSVGKQAGPCNL*KDAYLS
Trigger: GCTTAGGTAAGCATCCTTCCACAGATTGCATGGGCC...TGCCTGCTTCCCCACACTATAAAGAGGGACAGACAGAACAAGCTTGGGAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp CACAGAGCAGAGCTGTTAATACCAGAGTGGCAGTGCAATGCACACCCCATTTTTCTTGGGCTGGGGGTGTaGAGACAGACACACTGTCTT +
Preference number: 2 (lower is better)
Translates to: HRAELLIPEWQCNAHPIFLGLGV*RQTHCL
Trigger: AAGACAGTGTGTCTGTCTCCACACCCCCAGCCCAAG...AAAAATGGGGTGTGCATTGCACTGCCACTCTGGTATTAACAGCTCTGCTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp CTCCTTTGGGGGAATCAAATGAGCCTTCCAAGGAGATTGCCTAAGACCATCTGTCTTAGGACATGGACTTaGGCTGGGGGTGTGGAGACA +
Preference number: 2 (lower is better)
Translates to: LLWGNQMSLPRRLPKTICLRTWT*AGGVET
Trigger: TGTCTCCACACCCCCAGCCCAAGTCCATGTCCTAAG...ACAGATGGTCTTAGGCAATCTCCTTGGAAGGCTCATTTGATTCCCCCAAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp TCTGCTCCCAAGCTTGTTCTGTCTGTCCCTCTTTATAGTGTGGGGAAGCAGGCATTCTCTGTATGGCCCTaGCTGTCCTGGAACTCACTT +
Preference number: 2 (lower is better)
Translates to: SAPKLVLSVPLYSVGKQAFSVWP*LSWNSL
Trigger: AAGTGAGTTCCAGGACAGCCAGGGCCATACAGAGAA...TGCCTGCTTCCCCACACTATAAAGAGGGACAGACAGAACAAGCTTGGGAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR GCA 90 bp GCTAGAGAGTGGGGACACTTAGGTATTTACTCTGAAGTGGTTTTTGAAGGAGAAGTACTGGGTCCTCCCTaGTGGCCTCTAGCACCACTG +
Preference number: 2 (lower is better)
Translates to: AREWGHLGIYSEVVFEGEVLGPP*WPLAPL
Trigger: CAGTGGTGCTAGAGGCCAGCAGGGAGGACCCAGTAC...TTCTCCTTCAAAAACCACTTCAGAGTAAATACCTAAGTGTCCCCACTCTCTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp TCTGCTCCCAAGCTTGTTCTGTCTGTCCCTCTTTATAGTGTGGGGAAGCAGGCAAAAAATGTGTGTCCGTaGCACTTGCTCAGCATGAGC +
Preference number: 2 (lower is better)
Translates to: SAPKLVLSVPLYSVGKQAKNVCP*HLLSMS
Trigger: GCTCATGCTGAGCAAGTGCCACGGACACACATTTTT...TGCCTGCTTCCCCACACTATAAAGAGGGACAGACAGAACAAGCTTGGGAGCAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 90 bp TTTTTAAGCACAAAACAAACACACCTCTACAGGACAGACAAGGCCTaGGAGGAACTGGGAGACTCCTTGGCCTGTGAACACATTCTAGGT +
Preference number: 2 (lower is better)
Translates to: FLSTKQTHLYRTDKA*EELGDSLACEHILG
Trigger: ACCTAGAATGTGTTCACAGGCCAAGGAGTCTCCCAGTTCCTCCAAGGCCTTGTCTGTCCTGTAGAGGTGTGTTTGTTTTGTGCTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR GCA 90 bp GCTAGAGAGTGGGGACACTTAGGTATTTACTCTGAAGTGGTTTTTGAAGGAGAATGTGACTTTGTCACATaGCTTCTGCAGGCAGCCGCT +
Preference number: 2 (lower is better)
Translates to: AREWGHLGIYSEVVFEGECDFVT*LLQAAA
Trigger: AGCGGCTGCCTGCAGAAGGCATGTGACAAAGTCACA...TTCTCCTTCAAAAACCACTTCAGAGTAAATACCTAAGTGTCCCCACTCTCTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp CTCCTTTGGGGGAATCAAATGAGCCTTCCAAGGAGATTGCCTAAGACCATCTGTAGCACTCTCAAAGTATaGATACCTCACACAGGCAGA +
Preference number: 2 (lower is better)
Translates to: LLWGNQMSLPRRLPKTICSTLKV*IPHTGR
Trigger: TCTGCCTGTGTGAGGTATCCATACTTTGAGAGTGCT...ACAGATGGTCTTAGGCAATCTCCTTGGAAGGCTCATTTGATTCCCCCAAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 90 bp TGCGGAGATCACCATGTGGTCAGAGCAGCAATACACAGAGTGAGTTaGCATAGTTTGCACTCTCTTGATAAAATGCTCCCTGGTTTAGAA +
Preference number: 2 (lower is better)
Translates to: CGDHHVVRAAIHRVS*HSLHSLDKMLPGLE
Trigger: TTCTAAACCAGGGAGCATTTTATCAAGAGAGTGCAAACTATGCAAACTCACTCTGTGTATTGCTGCTCTGACCACATGGTGATCTCCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CCA 90 bp CTCCTTTGGGGGAATCAAATGAGCCTTCCAAGGAGATTGCCTAAGACCATCTGTCCTAGGGTGTCTATTTaGCTATCTGAAAGAATTTCA +
Preference number: 2 (lower is better)
Translates to: LLWGNQMSLPRRLPKTICPRVSI*LSERIS
Trigger: TGAAATTCTTTCAGATAGCCAAATAGACACCCTAGG...ACAGATGGTCTTAGGCAATCTCCTTGGAAGGCTCATTTGATTCCCCCAAAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 90 bp GGGTCACGACTCCTTTGGGGGAATCAAATGAGCCTTCCAAGGAGATaGCCTAAGACCATCTGTATATCAGATATTTACATTACAACTCAT +
Preference number: 2 (lower is better)
Translates to: GSRLLWGNQMSLPRR*PKTICISDIYITTH
Trigger: ATGAGTTGTAATGTAAATATCTGATATACAGATGGTCTTAGGCAATCTCCTTGGAAGGCTCATTTGATTCCCCCAAAGGAGTCGTGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 90 bp CACCATGTGGTCAGAGCAGCAATACACAGAGTGAGTTTGCATAGTTaGCACTCTCTTGATAAAATGCTCCCTGGTTTAGAAAATACATTC +
Preference number: 2 (lower is better)
Translates to: HHVVRAAIHRVSLHS*HSLDKMLPGLENTF
Trigger: GAATGTATTTTCTAAACCAGGGAGCATTTTATCAAGAGAGTGCAAACTATGCAAACTCACTCTGTGTATTGCTGCTCTGACCACATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp GCTGTAGCACACCTCCCAGCCCGTGCACCCATGCCCTaGAAGGAGCAGGCTGTCCCTCCACCCGCTCGGCTG +
Preference number: 3 (lower is better)
Translates to: AVAHLPARAPMP*KEQAVPPPARL
Trigger: CAGCCGAGCGGGTGGAGGGACAGCCTGCTCCTTCCAGGGCATGGGTGCACGGGCTGGGAGGTGTGCTACAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp CCTCCACCCGCTCGGCTGTGCACCCAGACAGCTCTGTaGGCTGGGTGGTACAACTTCTCCCCTCTGGCTCTC +
Preference number: 3 (lower is better)
Translates to: PPPARLCTQTAL*AGWYNFSPLAL
Trigger: GAGAGCCAGAGGGGAGAAGTTGTACCACCCAGCCCACAGAGCTGTCTGGGTGCACAGCCGAGCGGGTGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 72 bp GCGCTGAGCGCTGGCTGGAGTGTCACCGCTGGGAGATaGCATCGTTCTGTCAGGAACGCGCTTGCTCACTGC +
Preference number: 3 (lower is better)
Translates to: ALSAGWSVTAGR*HRSVRNALAHC
Trigger: GCAGTGAGCAAGCGCGTTCCTGACAGAACGATGGCATCTCCCAGCGGTGACACTCCAGCCAGCGCTCAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 72 bp TTGGGAGGATACTGCTGTAGCACACCTCCCAGCCCGTaGACCCATGCCCTGGAAGGAGCAGGCTGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: LGGYCCSTPPSP*THALEGAGCPS
Trigger: GGAGGGACAGCCTGCTCCTTCCAGGGCATGGGTGCACGGGCTGGGAGGTGTGCTACAGCAGTATCCTCCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 72 bp GGGCTGTGTGAAGCCAGGTGGGCTAAGACTCAAGGCTaGAGAGGACAGCTCGTGAGCTGGGGCGGCTGGACT +
Preference number: 3 (lower is better)
Translates to: GLCEARWAKTQG*RGQLVSWGGWT
Trigger: AGTCCAGCCGCCCCAGCTCACGAGCTGTCCTCTGCAGCCTTGAGTCTTAGCCCACCTGGCTTCACACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp ATCCTGCGAGCACTTCAGGAGTTGGGCAGCCCTGGCTaGCTGCACAGGCGAGGGCTAGAGAGTGGGGACACT +
Preference number: 3 (lower is better)
Translates to: ILRALQELGSPG*LHRRGLESGDT
Trigger: AGTGTCCCCACTCTCTAGCCCTCGCCTGTGCAGCCAGCCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp TCCTCACAGAGCCCTAGACAGGAAAGGCGGCAGCAGTaGGCAGCGCAGGCCCCTGAGGAACACACGGTGAGT +
Preference number: 3 (lower is better)
Translates to: SSQSPRQERRQQ*AAQAPEEHTVS
Trigger: ACTCACCGTGTGTTCCTCAGGGGCCTGCGCTGCCCACTGCTGCCGCCTTTCCTGTCTAGGGCTCTGTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp GGACCTGCCAGGGCAGCACAAGCAGCGGCTTCTCACTaGTGGCTTAGGACATGGACTTGGGCTGGGGGTGTG +
Preference number: 3 (lower is better)
Translates to: GPARAAQAAASH*WLRTWTWAGGV
Trigger: CACACCCCCAGCCCAAGTCCATGTCCTAAGCCATCAGTGAGAAGCCGCTGCTTGTGCTGCCCTGGCAGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 72 bp AGAGGAGGACGCGAGGACCAAGGGAAGCAGAAATCCTaGGAGCACTTCAGGAGTTGGGCAGCCCTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: RGGREDQGKQKS*EHFRSWAALAG
Trigger: GCCAGCCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCTCGCGTCCTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp AGCATGAGCGCTGAGCGCTGGCTGGAGTGTCACCGCTaGGAGATGCCATCGTTCTGTCAGGAACGCGCTTGC +
Preference number: 3 (lower is better)
Translates to: SMSAERWLECHR*EMPSFCQERAC
Trigger: GCAAGCGCGTTCCTGACAGAACGATGGCATCTCCCAGCGGTGACACTCCAGCCAGCGCTCAGCGCTCATGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp CAAGGCTGCAGAGGACAGCTCGTGAGCTGGGGCGGCTaGACTCCAATCAGACTCCTCTACCCAAGGACACCG +
Preference number: 3 (lower is better)
Translates to: QGCRGQLVSWGG*TPIRLLYPRTP
Trigger: CGGTGTCCTTGGGTAGAGGAGTCTGATTGGAGTCCAGCCGCCCCAGCTCACGAGCTGTCCTCTGCAGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp AGAAATCCTGCGAGCACTTCAGGAGTTGGGCAGCCCTaGCTGGCTGCACAGGCGAGGGCTAGAGAGTGGGGA +
Preference number: 3 (lower is better)
Translates to: RNPASTSGVGQP*LAAQARAREWG
Trigger: TCCCCACTCTCTAGCCCTCGCCTGTGCAGCCAGCCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGATTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp GGTGGGCTAAGACTCAAGGCTGCAGAGGACAGCTCGTaGGCTGGGGCGGCTGGACTCCAATCAGACTCCTCT +
Preference number: 3 (lower is better)
Translates to: GGLRLKAAEDSS*AGAAGLQSDSS
Trigger: AGAGGAGTCTGATTGGAGTCCAGCCGCCCCAGCTCACGAGCTGTCCTCTGCAGCCTTGAGTCTTAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp GCTCGGCTGTGCACCCAGACAGCTCTGTGGGCTGGGTaGTACAACTTCTCCCCTCTGGCTCTCCTAAAACCC +
Preference number: 3 (lower is better)
Translates to: ARLCTQTALWAG*YNFSPLALLKP
Trigger: GGGTTTTAGGAGAGCCAGAGGGGAGAAGTTGTACCACCCAGCCCACAGAGCTGTCTGGGTGCACAGCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp ACCCGCTCGGCTGTGCACCCAGACAGCTCTGTGGGCTaGGTGGTACAACTTCTCCCCTCTGGCTCTCCTAAA +
Preference number: 3 (lower is better)
Translates to: TRSAVHPDSSVG*VVQLLPSGSPK
Trigger: TTTAGGAGAGCCAGAGGGGAGAAGTTGTACCACCCAGCCCACAGAGCTGTCTGGGTGCACAGCCGAGCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp AGCCCCAGGTTAGGCTTCCCATTCCCCCGCCATGCCTaGCTTCCCACCTACAGCAGTTCCAGGGCAAGACTT +
Preference number: 3 (lower is better)
Translates to: SPRLGFPFPRHA*LPTYSSSRARL
Trigger: AAGTCTTGCCCTGGAACTGCTGTAGGTGGGAAGCCAGGCATGGCGGGGGAATGGGAAGCCTAACCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp GAGGACCAGCAGCTTGGCAGAGCGAGGTTGTCCTTCTaGGTGTGTGGAACTGGGCCAGCAACCCCATCAGAC +
Preference number: 3 (lower is better)
Translates to: EDQQLGRARLSF*VCGTGPATPSD
Trigger: GTCTGATGGGGTTGCTGGCCCAGTTCCACACACCCAGAAGGACAACCTCGCTCTGCCAAGCTGCTGGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CAA 90 bp CAGTGCACCAGCCTGCGGCTGAGTATGCCAGAGAGGCCAGGGAGTCAGTGGCAAGTTCCAGGGCAAGACTaGGGAGGATACTGCTGTAGC +
Preference number: 3 (lower is better)
Translates to: QCTSLRLSMPERPGSQWQVPGQD*GGYCCS
Trigger: GCTACAGCAGTATCCTCCCAAGTCTTGCCCTGGAAC...TTGCCACTGACTCCCTGGCCTCTCTGGCATACTCAGCCGCAGGCTGGTGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp GGAATGGAGTCAGGAGAGCCAGCTGGAGCGCACTTCTaGAGCTCCAAGGCCTTTCTCCCTTCAGCCAGCTGT +
Preference number: 3 (lower is better)
Translates to: GMESGEPAGAHF*SSKAFLPSASC
Trigger: ACAGCTGGCTGAAGGGAGAAAGGCCTTGGAGCTCCAGAAGTGCGCTCCAGCTGGCTCTCCTGACTCCATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp CTGGCTTCCCACCTACAGCAGTTCCAGGGCAAGACTTaGGAGGATACTGCTGTAGCACACCTCCCAGCCCGT +
Preference number: 3 (lower is better)
Translates to: LASHLQQFQGKT*EDTAVAHLPAR
Trigger: ACGGGCTGGGAGGTGTGCTACAGCAGTATCCTCCCAAGTCTTGCCCTGGAACTGCTGTAGGTGGGAAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CAA 90 bp TCACAGAGCCCTAGACAGGAAAGGCGGCAGCAGTGGGCAGCGCAGGCCCCTGAGGCGCTTGCTCACTGCTaGGCTATGAATAAGCTAGTT +
Preference number: 3 (lower is better)
Translates to: SQSPRQERRQQWAAQAPEALAHC*AMNKLV
Trigger: AACTAGCTTATTCATAGCCAAGCAGTGAGCAAGCGC...CTCAGGGGCCTGCGCTGCCCACTGCTGCCGCCTTTCCTGTCTAGGGCTCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR-3UTR CAA 90 bp CTTGGCAGAGCGAGGTTGTCCTTCTGGGTGTGTGGAACTGGGCCAGCAACCCCATGGTCTCCTGTGACTTaGTCACATGCCTTCTGCAGG +
Preference number: 3 (lower is better)
Translates to: LGRARLSFWVCGTGPATPWSPVT*SHAFCR
Trigger: CCTGCAGAAGGCATGTGACAAAGTCACAGGAGACCA...TGGGGTTGCTGGCCCAGTTCCACACACCCAGAAGGACAACCTCGCTCTGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp AGTACAAAAATGTGTGTCCGTGGCACTTGCTCAGCATaGGCGCTGAGCGCTGGCTGGAGTGTCACCGCTGGG +
Preference number: 3 (lower is better)
Translates to: STKMCVRGTCSA*ALSAGWSVTAG
Trigger: CCCAGCGGTGACACTCCAGCCAGCGCTCAGCGCTCATGCTGAGCAAGTGCCACGGACACACATTTTTGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp GCGACTCACCTGCAAGTCCTGGGCACTAAGCGGCTCTaGGGTGCCGAACTGGTCTCCTGTGACTTTGTCACA +
Preference number: 3 (lower is better)
Translates to: ATHLQVLGTKRL*GAELVSCDFVT
Trigger: TGTGACAAAGTCACAGGAGACCAGTTCGGCACCTCAGAGCCGCTTAGTGCCCAGGACTTGCAGGTGAGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp CAGGATAAAGGGCTAGAAGCTTTCCTTTCCACAGCCTaGGCACCAGGCCAGTCTTCCCAGCCCCAGGTTAGG +
Preference number: 3 (lower is better)
Translates to: QDKGLEAFLSTA*APGQSSQPQVR
Trigger: CCTAACCTGGGGCTGGGAAGACTGGCCTGGTGCCCAGGCTGTGGAAAGGAAAGCTTCTAGCCCTTTATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp CTCCCAAGCTTGTTCTGTCTGTCCCTCTTTATAGTGTaGGGAAGCAGGCAGGTGGTCCCTGGCCAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: LPSLFCLSLFIV*GSRQVVPGQAE
Trigger: CTCTGCCTGGCCAGGGACCACCTGCCTGCTTCCCCACACTATAAAGAGGGACAGACAGAACAAGCTTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp GTGAAACGAGGCCCCTTCCAAAAAGACCCTGCCCTCTaGGAGGCAGGCTGTGGCTTAGATGTCACCAGAGGA +
Preference number: 3 (lower is better)
Translates to: VKRGPFQKDPAL*EAGCGLDVTRG
Trigger: TCCTCTGGTGACATCTAAGCCACAGCCTGCCTCTCAGAGGGCAGGGTCTTTTTGGAAGGGGCCTCGTTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 72 bp TGTCACATGCCTTCTGCAGGCAGCCGCTGGTGTTCCTaGCCAATCTCTGAGCAGATCTGGCTGTTTCAGGTC +
Preference number: 3 (lower is better)
Translates to: CHMPSAGSRWCS*PISEQIWLFQV
Trigger: GACCTGAAACAGCCAGATCTGCTCAGAGATTGGGCAGGAACACCAGCGGCTGCCTGCAGAAGGCATGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp CATTTAGAGTGGTGCTTGGGGACCAGTGGCCCTCCCTaGACAGGTGTCATGCCACCTAGGGTGTCTATTTGG +
Preference number: 3 (lower is better)
Translates to: HLEWCLGTSGPP*TGVMPPRVSIW
Trigger: CCAAATAGACACCCTAGGTGGCATGACACCTGTCCAGGGAGGGCCACTGGTCCCCAAGCACCACTCTAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp AAGTCCTGGGCACTAAGCGGCTCTGAGGTGCCGAACTaGTCTCCTGTGACTTTGTCACATGCCTTCTGCAGG +
Preference number: 3 (lower is better)
Translates to: KSWALSGSEVPN*SPVTLSHAFCR
Trigger: CCTGCAGAAGGCATGTGACAAAGTCACAGGAGACCAGTTCGGCACCTCAGAGCCGCTTAGTGCCCAGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp GGCTTTACCACTGAAACAGGGCTGTGTGAAGCCAGGTaGGCTAAGACTCAAGGCTGCAGAGGACAGCTCGTG +
Preference number: 3 (lower is better)
Translates to: GFTTETGLCEAR*AKTQGCRGQLV
Trigger: CACGAGCTGTCCTCTGCAGCCTTGAGTCTTAGCCCACCTGGCTTCACACAGCCCTGTTTCAGTGGTAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp ACAGGCTTTCCAGCCCCATCAGCAGGACACAGCACTTaGATGCTAAGAAGACTGGTCCTCCAGTTCCCTCCC +
Preference number: 3 (lower is better)
Translates to: TGFPAPSAGHST*MLRRLVLQFPP
Trigger: GGGAGGGAACTGGAGGACCAGTCTTCTTAGCATCCAAGTGCTGTGTCCTGCTGATGGGGCTGGAAAGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp CAAGGCCTTGGAGGAACTGGGAGACTCCTTGGCCTGTaGACACATTCTAGGTGGTACAGGTATGAGGGGGAC +
Preference number: 3 (lower is better)
Translates to: QGLGGTGRLLGL*THSRWYRYEGD
Trigger: GTCCCCCTCATACCTGTACCACCTAGAATGTGTTCACAGGCCAAGGAGTCTCCCAGTTCCTCCAAGGCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 72 bp GCTTGGGGACCAGTGGCCCTCCCTGGACAGGTGTCATaGCACCTAGGGTGTCTATTTGGCTATCTGAAAGAA +
Preference number: 3 (lower is better)
Translates to: AWGPVALPGQVS*HLGCLFGYLKE
Trigger: TTCTTTCAGATAGCCAAATAGACACCCTAGGTGGCATGACACCTGTCCAGGGAGGGCCACTGGTCCCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 72 bp AGACTGCACTCCAAGAGCCAGACAGGCATTGCGGTGTaGGGAGATCACCATGTGGTCAGAGCAGCAATACAC +
Preference number: 3 (lower is better)
Translates to: RLHSKSQTGIAV*GDHHVVRAAIH
Trigger: GTGTATTGCTGCTCTGACCACATGGTGATCTCCGCACACCGCAATGCCTGTCTGGCTCTTGGAGTGCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp TGGCAGAGCGAGGTTGTCCTTCTGGGTGTGTGGAACTaGGCCAGCAACCCCATCAGACTAATGCTTCCTCAA +
Preference number: 3 (lower is better)
Translates to: WQSEVVLLGVWN*ASNPIRLMLPQ
Trigger: TTGAGGAAGCATTAGTCTGATGGGGTTGCTGGCCCAGTTCCACACACCCAGAAGGACAACCTCGCTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp CACTCACTCCCTTCATGCATACTTGGACTACGTAGTTaGGGCTCAGAGGTCCTGCCTGGCCCATGCAATCTG +
Preference number: 3 (lower is better)
Translates to: HSLPSCILGLRS*GSEVLPGPCNL
Trigger: CAGATTGCATGGGCCAGGCAGGACCTCTGAGCCTCAACTACGTAGTCCAAGTATGCATGAAGGGAGTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp CAGTTCCCTCCCCGTCTACTGCACCTCAACTCCAAATaGGCATCCTGTCTCAGGAATGTGTCTGCCTCACTC +
Preference number: 3 (lower is better)
Translates to: QFPPRLLHLNSK*ASCLRNVSASL
Trigger: GAGTGAGGCAGACACATTCCTGAGACAGGATGCTCATTTGGAGTTGAGGTGCAGTAGACGGGGAGGGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp AGCCGCTGGTGTTCCTGCCCAATCTCTGAGCAGATCTaGCTGTTTCAGGTCTCTGAGCATGAGTGGCTCAAA +
Preference number: 3 (lower is better)
Translates to: SRWCSCPISEQI*LFQVSEHEWLK
Trigger: TTTGAGCCACTCATGCTCAGAGACCTGAAACAGCCAGATCTGCTCAGAGATTGGGCAGGAACACCAGCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp AGCCCACAGCTTCCAGTCCACAGCACTCTCAAAGTATaGATACCTCACACAGGCAGAAGGGGGAGAGACACA +
Preference number: 3 (lower is better)
Translates to: SPQLPVHSTLKV*IPHTGRRGRDT
Trigger: TGTGTCTCTCCCCCTTCTGCCTGTGTGAGGTATCCATACTTTGAGAGTGCTGTGGACTGGAAGCTGTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp CAGCCCTGGCTGGCTGCACAGGCGAGGGCTAGAGAGTaGGGACACTTAGGTATTTACTCTGAAGTGGTTTTT +
Preference number: 3 (lower is better)
Translates to: QPWLAAQARARE*GHLGIYSEVVF
Trigger: AAAAACCACTTCAGAGTAAATACCTAAGTGTCCCCACTCTCTAGCCCTCGCCTGTGCAGCCAGCCAGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp CCTCTTTATAGTGTGGGGAAGCAGGCAGGTGGTCCCTaGCCAGGCAGAGGGTCACCTAAATGTATGATGCTT +
Preference number: 3 (lower is better)
Translates to: PLYSVGKQAGGP*PGRGSPKCMML
Trigger: AAGCATCATACATTTAGGTGACCCTCTGCCTGGCCAGGGACCACCTGCCTGCTTCCCCACACTATAAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp TGTGCCTTCCCCACTGGCCAGGATGAAGTCTCCCTGTaGTCAAAATCATACCAGGTCCTGACATGCCAGTCA +
Preference number: 3 (lower is better)
Translates to: CAFPTGQDEVSL*SKSYQVLTCQS
Trigger: TGACTGGCATGTCAGGACCTGGTATGATTTTGACCACAGGGAGACTTCATCCTGGCCAGTGGGGAAGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp ACTGATGGCTTAGGACATGGACTTGGGCTGGGGGTGTaGAGACAGACACACTGTCTTCAGGACAGAGATCTT +
Preference number: 3 (lower is better)
Translates to: TDGLGHGLGLGV*RQTHCLQDRDL
Trigger: AAGATCTCTGTCCTGAAGACAGTGTGTCTGTCTCCACACCCCCAGCCCAAGTCCATGTCCTAAGCCATCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 72 bp AGAGGTCCTGCCTGGCCCATGCAATCTGTGGAAGGATaGTTACCTAAGCGTTCGTTTAGACACTACCCTTTC +
Preference number: 3 (lower is better)
Translates to: RGPAWPMQSVEG*LPKRSFRHYPF
Trigger: GAAAGGGTAGTGTCTAAACGAACGCTTAGGTAAGCATCCTTCCACAGATTGCATGGGCCAGGCAGGACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 72 bp CAACTCCAAATGAGCATCCTGTCTCAGGAATGTGTCTaGCTCACTCTGCTCTGTATGCACACACTAGGAGCC +
Preference number: 3 (lower is better)
Translates to: QLQMSILSQECV*LTLLCMHTLGA
Trigger: GGCTCCTAGTGTGTGCATACAGAGCAGAGTGAGGCAGACACATTCCTGAGACAGGATGCTCATTTGGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp TGGTCAAAATCATACCAGGTCCTGACATGCCAGTCATaGCCACATCTGCTCCCAAGCTTGTTCTGTCTGTCC +
Preference number: 3 (lower is better)
Translates to: WSKSYQVLTCQS*PHLLPSLFCLS
Trigger: GGACAGACAGAACAAGCTTGGGAGCAGATGTGGTCATGACTGGCATGTCAGGACCTGGTATGATTTTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp ATGAAGTCTCCCTGTGGTCAAAATCATACCAGGTCCTaGCATGCCAGTCATGACCACATCTGCTCCCAAGCT +
Preference number: 3 (lower is better)
Translates to: MKSPCGQNHTRS*HASHDHICSQA
Trigger: AGCTTGGGAGCAGATGTGGTCATGACTGGCATGTCAGGACCTGGTATGATTTTGACCACAGGGAGACTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp CAACCTGTGGGTCACGACTCCTTTGGGGGAATCAAATaGGCCTTCCAAGGAGATTGCCTAAGACCATCTGTA +
Preference number: 3 (lower is better)
Translates to: QPVGHDSFGGIK*AFQGDCLRPSV
Trigger: TACAGATGGTCTTAGGCAATCTCCTTGGAAGGCTCATTTGATTCCCCCAAAGGAGTCGTGACCCACAGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp GAGCAGATCTGGCTGTTTCAGGTCTCTGAGCATGAGTaGCTCAAACACACTCACTCCCTTCATGCATACTTG +
Preference number: 3 (lower is better)
Translates to: EQIWLFQVSEHE*LKHTHSLHAYL
Trigger: CAAGTATGCATGAAGGGAGTGAGTGTGTTTGAGCCACTCATGCTCAGAGACCTGAAACAGCCAGATCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp TTACAGCAGTTCTCAACCTGTGGGTCACGACTCCTTTaGGGGAATCAAATGAGCCTTCCAAGGAGATTGCCT +
Preference number: 3 (lower is better)
Translates to: LQQFSTCGSRLL*GNQMSLPRRLP
Trigger: AGGCAATCTCCTTGGAAGGCTCATTTGATTCCCCCAAAGGAGTCGTGACCCACAGGTTGAGAACTGCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp TGGTCAGGGGCCACTGAAAATGAACACAGAGATTGCTaGTGGGCTTCCCGTTCTGCAAAGACTTGCTTTAGA +
Preference number: 3 (lower is better)
Translates to: WSGATENEHRDC*WASRSAKTCFR
Trigger: TCTAAAGCAAGTCTTTGCAGAACGGGAAGCCCATCAGCAATCTCTGTGTTCATTTTCAGTGGCCCCTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 72 bp AGCGTTCGTTTAGACACTACCCTTTCTGTCCTCAGCTaGTCCTTCAGGAAAGTTCTGTTTTCTCGGATTCGG +
Preference number: 3 (lower is better)
Translates to: SVRLDTTLSVLS*SFRKVLFSRIR
Trigger: CCGAATCCGAGAAAACAGAACTTTCCTGAAGGAGCAGCTGAGGACAGAAAGGGTAGTGTCTAAACGAACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 72 bp CTTGATAAAATGCTCCCTGGTTTAGAAAATACATTCTaGACGCAGCTGCAGGCAGCCAATGCTGCAGTGCAC +
Preference number: 3 (lower is better)
Translates to: LDKMLPGLENTF*TQLQAANAAVH
Trigger: GTGCACTGCAGCATTGGCTGCCTGCAGCTGCGTGCAGAATGTATTTTCTAAACCAGGGAGCATTTTATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp TTGTGGTCACCACAACATGAGGAACTGTATGAACACTaGATTTTGAGGAGGAAGCTAGGCAGTGCCTGGGTT +
Preference number: 3 (lower is better)
Translates to: LWSPQHEELYEH*ILRRKLGSAWV
Trigger: AACCCAGGCACTGCCTAGCTTCCTCCTCAAAATTCAGTGTTCATACAGTTCCTCATGTTGTGGTGACCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 72 bp AGATGCCATCGTTCTGTCAGGAACGCGCTTGCTCACTaGTTGGCTATGAATAAGCTAGTTTCATTGACAGCA +
Preference number: 3 (lower is better)
Translates to: RCHRSVRNALAH*LAMNKLVSLTA
Trigger: TGCTGTCAATGAAACTAGCTTATTCATAGCCAAGCAGTGAGCAAGCGCGTTCCTGACAGAACGATGGCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR GCA 72 bp GGAATCTTTATTGGGCGTATTTGCTTTGCAGTGAAGTaGCTCCATATAGTGGCCAGTCCTGAGCACATCCAA +
Preference number: 3 (lower is better)
Translates to: GIFIGRICFAVK*LHIVASPEHIQ
Trigger: TTGGATGTGCTCAGGACTGGCCACTATATGGAGGCACTTCACTGCAAAGCAAATACGCCCAATAAAGATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp CTTTGCAGTGAAGTGCCTCCATATAGTGGCCAGTCCTaGGCACATCCAAATCCCATGCTTGGAAATATTTCA +
Preference number: 3 (lower is better)
Translates to: LCSEVPPYSGQS*AHPNPMLGNIS
Trigger: TGAAATATTTCCAAGCATGGGATTTGGATGTGCTCAGGACTGGCCACTATATGGAGGCACTTCACTGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp TGGGTTTCCCTAGGACCACAGACACAAGCTTCCTCATaGAATCTTTATTGGGCGTATTTGCTTTGCAGTGAA +
Preference number: 3 (lower is better)
Translates to: WVSLGPQTQASS*NLYWAYLLCSE
Trigger: TTCACTGCAAAGCAAATACGCCCAATAAAGATTCCATGAGGAAGCTTGTGTCTGTGGTCCTAGGGAAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CCA 72 bp CCCTGGACAGGTGTCATGCCACCTAGGGTGTCTATTTaGCTATCTGAAAGAATTTCATTCATTTCTGTGGTT +
Preference number: 3 (lower is better)
Translates to: PWTGVMPPRVSI*LSERISFISVV
Trigger: AACCACAGAAATGAATGAAATTCTTTCAGATAGCCAAATAGACACCCTAGGTGGCATGACACCTGTCCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp GAGATCACCATGTGGTCAGAGCAGCAATACACAGAGTaGGTTTGCATAGTTTGCACTCTCTTGATAAAATGC +
Preference number: 3 (lower is better)
Translates to: EITMWSEQQYTE*VCIVCTLLIKC
Trigger: GCATTTTATCAAGAGAGTGCAAACTATGCAAACTCACTCTGTGTATTGCTGCTCTGACCACATGGTGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR TCA 72 bp GAGAGGCTGAGTCCTGTTAGAGCCAGAATTCAGAGTTaGACACTTGCTCTTGTTGTCCAAGAAATAATTATC +
Preference number: 3 (lower is better)
Translates to: ERLSPVRARIQS*TLALVVQEIII
Trigger: GATAATTATTTCTTGGACAACAAGAGCAAGTGTTCAACTCTGAATTCTGGCTCTAACAGGACTCAGCCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CCA 90 bp TTCAGCCAGCTGTGTACTGGGTCCTCCCTGCTGGCCTCTAGCACCACTGGTGTACGGCCCAAGACGGGGTaGACCAGCAGCTCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: FSQLCTGSSLLASSTTGVRPKTG*TSSSSN
Trigger: GTTGCTGGAGCTGCTGGTCCACCCCGTCTTGGGCCG...TACACCAGTGGTGCTAGAGGCCAGCAGGGAGGACCCAGTACACAGCTGGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 72 bp CCAAGGGAAGCAGAAATCCTGCGAGCACTTCAGGAGTaGGGCAGCCCTGGCTGGCTGCACAGGCGAGGGCTA +
Preference number: 4 (lower is better)
Translates to: PREAEILRALQE*GSPGWLHRRGL
Trigger: TAGCCCTCGCCTGTGCAGCCAGCCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGATTTCTGCTTCCCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR TCA 90 bp AGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCAGGAGTTGGGCAGCCCTGGTCTTTGAGCGCCAGGTaGTGGACGCGGCCCAAGACG +
Preference number: 4 (lower is better)
Translates to: RTKGSRNPASTSGVGQPWSLSAR*WTRPKT
Trigger: CGTCTTGGGCCGCGTCCATCACCTGGCGCTCAAAGA...CCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR TCA 90 bp CTTGGCAGAGCGAGGTTGTCCTTCTGGGTGTGTGGAACTGGGCCAGCAACCCCACTTTGGGGTTGGAGCTaGCAGCAGGCTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LGRARLSFWVCGTGPATPLWGWS*QQAPGS
Trigger: AGAGCCAGGAGCCTGCTGTCAGCTCCAACCCCAAAG...TGGGGTTGCTGGCCCAGTTCCACACACCCAGAAGGACAACCTCGCTCTGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 72 bp CCTGGCTTCCCACCTACAGCAGTTCCAGGGCAAGACTaGGGAGGATACTGCTGTAGCACACCTCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PGFPPTAVPGQD*GGYCCSTPPSP
Trigger: CGGGCTGGGAGGTGTGCTACAGCAGTATCCTCCCAAGTCTTGCCCTGGAACTGCTGTAGGTGGGAAGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CCA 90 bp GAGGTCCTGCCTGGCCCATGCAATCTGTGGAAGGATGCTTACCTAAGCGTTCGTCCTTCCCAGCTGCCCTaGGGCTCCACAGCACCGTTG +
Preference number: 4 (lower is better)
Translates to: EVLPGPCNLWKDAYLSVRPSQLP*GSTAPL
Trigger: CAACGGTGCTGTGGAGCCCCAGGGCAGCTGGGAAGG...ACGAACGCTTAGGTAAGCATCCTTCCACAGATTGCATGGGCCAGGCAGGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 72 bp AGCGGCTCTGAGGTGCCGAACTGGTCTCCTGTGACTTaGTCACATGCCTTCTGCAGGCAGCCGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: SGSEVPNWSPVT*SHAFCRQPLVF
Trigger: GAACACCAGCGGCTGCCTGCAGAAGGCATGTGACAAAGTCACAGGAGACCAGTTCGGCACCTCAGAGCCGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR TCA 90 bp TCACAGAGCCCTAGACAGGAAAGGCGGCAGCAGTGGGCAGCGCAGGCCCCTGAGGTCATTCTTGTGAATTaGGAAGGATCGCTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SQSPRQERRQQWAAQAPEVILVN*EGSLCD
Trigger: ATCACAGAGCGATCCTTCTCAATTCACAAGAATGAC...CTCAGGGGCCTGCGCTGCCCACTGCTGCCGCCTTTCCTGTCTAGGGCTCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CCA 90 bp CTTGGCAGAGCGAGGTTGTCCTTCTGGGTGTGTGGAACTGGGCCAGCAACCCCACAAAGAACACCAGCGTaGCTGTTTCATCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGRARLSFWVCGTGPATPQRTPA*LFHPAA
Trigger: AGCTGCTGGATGAAACAGCCACGCTGGTGTTCTTTG...TGGGGTTGCTGGCCCAGTTCCACACACCCAGAAGGACAACCTCGCTCTGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR TCA 90 bp CACAGGCAGAAGGGGGAGAGACACAGAGCAGAGCTGTTAATACCAGAGTGGCAGGCAGGCTCCTGGCTCTaGCTCAGGATTTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: HRQKGERHRAELLIPEWQAGSWL*LRIFSS
Trigger: GGATGAGAAAATCCTGAGTCAGAGCCAGGAGCCTGC...CTGCCACTCTGGTATTAACAGCTCTGCTCTGTGTCTCTCCCCCTTCTGCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR TCA 90 bp ACCCAGACAGCTCTGTGGGCTGGGTGGTACAACTTCTCCCCTCTGGCTCTCCTACTCTGTGATAGCCTTTaGGTCCACTGTACTTCGTCC +
Preference number: 4 (lower is better)
Translates to: TQTALWAGWYNFSPLALLLCDSL*VHCTSS
Trigger: GGACGAAGTACAGTGGACTCAAAGGCTATCACAGAG...TAGGAGAGCCAGAGGGGAGAAGTTGTACCACCCAGCCCACAGAGCTGTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR TCA 90 bp CTTGGCAGAGCGAGGTTGTCCTTCTGGGTGTGTGGAACTGGGCCAGCAACCCCACTTCACGTTGTTGCCTaGGCACTTGTGGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: LGRARLSFWVCGTGPATPLHVVA*ALVEVK
Trigger: CTTTACTTCCACAAGTGCTCAGGCAACAACGTGAAG...TGGGGTTGCTGGCCCAGTTCCACACACCCAGAAGGACAACCTCGCTCTGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR GCA 90 bp GGGCTGGGGGTGTGGAGACAGACACACTGTCTTCAGGACAGAGATCTTCTGCACGGCCATACTCAGTTGTaGCCTCCTCAGTGGACTCTA +
Preference number: 4 (lower is better)
Translates to: GLGVWRQTHCLQDRDLLHGHTQL*PPQWTL
Trigger: TAGAGTCCACTGAGGAGGGCACAACTGAGTATGGCC...GTGCAGAAGATCTCTGTCCTGAAGACAGTGTGTCTGTCTCCACACCCCCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR TCA 90 bp AGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCAGGAGTTGGGCAGCCCTGGCTCTTACGAAGGATGTaGATCCAAATGGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: RTKGSRNPASTSGVGQPWLLRRM*IQMVPD
Trigger: GTCTGGGACCATTTGGATTCACATCCTTCGTAAGAG...CCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR GCA 90 bp GGGGTGAGAGGAGGACGCGAGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCGAGGCTTCTTGTAAATaGCTGATTGACCACACCACT +
Preference number: 4 (lower is better)
Translates to: GVRGGREDQGKQKSCEHFEASCK*LIDHTT
Trigger: AGTGGTGTGGTCAATCAGGCATTTACAAGAAGCCTC...GAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCTCGCGTCCTCCTCTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CCA 90 bp AGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCAGGAGTTGGGCAGCCCTGGTGGAAACATATAACTTaGGGAGAGGGATTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: RTKGSRNPASTSGVGQPWWKHIT*GEGFPR
Trigger: CCGGGGAAATCCCTCTCCCCAAGTTATATGTTTCCA...CCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 72 bp GGTGGTACAGGTATGAGGGGGACTCCTGTGAATGTTTaGCAGAATCTTGCTGGGGCAGCCTCAGGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: GGTGMRGTPVNV*QNLAGAASGKE
Trigger: CTCCTTTCCTGAGGCTGCCCCAGCAAGATTCTGCAAAACATTCACAGGAGTCCCCCTCATACCTGTACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CCA 90 bp AGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCAGGAGTTGGGCAGCCCTGGCAGCTTTTCCATCTGTaGCGGAGGCTTCTTGTAAAT +
Preference number: 4 (lower is better)
Translates to: RTKGSRNPASTSGVGQPWQLFHL*RRLLVN
Trigger: ATTTACAAGAAGCCTCCGCCACAGATGGAAAAGCTG...CCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 72 bp GAGTGGCTCAAACACACTCACTCCCTTCATGCATACTaGGACTACGTAGTTGAGGCTCAGAGGTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: EWLKHTHSLHAY*DYVVEAQRSCL
Trigger: CAGGCAGGACCTCTGAGCCTCAACTACGTAGTCCAAGTATGCATGAAGGGAGTGAGTGTGTTTGAGCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR GCA 90 bp GAGGTCCTGCCTGGCCCATGCAATCTGTGGAAGGATGCTTACCTAAGCGTTCGTTTATCAGACAGGATGTaGTTGATGAAGGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: EVLPGPCNLWKDAYLSVRLSDRM*LMKAQP
Trigger: TGGCTGGGCCTTCATCAAGCACATCCTGTCTGATAA...ACGAACGCTTAGGTAAGCATCCTTCCACAGATTGCATGGGCCAGGCAGGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CCA 90 bp ACGAGGCCCCTTCCAAAAAGACCCTGCCCTCTGAGAGGCAGGCTGTGGCTTAGAAGAAGAACAAGGCCATaGAAACATATAACTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TRPLPKRPCPLRGRLWLRRRTRP*KHITWG
Trigger: TCCCCAAGTTATATGTTTCCATGGCCTTGTTCTTCT...TCTAAGCCACAGCCTGCCTCTCAGAGGGCAGGGTCTTTTTGGAAGGGGCCTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CCA 90 bp CCTGTGACTTTGTCACATGCCTTCTGCAGGCAGCCGCTGGTGTTCCTGCCCAATGGATGTGAATCCAAATaGTCCCAGACAGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PVTLSHAFCRQPLVFLPNGCESK*SQTERR
Trigger: TCTTCTTTCTGTCTGGGACCATTTGGATTCACATCC...ATTGGGCAGGAACACCAGCGGCTGCCTGCAGAAGGCATGTGACAAAGTCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CCA 90 bp CACAGGCAGAAGGGGGAGAGACACAGAGCAGAGCTGTTAATACCAGAGTGGCAGCCACTTCCACTGGAATaGAACAGCAAACTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: HRQKGERHRAELLIPEWQPLPLE*NSKLEK
Trigger: CTTCTCAAGTTTGCTGTTCCATTCCAGTGGAAGTGG...CTGCCACTCTGGTATTAACAGCTCTGCTCTGTGTCTCTCCCCCTTCTGCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 72 bp ACAAAACAAACACACCTCTACAGGACAGACAAGGCCTaGGAGGAACTGGGAGACTCCTTGGCCTGTGAACAC +
Preference number: 4 (lower is better)
Translates to: TKQTHLYRTDKA*EELGDSLACEH
Trigger: GTGTTCACAGGCCAAGGAGTCTCCCAGTTCCTCCAAGGCCTTGTCTGTCCTGTAGAGGTGTGTTTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR TCA 90 bp CCTGTGACTTTGTCACATGCCTTCTGCAGGCAGCCGCTGGTGTTCCTGCCCAATGCGGCCATCAACCAGTaGATTTTAAATACATCATTC +
Preference number: 4 (lower is better)
Translates to: PVTLSHAFCRQPLVFLPNAAINQ*ILNTSF
Trigger: GAATGATGTATTTAAAATTCACTGGTTGATGGCCGC...ATTGGGCAGGAACACCAGCGGCTGCCTGCAGAAGGCATGTGACAAAGTCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CCA 90 bp CTCCTTTGGGGGAATCAAATGAGCCTTCCAAGGAGATTGCCTAAGACCATCTGTCTGCTTACCAGCTTCTaGTGGGGATCTGACCTTGAC +
Preference number: 4 (lower is better)
Translates to: LLWGNQMSLPRRLPKTICLLTSF*WGSDLD
Trigger: GTCAAGGTCAGATCCCCACCAGAAGCTGGTAAGCAG...ACAGATGGTCTTAGGCAATCTCCTTGGAAGGCTCATTTGATTCCCCCAAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 72 bp ATTACAGCAGTTCTCAACCTGTGGGTCACGACTCCTTaGGGGGAATCAAATGAGCCTTCCAAGGAGATTGCC +
Preference number: 4 (lower is better)
Translates to: ITAVLNLWVTTP*GESNEPSKEIA
Trigger: GGCAATCTCCTTGGAAGGCTCATTTGATTCCCCCAAAGGAGTCGTGACCCACAGGTTGAGAACTGCTGTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 72 bp TGCCATCGTTCTGTCAGGAACGCGCTTGCTCACTGCTaGGCTATGAATAAGCTAGTTTCATTGACAGCAGTC +
Preference number: 4 (lower is better)
Translates to: CHRSVRNALAHC*AMNKLVSLTAV
Trigger: GACTGCTGTCAATGAAACTAGCTTATTCATAGCCAAGCAGTGAGCAAGCGCGTTCCTGACAGAACGATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR TCA 90 bp GCTAGAGAGTGGGGACACTTAGGTATTTACTCTGAAGTGGTTTTTGAAGGAGAAACGAGAGAGACTTGGTaGAAGGAAGGGCGGCCATCA +
Preference number: 4 (lower is better)
Translates to: AREWGHLGIYSEVVFEGETRETW*KEGRPS
Trigger: TGATGGCCGCCCTTCCTTTCACCAAGTCTCTCTCGT...TTCTCCTTCAAAAACCACTTCAGAGTAAATACCTAAGTGTCCCCACTCTCTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR TCA 90 bp TCTCTGAGCAGATCTGGCTGTTTCAGGTCTCTGAGCATGAGTGGCTCAAACACACAGGTAGGGGTTATCTaGAGCTGGGCGAAATTTATA +
Preference number: 4 (lower is better)
Translates to: SLSRSGCFRSLSMSGSNTQVGVI*SWAKFI
Trigger: TATAAATTTCGCCCAGCTTCAGATAACCCCTACCTG...TGTGTTTGAGCCACTCATGCTCAGAGACCTGAAACAGCCAGATCTGCTCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 72 bp ACACAAGCTTCCTCATGGAATCTTTATTGGGCGTATTaGCTTTGCAGTGAAGTGCCTCCATATAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TQASSWNLYWAY*LCSEVPPYSGQ
Trigger: CTGGCCACTATATGGAGGCACTTCACTGCAAAGCAAATACGCCCAATAAAGATTCCATGAGGAAGCTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR GCA 90 bp GCTAGAGAGTGGGGACACTTAGGTATTTACTCTGAAGTGGTTTTTGAAGGAGAAACAATCTCTGGTAACTaGTTACCAGCTTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: AREWGHLGIYSEVVFEGETISGN*LPASGG
Trigger: CCCACCAGAAGCTGGTAAGCAGTTACCAGAGATTGT...TTCTCCTTCAAAAACCACTTCAGAGTAAATACCTAAGTGTCCCCACTCTCTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 72 bp GTCAGAGCAGCAATACACAGAGTGAGTTTGCATAGTTaGCACTCTCTTGATAAAATGCTCCCTGGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: VRAAIHRVSLHS*HSLDKMLPGLE
Trigger: TTCTAAACCAGGGAGCATTTTATCAAGAGAGTGCAAACTATGCAAACTCACTCTGTGTATTGCTGCTCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
3UTR CAA 72 bp CTCCTTTGGGGGAATCAAATGAGCCTTCCAAGGAGATaGCCTAAGACCATCTGTATATCAGATATTTACATT +
Preference number: 4 (lower is better)
Translates to: LLWGNQMSLPRR*PKTICISDIYI
Trigger: AATGTAAATATCTGATATACAGATGGTCTTAGGCAATCTCCTTGGAAGGCTCATTTGATTCCCCCAAAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CAA 90 bp CAGTGCACCAGCCTGCGGCTGAGTATGCCAGAGAGGCCAGGGAGTCAGTGGCAAACCAACGAGAGAGACTaGGTGAAAGGAAGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: QCTSLRLSMPERPGSQWQTNERD*VKGRAA
Trigger: GGCCGCCCTTCCTTTCACCAAGTCTCTCTCGTTGGT...TTGCCACTGACTCCCTGGCCTCTCTGGCATACTCAGCCGCAGGCTGGTGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS TCA 90 bp GTGTTGAGATGGACTTTATGCCGCACATCATCTTTGAGCGCCAGGTaGTGGACGCGGCCCAAGACGGGGTGGACCAGCAGCTCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: VLRWTLCRTSSLSAR*WTRPKTGWTSSSSN
Trigger: GTTGCTGGAGCTGCTGGTCCACCCCGTCTTGGGCCGCGTCCATCACCTGGCGCTCAAAGATGATGTGCGGCATAAAGTCCATCTCAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CAA 90 bp AGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCAGGAGTTGGGCAGCCCTGGCGAGCCTCACTGTCTTaGGGGTTGGAGCTGACAGCA +
Preference number: 5 (lower is better)
Translates to: RTKGSRNPASTSGVGQPWRASLS*GLELTA
Trigger: TGCTGTCAGCTCCAACCCCAAAGACAGTGAGGCTCG...CCAGGGCTGCCCAACTCCTGAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CAA 90 bp CTTTGTCACATGCCTTCTGCAGGCAGCCGCTGGTGTTCCTGCCCAATCTCTGAGGAGAGGCTGCTGACGTaGACCACCATGTACCCATCC +
Preference number: 5 (lower is better)
Translates to: LCHMPSAGSRWCSCPISEERLLT*TTMYPS
Trigger: GGATGGGTACATGGTGGTCAACGTCAGCAGCCTCTC...CTCAGAGATTGGGCAGGAACACCAGCGGCTGCCTGCAGAAGGCATGTGACAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CAA 90 bp ACGAGGCCCCTTCCAAAAAGACCCTGCCCTCTGAGAGGCAGGCTGTGGCTTAGAACCATGTACCCATCCTaGAAGAACCCGAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: TRPLPKRPCPLRGRLWLRTMYPS*KNPKVL
Trigger: CAACACCTTCGGGTTCTTCAAGGATGGGTACATGGT...TCTAAGCCACAGCCTGCCTCTCAGAGGGCAGGGTCTTTTTGGAAGGGGCCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CAA 90 bp GGGGTGAGAGGAGGACGCGAGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCAATGGAACAGCAAACTaGAGAAGGAAGGCGATGATC +
Preference number: 5 (lower is better)
Translates to: GVRGGREDQGKQKSCEHFNGTAN*RRKAMI
Trigger: GATCATCGCCTTCCTTCTCAAGTTTGCTGTTCCATT...GAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCTCGCGTCCTCCTCTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CAA 90 bp GAGAGACACAGAGCAGAGCTGTTAATACCAGAGTGGCAGTGCAATGCACACCCCGGCTCCACAGCACCGTaGCTCACTTTCTTCACCTTC +
Preference number: 5 (lower is better)
Translates to: ERHRAELLIPEWQCNAHPGSTAP*LTFFTF
Trigger: GAAGGTGAAGAAAGTGAGCAACGGTGCTGTGGAGCC...GGGGTGTGCATTGCACTGCCACTCTGGTATTAACAGCTCTGCTCTGTGTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CAA 90 bp CTTGGCAGAGCGAGGTTGTCCTTCTGGGTGTGTGGAACTGGGCCAGCAACCCCAAGGATTTTCTCATCCTaGCTGAAGACAATCTCTGGT +
Preference number: 5 (lower is better)
Translates to: LGRARLSFWVCGTGPATPRIFSS*LKTISG
Trigger: ACCAGAGATTGTCTTCAGCAAGGATGAGAAAATCCT...TGGGGTTGCTGGCCCAGTTCCACACACCCAGAAGGACAACCTCGCTCTGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS TCA 90 bp GCCTCACTGTCTTTGGGGTTGGAGCTGACAGCAGGCTCCTGGCTCTaGCTCAGGATTTTCTCATCCTTGCTGAAGACAATCTCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: ASLSLGLELTAGSWL*LRIFSSLLKTISGN
Trigger: GTTACCAGAGATTGTCTTCAGCAAGGATGAGAAAATCCTGAGTCAGAGCCAGGAGCCTGCTGTCAGCTCCAACCCCAAAGACAGTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CAA 90 bp CCACACCACAATCCAGATCCTAAGAGTACAAAAATGTGTGTCCGTGGCACTTGCTCACTGTCTTTGGGGTaGGAGCTGACAGCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: PHHNPDPKSTKMCVRGTCSLSLG*ELTAGS
Trigger: GGAGCCTGCTGTCAGCTCCAACCCCAAAGACAGTGA...GCAAGTGCCACGGACACACATTTTTGTACTCTTAGGATCTGGATTGTGGTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CAA 90 bp CTCCTTTGGGGGAATCAAATGAGCCTTCCAAGGAGATTGCCTAAGACCATCTGTTCACCAGGCTTCACGTaGTTGCCTGAGCACTTGTGG +
Preference number: 5 (lower is better)
Translates to: LLWGNQMSLPRRLPKTICSPGFT*LPEHLW
Trigger: CCACAAGTGCTCAGGCAACAACGTGAAGCCTGGTGA...ACAGATGGTCTTAGGCAATCTCCTTGGAAGGCTCATTTGATTCCCCCAAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS-3UTR CAA 90 bp GGGGTGAGAGGAGGACGCGAGGACCAAGGGAAGCAGAAATCCTGCGAGCACTTCATCATGAAGATCTTCTaGTCTTTATCAGACAGGATG +
Preference number: 5 (lower is better)
Translates to: GVRGGREDQGKQKSCEHFIMKIF*SLSDRM
Trigger: CATCCTGTCTGATAAAGACAAGAAGATCTTCATGAT...GAAGTGCTCGCAGGATTTCTGCTTCCCTTGGTCCTCGCGTCCTCCTCTCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS CCA 90 bp CGTGGCTGTTTCATCCAGCAGCTGGTAGAGCCACTTCCACTGGAATaGAACAGCAAACTTGAGAAGGAAGGCGATGATCCTGGTAAAGTA +
Preference number: 5 (lower is better)
Translates to: RGCFIQQLVEPLPLE*NSKLEKEGDDPGKV
Trigger: TACTTTACCAGGATCATCGCCTTCCTTCTCAAGTTTGCTGTTCCATTCCAGTGGAAGTGGCTCTACCAGCTGCTGGATGAAACAGCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS TCA 72 bp TGGACTTTATGCCGCACATCATCTTTGAGCGCCAGGTaGTGGACGCGGCCCAAGACGGGGTGGACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: WTLCRTSSLSAR*WTRPKTGWTSS
Trigger: GCTGCTGGTCCACCCCGTCTTGGGCCGCGTCCATCACCTGGCGCTCAAAGATGATGTGCGGCATAAAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS CAA 72 bp GCTCCCTCAGGCTCGTTCACAGAGAGGCTGCTGACGTaGACCACCATGTACCCATCCTTGAAGAACCCGAAG +
Preference number: 6 (lower is better)
Translates to: APSGSFTERLLT*TTMYPSLKNPK
Trigger: CTTCGGGTTCTTCAAGGATGGGTACATGGTGGTCAACGTCAGCAGCCTCTCTGTGAACGAGCCTGAGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS CAA 90 bp TTGTCCGTGGCTCCCTCAGGCTCGTTCACAGAGAGGCTGCTGACGTaGACCACCATGTACCCATCCTTGAAGAACCCGAAGGTGTTGAGA +
Preference number: 6 (lower is better)
Translates to: LSVAPSGSFTERLLT*TTMYPSLKNPKVLR
Trigger: TCTCAACACCTTCGGGTTCTTCAAGGATGGGTACATGGTGGTCAACGTCAGCAGCCTCTCTGTGAACGAGCCTGAGGGAGCCACGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS CAA 72 bp GTGATAGCCTTTGAGTCCACTGTACTTCGTCCAGCCTaGAAACCATCGAGGGTTCTCCGAGCCTCACTGTCT +
Preference number: 6 (lower is better)
Translates to: VIAFESTVLRPA*KPSRVLRASLS
Trigger: AGACAGTGAGGCTCGGAGAACCCTCGATGGTTTCAAGGCTGGACGAAGTACAGTGGACTCAAAGGCTATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS CAA 90 bp TCGTTCACAGAGAGGCTGCTGACGTTGACCACCATGTACCCATCCTaGAAGAACCCGAAGGTGTTGAGATGGACTTTATGCCGCACATCA +
Preference number: 6 (lower is better)
Translates to: SFTERLLTLTTMYPS*KNPKVLRWTLCRTS
Trigger: TGATGTGCGGCATAAAGTCCATCTCAACACCTTCGGGTTCTTCAAGGATGGGTACATGGTGGTCAACGTCAGCAGCCTCTCTGTGAACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS TCA 72 bp TCTTTGGGGTTGGAGCTGACAGCAGGCTCCTGGCTCTaGCTCAGGATTTTCTCATCCTTGCTGAAGACAATC +
Preference number: 6 (lower is better)
Translates to: SLGLELTAGSWL*LRIFSSLLKTI
Trigger: GATTGTCTTCAGCAAGGATGAGAAAATCCTGAGTCAGAGCCAGGAGCCTGCTGTCAGCTCCAACCCCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS CCA 72 bp GAAATTTATACCCCGTCAGGACAAAGAACACCAGCGTaGCTGTTTCATCCAGCAGCTGGTAGAGCCACTTCC +
Preference number: 6 (lower is better)
Translates to: EIYTPSGQRTPA*LFHPAAGRATS
Trigger: GGAAGTGGCTCTACCAGCTGCTGGATGAAACAGCCACGCTGGTGTTCTTTGTCCTGACGGGGTATAAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS CAA 72 bp GAGAGGCTGCTGACGTTGACCACCATGTACCCATCCTaGAAGAACCCGAAGGTGTTGAGATGGACTTTATGC +
Preference number: 6 (lower is better)
Translates to: ERLLTLTTMYPS*KNPKVLRWTLC
Trigger: GCATAAAGTCCATCTCAACACCTTCGGGTTCTTCAAGGATGGGTACATGGTGGTCAACGTCAGCAGCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS CCA 72 bp ATGTACCCATCCTTGAAGAACCCGAAGGTGTTGAGATaGACTTTATGCCGCACATCATCTTTGAGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: MYPSLKNPKVLR*TLCRTSSLSAR
Trigger: CCTGGCGCTCAAAGATGATGTGCGGCATAAAGTCCATCTCAACACCTTCGGGTTCTTCAAGGATGGGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS CCA 72 bp TTCATCCAGCAGCTGGTAGAGCCACTTCCACTGGAATaGAACAGCAAACTTGAGAAGGAAGGCGATGATCCT +
Preference number: 6 (lower is better)
Translates to: FIQQLVEPLPLE*NSKLEKEGDDP
Trigger: AGGATCATCGCCTTCCTTCTCAAGTTTGCTGTTCCATTCCAGTGGAAGTGGCTCTACCAGCTGCTGGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS CCA 72 bp TCCAAATGGTCCCAGACAGAAAGAAGAACAAGGCCATaGAAACATATAACTTGGGGAGAGGGATTTCCCCGG +
Preference number: 6 (lower is better)
Translates to: SKWSQTERRTRP*KHITWGEGFPR
Trigger: CCGGGGAAATCCCTCTCCCCAAGTTATATGTTTCCATGGCCTTGTTCTTCTTTCTGTCTGGGACCATTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS CAA 72 bp ACCACCATGTACCCATCCTTGAAGAACCCGAAGGTGTaGAGATGGACTTTATGCCGCACATCATCTTTGAGC +
Preference number: 6 (lower is better)
Translates to: TTMYPSLKNPKV*RWTLCRTSSLS
Trigger: GCTCAAAGATGATGTGCGGCATAAAGTCCATCTCAACACCTTCGGGTTCTTCAAGGATGGGTACATGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7
CDS CAA 72 bp GGTAACTGCTTACCAGCTTCTGGTGGGGATCTGACCTaGACTATGCTTCCAGAGATGTCTAAGATGACAAGA +
Preference number: 6 (lower is better)
Translates to: GNCLPASGGDLT*TMLPEMSKMTR
Trigger: TCTTGTCATCTTAGACATCTCTGGAAGCATAGTCAAGGTCAGATCCCCACCAGAAGCTGGTAAGCAGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000056433.7