RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR101 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036357

Ensembl transcript IDs: ENSMUST00000057645.6

Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGGAGGAAGAAGCCATATATAATTGGCACGGTGCCTGTTCTTCATaGGTCTTAGGCTACAGTTTGTTGTTTCCAGCACGTTTCTGCCTC +
Preference number: 1 (lower is better)
Translates to: MEEEAIYNWHGACSS*VLGYSLLFPARFCL
Trigger: GAGGCAGAAACGTGCTGGAAACAACAAACTGTAGCCTAAGACCCATGAAGAACAGGCACCGTGCCAATTATATATGGCTTCTTCCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 90 bp TACCAGAATAAGTTCTTGCTTGTCACGTACCAGGGATGTAAGGAATaGAAGGCACCTCTTCCCGAATACCACTGTGGAGCCATGTTACAT +
Preference number: 1 (lower is better)
Translates to: YQNKFLLVTYQGCKE*KAPLPEYHCGAMLH
Trigger: ATGTAACATGGCTCCACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGACAAGCAAGAACTTATTCTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CCA 90 bp ATCCACCTTTGTTGCAGCTTGCAGTACAGTCTTTGCACCATACTGTaGTACTCTCTGGTACAGAAATCTGCTCATTTGGTGATCCATCCA +
Preference number: 1 (lower is better)
Translates to: IHLCCSLQYSLCTIL*YSLVQKSAHLVIHP
Trigger: TGGATGGATCACCAAATGAGCAGATTTCTGTACCAGAGAGTACCACAGTATGGTGCAAAGACTGTACTGCAAGCTGCAACAAAGGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 90 bp CCCTTAGTGTGTATACTGCTAAGATATGGAGGCTTAGGGAGGCAATaGTGGAAACCTAACTTCTATTGGCAGCCTTCATGTTCTTTGAGG +
Preference number: 1 (lower is better)
Translates to: PLVCILLRYGGLGRQ*WKPNFYWQPSCSLR
Trigger: CCTCAAAGAACATGAAGGCTGCCAATAGAAGTTAGGTTTCCATCATTGCCTCCCTAAGCCTCCATATCTTAGCAGTATACACACTAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 90 bp ATCACAACCAGTTTAGAATGCATTCACTTAAAATCAACCAATATATaGAACCGTGACTTTGGGCAGAGTCTCTGGGACGACCTGCCCATG +
Preference number: 1 (lower is better)
Translates to: ITTSLECIHLKSTNI*NRDFGQSLWDDLPM
Trigger: CATGGGCAGGTCGTCCCAGAGACTCTGCCCAAAGTCACGGTTTCATATATTGGTTGATTTTAAGTGAATGCATTCTAAACTGGTTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CCA 90 bp TCTATCTATGTATTGAAGAAAACAGGCATACCAGTGCCAGTGGGGTaGAGAACTGCAGGTGAGGACTTCAGCCAAGATGATAATTTAGTT +
Preference number: 1 (lower is better)
Translates to: SIYVLKKTGIPVPVG*RTAGEDFSQDDNLV
Trigger: AACTAAATTATCATCTTGGCTGAAGTCCTCACCTGCAGTTCTCCACCCCACTGGCACTGGTATGCCTGTTTTCTTCAATACATAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 90 bp CAGTTTAGAATGCATTCACTTAAAATCAACCAATATATGAAACCGTaGCTTTGGGCAGAGTCTCTGGGACGACCTGCCCATGTAACAGTA +
Preference number: 1 (lower is better)
Translates to: QFRMHSLKINQYMKP*LWAESLGRPAHVTV
Trigger: TACTGTTACATGGGCAGGTCGTCCCAGAGACTCTGCCCAAAGTCACGGTTTCATATATTGGTTGATTTTAAGTGAATGCATTCTAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 90 bp TCAATTCATAAATTTGATTTGAGTGTGAGGGATTTCTCTTCTCGCTaGCAGGTGGACAATAAATTCCGACCCATTTGTGCACCTGAAGGT +
Preference number: 1 (lower is better)
Translates to: SIHKFDLSVRDFSSR*QVDNKFRPICAPEG
Trigger: ACCTTCAGGTGCACAAATGGGTCGGAATTTATTGTCCACCTGTCAGCGAGAAGAGAAATCCCTCACACTCAAATCAAATTTATGAATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR GCA 90 bp ACAGATATTAATCTTCACACAGCAGACCTTCTTAAGTGTACACATTaGTGTGGTTTCCCCTTAGTGTGTATACTGCTAAGATATGGAGGC +
Preference number: 1 (lower is better)
Translates to: TDINLHTADLLKCTH*CGFPLVCILLRYGG
Trigger: GCCTCCATATCTTAGCAGTATACACACTAAGGGGAAACCACAGCAATGTGTACACTTAAGAAGGTCTGCTGTGTGAAGATTAATATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 90 bp GTACAGAAATCTGCTCATTTGGTGATCCATCCACCTAGCTTTGCTTaGTTTGGTCAATTTCTTTTCTTTCAGCTGCACACAATATGTAGC +
Preference number: 1 (lower is better)
Translates to: VQKSAHLVIHPPSFA*FGQFLFFQLHTICS
Trigger: GCTACATATTGTGTGCAGCTGAAAGAAAAGAAATTGACCAAATCAAGCAAAGCTAGGTGGATGGATCACCAAATGAGCAGATTTCTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 90 bp GGCAATGATGGAAACCTAACTTCTATTGGCAGCCTTCATGTTCTTTaGGGATTCTTACCCTATTTACCAAAAAGCAATGAACTTGCCAGT +
Preference number: 1 (lower is better)
Translates to: GNDGNLTSIGSLHVL*GFLPYLPKSNELAS
Trigger: ACTGGCAAGTTCATTGCTTTTTGGTAAATAGGGTAAGAATCCTCAAAGAACATGAAGGCTGCCAATAGAAGTTAGGTTTCCATCATTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CAA 90 bp TTATTTATCTGCCGTGTGGTGGGAAAGGATGTGCGCGCAACCCCTTaGCCTGAAATGGTAAGCACTGGCACTAATGAGATTGTGAGCGGA +
Preference number: 2 (lower is better)
Translates to: LFICRVVGKDVRATP*PEMVSTGTNEIVSG
Trigger: TCCGCTCACAATCTCATTAGTGCCAGTGCTTACCATTTCAGGCAAAGGGGTTGCGCGCACATCCTTTCCCACCACACGGCAGATAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR GCA 90 bp TGGAAACCTAACTTCTATTGGCAGCCTTCATGTTCTTTGAGGATTCTTACCCTATGGTGGGAAAGGATGTaGGCGCAACCCCTTTGCCTG +
Preference number: 2 (lower is better)
Translates to: WKPNFYWQPSCSLRILTLWWERM*AQPLCL
Trigger: CAGGCAAAGGGGTTGCGCGCACATCCTTTCCCACCA...TAGGGTAAGAATCCTCAAAGAACATGAAGGCTGCCAATAGAAGTTAGGTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR GCA 90 bp TCACGTACCAGGGATGTAAGGAATGAAAGGCACCTCTTCCCGAATACCACTGTGACCTTTGTTGCAGCTTaGAGTACAGTCTTTGCACCA +
Preference number: 2 (lower is better)
Translates to: SRTRDVRNERHLFPNTTVTFVAA*STVFAP
Trigger: TGGTGCAAAGACTGTACTGCAAGCTGCAACAAAGGT...CACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR CCA 90 bp TCACGTACCAGGGATGTAAGGAATGAAAGGCACCTCTTCCCGAATACCACTGTGAGGCTTGCCCTTTTCTaGATCCCTTTTGAAGACCTA +
Preference number: 2 (lower is better)
Translates to: SRTRDVRNERHLFPNTTVRLALF*IPFEDL
Trigger: TAGGTCTTCAAAAGGGATCCAGAAAAGGGCAAGCCT...CACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR GCA 90 bp TCACGTACCAGGGATGTAAGGAATGAAAGGCACCTCTTCCCGAATACCACTGTGCTCCATTTCTTCTTTTaGCCTAGCTCCTCATTTCAG +
Preference number: 2 (lower is better)
Translates to: SRTRDVRNERHLFPNTTVLHFFF*PSSSFQ
Trigger: CTGAAATGAGGAGCTAGGGCAAAAGAAGAAATGGAG...CACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR GCA 90 bp TCACGTACCAGGGATGTAAGGAATGAAAGGCACCTCTTCCCGAATACCACTGTGTGCACATTAAACATTTaGCATGGAGGAAGAAGCCAT +
Preference number: 2 (lower is better)
Translates to: SRTRDVRNERHLFPNTTVCTLNI*HGGRSH
Trigger: ATGGCTTCTTCCTCCATGGCAAATGTTTAATGTGCA...CACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR GCA 90 bp TCACGTACCAGGGATGTAAGGAATGAAAGGCACCTCTTCCCGAATACCACTGTGTTCTTTTCTTTCAGCTaGACACAATATGTAGCCCTA +
Preference number: 2 (lower is better)
Translates to: SRTRDVRNERHLFPNTTVFFSFS*TQYVAL
Trigger: TAGGGCTACATATTGTGTGCAGCTGAAAGAAAAGAA...CACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR TCA 90 bp CTAGCTCCTCATTTCAGGCTTGCCCTTTTCTGGATCCCTTTTGAAGACCTAGAACCACCTAGCTTTGCTTaGTTTGGTCAATTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: LAPHFRLALFWIPFEDLEPPSFA*FGQFLF
Trigger: GAAAAGAAATTGACCAAATCAAGCAAAGCTAGGTGG...TTCTAGGTCTTCAAAAGGGATCCAGAAAAGGGCAAGCCTGAAATGAGGAGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR GCA 90 bp CTAGCTCCTCATTTCAGGCTTGCCCTTTTCTGGATCCCTTTTGAAGACCTAGAAAAACCAGATAGTCCTTaGTTTGGGAAATTTAGAGCC +
Preference number: 2 (lower is better)
Translates to: LAPHFRLALFWIPFEDLEKPDSP*FGKFRA
Trigger: GGCTCTAAATTTCCCAAAGCAAGGACTATCTGGTTT...TTCTAGGTCTTCAAAAGGGATCCAGAAAAGGGCAAGCCTGAAATGAGGAGCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CAA 90 bp AAACCACAAATGTTAATCTCTCTTCATTCCCCAAGCAGGAGTCTGTaGTTCCTGTCTGGCACTAAAGGTATCACAACCAGTTTAGAATGC +
Preference number: 2 (lower is better)
Translates to: KPQMLISLHSPSRSL*FLSGTKGITTSLEC
Trigger: GCATTCTAAACTGGTTGTGATACCTTTAGTGCCAGACAGGAACAACAGACTCCTGCTTGGGGAATGAAGAGAGATTAACATTTGTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR TCA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAACATGAGTTCCTGACCTaGAGGCCAAATAGTCCTTAT +
Preference number: 2 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQHEFLT*RPNSPY
Trigger: ATAAGGACTATTTGGCCTTCAGGTCAGGAACTCATG...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR GCA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAATCCTCATTTCAGGCTTaGCCTTTTCTGGATCCCTTT +
Preference number: 2 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQSSFQA*PFLDPF
Trigger: AAAGGGATCCAGAAAAGGGCAAGCCTGAAATGAGGA...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR CCA 90 bp TGGAAACCTAACTTCTATTGGCAGCCTTCATGTTCTTTGAGGATTCTTACCCTATACTGTGGTACTCTCTaGTACAGAAATCTGCTCATT +
Preference number: 2 (lower is better)
Translates to: WKPNFYWQPSCSLRILTLYCGTL*YRNLLI
Trigger: AATGAGCAGATTTCTGTACCAGAGAGTACCACAGTA...TAGGGTAAGAATCCTCAAAGAACATGAAGGCTGCCAATAGAAGTTAGGTTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CAA 90 bp GTTAAAATGAAGGGAAGTGTGAGAGTTAACTTTAGATACAGTGCCTaGTCTGAGGTTATCACAAGTCCTAAATTAGTGAAGTGGAAGTCG +
Preference number: 2 (lower is better)
Translates to: VKMKGSVRVNFRYSA*SEVITSPKLVKWKS
Trigger: CGACTTCCACTTCACTAATTTAGGACTTGTGATAACCTCAGACAAGGCACTGTATCTAAAGTTAACTCTCACACTTCCCTTCATTTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR TCA 90 bp ACATCACTCATTTTACTGATGACACTAGCCACAAACACACACAATCTAATCTCTGAGAGAGCCACAGGTTaGAAAGATATCTATGCATGT +
Preference number: 2 (lower is better)
Translates to: TSLILLMTLATNTHNLISERATG*KDIYAC
Trigger: ACATGCATAGATATCTTTTCAACCTGTGGCTCTCTC...AGAGATTAGATTGTGTGTGTTTGTGGCTAGTGTCATCAGTAAAATGAGTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR GCA 90 bp TGGAAACCTAACTTCTATTGGCAGCCTTCATGTTCTTTGAGGATTCTTACCCTATTAGCTCCGTGGATATaGCTTATTTCTCCATTTCTT +
Preference number: 2 (lower is better)
Translates to: WKPNFYWQPSCSLRILTLLAPWI*LISPFL
Trigger: AAGAAATGGAGAAATAAGGCATATCCACGGAGCTAA...TAGGGTAAGAATCCTCAAAGAACATGAAGGCTGCCAATAGAAGTTAGGTTTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR GCA 90 bp ACATCACTCATTTTACTGATGACACTAGCCACAAACACACACAATCTAATCTCTCTTAAGTGTACACATTaGTGTGGTTTCCCCTTAGTG +
Preference number: 2 (lower is better)
Translates to: TSLILLMTLATNTHNLISLKCTH*CGFPLV
Trigger: CACTAAGGGGAAACCACAGCAATGTGTACACTTAAG...AGAGATTAGATTGTGTGTGTTTGTGGCTAGTGTCATCAGTAAAATGAGTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR CCA 90 bp ACATCACTCATTTTACTGATGACACTAGCCACAAACACACACAATCTAATCTCTTATACTGCTAAGATATaGAGGCTTAGGGAGGCAATG +
Preference number: 2 (lower is better)
Translates to: TSLILLMTLATNTHNLISYTAKI*RLREAM
Trigger: CATTGCCTCCCTAAGCCTCCATATCTTAGCAGTATA...AGAGATTAGATTGTGTGTGTTTGTGGCTAGTGTCATCAGTAAAATGAGTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR TCA 90 bp ACATCACTCATTTTACTGATGACACTAGCCACAAACACACACAATCTAATCTCTTTTCTGGATCCCTTTTaGAGACCTAGAAGCTTTCTT +
Preference number: 2 (lower is better)
Translates to: TSLILLMTLATNTHNLISFLDPF*RPRSFL
Trigger: AAGAAAGCTTCTAGGTCTTCAAAAGGGATCCAGAAA...AGAGATTAGATTGTGTGTGTTTGTGGCTAGTGTCATCAGTAAAATGAGTGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CAA 90 bp ACAGGCAGAATACCAAGAACAGCTCCAAACCAGATAGTCCTTGCTTaGGGAAATTTAGAGCCTAATATGTGTACATCTGTATATATATTT +
Preference number: 2 (lower is better)
Translates to: TGRIPRTAPNQIVLA*GNLEPNMCTSVYIF
Trigger: AAATATATATACAGATGTACACATATTAGGCTCTAAATTTCCCAAAGCAAGGACTATCTGGTTTGGAGCTGTTCTTGGTATTCTGCCTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CCA 72 bp CAAGTCCCTACTTCTTCCTTTTATTTATCTGCCGTGTaGTGGGAAAGGATGTGCGCGCAACCCCTTTGCCTG +
Preference number: 3 (lower is better)
Translates to: QVPTSSFYLSAV*WERMCAQPLCL
Trigger: CAGGCAAAGGGGTTGCGCGCACATCCTTTCCCACCACACGGCAGATAAATAAAAGGAAGAAGTAGGGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CCA 72 bp GTCCCTACTTCTTCCTTTTATTTATCTGCCGTGTGGTaGGAAAGGATGTGCGCGCAACCCCTTTGCCTGAAA +
Preference number: 3 (lower is better)
Translates to: VPTSSFYLSAVW*ERMCAQPLCLK
Trigger: TTTCAGGCAAAGGGGTTGCGCGCACATCCTTTCCCACCACACGGCAGATAAATAAAAGGAAGAAGTAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CCA 72 bp GTATTGAAGAAAACAGGCATACCAGTGCCAGTGGGGTaGAGAACTGCAGGTGAGGACTTCAGCCAAGATGAT +
Preference number: 3 (lower is better)
Translates to: VLKKTGIPVPVG*RTAGEDFSQDD
Trigger: ATCATCTTGGCTGAAGTCCTCACCTGCAGTTCTCCACCCCACTGGCACTGGTATGCCTGTTTTCTTCAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR CAA 90 bp TCACGTACCAGGGATGTAAGGAATGAAAGGCACCTCTTCCCGAATACCACTGTGCAGAAATCTGCTCATTaGGTGATCCATCCACCTAGC +
Preference number: 3 (lower is better)
Translates to: SRTRDVRNERHLFPNTTVQKSAH*VIHPPS
Trigger: GCTAGGTGGATGGATCACCAAATGAGCAGATTTCTG...CACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR GCA 72 bp AAAGATCCAAGTCCCTACTTCTTCCTTTTATTTATCTaGCGTGTGGTGGGAAAGGATGTGCGCGCAACCCCT +
Preference number: 3 (lower is better)
Translates to: KDPSPYFFLLFI*RVVGKDVRATP
Trigger: AGGGGTTGCGCGCACATCCTTTCCCACCACACGGCAGATAAATAAAAGGAAGAAGTAGGGACTTGGATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR CAA 90 bp CTAGCTCCTCATTTCAGGCTTGCCCTTTTCTGGATCCCTTTTGAAGACCTAGAACTGCGTAATCCACCTTaGTTGCAGCTTGCAGTACAG +
Preference number: 3 (lower is better)
Translates to: LAPHFRLALFWIPFEDLELRNPP*LQLAVQ
Trigger: CTGTACTGCAAGCTGCAACAAAGGTGGATTACGCAG...TTCTAGGTCTTCAAAAGGGATCCAGAAAAGGGCAAGCCTGAAATGAGGAGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR CAA 90 bp TCACGTACCAGGGATGTAAGGAATGAAAGGCACCTCTTCCCGAATACCACTGTGCCTAAAGTCCGTGCTTaGACAGGCTTATACTTTTCA +
Preference number: 3 (lower is better)
Translates to: SRTRDVRNERHLFPNTTVPKVRA*TGLYFS
Trigger: TGAAAAGTATAAGCCTGTCAAAGCACGGACTTTAGG...CACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR CAA 90 bp CTAGCTCCTCATTTCAGGCTTGCCCTTTTCTGGATCCCTTTTGAAGACCTAGAACTTGCAGTACAGTCTTaGCACCATACTGTGGTACTC +
Preference number: 3 (lower is better)
Translates to: LAPHFRLALFWIPFEDLELAVQS*HHTVVL
Trigger: GAGTACCACAGTATGGTGCAAAGACTGTACTGCAAG...TTCTAGGTCTTCAAAAGGGATCCAGAAAAGGGCAAGCCTGAAATGAGGAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR GCA 72 bp AAATTCCGACCCATTTGTGCACCTGAAGGTAAGTTGTaGCAATGGGAACATGGCCCCAGGACTATAGTTTTG +
Preference number: 3 (lower is better)
Translates to: KFRPICAPEGKL*QWEHGPRTIVL
Trigger: CAAAACTATAGTCCTGGGGCCATGTTCCCATTGGCACAACTTACCTTCAGGTGCACAAATGGGTCGGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR CAA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAAGTGCGCGCAACCCCTTaGCCTGAAATGGTAAGCACT +
Preference number: 3 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQVRATP*PEMVST
Trigger: AGTGCTTACCATTTCAGGCAAAGGGGTTGCGCGCAC...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 72 bp ATGCATTCACTTAAAATCAACCAATATATGAAACCGTaGCTTTGGGCAGAGTCTCTGGGACGACCTGCCCAT +
Preference number: 3 (lower is better)
Translates to: MHSLKINQYMKP*LWAESLGRPAH
Trigger: ATGGGCAGGTCGTCCCAGAGACTCTGCCCAAAGTCACGGTTTCATATATTGGTTGATTTTAAGTGAATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR GCA 72 bp CTTTCTTTACAGTCTATCTGCGTAATCCACCTTTGTTaGAGCTTGCAGTACAGTCTTTGCACCATACTGTGG +
Preference number: 3 (lower is better)
Translates to: LSLQSICVIHLC*SLQYSLCTILW
Trigger: CCACAGTATGGTGCAAAGACTGTACTGCAAGCTGCAACAAAGGTGGATTACGCAGATAGACTGTAAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CCA 72 bp TTTGCCCTAGCTCCTCATTTCAGGCTTGCCCTTTTCTaGATCCCTTTTGAAGACCTAGAAGCTTTCTTTACA +
Preference number: 3 (lower is better)
Translates to: FALAPHFRLALF*IPFEDLEAFFT
Trigger: TGTAAAGAAAGCTTCTAGGTCTTCAAAAGGGATCCAGAAAAGGGCAAGCCTGAAATGAGGAGCTAGGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 72 bp TGTGGTACTCTCTGGTACAGAAATCTGCTCATTTGGTaGTCCATCCACCTAGCTTTGCTTGATTTGGTCAAT +
Preference number: 3 (lower is better)
Translates to: CGTLWYRNLLIW*SIHLALLDLVN
Trigger: ATTGACCAAATCAAGCAAAGCTAGGTGGATGGATCACCAAATGAGCAGATTTCTGTACCAGAGAGTACCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR GCA 72 bp GCTTTGCTTGATTTGGTCAATTTCTTTTCTTTCAGCTaGACACAATATGTAGCCCTAGCCCATGAGTTCCTG +
Preference number: 3 (lower is better)
Translates to: ALLDLVNFFSFS*TQYVALAHEFL
Trigger: CAGGAACTCATGGGCTAGGGCTACATATTGTGTGCAGCTGAAAGAAAAGAAATTGACCAAATCAAGCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR GCA 72 bp TTCACATCTATTCCCAGCTGTACCAGAATAAGTTCTTaGTTGTCACGTACCAGGGATGTAAGGAATGAAAGG +
Preference number: 3 (lower is better)
Translates to: FTSIPSCTRISS*LSRTRDVRNER
Trigger: CCTTTCATTCCTTACATCCCTGGTACGTGACAAGCAAGAACTTATTCTGGTACAGCTGGGAATAGATGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CCA 72 bp ACTAACTGTGCTAGTGTGCACATTAAACATTTGCCATaGAGGAAGAAGCCATATATAATTGGCACGGTGCCT +
Preference number: 3 (lower is better)
Translates to: TNCASVHIKHLP*RKKPYIIGTVP
Trigger: AGGCACCGTGCCAATTATATATGGCTTCTTCCTCCATGGCAAATGTTTAATGTGCACACTAGCACAGTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR CAA 90 bp TGGAAACCTAACTTCTATTGGCAGCCTTCATGTTCTTTGAGGATTCTTACCCTAGTCTTAGGCTACAGTTaGTTGTTTCCAGCACGTTTC +
Preference number: 3 (lower is better)
Translates to: WKPNFYWQPSCSLRILTLVLGYS*LFPARF
Trigger: GAAACGTGCTGGAAACAACAAACTGTAGCCTAAGAC...TAGGGTAAGAATCCTCAAAGAACATGAAGGCTGCCAATAGAAGTTAGGTTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 72 bp TCTGCTCATTTGGTGATCCATCCACCTAGCTTTGCTTaGTTTGGTCAATTTCTTTTCTTTCAGCTGCACACA +
Preference number: 3 (lower is better)
Translates to: SAHLVIHPPSFA*FGQFLFFQLHT
Trigger: TGTGTGCAGCTGAAAGAAAAGAAATTGACCAAATCAAGCAAAGCTAGGTGGATGGATCACCAAATGAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR GCA 72 bp ACCTGTTTTGTGGCTTATAGACTAACTGTGCTAGTGTaGACATTAAACATTTGCCATGGAGGAAGAAGCCAT +
Preference number: 3 (lower is better)
Translates to: TCFVAYRLTVLV*TLNICHGGRSH
Trigger: ATGGCTTCTTCCTCCATGGCAAATGTTTAATGTGCACACTAGCACAGTTAGTCTATAAGCCACAAAACAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR GCA 72 bp AATCTTCACACAGCAGACCTTCTTAAGTGTACACATTaGTGTGGTTTCCCCTTAGTGTGTATACTGCTAAGA +
Preference number: 3 (lower is better)
Translates to: NLHTADLLKCTH*CGFPLVCILLR
Trigger: TCTTAGCAGTATACACACTAAGGGGAAACCACAGCAATGTGTACACTTAAGAAGGTCTGCTGTGTGAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 72 bp AACTTTCCAGTCAGGTACTGGTTCCTGTTTAGGTCTTaGAACTGCAGTACTCTTTTAAAATCCTCCTGCTAT +
Preference number: 3 (lower is better)
Translates to: NFPVRYWFLFRS*NCSTLLKSSCY
Trigger: ATAGCAGGAGGATTTTAAAAGAGTACTGCAGTTTCAAGACCTAAACAGGAACCAGTACCTGACTGGAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 72 bp AGTTTAGAATGCATTCACTTAAAATCAACCAATATATaGAACCGTGACTTTGGGCAGAGTCTCTGGGACGAC +
Preference number: 3 (lower is better)
Translates to: SLECIHLKSTNI*NRDFGQSLWDD
Trigger: GTCGTCCCAGAGACTCTGCCCAAAGTCACGGTTTCATATATTGGTTGATTTTAAGTGAATGCATTCTAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR GCA 72 bp GGCCATTTCAATACTATTTGGTTGTATCAACTCTCCTaGATTCTGAATATGGTAATCCCACACCCTCACAAT +
Preference number: 3 (lower is better)
Translates to: GHFNTIWLYQLS*ILNMVIPHPHN
Trigger: ATTGTGAGGGTGTGGGATTACCATATTCAGAATGCAGGAGAGTTGATACAACCAAATAGTATTGAAATGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR CAA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAACAGCCTTCATGTTCTTaGAGGATTCTTACCCTATTT +
Preference number: 3 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQQPSCS*RILTLF
Trigger: AAATAGGGTAAGAATCCTCAAAGAACATGAAGGCTG...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 72 bp GGAAACCTAACTTCTATTGGCAGCCTTCATGTTCTTTaGGGATTCTTACCCTATTTACCAAAAAGCAATGAA +
Preference number: 3 (lower is better)
Translates to: GNLTSIGSLHVL*GFLPYLPKSNE
Trigger: TTCATTGCTTTTTGGTAAATAGGGTAAGAATCCTCAAAGAACATGAAGGCTGCCAATAGAAGTTAGGTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR GCA 72 bp TGGAAAGTATTAAAGAGAACTGTCTTATTGACTGAGTaGACTCGTCCTATTGTTCTCAGTCTCAAAATAGCA +
Preference number: 3 (lower is better)
Translates to: WKVLKRTVLLTE*TRPIVLSLKIA
Trigger: TGCTATTTTGAGACTGAGAACAATAGGACGAGTGCACTCAGTCAATAAGACAGTTCTCTTTAATACTTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR-3UTR CAA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAAAAAAGAAAGCTGCTCTaGTGTTCTGTTTTTGTGTAC +
Preference number: 3 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQKRKLL*CSVFVY
Trigger: GTACACAAAAACAGAACACAAGAGCAGCTTTCTTTT...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR TCA 72 bp GTGGAAGTCGATAAACTTCTCGTGAATATACTAATCTaGCAGGCCATTTCAATACTATTTGGTTGTATCAAC +
Preference number: 3 (lower is better)
Translates to: VEVDKLLVNILI*QAISILFGCIN
Trigger: GTTGATACAACCAAATAGTATTGAAATGGCCTGTCAGATTAGTATATTCACGAGAAGTTTATCGACTTCCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CCA 72 bp GAATATACTAATCTGACAGGCCATTTCAATACTATTTaGTTGTATCAACTCTCCTGCATTCTGAATATGGTA +
Preference number: 3 (lower is better)
Translates to: EYTNLTGHFNTI*LYQLSCILNMV
Trigger: TACCATATTCAGAATGCAGGAGAGTTGATACAACCAAATAGTATTGAAATGGCCTGTCAGATTAGTATATTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CAA 72 bp TGCCGTGTGGTGGGAAAGGATGTGCGCGCAACCCCTTaGCCTGAAATGGTAAGCACTGGCACTAATGAGATT +
Preference number: 4 (lower is better)
Translates to: CRVVGKDVRATP*PEMVSTGTNEI
Trigger: AATCTCATTAGTGCCAGTGCTTACCATTTCAGGCAAAGGGGTTGCGCGCACATCCTTTCCCACCACACGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR TCA 90 bp TCACGTACCAGGGATGTAAGGAATGAAAGGCACCTCTTCCCGAATACCACTGTGACGTCAATGTTGCACTaGTTGGCATCTATGCGGCCG +
Preference number: 4 (lower is better)
Translates to: SRTRDVRNERHLFPNTTVTSMLH*LASMRP
Trigger: CGGCCGCATAGATGCCAATCAGTGCAACATTGACGT...CACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR GCA 90 bp CTAGCTCCTCATTTCAGGCTTGCCCTTTTCTGGATCCCTTTTGAAGACCTAGAAGGGAGGGGACAGCCTTaGCTTCAATACCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LAPHFRLALFWIPFEDLEGRGQP*LQYLPL
Trigger: CAGAGGGAGGTATTGAAGGCAAGGCTGTCCCCTCCC...TTCTAGGTCTTCAAAAGGGATCCAGAAAAGGGCAAGCCTGAAATGAGGAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR GCA 90 bp AAGATCCAAGTCCCTACTTCTTCCTTTTATTTATCTGCCGTGTGGTGGGAAAGGGCCACGAGAGCAACCTaGAGCAGGTCAGTGACAAGC +
Preference number: 4 (lower is better)
Translates to: KIQVPTSSFYLSAVWWERATRAT*SRSVTS
Trigger: GCTTGTCACTGACCTGCTGCAGGTTGCTCTCGTGGC...CCTTTCCCACCACACGGCAGATAAATAAAAGGAAGAAGTAGGGACTTGGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CCA 90 bp CTAGCTCCTCATTTCAGGCTTGCCCTTTTCTGGATCCCTTTTGAAGACCTAGAAGCCAGAAGAAAGGAATaGCAGTGGACACCACCCAGG +
Preference number: 4 (lower is better)
Translates to: LAPHFRLALFWIPFEDLEARRKE*QWTPPR
Trigger: CCTGGGTGGTGTCCACTGCCATTCCTTTCTTCTGGC...TTCTAGGTCTTCAAAAGGGATCCAGAAAAGGGCAAGCCTGAAATGAGGAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CCA 90 bp CTAGCTCCTCATTTCAGGCTTGCCCTTTTCTGGATCCCTTTTGAAGACCTAGAACCCACTGGGGTACCCTaGTATCGATATCCACCCACA +
Preference number: 4 (lower is better)
Translates to: LAPHFRLALFWIPFEDLEPTGVP*YRYPPT
Trigger: TGTGGGTGGATATCGATACCAGGGTACCCCAGTGGG...TTCTAGGTCTTCAAAAGGGATCCAGAAAAGGGCAAGCCTGAAATGAGGAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR TCA 90 bp TCACGTACCAGGGATGTAAGGAATGAAAGGCACCTCTTCCCGAATACCACTGTGTTTGCGCTGCTAGCCTaGAATTCAGTGATGACTTCC +
Preference number: 4 (lower is better)
Translates to: SRTRDVRNERHLFPNTTVFALLA*NSVMTS
Trigger: GGAAGTCATCACTGAATTTCAGGCTAGCAGCGCAAA...CACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR GCA 90 bp AAGATCCAAGTCCCTACTTCTTCCTTTTATTTATCTGCCGTGTGGTGGGAAAGGGCTCTGCAGGAAGGCTaGAATCCAGGTGCCATAGAG +
Preference number: 4 (lower is better)
Translates to: KIQVPTSSFYLSAVWWERALQEG*NPGAIE
Trigger: CTCTATGGCACCTGGATTGCAGCCTTCCTGCAGAGC...CCTTTCCCACCACACGGCAGATAAATAAAAGGAAGAAGTAGGGACTTGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR GCA 90 bp AAGATCCAAGTCCCTACTTCTTCCTTTTATTTATCTGCCGTGTGGTGGGAAAGGTTGCTGCCTCCGGGCTaGACCGAACACCACAGAATA +
Preference number: 4 (lower is better)
Translates to: KIQVPTSSFYLSAVWWERLLPPG*TEHHRI
Trigger: TATTCTGTGGTGTTCGGTGCAGCCCGGAGGCAGCAA...CCTTTCCCACCACACGGCAGATAAATAAAAGGAAGAAGTAGGGACTTGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR GCA 90 bp CTAGCTCCTCATTTCAGGCTTGCCCTTTTCTGGATCCCTTTTGAAGACCTAGAAACTGATTGGCATCTATaGGGCCGGTGTCTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LAPHFRLALFWIPFEDLETDWHL*GRCLPL
Trigger: CAAAGGCAGACACCGGCCGCATAGATGCCAATCAGT...TTCTAGGTCTTCAAAAGGGATCCAGAAAAGGGCAAGCCTGAAATGAGGAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CCA 90 bp TCACGTACCAGGGATGTAAGGAATGAAAGGCACCTCTTCCCGAATACCACTGTGGTTGGTCATCTTGGATaGGTAGGAAAGAGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: SRTRDVRNERHLFPNTTVVGHLG*VGKRVD
Trigger: ATCCACCCTCTTTCCTACCCATCCAAGATGACCAAC...CACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR GCA 90 bp AAGATCCAAGTCCCTACTTCTTCCTTTTATTTATCTGCCGTGTGGTGGGAAAGGCATAGAGTGGAGGTGTaGTCTGCAGGAAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: KIQVPTSSFYLSAVWWERHRVEV*SAGRLQ
Trigger: TTGCAGCCTTCCTGCAGAGCACACCTCCACTCTATG...CCTTTCCCACCACACGGCAGATAAATAAAAGGAAGAAGTAGGGACTTGGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CCA 90 bp TCACGTACCAGGGATGTAAGGAATGAAAGGCACCTCTTCCCGAATACCACTGTGATAGCCATAGACATATaGGTGGATGCAACACTGCAG +
Preference number: 4 (lower is better)
Translates to: SRTRDVRNERHLFPNTTVIAIDI*VDATLQ
Trigger: CTGCAGTGTTGCATCCACCCATATGTCTATGGCTAT...CACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR GCA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAATACAGGAGAGCTTGCTaGCTCCGGGCTGCACCGAAC +
Preference number: 4 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQYRRAC*LRAAPN
Trigger: GTTCGGTGCAGCCCGGAGGCAGCAAGCTCTCCTGTA...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CCA 90 bp AAGATCCAAGTCCCTACTTCTTCCTTTTATTTATCTGCCGTGTGGTGGGAAAGGATGGTGATCACCCACTaGGGTACCCTGGTATCGATA +
Preference number: 4 (lower is better)
Translates to: KIQVPTSSFYLSAVWWERMVITH*GTLVSI
Trigger: TATCGATACCAGGGTACCCCAGTGGGTGATCACCAT...CCTTTCCCACCACACGGCAGATAAATAAAAGGAAGAAGTAGGGACTTGGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR GCA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAATTATACAGGAGAGCTTaGTGCCTCCGGGCTGCACCG +
Preference number: 4 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQLYRRA*CLRAAP
Trigger: CGGTGCAGCCCGGAGGCAGCAAGCTCTCCTGTATAA...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR GCA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAAAAGGTGGGTCGCTGGTaGTGTTTCGACGACTGGGTG +
Preference number: 4 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQKVGRW*CFDDWV
Trigger: CACCCAGTCGTCGAAACAGCACCAGCGACCCACCTT...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CCA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAAGCCCCAGCCATAGAGTaGAGGTGTGCTCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQAPAIE*RCALQE
Trigger: TTCCTGCAGAGCACACCTCCACTCTATGGCTGGGGC...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CCA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAATGCCCTCGGCTACCATaGGACTCTCTTCCATGGAGC +
Preference number: 4 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQCPRLP*DSLPWS
Trigger: GCTCCATGGAAGAGAGTCCCATGGTAGCCGAGGGCA...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CCA 90 bp TGGAAACCTAACTTCTATTGGCAGCCTTCATGTTCTTTGAGGATTCTTACCCTAGAAGTAGCTGAATCATaGGAGGGGACAGCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: WKPNFYWQPSCSLRILTLEVAES*EGTALP
Trigger: AGGCAAGGCTGTCCCCTCCCATGATTCAGCTACTTC...TAGGGTAAGAATCCTCAAAGAACATGAAGGCTGCCAATAGAAGTTAGGTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CAA 72 bp CGTAATCCACCTTTGTTGCAGCTTGCAGTACAGTCTTaGCACCATACTGTGGTACTCTCTGGTACAGAAATC +
Preference number: 4 (lower is better)
Translates to: RNPPLLQLAVQS*HHTVVLSGTEI
Trigger: GATTTCTGTACCAGAGAGTACCACAGTATGGTGCAAAGACTGTACTGCAAGCTGCAACAAAGGTGGATTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR GCA 90 bp TGGAAACCTAACTTCTATTGGCAGCCTTCATGTTCTTTGAGGATTCTTACCCTACCCTCTTCATTCTCATaGACCACAGAGTCCTCGACT +
Preference number: 4 (lower is better)
Translates to: WKPNFYWQPSCSLRILTLPSSFS*TTESST
Trigger: AGTCGAGGACTCTGTGGTGCATGAGAATGAAGAGGG...TAGGGTAAGAATCCTCAAAGAACATGAAGGCTGCCAATAGAAGTTAGGTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CAA 72 bp GCTTTCTTTACAGTCTATCTGCGTAATCCACCTTTGTaGCAGCTTGCAGTACAGTCTTTGCACCATACTGTG +
Preference number: 4 (lower is better)
Translates to: AFFTVYLRNPPL*QLAVQSLHHTV
Trigger: CACAGTATGGTGCAAAGACTGTACTGCAAGCTGCAACAAAGGTGGATTACGCAGATAGACTGTAAAGAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CAA 72 bp ACATCTATTCCCAGCTGTACCAGAATAAGTTCTTGCTaGTCACGTACCAGGGATGTAAGGAATGAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: TSIPSCTRISSC*SRTRDVRNERH
Trigger: GTGCCTTTCATTCCTTACATCCCTGGTACGTGACAAGCAAGAACTTATTCTGGTACAGCTGGGAATAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
3UTR CAA 72 bp ATGTTAATCTCTCTTCATTCCCCAAGCAGGAGTCTGTaGTTCCTGTCTGGCACTAAAGGTATCACAACCAGT +
Preference number: 4 (lower is better)
Translates to: MLISLHSPSRSL*FLSGTKGITTS
Trigger: ACTGGTTGTGATACCTTTAGTGCCAGACAGGAACAACAGACTCCTGCTTGGGGAATGAAGAGAGATTAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR TCA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAAGAGCGGATGATGCCGTaGGCTACACTAATAGGCATC +
Preference number: 4 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQERMMP*ATLIGI
Trigger: GATGCCTATTAGTGTAGCTCACGGCATCATCCGCTC...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR TCA 90 bp ACATCACTCATTTTACTGATGACACTAGCCACAAACACACACAATCTAATCTCTGCCAGATTATTATGGTaGTCACCCACTGGGGTACCC +
Preference number: 4 (lower is better)
Translates to: TSLILLMTLATNTHNLISARLLW*SPTGVP
Trigger: GGGTACCCCAGTGGGTGATCACCATAATAATCTGGC...AGAGATTAGATTGTGTGTGTTTGTGGCTAGTGTCATCAGTAAAATGAGTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CCA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAACCTCCATCTTGGCCCTaGAACTCATTCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQPPSWP*NSFLSW
Trigger: CCAGGACAAGAATGAGTTCCAGGGCCAAGATGGAGG...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR TCA 90 bp TGGAAACCTAACTTCTATTGGCAGCCTTCATGTTCTTTGAGGATTCTTACCCTACAGGTAACGATCAACTaGCACCACCACAATGGTATT +
Preference number: 4 (lower is better)
Translates to: WKPNFYWQPSCSLRILTLQVTIN*HHHNGI
Trigger: AATACCATTGTGGTGGTGTCAGTTGATCGTTACCTG...TAGGGTAAGAATCCTCAAAGAACATGAAGGCTGCCAATAGAAGTTAGGTTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR GCA 90 bp TGGAAACCTAACTTCTATTGGCAGCCTTCATGTTCTTTGAGGATTCTTACCCTAAGGCTGCAATCCAGGTaGCATAGAGGAGAATATAAC +
Preference number: 4 (lower is better)
Translates to: WKPNFYWQPSCSLRILTLRLQSR*HRGEYN
Trigger: GTTATATTCTCCTCTATGGCACCTGGATTGCAGCCT...TAGGGTAAGAATCCTCAAAGAACATGAAGGCTGCCAATAGAAGTTAGGTTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CCA 90 bp ACATCACTCATTTTACTGATGACACTAGCCACAAACACACACAATCTAATCTCTTGGCTCCCCAGATCATaGAACAGAAGGCATTACGGT +
Preference number: 4 (lower is better)
Translates to: TSLILLMTLATNTHNLISWLPRS*NRRHYG
Trigger: ACCGTAATGCCTTCTGTTCCATGATCTGGGGAGCCA...AGAGATTAGATTGTGTGTGTTTGTGGCTAGTGTCATCAGTAAAATGAGTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CCA 90 bp AAGATCCAAGTCCCTACTTCTTCCTTTTATTTATCTGCCGTGTGGTGGGAAAGGAATCATAACACCCAGTaGAATAACGAGGAAGGATAC +
Preference number: 4 (lower is better)
Translates to: KIQVPTSSFYLSAVWWERNHNTQ*NNEEGY
Trigger: GTATCCTTCCTCGTTATTCCACTGGGTGTTATGATT...CCTTTCCCACCACACGGCAGATAAATAAAAGGAAGAAGTAGGGACTTGGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR TCA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAAAGGAAAGAGGGTGGATaGTGGTCAGGTAACGATCAA +
Preference number: 4 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQRKEGG*WSGNDQ
Trigger: TTGATCGTTACCTGACCATCATCCACCCTCTTTCCT...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 90 bp CATGCACCACAGAGTCCTCGACTCTCACCTCCAAGCGGTGGCTCTTaGCCTTATACAGGAGAGCTTGCTGCCTCCGGGCTGCACCGAACA +
Preference number: 5 (lower is better)
Translates to: HAPQSPRLSPPSGGS*PYTGELAASGLHRT
Trigger: TGTTCGGTGCAGCCCGGAGGCAGCAAGCTCTCCTGTATAAGGCCAAGAGCCACCGCTTGGAGGTGAGAGTCGAGGACTCTGTGGTGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 90 bp TCATTCTCATGCACCACAGAGTCCTCGACTCTCACCTCCAAGCGGTaGCTCTTGGCCTTATACAGGAGAGCTTGCTGCCTCCGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: SFSCTTESSTLTSKR*LLALYRRACCLRAA
Trigger: TGCAGCCCGGAGGCAGCAAGCTCTCCTGTATAAGGCCAAGAGCCACCGCTTGGAGGTGAGAGTCGAGGACTCTGTGGTGCATGAGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 90 bp GCATGGAGGCAAAGGTGGGTCGCTGGTGCTGTTTCGACGACTGGGTaGACTGCTCTCTGGAATGCGCATCGCCTCAACATCGTCGTTGAA +
Preference number: 5 (lower is better)
Translates to: AWRQRWVAGAVSTTG*TALWNAHRLNIVVE
Trigger: TTCAACGACGATGTTGAGGCGATGCGCATTCCAGAGAGCAGTCCACCCAGTCGTCGAAACAGCACCAGCGACCCACCTTTGCCTCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS TCA 90 bp GCTACACCAAGGATGACGAGCAGCACAACTGAGCGGATGATGCCGTaGGCTACACTAATAGGCATCTTGGAGAGGGGGAGGCACACTCGA +
Preference number: 5 (lower is better)
Translates to: ATPRMTSSTTERMMP*ATLIGILERGRHTR
Trigger: TCGAGTGTGCCTCCCCCTCTCCAAGATGCCTATTAGTGTAGCTCACGGCATCATCCGCTCAGTTGTGCTGCTCGTCATCCTTGGTGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS GCA 90 bp AAAGGAATGGCAGTGGACACCACCCAGGGGGCCACGAGAGCAACCTaGAGCAGGTCAGTGACAAGCAGGTTAAATATGAACCGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: KGMAVDTTQGATRAT*SRSVTSRLNMNRLV
Trigger: GACCAACCGGTTCATATTTAACCTGCTTGTCACTGACCTGCTGCAGGTTGCTCTCGTGGCCCCCTGGGTGGTGTCCACTGCCATTCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS GCA 90 bp AGCGTGGCCCCAGCCATAGAGTGGAGGTGTGCTCTGCAGGAAGGCTaGAATCCAGGTGCCATAGAGGAGAATATAACTACGTCGGTTGGT +
Preference number: 5 (lower is better)
Translates to: SVAPAIEWRCALQEG*NPGAIEENITTSVG
Trigger: ACCAACCGACGTAGTTATATTCTCCTCTATGGCACCTGGATTGCAGCCTTCCTGCAGAGCACACCTCCACTCTATGGCTGGGGCCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS GCA 90 bp GCTGCCATTACTGACCTCGTCACTGTCCTTGCCCTCCATGATACCTaGACTGAAATCCAGGCTTCCTTTTCCGGTCTTCTGGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: AAITDLVTVLALHDT*TEIQASFSGLLAAA
Trigger: GGCAGCAGCCAGAAGACCGGAAAAGGAAGCCTGGATTTCAGTGCAGGTATCATGGAGGGCAAGGACAGTGACGAGGTCAGTAATGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 90 bp TCCATGATACCTGCACTGAAATCCAGGCTTCCTTTTCCGGTCTTCTaGCTGCTGCCCTCGGCTACCATGGGACTCTCTTCCATGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SMIPALKSRLPFPVF*LLPSATMGLSSMEL
Trigger: CAGCTCCATGGAAGAGAGTCCCATGGTAGCCGAGGGCAGCAGCCAGAAGACCGGAAAAGGAAGCCTGGATTTCAGTGCAGGTATCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 90 bp GAAGATCACTCTAGCAGCTTTGCACTCATAGCATGGAGGCAAAGGTaGGTCGCTGGTGCTGTTTCGACGACTGGGTGGACTGCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: EDHSSSFALIAWRQR*VAGAVSTTGWTALW
Trigger: CCAGAGAGCAGTCCACCCAGTCGTCGAAACAGCACCAGCGACCCACCTTTGCCTCCATGCTATGAGTGCAAAGCTGCTAGAGTGATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 90 bp AGGTGGGTCGCTGGTGCTGTTTCGACGACTGGGTGGACTGCTCTCTaGAATGCGCATCGCCTCAACATCGTCGTTGAAATGAATTTCATC +
Preference number: 5 (lower is better)
Translates to: RWVAGAVSTTGWTAL*NAHRLNIVVEMNFI
Trigger: GATGAAATTCATTTCAACGACGATGTTGAGGCGATGCGCATTCCAGAGAGCAGTCCACCCAGTCGTCGAAACAGCACCAGCGACCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 90 bp GGAAATGATGACGAAGATCACTCTAGCAGCTTTGCACTCATAGCATaGAGGCAAAGGTGGGTCGCTGGTGCTGTTTCGACGACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: GNDDEDHSSSFALIA*RQRWVAGAVSTTGW
Trigger: CCACCCAGTCGTCGAAACAGCACCAGCGACCCACCTTTGCCTCCATGCTATGAGTGCAAAGCTGCTAGAGTGATCTTCGTCATCATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CAA 90 bp CTAGCTCCTCATTTCAGGCTTGCCCTTTTCTGGATCCCTTTTGAAGACCTAGAACTTATACAGGAGAGCTaGCTGCCTCCGGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: LAPHFRLALFWIPFEDLELIQES*LPPGCT
Trigger: GGTGCAGCCCGGAGGCAGCAAGCTCTCCTGTATAAG...TTCTAGGTCTTCAAAAGGGATCCAGAAAAGGGCAAGCCTGAAATGAGGAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS TCA 90 bp TACGTTACCCAGAAAGGCTACACCAAGGATGACGAGCAGCACAACTaGGCGGATGATGCCGTGAGCTACACTAATAGGCATCTTGGAGAG +
Preference number: 5 (lower is better)
Translates to: YVTQKGYTKDDEQHN*ADDAVSYTNRHLGE
Trigger: CTCTCCAAGATGCCTATTAGTGTAGCTCACGGCATCATCCGCTCAGTTGTGCTGCTCGTCATCCTTGGTGTAGCCTTTCTGGGTAACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 90 bp GGCTGCACCGAACACCACAGAATAGCAGGCAATCATAACACCCAGTaGAATAACGAGGAAGGATACCACACTGACAACCGTATAGGCAGG +
Preference number: 5 (lower is better)
Translates to: GCTEHHRIAGNHNTQ*NNEEGYHTDNRIGR
Trigger: CCTGCCTATACGGTTGTCAGTGTGGTATCCTTCCTCGTTATTCCACTGGGTGTTATGATTGCCTGCTATTCTGTGGTGTTCGGTGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CAA 90 bp TCACGTACCAGGGATGTAAGGAATGAAAGGCACCTCTTCCCGAATACCACTGTGACACTAATAGGCATCTaGGAGAGGGGGAGGCACACT +
Preference number: 5 (lower is better)
Translates to: SRTRDVRNERHLFPNTTVTLIGI*ERGRHT
Trigger: AGTGTGCCTCCCCCTCTCCAAGATGCCTATTAGTGT...CACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CAA 90 bp CTAGCTCCTCATTTCAGGCTTGCCCTTTTCTGGATCCCTTTTGAAGACCTAGAACCCTGGAACTCATTCTaGTCCTGGAACTCATCCCTC +
Preference number: 5 (lower is better)
Translates to: LAPHFRLALFWIPFEDLEPWNSF*SWNSSL
Trigger: GAGGGATGAGTTCCAGGACAAGAATGAGTTCCAGGG...TTCTAGGTCTTCAAAAGGGATCCAGAAAAGGGCAAGCCTGAAATGAGGAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 90 bp GACAAGCAGGTTAAATATGAACCGGTTGGTCACCTGCAGCAAGTTTaGCTTACGGTGCAATACATAACCCAGCACTACGTTACCCAGAAA +
Preference number: 5 (lower is better)
Translates to: DKQVKYEPVGHLQQV*LTVQYITQHYVTQK
Trigger: TTTCTGGGTAACGTAGTGCTGGGTTATGTATTGCACCGTAAGCCAAACTTGCTGCAGGTGACCAACCGGTTCATATTTAACCTGCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CAA 90 bp TCACGTACCAGGGATGTAAGGAATGAAAGGCACCTCTTCCCGAATACCACTGTGTTAAATATGAACCGGTaGGTCACCTGCAGCAAGTTT +
Preference number: 5 (lower is better)
Translates to: SRTRDVRNERHLFPNTTVLNMNR*VTCSKF
Trigger: AAACTTGCTGCAGGTGACCAACCGGTTCATATTTAA...CACAGTGGTATTCGGGAAGAGGTGCCTTTCATTCCTTACATCCCTGGTACGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CAA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAATGGGAGGGGACAGCCTaGCCTTCAATACCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQWEGTA*PSIPPS
Trigger: AGAGGGAGGTATTGAAGGCAAGGCTGTCCCCTCCCA...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS-3UTR CAA 90 bp GTAGAAGAAATACCACAAGAGAACACATCACTGACACAAGACAAAAGTACTCAACTGACCACCTCCATCTaGGCCCTGGAACTCATTCTT +
Preference number: 5 (lower is better)
Translates to: VEEIPQENTSLTQDKSTQLTTSI*ALELIL
Trigger: AAGAATGAGTTCCAGGGCCAAGATGGAGGTGGTCAG...TTGAGTACTTTTGTCTTGTGTCAGTGATGTGTTCTCTTGTGGTATTTCTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS TCA 90 bp TTTTCTTACAGATTAACTTCTTCAGTACCTCCTGGATTTCCTTCTTaGTGCTCTTGTGCATATAGCCATAGACATATGGGTGGATGCAAC +
Preference number: 5 (lower is better)
Translates to: FSYRLTSSVPPGFPS*CSCAYSHRHMGGCN
Trigger: GTTGCATCCACCCATATGTCTATGGCTATATGCACAAGAGCATCAAGAAGGAAATCCAGGAGGTACTGAAGAAGTTAATCTGTAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 72 bp CAGAGTCCTCGACTCTCACCTCCAAGCGGTGGCTCTTaGCCTTATACAGGAGAGCTTGCTGCCTCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: QSPRLSPPSGGS*PYTGELAASGL
Trigger: CAGCCCGGAGGCAGCAAGCTCTCCTGTATAAGGCCAAGAGCCACCGCTTGGAGGTGAGAGTCGAGGACTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CAA 90 bp TCATGCACCACAGAGTCCTCGACTCTCACCTCCAAGCGGTGGCTCTaGGCCTTATACAGGAGAGCTTGCTGCCTCCGGGCTGCACCGAAC +
Preference number: 6 (lower is better)
Translates to: SCTTESSTLTSKRWL*ALYRRACCLRAAPN
Trigger: GTTCGGTGCAGCCCGGAGGCAGCAAGCTCTCCTGTATAAGGCCAAGAGCCACCGCTTGGAGGTGAGAGTCGAGGACTCTGTGGTGCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS GCA 72 bp GTGGGTCGCTGGTGCTGTTTCGACGACTGGGTGGACTaGTCTCTGGAATGCGCATCGCCTCAACATCGTCGT +
Preference number: 6 (lower is better)
Translates to: VGRWCCFDDWVD*SLECASPQHRR
Trigger: ACGACGATGTTGAGGCGATGCGCATTCCAGAGAGCAGTCCACCCAGTCGTCGAAACAGCACCAGCGACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CAA 72 bp ACAGAGTCCTCGACTCTCACCTCCAAGCGGTGGCTCTaGGCCTTATACAGGAGAGCTTGCTGCCTCCGGGCT +
Preference number: 6 (lower is better)
Translates to: TESSTLTSKRWL*ALYRRACCLRA
Trigger: AGCCCGGAGGCAGCAAGCTCTCCTGTATAAGGCCAAGAGCCACCGCTTGGAGGTGAGAGTCGAGGACTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CAA 90 bp GACTCTCACCTCCAAGCGGTGGCTCTTGGCCTTATACAGGAGAGCTaGCTGCCTCCGGGCTGCACCGAACACCACAGAATAGCAGGCAAT +
Preference number: 6 (lower is better)
Translates to: DSHLQAVALGLIQES*LPPGCTEHHRIAGN
Trigger: ATTGCCTGCTATTCTGTGGTGTTCGGTGCAGCCCGGAGGCAGCAAGCTCTCCTGTATAAGGCCAAGAGCCACCGCTTGGAGGTGAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 72 bp CCTGCACTGAAATCCAGGCTTCCTTTTCCGGTCTTCTaGCTGCTGCCCTCGGCTACCATGGGACTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: PALKSRLPFPVF*LLPSATMGLSS
Trigger: GGAAGAGAGTCCCATGGTAGCCGAGGGCAGCAGCCAGAAGACCGGAAAAGGAAGCCTGGATTTCAGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 72 bp CAAAGGTGGGTCGCTGGTGCTGTTTCGACGACTGGGTaGACTGCTCTCTGGAATGCGCATCGCCTCAACATC +
Preference number: 6 (lower is better)
Translates to: QRWVAGAVSTTG*TALWNAHRLNI
Trigger: GATGTTGAGGCGATGCGCATTCCAGAGAGCAGTCCACCCAGTCGTCGAAACAGCACCAGCGACCCACCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CAA 72 bp CTCCAAGCGGTGGCTCTTGGCCTTATACAGGAGAGCTaGCTGCCTCCGGGCTGCACCGAACACCACAGAATA +
Preference number: 6 (lower is better)
Translates to: LQAVALGLIQES*LPPGCTEHHRI
Trigger: TATTCTGTGGTGTTCGGTGCAGCCCGGAGGCAGCAAGCTCTCCTGTATAAGGCCAAGAGCCACCGCTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS TCA 72 bp CTCTCTTCCATGGAGCTGCTTCCCTTAGCCTCGGCCTaGCCACCTCCATCTTGGCCCTGGAACTCATTCTTG +
Preference number: 6 (lower is better)
Translates to: LSSMELLPLASA*PPPSWPWNSFL
Trigger: CAAGAATGAGTTCCAGGGCCAAGATGGAGGTGGTCAGGCCGAGGCTAAGGGAAGCAGCTCCATGGAAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS TCA 72 bp TCTATGCGGCCGGTGTCTGCCTTTGCGCTGCTAGCCTaGAATTCAGTGATGACTTCCAGCCCCTCCATGCTG +
Preference number: 6 (lower is better)
Translates to: SMRPVSAFALLA*NSVMTSSPSML
Trigger: CAGCATGGAGGGGCTGGAAGTCATCACTGAATTTCAGGCTAGCAGCGCAAAGGCAGACACCGGCCGCATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS GCA 72 bp GCAGTGGACACCACCCAGGGGGCCACGAGAGCAACCTaGAGCAGGTCAGTGACAAGCAGGTTAAATATGAAC +
Preference number: 6 (lower is better)
Translates to: AVDTTQGATRAT*SRSVTSRLNMN
Trigger: GTTCATATTTAACCTGCTTGTCACTGACCTGCTGCAGGTTGCTCTCGTGGCCCCCTGGGTGGTGTCCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS GCA 72 bp TGCACTCATAGCATGGAGGCAAAGGTGGGTCGCTGGTaGTGTTTCGACGACTGGGTGGACTGCTCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: CTHSMEAKVGRW*CFDDWVDCSLE
Trigger: TTCCAGAGAGCAGTCCACCCAGTCGTCGAAACAGCACCAGCGACCCACCTTTGCCTCCATGCTATGAGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS TCA 72 bp AGGATGACGAGCAGCACAACTGAGCGGATGATGCCGTaGGCTACACTAATAGGCATCTTGGAGAGGGGGAGG +
Preference number: 6 (lower is better)
Translates to: RMTSSTTERMMP*ATLIGILERGR
Trigger: CCTCCCCCTCTCCAAGATGCCTATTAGTGTAGCTCACGGCATCATCCGCTCAGTTGTGCTGCTCGTCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 72 bp GCTGGTGCTGTTTCGACGACTGGGTGGACTGCTCTCTaGAATGCGCATCGCCTCAACATCGTCGTTGAAATG +
Preference number: 6 (lower is better)
Translates to: AGAVSTTGWTAL*NAHRLNIVVEM
Trigger: CATTTCAACGACGATGTTGAGGCGATGCGCATTCCAGAGAGCAGTCCACCCAGTCGTCGAAACAGCACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 72 bp TCTAGCAGCTTTGCACTCATAGCATGGAGGCAAAGGTaGGTCGCTGGTGCTGTTTCGACGACTGGGTGGACT +
Preference number: 6 (lower is better)
Translates to: SSSFALIAWRQR*VAGAVSTTGWT
Trigger: AGTCCACCCAGTCGTCGAAACAGCACCAGCGACCCACCTTTGCCTCCATGCTATGAGTGCAAAGCTGCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CAA 90 bp TTCCATGGAGCTGCTTCCCTTAGCCTCGGCCTGACCACCTCCATCTaGGCCCTGGAACTCATTCTTGTCCTGGAACTCATCCCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: FHGAASLSLGLTTSI*ALELILVLELIPLL
Trigger: AAGAAGAGGGATGAGTTCCAGGACAAGAATGAGTTCCAGGGCCAAGATGGAGGTGGTCAGGCCGAGGCTAAGGGAAGCAGCTCCATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CAA 90 bp ACTTCCAGCCCCTCCATGCTGCCATTACTGACCTCGTCACTGTCCTaGCCCTCCATGATACCTGCACTGAAATCCAGGCTTCCTTTTCCG +
Preference number: 6 (lower is better)
Translates to: TSSPSMLPLLTSSLS*PSMIPALKSRLPFP
Trigger: CGGAAAAGGAAGCCTGGATTTCAGTGCAGGTATCATGGAGGGCAAGGACAGTGACGAGGTCAGTAATGGCAGCATGGAGGGGCTGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 72 bp GACGAAGATCACTCTAGCAGCTTTGCACTCATAGCATaGAGGCAAAGGTGGGTCGCTGGTGCTGTTTCGACG +
Preference number: 6 (lower is better)
Translates to: DEDHSSSFALIA*RQRWVAGAVST
Trigger: CGTCGAAACAGCACCAGCGACCCACCTTTGCCTCCATGCTATGAGTGCAAAGCTGCTAGAGTGATCTTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CAA 72 bp CCCTCCATGCTGCCATTACTGACCTCGTCACTGTCCTaGCCCTCCATGATACCTGCACTGAAATCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: PSMLPLLTSSLS*PSMIPALKSRL
Trigger: AAGCCTGGATTTCAGTGCAGGTATCATGGAGGGCAAGGACAGTGACGAGGTCAGTAATGGCAGCATGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS TCA 72 bp AACTCTACATCATCTTCGCCCACGTCAATGTTGCACTaGTTGGCATCTATGCGGCCGGTGTCTGCCTTTGCG +
Preference number: 6 (lower is better)
Translates to: NSTSSSPTSMLH*LASMRPVSAFA
Trigger: CGCAAAGGCAGACACCGGCCGCATAGATGCCAATCAGTGCAACATTGACGTGGGCGAAGATGATGTAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS GCA 72 bp ACTGACCTCGTCACTGTCCTTGCCCTCCATGATACCTaGACTGAAATCCAGGCTTCCTTTTCCGGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: TDLVTVLALHDT*TEIQASFSGLL
Trigger: CAGAAGACCGGAAAAGGAAGCCTGGATTTCAGTGCAGGTATCATGGAGGGCAAGGACAGTGACGAGGTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS GCA 72 bp TGCCAAACTCTACATCATCTTCGCCCACGTCAATGTTaGACTGATTGGCATCTATGCGGCCGGTGTCTGCCT +
Preference number: 6 (lower is better)
Translates to: CQTLHHLRPRQC*TDWHLCGRCLP
Trigger: AGGCAGACACCGGCCGCATAGATGCCAATCAGTGCAACATTGACGTGGGCGAAGATGATGTAGAGTTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS TCA 72 bp GGTTGGTCATCTTGGATGGGTAGGAAAGAGGGTGGATaGTGGTCAGGTAACGATCAACTGACACCACCACAA +
Preference number: 6 (lower is better)
Translates to: GWSSWMGRKEGG*WSGNDQLTPPQ
Trigger: TTGTGGTGGTGTCAGTTGATCGTTACCTGACCATCATCCACCCTCTTTCCTACCCATCCAAGATGACCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 72 bp GAGGAGAATATAACTACGTCGGTTGGTCATCTTGGATaGGTAGGAAAGAGGGTGGATGATGGTCAGGTAACG +
Preference number: 6 (lower is better)
Translates to: EENITTSVGHLG*VGKRVDDGQVT
Trigger: CGTTACCTGACCATCATCCACCCTCTTTCCTACCCATCCAAGATGACCAACCGACGTAGTTATATTCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CAA 72 bp AGCAGGTCAGTGACAAGCAGGTTAAATATGAACCGGTaGGTCACCTGCAGCAAGTTTGGCTTACGGTGCAAT +
Preference number: 6 (lower is better)
Translates to: SRSVTSRLNMNR*VTCSKFGLRCN
Trigger: ATTGCACCGTAAGCCAAACTTGCTGCAGGTGACCAACCGGTTCATATTTAACCTGCTTGTCACTGACCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 72 bp GAACACCACAGAATAGCAGGCAATCATAACACCCAGTaGAATAACGAGGAAGGATACCACACTGACAACCGT +
Preference number: 6 (lower is better)
Translates to: EHHRIAGNHNTQ*NNEEGYHTDNR
Trigger: ACGGTTGTCAGTGTGGTATCCTTCCTCGTTATTCCACTGGGTGTTATGATTGCCTGCTATTCTGTGGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS CCA 72 bp GTTAAATATGAACCGGTTGGTCACCTGCAGCAAGTTTaGCTTACGGTGCAATACATAACCCAGCACTACGTT +
Preference number: 6 (lower is better)
Translates to: VKYEPVGHLQQV*LTVQYITQHYV
Trigger: AACGTAGTGCTGGGTTATGTATTGCACCGTAAGCCAAACTTGCTGCAGGTGACCAACCGGTTCATATTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6
CDS TCA 72 bp TGCTCTCTGGAATGCGCATCGCCTCAACATCGTCGTTaGAATGAATTTCATCCATGCCAAACTCTACATCAT +
Preference number: 6 (lower is better)
Translates to: CSLECASPQHRR*NEFHPCQTLHH
Trigger: ATGATGTAGAGTTTGGCATGGATGAAATTCATTTCAACGACGATGTTGAGGCGATGCGCATTCCAGAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057645.6