Pregenerated sensors for GPNMB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029816Ensembl transcript IDs: ENSMUST00000031840.10, ENSMUST00000203757.2, ENSMUST00000204260.2
Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TTGGGATGCCTGTGCCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTaGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCCTG | + |
Preference number: 1 (lower is better) Translates to: LGCLCPGLLQLLWAP*LWGCPAGTGCSAAL Trigger: CAGGGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR CCA 90 bp | AGGCTGCTGTTGGGATGCCTGTGCCCAGGACTCCTTCAGTTGCTCTaGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCA | + |
Preference number: 1 (lower is better) Translates to: RLLLGCLCPGLLQLL*APWLWGCPAGTGCS Trigger: TGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR GCA 90 bp | ATACAAGGCTGCTGTTGGGATGCCTGTGCCCAGGACTCCTTCAGTTaGTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGT | + |
Preference number: 1 (lower is better) Translates to: IQGCCWDACAQDSFS*SGLLGCGAVPQAQG Trigger: ACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAGCCTTGTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR GCA 90 bp | ATGTCAGGGCTCGGTTCAGATACAAGGCTGCTGTTGGGATGCCTGTaGCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTGGGGC | + |
Preference number: 1 (lower is better) Translates to: MSGLGSDTRLLLGCL*PGLLQLLWAPWLWG Trigger: GCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAGCCTTGTATCTGAACCGAGCCCTGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR TCA 90 bp | GCTTTGGTGGCTGTTCTGTATCTGCTGTTCTCTGCTGCCCCCTGTTaGCCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCT | + |
Preference number: 1 (lower is better) Translates to: ALVAVLYLLFSAAPC*PEQGSDPKPSLAHS Trigger: AGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGGGGGCAGCAGAGAACAGCAGATACAGAACAGCCACCAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR TCA 90 bp | GCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTAGCGGCCATGTaGAGTGAGTCAGAGAGGGACAGCATACCCCTTCTACAGCTGAGA | + |
Preference number: 1 (lower is better) Translates to: AVPALILPSGAVAAM*SESERDSIPLLQLR Trigger: TCTCAGCTGTAGAAGGGGTATGCTGTCCCTCTCTGACTCACTTCACATGGCCGCTACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR TCA 90 bp | TTTTCATCCGAAGACCAGCCACGTAATTGGTTGTGCTCTCTCATGTaGTCGGGATACTGTTCATGGCCCAGCACATCACGAAATCCGCGG | + |
Preference number: 1 (lower is better) Translates to: FSSEDQPRNWLCSLM*SGYCSWPSTSRNPR Trigger: CCGCGGATTTCGTGATGTGCTGGGCCATGAACAGTATCCCGATCACATGAGAGAGCACAACCAATTACGTGGCTGGTCTTCGGATGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203757.2 |
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3UTR GCA 90 bp | ATAAACAAAGTCATGGACCTGCCGCTTTGGTGGCTGTTCTGTATCTaGTGTTCTCTGCTGCCCCCTGTTGACCTGAGCAAGGAAGTGATC | + |
Preference number: 1 (lower is better) Translates to: INKVMDLPLWWLFCI*CSLLPPVDLSKEVI Trigger: GATCACTTCCTTGCTCAGGTCAACAGGGGGCAGCAGAGAACAGCAGATACAGAACAGCCACCAAAGCGGCAGGTCCATGACTTTGTTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR TCA 90 bp | TTGAGTTCCCGTCCCTTCTTCTTCAGTTCCATTTCCCCGTGGGTATaGAGTTGGTCTTTCTTGCCATGTTTGCCATCTGTCCTGCATTTC | + |
Preference number: 1 (lower is better) Translates to: LSSRPFFFSSISPWV*SWSFLPCLPSVLHF Trigger: GAAATGCAGGACAGATGGCAAACATGGCAAGAAAGACCAACTTCATACCCACGGGGAAATGGAACTGAAGAAGAAGGGACGGGAACTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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3UTR CCA 90 bp | CAGCAGAATAAGGATTCTCTGTTGGTTTCTCAGAAATCCAAATTATaGGGTCCCACCTCCACAAGACAGTGTTTGGAACCATGGGGTGGA | + |
Preference number: 1 (lower is better) Translates to: QQNKDSLLVSQKSKL*GPTSTRQCLEPWGG Trigger: TCCACCCCATGGTTCCAAACACTGTCTTGTGGAGGTGGGACCCCATAATTTGGATTTCTGAGAAACCAACAGAGAATCCTTATTCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR CCA 90 bp | TCTCATAGGTCAAGTGCAGCCCACCACATGCTTTATAAGTGTCCATaGATAAATGAATGGATGGGTAGTTCACTGAACTACACAGGGAAA | + |
Preference number: 1 (lower is better) Translates to: SHRSSAAHHMLYKCP*INEWMGSSLNYTGK Trigger: TTTCCCTGTGTAGTTCAGTGAACTACCCATCCATTCATTTATCCATGGACACTTATAAAGCATGTGGTGGGCTGCACTTGACCTATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR GCA 90 bp | ACATCAATCAAGCCATCCCTGTCTCTTAGGCTATTTCTTCCATTCTaGAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATAAATCGA | + |
Preference number: 1 (lower is better) Translates to: TSIKPSLSLRLFLPF*RQFPYQGHLENINR Trigger: TCGATTTATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCCTAAGAGACAGGGATGGCTTGATTGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR TCA 90 bp | GTTGGTCTTTCTTGCCATGTTTGCCATCTGTCCTGCATTTCTACATaGTCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCAAGAA | + |
Preference number: 1 (lower is better) Translates to: VGLSCHVCHLSCIST*SSQRCILTCICCQE Trigger: TTCTTGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAGGACAGATGGCAAACATGGCAAGAAAGACCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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3UTR CCA 90 bp | ATCATATTTATCCAGTTGTCTACCTTCATCAAGGTAGATACAGTCTaGACTCTCAGATCTCACTTGGTTGCTATTAAGGGTCTGCTGGTA | + |
Preference number: 1 (lower is better) Translates to: IIFIQLSTFIKVDTV*TLRSHLVAIKGLLV Trigger: TACCAGCAGACCCTTAATAGCAACCAAGTGAGATCTGAGAGTCCAGACTGTATCTACCTTGATGAAGGTAGACAACTGGATAAATATGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR GCA 90 bp | TACAGATGGGAAGAAACACTAAGTCTTCCCATGTCTTCTCTAAAATaGTATTTAACCACACTCCCTAAGCCACGATATACATTTTACAAT | + |
Preference number: 1 (lower is better) Translates to: YRWEETLSLPMSSLK*YLTTLPKPRYTFYN Trigger: ATTGTAAAATGTATATCGTGGCTTAGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTCTTCCCATCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR TCA 90 bp | AAGGAAATCAATATAGTTTACATTGCCAGCTGTAGAAACAGGCTCTaGCAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGAC | + |
Preference number: 1 (lower is better) Translates to: KEINIVYIASCRNRL*QMASLSNFIVQMSD Trigger: GTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTGTTTCTACAGCTGGCAATGTAAACTATATTGATTTCCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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3UTR CAA 90 bp | GTTGGGATGCCTGTGCCCAGGACTCCTTCAGTTGCTCTGGGCTCCTaGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCCT | + |
Preference number: 2 (lower is better) Translates to: VGMPVPRTPSVALGS*AVGLSRRHRVFSSP Trigger: AGGGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR TCA 90 bp | TCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCCATGGCCTTCAGGTGGTaGTTAGCTGGGTTCATGCCC | + |
Preference number: 2 (lower is better) Translates to: SGLLGCGAVPQAQGVQQPMAFRW*LAGFMP Trigger: GGGCATGAACCCAGCTAATCACCACCTGAAGGCCAT...GGGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR TCA 90 bp | GCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCGAGTTGGAAGGCAGATaGAGCATGGCCTTCAGGTGG | + |
Preference number: 2 (lower is better) Translates to: ALGSLAVGLSRRHRVFSSELEGR*SMAFRW Trigger: CCACCTGAAGGCCATGCTTCATCTGCCTTCCAACTC...GCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR TCA 90 bp | GCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCTCAGGCATGCTCAGTaGGTTGGAAGGCAGATGAAG | + |
Preference number: 2 (lower is better) Translates to: ALGSLAVGLSRRHRVFSSLRHAQ*VGRQMK Trigger: CTTCATCTGCCTTCCAACTCACTGAGCATGCCTGAG...GCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CCA 90 bp | TCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCCCATGCCCATGTTATGTaGAAAGCTGAGGCATCTGTG | + |
Preference number: 2 (lower is better) Translates to: SGLLGCGAVPQAQGVQQPHAHVM*KAEASV Trigger: CACAGATGCCTCAGCTTTCCACATAACATGGGCATG...GGGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR GCA 90 bp | CCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGAATCTCTCCAAACATTaGCAAACACTCCTGGCTGAG | + |
Preference number: 2 (lower is better) Translates to: PRTPSVALGSLAVGLSRRNLSKH*QTLLAE Trigger: CTCAGCCAGGAGTGTTTGGCAATGTTTGGAGAGATT...CCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CCA 90 bp | CCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCTCTCAGATCTCACTTaGTTGCTATTAAGGGTCTGC | + |
Preference number: 2 (lower is better) Translates to: PRTPSVALGSLAVGLSRRLSDLT*LLLRVC Trigger: GCAGACCCTTAATAGCAACCAAGTGAGATCTGAGAG...CCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CCA 90 bp | GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTTGGGCTCCTTGGCTGTaGGGCTGTCCCGCAGGCACA | + |
Preference number: 2 (lower is better) Translates to: AETVTQGCTCTHSSIRSSWAPWL*GCPAGT Trigger: TGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCA...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CCA 90 bp | CTGCTGCCCCCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCCAGGTGGTGATTAGCTaGGTTCATGCCCATGTTATG | + |
Preference number: 2 (lower is better) Translates to: LLPPVDLSKEVIPSPALLQVVIS*VHAHVM Trigger: CATAACATGGGCATGAACCCAGCTAATCACCACCTG...GAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGGGGGCAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CCA 90 bp | CCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCCATGGATAAATGAATaGATGGGTAGTTCACTGAAC | + |
Preference number: 2 (lower is better) Translates to: PRTPSVALGSLAVGLSRRPWINE*MGSSLN Trigger: GTTCAGTGAACTACCCATCCATTCATTTATCCATGG...CCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CCA 90 bp | CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCATACAAGGCTGCTGTTaGGATGCCTGTGCCCAGGAC | + |
Preference number: 2 (lower is better) Translates to: PVDLSKEVIPSPALLILVIQGCC*DACAQD Trigger: GTCCTGGGCACAGGCATCCCAACAGCAGCCTTGTAT...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CCA 90 bp | CTGCTGCCCCCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCAGGCCCTGTCCTAAGTaGTCAGCAATTTTTACATTC | + |
Preference number: 2 (lower is better) Translates to: LLPPVDLSKEVIPSPALLRPCPK*SAIFTF Trigger: GAATGTAAAAATTGCTGACCACTTAGGACAGGGCCT...GAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGGGGGCAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CCA 90 bp | CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCATTGCCAAACACTCCTaGCTGAGAGGCCCTGTCCTA | + |
Preference number: 2 (lower is better) Translates to: PVDLSKEVIPSPALLILVIAKHS*LRGPVL Trigger: TAGGACAGGGCCTCTCAGCCAGGAGTGTTTGGCAAT...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR GCA 90 bp | CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCGCGGTCTGTGGATTCTaGAGCAACCTGAAATCAATG | + |
Preference number: 2 (lower is better) Translates to: PVDLSKEVIPSPALLILVAVCGF*SNLKSM Trigger: CATTGATTTCAGGTTGCTGCAGAATCCACAGACCGC...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR GCA 90 bp | TGGTGCATGGCTCTAGTCCCACACTTGGGAGGCAGAGGTAGGTGGATTTCTGTGGAAGTTGGTCTTTCTTaGCATGTTTGCCATCTGTCC | + |
Preference number: 2 (lower is better) Translates to: WCMALVPHLGGRGRWISVEVGLS*HVCHLS Trigger: GGACAGATGGCAAACATGGCAAGAAAGACCAACTTC...CACAGAAATCCACCTACCTCTGCCTCCCAAGTGTGGGACTAGAGCCATGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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3UTR-3UTR CCA 90 bp | GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTACATGCACAGAAGAGTaGGTTCCTGGTCAGAGGGAA | + |
Preference number: 2 (lower is better) Translates to: AETVTQGCTCTHSSIRSSTCTEE*VPGQRE Trigger: TTCCCTCTGACCAGGAACCCACTCTTCTGTGCATGT...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CCA 90 bp | CTGCCGTCTCCCCTCCTCCACACTGGATACAGGTGTTCATCCCATTCATTTTCATCGGGATACTGTTCATaGCCCAGCACATCACGAAAT | + |
Preference number: 2 (lower is better) Translates to: LPSPLLHTGYRCSSHSFSSGYCS*PSTSRN Trigger: ATTTCGTGATGTGCTGGGCCATGAACAGTATCCCGA...TGAAAATGAATGGGATGAACACCTGTATCCAGTGTGGAGGAGGGGAGACGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203757.2 |
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3UTR-3UTR TCA 90 bp | CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCGGATGGGTAGTTCACTaGACTACACAGGGAAAATTT | + |
Preference number: 2 (lower is better) Translates to: PVDLSKEVIPSPALLILVGWVVH*TTQGKF Trigger: AAATTTTCCCTGTGTAGTTCAGTGAACTACCCATCC...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR TCA 90 bp | TGCTCATTCTTGTCCTGGAACCAGCAGAATAAGGATTCTCTGTTGGTTTCTCAGAGCGGCCATGTGAAGTaGGTCAGAGAGGGACAGCAT | + |
Preference number: 2 (lower is better) Translates to: CSFLSWNQQNKDSLLVSQSGHVK*VREGQH Trigger: ATGCTGTCCCTCTCTGACTCACTTCACATGGCCGCT...CTGAGAAACCAACAGAGAATCCTTATTCTGCTGGTTCCAGGACAAGAATGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR TCA 90 bp | CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCGATTCTGCAGCAACCTaGAATCAATGTCCTGTTTTG | + |
Preference number: 2 (lower is better) Translates to: PVDLSKEVIPSPALLILVDSAAT*NQCPVL Trigger: CAAAACAGGACATTGATTTCAGGTTGCTGCAGAATC...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR GCA 90 bp | TGCTCATTCTTGTCCTGGAACCAGCAGAATAAGGATTCTCTGTTGGTTTCTCAGTCAGGAGCTCAGGCATaGTCAGTGAGTTGGAAGGCA | + |
Preference number: 2 (lower is better) Translates to: CSFLSWNQQNKDSLLVSQSGAQA*SVSWKA Trigger: TGCCTTCCAACTCACTGAGCATGCCTGAGCTCCTGA...CTGAGAAACCAACAGAGAATCCTTATTCTGCTGGTTCCAGGACAAGAATGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR TCA 90 bp | GGCTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATACCCCTTCTACAGCTaGGACAGAGGCAGAAAAGAC | + |
Preference number: 2 (lower is better) Translates to: GYFFHSADSSLTRVTWKIYPFYS*DRGRKD Trigger: GTCTTTTCTGCCTCTGTCTCAGCTGTAGAAGGGGTA...TATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR GCA 90 bp | CCCACCCTAGTTTTGACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGCCAGCCACATACTTCTaGACAGCTCACATACATGCA | + |
Preference number: 2 (lower is better) Translates to: PTLVLTTTNLSKHCQTLLPATYF*TAHIHA Trigger: TGCATGTATGTGAGCTGTGCAGAAGTATGTGGCTGG...CAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGTCAAAACTAGGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CCA 90 bp | ACAGGTGTTCATCCCATTCATTTTCATCCGAAGACCAGCCACGTAATTGGTTGTTCTCTGGAACCCATATaGCAGAAGGAAAGCAGCGAG | + |
Preference number: 2 (lower is better) Translates to: TGVHPIHFHPKTSHVIGCSLEPI*QKESSE Trigger: CTCGCTGCTTTCCTTCTGCCATATGGGTTCCAGAGA...ACAACCAATTACGTGGCTGGTCTTCGGATGAAAATGAATGGGATGAACACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203757.2 |
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3UTR-3UTR GCA 90 bp | CTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATATGGCTGTTCTGTATCTaGTGTTCTCTGCTGCCCCCT | + |
Preference number: 2 (lower is better) Translates to: LFLPFCRQFPYQGHLENIWLFCI*CSLLPP Trigger: AGGGGGCAGCAGAGAACAGCAGATACAGAACAGCCA...TATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CCA 90 bp | GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTAGAAGAGTGGGTTCCTaGTCAGAGGGAAGGCCAAAG | + |
Preference number: 2 (lower is better) Translates to: ETLSLPMSSLKCYLTTLPRRVGS*SEGRPK Trigger: CTTTGGCCTTCCCTCTGACCAGGAACCCACTCTTCT...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CCA 90 bp | CTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATAAAGCTGAGGCATCTGTaGTATCTCCCCCAGTTAACC | + |
Preference number: 2 (lower is better) Translates to: LFLPFCRQFPYQGHLENIKLRHL*YLPQLT Trigger: GGTTAACTGGGGGAGATACCACAGATGCCTCAGCTT...TATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR GCA 90 bp | CTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATACACAGCTCACATACATaGACAGAAGAGTGGGTTCCT | + |
Preference number: 2 (lower is better) Translates to: LFLPFCRQFPYQGHLENIHSSHT*TEEWVP Trigger: AGGAACCCACTCTTCTGTGCATGTATGTGAGCTGTG...TATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR GCA 90 bp | AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCCTTCTGAGACCAACATaGAGACCTCACTTTATCCCC | + |
Preference number: 2 (lower is better) Translates to: RWISVSSRQPGLHSKFKVLLRPT*RPHFIP Trigger: GGGGATAAAGTGAGGTCTGCATGTTGGTCTCAGAAG...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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3UTR-3UTR CCA 90 bp | GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTCTTTATAAGTGTCCATaGATAAATGAATGGATGGGT | + |
Preference number: 2 (lower is better) Translates to: AETVTQGCTCTHSSIRSSLYKCP*INEWMG Trigger: ACCCATCCATTCATTTATCCATGGACACTTATAAAG...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CCA 90 bp | GGCTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATGCTCATTCTTGTCCTaGAACCAGCAGAATAAGGAT | + |
Preference number: 2 (lower is better) Translates to: GYFFHSADSSLTRVTWKICSFLS*NQQNKD Trigger: ATCCTTATTCTGCTGGTTCCAGGACAAGAATGAGCA...TATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
||
3UTR-3UTR GCA 90 bp | CTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATAGTTGGTCCTCCACAATaGCTCAAAAATGAGCAGTCA | + |
Preference number: 2 (lower is better) Translates to: LFLPFCRQFPYQGHLENIVGPPQ*LKNEQS Trigger: TGACTGCTCATTTTTGAGGCATTGTGGAGGACCAAC...TATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
||
3UTR CAA 90 bp | AGGCTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTaGGAAAATATAAATCGACACAATTTACTATTTCAGACTTCTTTC | + |
Preference number: 2 (lower is better) Translates to: RLFLPFCRQFPYQGH*ENINRHNLLFQTSF Trigger: GAAAGAAGTCTGAAATAGTAAATTGTGTCGATTTATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
||
3UTR-3UTR TCA 90 bp | AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACATCCTGCATTTCTACATaGTCATCCCAGAGGTGTATT | + |
Preference number: 2 (lower is better) Translates to: RSSICTCVTYSKDLQIFTSCIST*SSQRCI Trigger: AATACACCTCTGGGATGATCATGTAGAAATGCAGGA...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
||
3UTR-3UTR GCA 90 bp | AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACACTTTCTTGCCATGTTTaGCATCTGTCCTGCATTTCT | + |
Preference number: 2 (lower is better) Translates to: RSSICTCVTYSKDLQIFTLSCHV*HLSCIS Trigger: AGAAATGCAGGACAGATGGCAAACATGGCAAGAAAG...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
||
3UTR CAA 90 bp | TCTGTCCTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTaGTATTTGTTGTCAAGAATTATCTGCAAATGCTATAGAACTTTA | + |
Preference number: 2 (lower is better) Translates to: SVLHFYMIIPEVYSH*YLLSRIICKCYRTL Trigger: TAAAGTTCTATAGCATTTGCAGATAATTCTTGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAGGACAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
||
3UTR CCA 72 bp | CCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTaGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCC | + |
Preference number: 3 (lower is better) Translates to: PGLLQLLWAPWL*GCPAGTGCSAA Trigger: GGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
||
3UTR CCA 72 bp | CTGTGCCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTaGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCA | + |
Preference number: 3 (lower is better) Translates to: LCPGLLQLLWAP*LWGCPAGTGCS Trigger: TGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
||
3UTR CCA 72 bp | TTGGGATGCCTGTGCCCAGGACTCCTTCAGTTGCTCTaGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACA | + |
Preference number: 3 (lower is better) Translates to: LGCLCPGLLQLL*APWLWGCPAGT Trigger: TGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CAA 90 bp | TCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCCCACCCCACCCTAGTTTaGACAACCACAAATCTCTCC | + |
Preference number: 3 (lower is better) Translates to: SGLLGCGAVPQAQGVQQPHPTLV*TTTNLS Trigger: GGAGAGATTTGTGGTTGTCAAAACTAGGGTGGGGTG...GGGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CAA 90 bp | CCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGACTCTCAGATCTCACTaGGTTGCTATTAAGGGTCTG | + |
Preference number: 3 (lower is better) Translates to: PRTPSVALGSLAVGLSRRTLRSH*VAIKGL Trigger: CAGACCCTTAATAGCAACCAAGTGAGATCTGAGAGT...CCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
||
3UTR GCA 72 bp | TCAGGGCTCGGTTCAGATACAAGGCTGCTGTTGGGATaGCTGTGCCCAGGACTCCTTCAGTTGCTCTGGGCT | + |
Preference number: 3 (lower is better) Translates to: SGLGSDTRLLLG*LCPGLLQLLWA Trigger: AGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAGCCTTGTATCTGAACCGAGCCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR CCA 72 bp | AGATGTCAGGGCTCGGTTCAGATACAAGGCTGCTGTTaGGATGCCTGTGCCCAGGACTCCTTCAGTTGCTCT | + |
Preference number: 3 (lower is better) Translates to: RCQGSVQIQGCC*DACAQDSFSCS Trigger: AGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAGCCTTGTATCTGAACCGAGCCCTGACATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
||
3UTR CCA 72 bp | GCCCAGCACATCACGAAATCCGCGGACTTCCTTCTCTaGAACCCATATGGCAGAAGGAAAGCAGCGAGCGAT | + |
Preference number: 3 (lower is better) Translates to: AQHITKSADFLL*NPYGRRKAASD Trigger: ATCGCTCGCTGCTTTCCTTCTGCCATATGGGTTCCAGAGAAGGAAGTCCGCGGATTTCGTGATGTGCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203757.2 |
||
3UTR-3UTR CAA 90 bp | GGCTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATAGTTGCTCTGGGCTCCTaGGCTGTGGGGCTGTCCCGC | + |
Preference number: 3 (lower is better) Translates to: GYFFHSADSSLTRVTWKIVALGS*AVGLSR Trigger: GCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAAC...TATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
||
3UTR GCA 72 bp | GTTCCCAGCCACATACTTCTGCACAGCTCACATACATaGACAGAAGAGTGGGTTCCTGGTCAGAGGGAAGGC | + |
Preference number: 3 (lower is better) Translates to: VPSHILLHSSHT*TEEWVPGQREG Trigger: GCCTTCCCTCTGACCAGGAACCCACTCTTCTGTGCATGTATGTGAGCTGTGCAGAAGTATGTGGCTGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR GCA 72 bp | AGCTTTAGATGTCAGGGCTCGGTTCAGATACAAGGCTaGTGTTGGGATGCCTGTGCCCAGGACTCCTTCAGT | + |
Preference number: 3 (lower is better) Translates to: SFRCQGSVQIQG*CWDACAQDSFS Trigger: ACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAGCCTTGTATCTGAACCGAGCCCTGACATCTAAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR GCA 72 bp | TGTCCCCAGGCTGAGACTGTAACACAAGGCTGTACCTaGACTCATTCTTCCATCAGGAGCAGTAGCGGCCAT | + |
Preference number: 3 (lower is better) Translates to: CPQAETVTQGCT*THSSIRSSSGH Trigger: ATGGCCGCTACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGCCTGGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
||
3UTR TCA 72 bp | CATTCTTCCATCAGGAGCAGTAGCGGCCATGTGAAGTaGGTCAGAGAGGGACAGCATACCCCTTCTACAGCT | + |
Preference number: 3 (lower is better) Translates to: HSSIRSSSGHVK*VREGQHTPSTA Trigger: AGCTGTAGAAGGGGTATGCTGTCCCTCTCTGACTCACTTCACATGGCCGCTACTGCTCCTGATGGAAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
||
3UTR TCA 72 bp | GCACTCATTCTTCCATCAGGAGCAGTAGCGGCCATGTaGAGTGAGTCAGAGAGGGACAGCATACCCCTTCTA | + |
Preference number: 3 (lower is better) Translates to: ALILPSGAVAAM*SESERDSIPLL Trigger: TAGAAGGGGTATGCTGTCCCTCTCTGACTCACTTCACATGGCCGCTACTGCTCCTGATGGAAGAATGAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR CCA 72 bp | CAGGTGGTGATTAGCTGGGTTCATGCCCATGTTATGTaGAAAGCTGAGGCATCTGTGGTATCTCCCCCAGTT | + |
Preference number: 3 (lower is better) Translates to: QVVISWVHAHVM*KAEASVVSPPV Trigger: AACTGGGGGAGATACCACAGATGCCTCAGCTTTCCACATAACATGGGCATGAACCCAGCTAATCACCACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CAA 90 bp | GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTTCAGATCTCACTTGGTaGCTATTAAGGGTCTGCTGG | + |
Preference number: 3 (lower is better) Translates to: AETVTQGCTCTHSSIRSSSDLTW*LLRVCW Trigger: CCAGCAGACCCTTAATAGCAACCAAGTGAGATCTGA...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR TCA 72 bp | CGTCCCTTCTTCTTCAGTTCCATTTCCCCGTGGGTATaGAGTTGGTCTTTCTTGCCATGTTTGCCATCTGTC | + |
Preference number: 3 (lower is better) Translates to: RPFFFSSISPWV*SWSFLPCLPSV Trigger: GACAGATGGCAAACATGGCAAGAAAGACCAACTTCATACCCACGGGGAAATGGAACTGAAGAAGAAGGGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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3UTR CCA 72 bp | GTGTTTGGAACCATGGGGTGGAGTCTAAGCGGTCTGTaGATTCTGCAGCAACCTGAAATCAATGTCCTGTTT | + |
Preference number: 3 (lower is better) Translates to: VFGTMGWSLSGL*ILQQPEINVLF Trigger: AAACAGGACATTGATTTCAGGTTGCTGCAGAATCCACAGACCGCTTAGACTCCACCCCATGGTTCCAAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CAA 90 bp | GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTACAAAAAGCTTCTTTTaGCTTCTAGGCCACCTAGTG | + |
Preference number: 3 (lower is better) Translates to: AETVTQGCTCTHSSIRSSTKSFF*LLGHLV Trigger: CACTAGGTGGCCTAGAAGCAAAAAGAAGCTTTTTGT...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR GCA 72 bp | ATCCTTAGAGAACAACAGTTCCCAGCCACATACTTCTaGACAGCTCACATACATGCACAGAAGAGTGGGTTC | + |
Preference number: 3 (lower is better) Translates to: ILREQQFPATYF*TAHIHAQKSGF Trigger: GAACCCACTCTTCTGTGCATGTATGTGAGCTGTGCAGAAGTATGTGGCTGGGAACTGTTGTTCTCTAAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR GCA 72 bp | CTACAGCTGAGACAGAGGCAGAAAAGACTCCTAACATaGCATGTCACTAGGTCACAAAGCTTTAGATGTCAG | + |
Preference number: 3 (lower is better) Translates to: LQLRQRQKRLLT*HVTRSQSFRCQ Trigger: CTGACATCTAAAGCTTTGTGACCTAGTGACATGGCATGTTAGGAGTCTTTTCTGCCTCTGTCTCAGCTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR GCA 72 bp | AAGCCATCCCTGTCTCTTAGGCTATTTCTTCCATTCTaGAGACAGTTCCCTTACCAGGGTCACTTGGAAAAT | + |
Preference number: 3 (lower is better) Translates to: KPSLSLRLFLPF*RQFPYQGHLEN Trigger: ATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCCTAAGAGACAGGGATGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR CCA 72 bp | AAGGATTCTCTGTTGGTTTCTCAGAAATCCAAATTATaGGGTCCCACCTCCACAAGACAGTGTTTGGAACCA | + |
Preference number: 3 (lower is better) Translates to: KDSLLVSQKSKL*GPTSTRQCLEP Trigger: TGGTTCCAAACACTGTCTTGTGGAGGTGGGACCCCATAATTTGGATTTCTGAGAAACCAACAGAGAATCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR CCA 72 bp | TCTTGTCCTGGAACCAGCAGAATAAGGATTCTCTGTTaGTTTCTCAGAAATCCAAATTATGGGGTCCCACCT | + |
Preference number: 3 (lower is better) Translates to: SCPGTSRIRILC*FLRNPNYGVPP Trigger: AGGTGGGACCCCATAATTTGGATTTCTGAGAAACCAACAGAGAATCCTTATTCTGCTGGTTCCAGGACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR CCA 72 bp | TCAAGTGCAGCCCACCACATGCTTTATAAGTGTCCATaGATAAATGAATGGATGGGTAGTTCACTGAACTAC | + |
Preference number: 3 (lower is better) Translates to: SSAAHHMLYKCP*INEWMGSSLNY Trigger: GTAGTTCAGTGAACTACCCATCCATTCATTTATCCATGGACACTTATAAAGCATGTGGTGGGCTGCACTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR CCA 72 bp | ATCCAGTTGTCTACCTTCATCAAGGTAGATACAGTCTaGACTCTCAGATCTCACTTGGTTGCTATTAAGGGT | + |
Preference number: 3 (lower is better) Translates to: IQLSTFIKVDTV*TLRSHLVAIKG Trigger: ACCCTTAATAGCAACCAAGTGAGATCTGAGAGTCCAGACTGTATCTACCTTGATGAAGGTAGACAACTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR-3UTR CAA 90 bp | AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCTCTTTCTTGCCATGTTaGCCATCTGTCCTGCATTTC | + |
Preference number: 3 (lower is better) Translates to: RWISVSSRQPGLHSKFKVSFLPC*PSVLHF Trigger: GAAATGCAGGACAGATGGCAAACATGGCAAGAAAGA...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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3UTR CCA 72 bp | CACCACATGCTTTATAAGTGTCCATGGATAAATGAATaGATGGGTAGTTCACTGAACTACACAGGGAAAATT | + |
Preference number: 3 (lower is better) Translates to: HHMLYKCPWINE*MGSSLNYTGKI Trigger: AATTTTCCCTGTGTAGTTCAGTGAACTACCCATCCATTCATTTATCCATGGACACTTATAAAGCATGTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR TCA 72 bp | AATATAGTTTACATTGCCAGCTGTAGAAACAGGCTCTaGCAAATGGCATCATTAAGCAATTTCATTGTACAA | + |
Preference number: 3 (lower is better) Translates to: NIVYIASCRNRL*QMASLSNFIVQ Trigger: TTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTGTTTCTACAGCTGGCAATGTAAACTATATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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3UTR CAA 72 bp | CCTGTGCCCAGGACTCCTTCAGTTGCTCTGGGCTCCTaGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTC | + |
Preference number: 4 (lower is better) Translates to: PVPRTPSVALGS*AVGLSRRHRVF Trigger: GAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR CAA 72 bp | CTGCTGTTGGGATGCCTGTGCCCAGGACTCCTTCAGTaGCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCA | + |
Preference number: 4 (lower is better) Translates to: LLLGCLCPGLLQ*LWAPWLWGCPA Trigger: TGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | GCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCTCCCCTCCTCCACACTaGATACAGGTGTTCATCCCA | + |
Preference number: 4 (lower is better) Translates to: ALGSLAVGLSRRHRVFSSSPPPH*IQVFIP Trigger: TGGGATGAACACCTGTATCCAGTGTGGAGGAGGGGA...GCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | CTGCTGCCCCCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCAATCGCTTGGCAGCCTaGAGAGGCAGTCCTGCAGCC | + |
Preference number: 4 (lower is better) Translates to: LLPPVDLSKEVIPSPALLNRLAA*RGSPAA Trigger: GGCTGCAGGACTGCCTCTCCAGGCTGCCAAGCGATT...GAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGGGGGCAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | GCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCTTAGCATCTTCCTTCTaGCATCTGGGGAACACCAGG | + |
Preference number: 4 (lower is better) Translates to: ALGSLAVGLSRRHRVFSSLASSF*HLGNTR Trigger: CCTGGTGTTCCCCAGATGCCAGAAGGAAGATGCTAA...GCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR TCA 90 bp | TGGTGCATGGCTCTAGTCCCACACTTGGGAGGCAGAGGTAGGTGGATTTCTGTGACCCACCAGAGCCGGTaGGTCACTGGTCAGGACTGC | + |
Preference number: 4 (lower is better) Translates to: WCMALVPHLGGRGRWISVTHQSR*VTGQDC Trigger: GCAGTCCTGACCAGTGACTCACCGGCTCTGGTGGGT...CACAGAAATCCACCTACCTCTGCCTCCCAAGTGTGGGACTAGAGCCATGCACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR GCA 90 bp | TGGTGCATGGCTCTAGTCCCACACTTGGGAGGCAGAGGTAGGTGGATTTCTGTGGCATGGCCCGGGCACTaGAGTTTGCACGGTGAGGTT | + |
Preference number: 4 (lower is better) Translates to: WCMALVPHLGGRGRWISVAWPGH*SLHGEV Trigger: AACCTCACCGTGCAAACTGCAGTGCCCGGGCCATGC...CACAGAAATCCACCTACCTCTGCCTCCCAAGTGTGGGACTAGAGCCATGCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CCA 90 bp | CTGCCGTCTCCCCTCCTCCACACTGGATACAGGTGTTCATCCCATTCATTTTCAGTGCCCGTCCCTGCTTaGCAGCCTGGAGAGGCAGTC | + |
Preference number: 4 (lower is better) Translates to: LPSPLLHTGYRCSSHSFSVPVPA*QPGEAV Trigger: GACTGCCTCTCCAGGCTGCCAAGCAGGGACGGGCAC...TGAAAATGAATGGGATGAACACCTGTATCCAGTGTGGAGGAGGGGAGACGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203757.2 |
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CDS-3UTR GCA 90 bp | TGGTGCATGGCTCTAGTCCCACACTTGGGAGGCAGAGGTAGGTGGATTTCTGTGCTGGAGAGGCAGTCCTaGAGCCAGCAGCAGAAATCC | + |
Preference number: 4 (lower is better) Translates to: WCMALVPHLGGRGRWISVLERQS*SQQQKS Trigger: GGATTTCTGCTGCTGGCTGCAGGACTGCCTCTCCAG...CACAGAAATCCACCTACCTCTGCCTCCCAAGTGTGGGACTAGAGCCATGCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CCA 90 bp | CCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGTCAAAGTGTGATTGTTaGAGACAAACAGGCCAGTGT | + |
Preference number: 4 (lower is better) Translates to: PRTPSVALGSLAVGLSRRSKCDC*RQTGQC Trigger: ACACTGGCCTGTTTGTCTCCAACAATCACACTTTGA...CCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | ACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGGCTGAGAGGCCCTGTCGAAGGGGGAGGGCATaGCCCGGGCACTGCAGTTTG | + |
Preference number: 4 (lower is better) Translates to: TTTNLSKHCQTLLAERPCRRGRA*PGHCSL Trigger: CAAACTGCAGTGCCCGGGCCATGCCCTCCCCCTTCG...ACAGGGCCTCTCAGCCAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | ATTGGTTGTGCTCTCTCATGTGATCGGGATACTGTTCATGGCCCAGCACATCACCCCTGCTTGGCAGCCTaGAGAGGCAGTCCTGCAGCC | + |
Preference number: 4 (lower is better) Translates to: IGCALSCDRDTVHGPAHHPCLAA*RGSPAA Trigger: GGCTGCAGGACTGCCTCTCCAGGCTGCCAAGCAGGG...GTGATGTGCTGGGCCATGAACAGTATCCCGATCACATGAGAGAGCACAACCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203757.2 |
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CDS-3UTR TCA 90 bp | CTGCTGCCCCCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCCATCATCTCCCAGAGTaGAATTCACACAGTAGGTGC | + |
Preference number: 4 (lower is better) Translates to: LLPPVDLSKEVIPSPALLHHLPE*NSHSRC Trigger: GCACCTACTGTGTGAATTTCACTCTGGGAGATGATG...GAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGGGGGCAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR GCA 90 bp | CCCTCCTCCACACTGGATACAGGTGTTCATCCCATTCATTTTCATCCGAAGACCATGTGTGCCCGTCCCTaGTTGGCAGCCTGGAGAGGC | + |
Preference number: 4 (lower is better) Translates to: PSSTLDTGVHPIHFHPKTMCARP*LAAWRG Trigger: GCCTCTCCAGGCTGCCAAGCAGGGACGGGCACACAT...GGTCTTCGGATGAAAATGAATGGGATGAACACCTGTATCCAGTGTGGAGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203757.2 |
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CDS-3UTR CCA 90 bp | TGGTGCATGGCTCTAGTCCCACACTTGGGAGGCAGAGGTAGGTGGATTTCTGTGCATCACGAAATCGCTTaGCAGCCTGGAGAGGCAGTC | + |
Preference number: 4 (lower is better) Translates to: WCMALVPHLGGRGRWISVHHEIA*QPGEAV Trigger: GACTGCCTCTCCAGGCTGCCAAGCGATTTCGTGATG...CACAGAAATCCACCTACCTCTGCCTCCCAAGTGTGGGACTAGAGCCATGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR GCA 90 bp | GTTGTGCTCTCTCATGTGATCGGGATACTGTTCATGGCCCAGCACATCACGAAAACCTCCACACATGTGTaGCCGTCCCTGCTTGGCAGC | + |
Preference number: 4 (lower is better) Translates to: VVLSHVIGILFMAQHITKTSTHV*PSLLGS Trigger: GCTGCCAAGCAGGGACGGGCACACATGTGTGGAGGT...TTTCGTGATGTGCTGGGCCATGAACAGTATCCCGATCACATGAGAGAGCACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203757.2 |
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CDS-3UTR GCA 90 bp | GTTGTGCTCTCTCATGTGATCGGGATACTGTTCATGGCCCAGCACATCACGAAACTGGAGAGGCAGTCCTaGAGCCAGCAGCAGAAATCC | + |
Preference number: 4 (lower is better) Translates to: VVLSHVIGILFMAQHITKLERQS*SQQQKS Trigger: GGATTTCTGCTGCTGGCTGCAGGACTGCCTCTCCAG...TTTCGTGATGTGCTGGGCCATGAACAGTATCCCGATCACATGAGAGAGCACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203757.2 |
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CDS-3UTR CCA 90 bp | CCCACCCTAGTTTTGACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGCGGTTCTGGGCGATCTaGCAGGTGGGGTCGGAGATG | + |
Preference number: 4 (lower is better) Translates to: PTLVLTTTNLSKHCQTLLRFWAI*QVGSEM Trigger: CATCTCCGACCCCACCTGCCAGATCGCCCAGAACCG...CAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGTCAAAACTAGGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCCTTGTCCTGGAGCAATaGATCCTTCTCCTGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: PVDLSKEVIPSPALLILVLVLEQ*ILLLVS Trigger: GGAGACCAGGAGAAGGATCCATTGCTCCAGGACAAG...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR TCA 90 bp | TCTCAGCCAACATCAATCAAGCCATCCCTGTCTCTTAGGCTATTTCTTCCATTCTCAGGCCCTTGCCCTTaGCCGTGTTCCTGGGGCAGT | + |
Preference number: 4 (lower is better) Translates to: SQPTSIKPSLSLRLFLPFSGPCP*PCSWGS Trigger: ACTGCCCCAGGAACACGGTCAAGGGCAAGGGCCTGA...GAATGGAAGAAATAGCCTAAGAGACAGGGATGGCTTGATTGATGTTGGCTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR TCA 90 bp | GTTGTGCTCTCTCATGTGATCGGGATACTGTTCATGGCCCAGCACATCACGAAACACAGACTTGTCCACTaGCCTCCACACATGTGTGCC | + |
Preference number: 4 (lower is better) Translates to: VVLSHVIGILFMAQHITKHRLVH*PPHMCA Trigger: GGCACACATGTGTGGAGGTCAGTGGACAAGTCTGTG...TTTCGTGATGTGCTGGGCCATGAACAGTATCCCGATCACATGAGAGAGCACAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203757.2 |
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CDS-3UTR GCA 90 bp | CCCACCCTAGTTTTGACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGAGGAGTCCTTCCACCTaGCGTCTCCCCTCCTCCACA | + |
Preference number: 4 (lower is better) Translates to: PTLVLTTTNLSKHCQTLLRSPST*RLPSST Trigger: TGTGGAGGAGGGGAGACGGCAGGTGGAAGGACTCCT...CAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGTCAAAACTAGGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR GCA 90 bp | TCTCAGCCAACATCAATCAAGCCATCCCTGTCTCTTAGGCTATTTCTTCCATTCCTGGTCAGGACTGCCTaGACACGGCCTCCTTCCCAG | + |
Preference number: 4 (lower is better) Translates to: SQPTSIKPSLSLRLFLPFLVRTA*TRPPSQ Trigger: CTGGGAAGGAGGCCGTGTGCAGGCAGTCCTGACCAG...GAATGGAAGAAATAGCCTAAGAGACAGGGATGGCTTGATTGATGTTGGCTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR GCA 90 bp | CCCACCCTAGTTTTGACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGGTCACTGGTCAGGACTaGCTGCACACGGCCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: PTLVLTTTNLSKHCQTLLVTGQD*LHTASF Trigger: GAAGGAGGCCGTGTGCAGGCAGTCCTGACCAGTGAC...CAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGTCAAAACTAGGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | AGAACAACAGTTCCCAGCCACATACTTCTGCACAGCTCACATACATGCACAGAAAGTCCATCAGGGAGTTaGCAGGCTGCGGTGTGGGCA | + |
Preference number: 4 (lower is better) Translates to: RTTVPSHILLHSSHTCTESPSGS*QAAVWA Trigger: TGCCCACACCGCAGCCTGCCAACTCCCTGATGGACT...TTCTGTGCATGTATGTGAGCTGTGCAGAAGTATGTGGCTGGGAACTGTTGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR TCA 90 bp | GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTCGATGGGGAGGTCTCTaGGGAAGATCTCATCAGACA | + |
Preference number: 4 (lower is better) Translates to: AETVTQGCTCTHSSIRSSRWGGL*GRSHQT Trigger: TGTCTGATGAGATCTTCCTCAGAGACCTCCCCATCG...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR TCA 90 bp | ACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGGCTGAGAGGCCCTGTAGGTGCCAGACCCATTaGAGGCTCTTCTCACAGACA | + |
Preference number: 4 (lower is better) Translates to: TTTNLSKHCQTLLAERPCRCQTH*RLFSQT Trigger: TGTCTGTGAGAAGAGCCTTCAATGGGTCTGGCACCT...ACAGGGCCTCTCAGCCAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR TCA 90 bp | CCCACCCTAGTTTTGACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGAGATCAGGGTGCTGGTaGGGGCCAGGCTTGCATCAT | + |
Preference number: 4 (lower is better) Translates to: PTLVLTTTNLSKHCQTLLRSGCW*GPGLHH Trigger: ATGATGCAAGCCTGGCCCTCACCAGCACCCTGATCT...CAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGTCAAAACTAGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | ACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGGCTGAGAGGCCCTGTGTCCTTGGCTTGTCCTaGAGCAATGGATCCTTCTCC | + |
Preference number: 4 (lower is better) Translates to: TTTNLSKHCQTLLAERPCVLGLS*SNGSFS Trigger: GGAGAAGGATCCATTGCTCCAGGACAAGCCAAGGAC...ACAGGGCCTCTCAGCCAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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3UTR CAA 72 bp | CACGCACCATACACAAAGCCCGGGCCCATTATAATTTaGTCAGGAGCTCAGGCATGCTCAGTGAGTTGGAAG | + |
Preference number: 4 (lower is better) Translates to: HAPYTKPGPIII*SGAQACSVSWK Trigger: CTTCCAACTCACTGAGCATGCCTGAGCTCCTGACAAAATTATAATGGGCCCGGGCTTTGTGTATGGTGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR GCA 90 bp | GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTACCATCATCTGCCCCTaGAGTCCAGTTGTAGACATG | + |
Preference number: 4 (lower is better) Translates to: AETVTQGCTCTHSSIRSSTIICP*SPVVDM Trigger: CATGTCTACAACTGGACTGCAGGGGCAGATGATGGT...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | TGCTCATTCTTGTCCTGGAACCAGCAGAATAAGGATTCTCTGTTGGTTTCTCAGCATTTCTTCCATCCATaGGGGCGAGGGAAGGGCCTC | + |
Preference number: 4 (lower is better) Translates to: CSFLSWNQQNKDSLLVSQHFFHP*GRGKGL Trigger: GAGGCCCTTCCCTCGCCCCCATGGATGGAAGAAATG...CTGAGAAACCAACAGAGAATCCTTATTCTGCTGGTTCCAGGACAAGAATGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCACGAAGGGGGAGGGCATaGCCCGGGCACTGCAGTTTG | + |
Preference number: 4 (lower is better) Translates to: LHFYMIIPEVYSHLYLLSRRGRA*PGHCSL Trigger: CAAACTGCAGTGCCCGGGCCATGCCCTCCCCCTTCG...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR TCA 90 bp | GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTACCCACCAGAGCCGGTaGGTCACTGGTCAGGACTGC | + |
Preference number: 4 (lower is better) Translates to: ETLSLPMSSLKCYLTTLPTHQSR*VTGQDC Trigger: GCAGTCCTGACCAGTGACTCACCGGCTCTGGTGGGT...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR TCA 90 bp | CTGTGGATTCTGCAGCAACCTGAAATCAATGTCCTGTTTTGGGTACTAGTGAACAGACAGTCACTTCCATaGCCTGAGGGCCAGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: LWILQQPEINVLFWVLVNRQSLP*PEGQLS Trigger: TGACAGCTGGCCCTCAGGTCATGGAAGTGACTGTCT...GTTCACTAGTACCCAAAACAGGACATTGATTTCAGGTTGCTGCAGAATCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR GCA 90 bp | AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCAGGAGTCCTTCCACCTaGCGTCTCCCCTCCTCCACA | + |
Preference number: 4 (lower is better) Translates to: RWISVSSRQPGLHSKFKVRSPST*RLPSST Trigger: TGTGGAGGAGGGGAGACGGCAGGTGGAAGGACTCCT...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR GCA 90 bp | CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCACTGGTCAGGACTGCCTaGACACGGCCTCCTTCCCAG | + |
Preference number: 4 (lower is better) Translates to: LHFYMIIPEVYSHLYLLSLVRTA*TRPPSQ Trigger: CTGGGAAGGAGGCCGTGTGCAGGCAGTCCTGACCAG...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CCA 90 bp | TCTCAGCCAACATCAATCAAGCCATCCCTGTCTCTTAGGCTATTTCTTCCATTCCATCACGAAATCGCTTaGCAGCCTGGAGAGGCAGTC | + |
Preference number: 4 (lower is better) Translates to: SQPTSIKPSLSLRLFLPFHHEIA*QPGEAV Trigger: GACTGCCTCTCCAGGCTGCCAAGCGATTTCGTGATG...GAATGGAAGAAATAGCCTAAGAGACAGGGATGGCTTGATTGATGTTGGCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR TCA 90 bp | AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCAGATCAGGGTGCTGGTaGGGGCCAGGCTTGCATCAT | + |
Preference number: 4 (lower is better) Translates to: RWISVSSRQPGLHSKFKVRSGCW*GPGLHH Trigger: ATGATGCAAGCCTGGCCCTCACCAGCACCCTGATCT...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CCA 90 bp | CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCAAATCGCTTGGCAGCCTaGAGAGGCAGTCCTGCAGCC | + |
Preference number: 4 (lower is better) Translates to: LHFYMIIPEVYSHLYLLSNRLAA*RGSPAA Trigger: GGCTGCAGGACTGCCTCTCCAGGCTGCCAAGCGATT...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CCA 90 bp | CTGTGGATTCTGCAGCAACCTGAAATCAATGTCCTGTTTTGGGTACTAGTGAACCTTCCTTCTGGCATCTaGGGAACACCAGGTTCACCA | + |
Preference number: 4 (lower is better) Translates to: LWILQQPEINVLFWVLVNLPSGI*GTPGSP Trigger: TGGTGAACCTGGTGTTCCCCAGATGCCAGAAGGAAG...GTTCACTAGTACCCAAAACAGGACATTGATTTCAGGTTGCTGCAGAATCCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATCGGTTCTGGGCGATCTaGCAGGTGGGGTCGGAGATG | + |
Preference number: 4 (lower is better) Translates to: QALTNGIIKQFHCTNVRHRFWAI*QVGSEM Trigger: CATCTCCGACCCCACCTGCCAGATCGCCCAGAACCG...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CCA 90 bp | GGCTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATCTCAGAGGGGAGTCTaGGTCTTTGCCAGGGATAGA | + |
Preference number: 4 (lower is better) Translates to: GYFFHSADSSLTRVTWKISQRGV*VFARDR Trigger: TCTATCCCTGGCAAAGACCCAGACTCCCCTCTGAGA...TATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | TGCTCATTCTTGTCCTGGAACCAGCAGAATAAGGATTCTCTGTTGGTTTCTCAGAATGGATCCTTCTCCTaGTCTCCTCGGAAGAACGGG | + |
Preference number: 4 (lower is better) Translates to: CSFLSWNQQNKDSLLVSQNGSFS*SPRKNG Trigger: CCCGTTCTTCCGAGGAGACCAGGAGAAGGATCCATT...CTGAGAAACCAACAGAGAATCCTTATTCTGCTGGTTCCAGGACAAGAATGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR GCA 90 bp | GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTCTGGAGAGGCAGTCCTaGAGCCAGCAGCAGAAATCC | + |
Preference number: 4 (lower is better) Translates to: ETLSLPMSSLKCYLTTLPLERQS*SQQQKS Trigger: GGATTTCTGCTGCTGGCTGCAGGACTGCCTCTCCAG...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR GCA 90 bp | CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATGTCACTGGTCAGGACTaGCTGCACACGGCCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: QALTNGIIKQFHCTNVRHVTGQD*LHTASF Trigger: GAAGGAGGCCGTGTGCAGGCAGTCCTGACCAGTGAC...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR GCA 90 bp | GGTCCTCCACAATGCCTCAAAAATGAGCAGTCATTCTATAATACCATCATATTTGCATGGCCCGGGCACTaGAGTTTGCACGGTGAGGTT | + |
Preference number: 4 (lower is better) Translates to: GPPQCLKNEQSFYNTIIFAWPGH*SLHGEV Trigger: AACCTCACCGTGCAAACTGCAGTGCCCGGGCCATGC...AAATATGATGGTATTATAGAATGACTGCTCATTTTTGAGGCATTGTGGAGGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCACATTTCTTCCATCCATaGGGGCGAGGGAAGGGCCTC | + |
Preference number: 4 (lower is better) Translates to: LHFYMIIPEVYSHLYLLSHFFHP*GRGKGL Trigger: GAGGCCCTTCCCTCGCCCCCATGGATGGAAGAAATG...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CCA 90 bp | ACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGGCTGAGAGGCCCTGTTTCGGCAGTTTTCATTaGAAATGTCACTCAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: TTTNLSKHCQTLLAERPCFGSFH*KCHSAP Trigger: TGGAGCTGAGTGACATTTCCAATGAAAACTGCCGAA...ACAGGGCCTCTCAGCCAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR GCA 90 bp | GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTGGTGAGGGCCAGGCTTaGATCATCTCCCAGAGTGAA | + |
Preference number: 4 (lower is better) Translates to: ETLSLPMSSLKCYLTTLPGEGQA*IISQSE Trigger: TTCACTCTGGGAGATGATGCAAGCCTGGCCCTCACC...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | GGCTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATACACCGACCCAGTTTTTaGAAATACTGGCCAAGTGTG | + |
Preference number: 4 (lower is better) Translates to: GYFFHSADSSLTRVTWKIHRPSF*KYWPSV Trigger: CACACTTGGCCAGTATTTCCAAAAACTGGGTCGGTG...TATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACAAGTCCATCAGGGAGTTaGCAGGCTGCGGTGTGGGCA | + |
Preference number: 4 (lower is better) Translates to: RSSICTCVTYSKDLQIFTSPSGS*QAAVWA Trigger: TGCCCACACCGCAGCCTGCCAACTCCCTGATGGACT...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CCA 90 bp | CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCACTTCCTTCTGGCATCTaGGGAACACCAGGTTCACCA | + |
Preference number: 4 (lower is better) Translates to: LHFYMIIPEVYSHLYLLSLPSGI*GTPGSP Trigger: TGGTGAACCTGGTGTTCCCCAGATGCCAGAAGGAAG...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CCA 90 bp | CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCATCTCAGAGGGGAGTCTaGGTCTTTGCCAGGGATAGA | + |
Preference number: 4 (lower is better) Translates to: LHFYMIIPEVYSHLYLLSSQRGV*VFARDR Trigger: TCTATCCCTGGCAAAGACCCAGACTCCCCTCTGAGA...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR TCA 90 bp | CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATAGGTGCCAGACCCATTaGAGGCTCTTCTCACAGACA | + |
Preference number: 4 (lower is better) Translates to: QALTNGIIKQFHCTNVRHRCQTH*RLFSQT Trigger: TGTCTGTGAGAAGAGCCTTCAATGGGTCTGGCACCT...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR GCA 90 bp | CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCAGGGACATCTGCTATCTaGATGATGCTGACTTCCAGG | + |
Preference number: 4 (lower is better) Translates to: LHFYMIIPEVYSHLYLLSGTSAI*MMLTSR Trigger: CCTGGAAGTCAGCATCATGCAGATAGCAGATGTCCC...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR GCA 90 bp | AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACAGGTGAGGGCCAGGCTTaGATCATCTCCCAGAGTGAA | + |
Preference number: 4 (lower is better) Translates to: RSSICTCVTYSKDLQIFTGEGQA*IISQSE Trigger: TTCACTCTGGGAGATGATGCAAGCCTGGCCCTCACC...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CCA 90 bp | CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATTCCCCTCCTCCACACTaGATACAGGTGTTCATCCCA | + |
Preference number: 4 (lower is better) Translates to: QALTNGIIKQFHCTNVRHSPPPH*IQVFIP Trigger: TGGGATGAACACCTGTATCCAGTGTGGAGGAGGGGA...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CCA 90 bp | AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCCACCGACCCAGTTTTTaGAAATACTGGCCAAGTGTG | + |
Preference number: 4 (lower is better) Translates to: RWISVSSRQPGLHSKFKVHRPSF*KYWPSV Trigger: CACACTTGGCCAGTATTTCCAAAAACTGGGTCGGTG...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR TCA 90 bp | GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTGGTTCACCACAAAAGTaGTATTGGAACCCACCAGAG | + |
Preference number: 4 (lower is better) Translates to: ETLSLPMSSLKCYLTTLPGSPQK*YWNPPE Trigger: CTCTGGTGGGTTCCAATATCACTTTTGTGGTGAACC...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR TCA 90 bp | CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCAGGTTCACCACAAAAGTaGTATTGGAACCCACCAGAG | + |
Preference number: 4 (lower is better) Translates to: LHFYMIIPEVYSHLYLLSGSPQK*YWNPPE Trigger: CTCTGGTGGGTTCCAATATCACTTTTGTGGTGAACC...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR TCA 90 bp | AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACACGATGGGGAGGTCTCTaGGGAAGATCTCATCAGACA | + |
Preference number: 4 (lower is better) Translates to: RSSICTCVTYSKDLQIFTRWGGL*GRSHQT Trigger: TGTCTGATGAGATCTTCCTCAGAGACCTCCCCATCG...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR TCA 90 bp | CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCACATCATCTCCCAGAGTaGAATTCACACAGTAGGTGC | + |
Preference number: 4 (lower is better) Translates to: LHFYMIIPEVYSHLYLLSHHLPE*NSHSRC Trigger: GCACCTACTGTGTGAATTTCACTCTGGGAGATGATG...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR GCA 90 bp | GGTCCTCCACAATGCCTCAAAAATGAGCAGTCATTCTATAATACCATCATATTTGGGACATCTGCTATCTaGATGATGCTGACTTCCAGG | + |
Preference number: 4 (lower is better) Translates to: GPPQCLKNEQSFYNTIIFGTSAI*MMLTSR Trigger: CCTGGAAGTCAGCATCATGCAGATAGCAGATGTCCC...AAATATGATGGTATTATAGAATGACTGCTCATTTTTGAGGCATTGTGGAGGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATTTAGCATCTTCCTTCTaGCATCTGGGGAACACCAGG | + |
Preference number: 4 (lower is better) Translates to: QALTNGIIKQFHCTNVRHLASSF*HLGNTR Trigger: CCTGGTGTTCCCCAGATGCCAGAAGGAAGATGCTAA...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR GCA 90 bp | AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACAACCATCATCTGCCCCTaGAGTCCAGTTGTAGACATG | + |
Preference number: 4 (lower is better) Translates to: RSSICTCVTYSKDLQIFTTIICP*SPVVDM Trigger: CATGTCTACAACTGGACTGCAGGGGCAGATGATGGT...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CCA 90 bp | GGTCCTCCACAATGCCTCAAAAATGAGCAGTCATTCTATAATACCATCATATTTTCGGGATACTGTTCATaGCCCAGCACATCACGAAAT | + |
Preference number: 4 (lower is better) Translates to: GPPQCLKNEQSFYNTIIFSGYCS*PSTSRN Trigger: ATTTCGTGATGTGCTGGGCCATGAACAGTATCCCGA...AAATATGATGGTATTATAGAATGACTGCTCATTTTTGAGGCATTGTGGAGGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCATTCGGCAGTTTTCATTaGAAATGTCACTCAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: LHFYMIIPEVYSHLYLLSFGSFH*KCHSAP Trigger: TGGAGCTGAGTGACATTTCCAATGAAAACTGCCGAA...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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3UTR CAA 72 bp | CTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTaGGAAAATATAAATCGACACAATTTACTATTTCAG | + |
Preference number: 4 (lower is better) Translates to: LPFCRQFPYQGH*ENINRHNLLFQ Trigger: CTGAAATAGTAAATTGTGTCGATTTATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CCA 90 bp | AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACATCAAAGTGTGATTGTTaGAGACAAACAGGCCAGTGT | + |
Preference number: 4 (lower is better) Translates to: RSSICTCVTYSKDLQIFTSKCDC*RQTGQC Trigger: ACACTGGCCTGTTTGTCTCCAACAATCACACTTTGA...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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3UTR CAA 72 bp | CATTTCTACATGATCATCCCAGAGGTGTATTCTCACTaGTATTTGTTGTCAAGAATTATCTGCAAATGCTAT | + |
Preference number: 4 (lower is better) Translates to: HFYMIIPEVYSH*YLLSRIICKCY Trigger: ATAGCATTTGCAGATAATTCTTGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CAA 90 bp | GCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCATGGGGGTGGCCCCTTaGCAGGTCACAGTGAAGTCC | + |
Preference number: 5 (lower is better) Translates to: ALGSLAVGLSRRHRVFSSMGVAP*QVTVKS Trigger: GGACTTCACTGTGACCTGCAAAGGGGCCACCCCCAT...GCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS CCA 90 bp | CCATGGGGGCGAGGGAAGGGCCTCCTGTCCGGGAACCTGAGATGCTaGCTTCGGCTGGTGCCATCTTCCCAGTCACCATCATCTGCCCCT | + |
Preference number: 5 (lower is better) Translates to: PWGRGKGLLSGNLRC*LRLVPSSQSPSSAP Trigger: AGGGGCAGATGATGGTGACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTCAGGTTCCCGGACAGGAGGCCCTTCCCTCGCCCCCATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CCA 90 bp | AGCAGGCACAGCCCATCCACAGCCACAGGGCTGCAGACCCGGTTCTaGGCGATCTGGCAGGTGGGGTCGGAGATGATCGTACAGGCTTCC | + |
Preference number: 5 (lower is better) Translates to: SRHSPSTATGLQTRF*AIWQVGSEMIVQAS Trigger: GGAAGCCTGTACGATCATCTCCGACCCCACCTGCCAGATCGCCCAGAACCGGGTCTGCAGCCCTGTGGCTGTGGATGGGCTGTGCCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS GCA 90 bp | CATCCATGGGGGCGAGGGAAGGGCCTCCTGTCCGGGAACCTGAGATaGTGGCTTCGGCTGGTGCCATCTTCCCAGTCACCATCATCTGCC | + |
Preference number: 5 (lower is better) Translates to: HPWGRGKGLLSGNLR*WLRLVPSSQSPSSA Trigger: GGCAGATGATGGTGACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTCAGGTTCCCGGACAGGAGGCCCTTCCCTCGCCCCCATGGATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS TCA 90 bp | TCTTCCATCCATGGGGGCGAGGGAAGGGCCTCCTGTCCGGGAACCTaGGATGCTGGCTTCGGCTGGTGCCATCTTCCCAGTCACCATCAT | + |
Preference number: 5 (lower is better) Translates to: SSIHGGEGRASCPGT*DAGFGWCHLPSHHH Trigger: ATGATGGTGACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTCAGGTTCCCGGACAGGAGGCCCTTCCCTCGCCCCCATGGATGGAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS-3UTR CAA 90 bp | GCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCACAAACAGGCCAGTGTaGTCCCCAAAGTTCCACTTG | + |
Preference number: 5 (lower is better) Translates to: ALGSLAVGLSRRHRVFSSTNRPV*SPKFHL Trigger: CAAGTGGAACTTTGGGGACAACACTGGCCTGTTTGT...GCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS CCA 90 bp | GCCGATGGAGATCAGGACACCATTCACTGCTCTCAGAGGGGAGTCTaGGTCTTTGCCAGGGATAGAGATCAGGGTGCTGGTGAGGGCCAG | + |
Preference number: 5 (lower is better) Translates to: ADGDQDTIHCSQRGV*VFARDRDQGAGEGQ Trigger: CTGGCCCTCACCAGCACCCTGATCTCTATCCCTGGCAAAGACCCAGACTCCCCTCTGAGAGCAGTGAATGGTGTCCTGATCTCCATCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS TCA 90 bp | CACCAGGTTCACCACAAAAGTGATATTGGAACCCACCAGAGCCGGTaGGTCACTGGTCAGGACTGCCTGCACACGGCCTCCTTCCCAGGA | + |
Preference number: 5 (lower is better) Translates to: HQVHHKSDIGTHQSR*VTGQDCLHTASFPG Trigger: TCCTGGGAAGGAGGCCGTGTGCAGGCAGTCCTGACCAGTGACTCACCGGCTCTGGTGGGTTCCAATATCACTTTTGTGGTGAACCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS TCA 90 bp | AATGGATCCTTCTCCTGGTCTCCTCGGAAGAACGGGGCTTTCGCGTaGCTGAGGAGAACACTCAGGCCCTTGCCCTTGACCGTGTTCCTG | + |
Preference number: 5 (lower is better) Translates to: NGSFSWSPRKNGAFA*LRRTLRPLPLTVFL Trigger: CAGGAACACGGTCAAGGGCAAGGGCCTGAGTGTTCTCCTCAGTCACGCGAAAGCCCCGTTCTTCCGAGGAGACCAGGAGAAGGATCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CAA 90 bp | CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCAAGTCCATCAGGGAGTaGGCAGGCTGCGGTGTGGGC | + |
Preference number: 5 (lower is better) Translates to: PVDLSKEVIPSPALLILVKSIRE*AGCGVG Trigger: GCCCACACCGCAGCCTGCCAACTCCCTGATGGACTT...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CAA 90 bp | TCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCCTACGCCTTGTGTTTTTaGTACAGCAAGATGGTAACC | + |
Preference number: 5 (lower is better) Translates to: SGLLGCGAVPQAQGVQQPYALCF*YSKMVT Trigger: GGTTACCATCTTGCTGTACAAAAAACACAAGGCGTA...GGGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CAA 90 bp | TCACGAAATCCGCGGACTTCCTTCTCTGGAACCCATATGGCAGAAGGAAAGCAGTGTGCCCGTCCCTGCTaGGCAGCCTGGAGAGGCAGT | + |
Preference number: 5 (lower is better) Translates to: SRNPRTSFSGTHMAEGKQCARPC*AAWRGS Trigger: ACTGCCTCTCCAGGCTGCCAAGCAGGGACGGGCACA...CTGCTTTCCTTCTGCCATATGGGTTCCAGAGAAGGAAGTCCGCGGATTTCGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203757.2 |
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CDS GCA 90 bp | GAGATGCTGGCTTCGGCTGGTGCCATCTTCCCAGTCACCATCATCTaGCCCTGCAGTCCAGTTGTAGACATGCAGGTCAGATGTCAGTCC | + |
Preference number: 5 (lower is better) Translates to: EMLASAGAIFPVTII*PCSPVVDMQVRCQS Trigger: GGACTGACATCTGACCTGCATGTCTACAACTGGACTGCAGGGGCAGATGATGGTGACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS GCA 90 bp | GACAAGCACAGCCAGGCAGCCGATGGAGATCAGGACACCATTCACTaGTCTCAGAGGGGAGTCTGGGTCTTTGCCAGGGATAGAGATCAG | + |
Preference number: 5 (lower is better) Translates to: DKHSQAADGDQDTIH*SQRGVWVFARDRDQ Trigger: CTGATCTCTATCCCTGGCAAAGACCCAGACTCCCCTCTGAGAGCAGTGAATGGTGTCCTGATCTCCATCGGCTGCCTGGCTGTGCTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS GCA 90 bp | GTCCATCAGGGAGTTGGCAGGCTGCGGTGTGGGCATGGGGACATCTaGTATCTGCATGATGCTGACTTCCAGGATCCCCTCTACAATTGT | + |
Preference number: 5 (lower is better) Translates to: VHQGVGRLRCGHGDI*YLHDADFQDPLYNC Trigger: ACAATTGTAGAGGGGATCCTGGAAGTCAGCATCATGCAGATAGCAGATGTCCCCATGCCCACACCGCAGCCTGCCAACTCCCTGATGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS GCA 90 bp | GTCTTTGCCAGGGATAGAGATCAGGGTGCTGGTGAGGGCCAGGCTTaGATCATCTCCCAGAGTGAAATTCACACAGTAGGTGCCAGACCC | + |
Preference number: 5 (lower is better) Translates to: VFARDRDQGAGEGQA*IISQSEIHTVGARP Trigger: GGGTCTGGCACCTACTGTGTGAATTTCACTCTGGGAGATGATGCAAGCCTGGCCCTCACCAGCACCCTGATCTCTATCCCTGGCAAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS TCA 90 bp | ATGTATGCCCGGCCGTATCTTCGAAAGACAGTCACTTCCATGACCTaGGGGCCAGCTGTCAAGTTGACTGTGTTTATAGAAACCCGTGCT | + |
Preference number: 5 (lower is better) Translates to: MYARPYLRKTVTSMT*GPAVKLTVFIETRA Trigger: AGCACGGGTTTCTATAAACACAGTCAACTTGACAGCTGGCCCTCAGGTCATGGAAGTGACTGTCTTTCGAAGATACGGCCGGGCATACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS TCA 90 bp | TTTTCATCCGAAGACCAGCCACGTAATTGGTTGTGCTCTCTCATGTaGTCGGGATACTGTTCATGGCCCAGCACATCACGAAATCGCTTG | + |
Preference number: 5 (lower is better) Translates to: FSSEDQPRNWLCSLM*SGYCSWPSTSRNRL Trigger: CAAGCGATTTCGTGATGTGCTGGGCCATGAACAGTATCCCGATCACATGAGAGAGCACAACCAATTACGTGGCTGGTCTTCGGATGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS-3UTR CAA 90 bp | TCTCAGCCAACATCAATCAAGCCATCCCTGTCTCTTAGGCTATTTCTTCCATTCACATCACGAAATCGCTaGGCAGCCTGGAGAGGCAGT | + |
Preference number: 5 (lower is better) Translates to: SQPTSIKPSLSLRLFLPFTSRNR*AAWRGS Trigger: ACTGCCTCTCCAGGCTGCCAAGCGATTTCGTGATGT...GAATGGAAGAAATAGCCTAAGAGACAGGGATGGCTTGATTGATGTTGGCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CAA 90 bp | GGTCCTCCACAATGCCTCAAAAATGAGCAGTCATTCTATAATACCATCATATTTGAGGTGAGGGCGGAGTaGAAGGTGGAGGCGGAGTCG | + |
Preference number: 5 (lower is better) Translates to: GPPQCLKNEQSFYNTIIFEVRAE*KVEAES Trigger: CGACTCCGCCTCCACCTTCAACTCCGCCCTCACCTC...AAATATGATGGTATTATAGAATGACTGCTCATTTTTGAGGCATTGTGGAGGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CAA 90 bp | CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATGAGGTGAGGGCGGAGTaGAAGGTGGAGGCGGAGTCG | + |
Preference number: 5 (lower is better) Translates to: QALTNGIIKQFHCTNVRHEVRAE*KVEAES Trigger: CGACTCCGCCTCCACCTTCAACTCCGCCCTCACCTC...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CAA 90 bp | CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCAAAGTCCATCAGGGAGTaGGCAGGCTGCGGTGTGGGC | + |
Preference number: 5 (lower is better) Translates to: LHFYMIIPEVYSHLYLLSKSIRE*AGCGVG Trigger: GCCCACACCGCAGCCTGCCAACTCCCTGATGGACTT...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CAA 90 bp | AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCATGGGGGTGGCCCCTTaGCAGGTCACAGTGAAGTCC | + |
Preference number: 5 (lower is better) Translates to: RWISVSSRQPGLHSKFKVMGVAP*QVTVKS Trigger: GGACTTCACTGTGACCTGCAAAGGGGCCACCCCCAT...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS TCA 90 bp | CTGAGGGCCAGCTGTCAAGTTGACTGTGTTTATAGAAACCCGTGCTaGACACCGACCCAGTTTTTGGAAATACTGGCCAAGTGTGTGAAA | + |
Preference number: 5 (lower is better) Translates to: LRASCQVDCVYRNPC*TPTQFLEILAKCVK Trigger: TTTCACACACTTGGCCAGTATTTCCAAAAACTGGGTCGGTGTTCAGCACGGGTTTCTATAAACACAGTCAACTTGACAGCTGGCCCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS GCA 90 bp | ATCTGTTATCACATACACATCTTTCACCTTCGAGATGGGAATGTATaGCCGGCCGTATCTTCGAAAGACAGTCACTTCCATGACCTGAGG | + |
Preference number: 5 (lower is better) Translates to: ICYHIHIFHLRDGNV*PAVSSKDSHFHDLR Trigger: CCTCAGGTCATGGAAGTGACTGTCTTTCGAAGATACGGCCGGGCATACATTCCCATCTCGAAGGTGAAAGATGTGTATGTGATAACAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CCA 90 bp | CAGGGATCTGATCTGTTATCACATACACATCTTTCACCTTCGAGATaGGAATGTATGCCCGGCCGTATCTTCGAAAGACAGTCACTTCCA | + |
Preference number: 5 (lower is better) Translates to: QGSDLLSHTHLSPSR*ECMPGRIFERQSLP Trigger: TGGAAGTGACTGTCTTTCGAAGATACGGCCGGGCATACATTCCCATCTCGAAGGTGAAAGATGTGTATGTGATAACAGATCAGATCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS-3UTR CAA 90 bp | AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCACATCACGAAATCGCTaGGCAGCCTGGAGAGGCAGT | + |
Preference number: 5 (lower is better) Translates to: RWISVSSRQPGLHSKFKVTSRNR*AAWRGS Trigger: ACTGCCTCTCCAGGCTGCCAAGCGATTTCGTGATGT...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CAA 90 bp | GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTCCCGGGCACTGCAGTTaGCACGGTGAGGTTAAGGTT | + |
Preference number: 5 (lower is better) Translates to: ETLSLPMSSLKCYLTTLPPGHCS*HGEVKV Trigger: AACCTTAACCTCACCGTGCAAACTGCAGTGCCCGGG...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CAA 90 bp | AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCGAAATGGCAGAGTCGTaGAGGAAGTGGCTGGGATCA | + |
Preference number: 5 (lower is better) Translates to: RWISVSSRQPGLHSKFKVEMAES*RKWLGS Trigger: TGATCCCAGCCACTTCCTCAACGACTCTGCCATTTC...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS-3UTR CAA 90 bp | CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATCCCGGGCACTGCAGTTaGCACGGTGAGGTTAAGGTT | + |
Preference number: 5 (lower is better) Translates to: QALTNGIIKQFHCTNVRHPGHCS*HGEVKV Trigger: AACCTTAACCTCACCGTGCAAACTGCAGTGCCCGGG...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS TCA 90 bp | AAGTTCCTGTCATTCTTCTGGGACATGGTCACGAATACAGGGATCTaGTCTGTTATCACATACACATCTTTCACCTTCGAGATGGGAATG | + |
Preference number: 5 (lower is better) Translates to: KFLSFFWDMVTNTGI*SVITYTSFTFEMGM Trigger: CATTCCCATCTCGAAGGTGAAAGATGTGTATGTGATAACAGATCAGATCCCTGTATTCGTGACCATGTCCCAGAAGAATGACAGGAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS-3UTR CAA 90 bp | GGTCCTCCACAATGCCTCAAAAATGAGCAGTCATTCTATAATACCATCATATTTGAAATGGCAGAGTCGTaGAGGAAGTGGCTGGGATCA | + |
Preference number: 5 (lower is better) Translates to: GPPQCLKNEQSFYNTIIFEMAES*RKWLGS Trigger: TGATCCCAGCCACTTCCTCAACGACTCTGCCATTTC...AAATATGATGGTATTATAGAATGACTGCTCATTTTTGAGGCATTGTGGAGGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CAA 90 bp | GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTACGGTGAGGTTAAGGTaGAAGGTTCCATTGAGCACA | + |
Preference number: 5 (lower is better) Translates to: ETLSLPMSSLKCYLTTLPTVRLR*KVPLST Trigger: TGTGCTCAATGGAACCTTCAACCTTAACCTCACCGT...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS-3UTR CAA 90 bp | AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACAACGGTGAGGTTAAGGTaGAAGGTTCCATTGAGCACA | + |
Preference number: 5 (lower is better) Translates to: RSSICTCVTYSKDLQIFTTVRLR*KVPLST Trigger: TGTGCTCAATGGAACCTTCAACCTTAACCTCACCGT...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204260.2 |
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CDS TCA 72 bp | CATGGGGGCGAGGGAAGGGCCTCCTGTCCGGGAACCTaGGATGCTGGCTTCGGCTGGTGCCATCTTCCCAGT | + |
Preference number: 6 (lower is better) Translates to: HGGEGRASCPGT*DAGFGWCHLPS Trigger: ACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTCAGGTTCCCGGACAGGAGGCCCTTCCCTCGCCCCCATG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS GCA 72 bp | GGGCGAGGGAAGGGCCTCCTGTCCGGGAACCTGAGATaGTGGCTTCGGCTGGTGCCATCTTCCCAGTCACCA | + |
Preference number: 6 (lower is better) Translates to: GRGKGLLSGNLR*WLRLVPSSQSP Trigger: TGGTGACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTCAGGTTCCCGGACAGGAGGCCCTTCCCTCGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CCA 72 bp | ACAGCCACAGGGCTGCAGACCCGGTTCTGGGCGATCTaGCAGGTGGGGTCGGAGATGATCGTACAGGCTTCC | + |
Preference number: 6 (lower is better) Translates to: TATGLQTRFWAI*QVGSEMIVQAS Trigger: GGAAGCCTGTACGATCATCTCCGACCCCACCTGCCAGATCGCCCAGAACCGGGTCTGCAGCCCTGTGGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CCA 72 bp | TCCACTGACCTCCACACATGTGTGCCCGTCCCTGCTTaGCAGCCTGGAGAGGCAGTCCTGCAGCCAGCAGCA | + |
Preference number: 6 (lower is better) Translates to: STDLHTCVPVPA*QPGEAVLQPAA Trigger: TGCTGCTGGCTGCAGGACTGCCTCTCCAGGCTGCCAAGCAGGGACGGGCACACATGTGTGGAGGTCAGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203757.2 |
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CDS CCA 72 bp | CGAGGGAAGGGCCTCCTGTCCGGGAACCTGAGATGCTaGCTTCGGCTGGTGCCATCTTCCCAGTCACCATCA | + |
Preference number: 6 (lower is better) Translates to: RGKGLLSGNLRC*LRLVPSSQSPS Trigger: TGATGGTGACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTCAGGTTCCCGGACAGGAGGCCCTTCCCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS GCA 72 bp | GGCGAAGGGGGAGGGCATGGCCCGGGCACTGCAGTTTaGACGGTGAGGTTAAGGTTGAAGGTTCCATTGAGC | + |
Preference number: 6 (lower is better) Translates to: GEGGGHGPGTAV*TVRLRLKVPLS Trigger: GCTCAATGGAACCTTCAACCTTAACCTCACCGTGCAAACTGCAGTGCCCGGGCCATGCCCTCCCCCTTCGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CAA 72 bp | GCCCCTTTGCAGGTCACAGTGAAGTCCATCAGGGAGTaGGCAGGCTGCGGTGTGGGCATGGGGACATCTGCT | + |
Preference number: 6 (lower is better) Translates to: APLQVTVKSIRE*AGCGVGMGTSA Trigger: AGCAGATGTCCCCATGCCCACACCGCAGCCTGCCAACTCCCTGATGGACTTCACTGTGACCTGCAAAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS TCA 72 bp | TTCTCCTGGTCTCCTCGGAAGAACGGGGCTTTCGCGTaGCTGAGGAGAACACTCAGGCCCTTGCCCTTGACC | + |
Preference number: 6 (lower is better) Translates to: FSWSPRKNGAFA*LRRTLRPLPLT Trigger: GGTCAAGGGCAAGGGCCTGAGTGTTCTCCTCAGTCACGCGAAAGCCCCGTTCTTCCGAGGAGACCAGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS GCA 72 bp | GGAGTTGGCAGGCTGCGGTGTGGGCATGGGGACATCTaGTATCTGCATGATGCTGACTTCCAGGATCCCCTC | + |
Preference number: 6 (lower is better) Translates to: GVGRLRCGHGDI*YLHDADFQDPL Trigger: GAGGGGATCCTGGAAGTCAGCATCATGCAGATAGCAGATGTCCCCATGCCCACACCGCAGCCTGCCAACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CAA 72 bp | GGATACTGTTCATGGCCCAGCACATCACGAAATCGCTaGGCAGCCTGGAGAGGCAGTCCTGCAGCCAGCAGC | + |
Preference number: 6 (lower is better) Translates to: GYCSWPSTSRNR*AAWRGSPAASS Trigger: GCTGCTGGCTGCAGGACTGCCTCTCCAGGCTGCCAAGCGATTTCGTGATGTGCTGGGCCATGAACAGTATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CAA 72 bp | AGGCGAAGGGGGAGGGCATGGCCCGGGCACTGCAGTTaGCACGGTGAGGTTAAGGTTGAAGGTTCCATTGAG | + |
Preference number: 6 (lower is better) Translates to: RRRGRAWPGHCS*HGEVKVEGSIE Trigger: CTCAATGGAACCTTCAACCTTAACCTCACCGTGCAAACTGCAGTGCCCGGGCCATGCCCTCCCCCTTCGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CAA 90 bp | CGGAGTCGAAGGCGAAGGGGGAGGGCATGGCCCGGGCACTGCAGTTaGCACGGTGAGGTTAAGGTTGAAGGTTCCATTGAGCACATAAGT | + |
Preference number: 6 (lower is better) Translates to: RSRRRRGRAWPGHCS*HGEVKVEGSIEHIS Trigger: ACTTATGTGCTCAATGGAACCTTCAACCTTAACCTCACCGTGCAAACTGCAGTGCCCGGGCCATGCCCTCCCCCTTCGCCTTCGACTCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS TCA 72 bp | CACCACAAAAGTGATATTGGAACCCACCAGAGCCGGTaGGTCACTGGTCAGGACTGCCTGCACACGGCCTCC | + |
Preference number: 6 (lower is better) Translates to: HHKSDIGTHQSR*VTGQDCLHTAS Trigger: GGAGGCCGTGTGCAGGCAGTCCTGACCAGTGACTCACCGGCTCTGGTGGGTTCCAATATCACTTTTGTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS GCA 72 bp | AGCCAGGCAGCCGATGGAGATCAGGACACCATTCACTaGTCTCAGAGGGGAGTCTGGGTCTTTGCCAGGGAT | + |
Preference number: 6 (lower is better) Translates to: SQAADGDQDTIH*SQRGVWVFARD Trigger: ATCCCTGGCAAAGACCCAGACTCCCCTCTGAGAGCAGTGAATGGTGTCCTGATCTCCATCGGCTGCCTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CCA 72 bp | GATACTGTTCATGGCCCAGCACATCACGAAATCGCTTaGCAGCCTGGAGAGGCAGTCCTGCAGCCAGCAGCA | + |
Preference number: 6 (lower is better) Translates to: DTVHGPAHHEIA*QPGEAVLQPAA Trigger: TGCTGCTGGCTGCAGGACTGCCTCTCCAGGCTGCCAAGCGATTTCGTGATGTGCTGGGCCATGAACAGTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CAA 72 bp | ACACCATTCACTGCTCTCAGAGGGGAGTCTGGGTCTTaGCCAGGGATAGAGATCAGGGTGCTGGTGAGGGCC | + |
Preference number: 6 (lower is better) Translates to: TPFTALRGESGS*PGIEIRVLVRA Trigger: GGCCCTCACCAGCACCCTGATCTCTATCCCTGGCAAAGACCCAGACTCCCCTCTGAGAGCAGTGAATGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS GCA 72 bp | GCTTCGGCTGGTGCCATCTTCCCAGTCACCATCATCTaGCCCTGCAGTCCAGTTGTAGACATGCAGGTCAGA | + |
Preference number: 6 (lower is better) Translates to: ASAGAIFPVTII*PCSPVVDMQVR Trigger: TCTGACCTGCATGTCTACAACTGGACTGCAGGGGCAGATGATGGTGACTGGGAAGATGGCACCAGCCGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS TCA 72 bp | TCTGGCATCTGGGGAACACCAGGTTCACCACAAAAGTaGTATTGGAACCCACCAGAGCCGGTGAGTCACTGG | + |
Preference number: 6 (lower is better) Translates to: SGIWGTPGSPQK*YWNPPEPVSHW Trigger: CCAGTGACTCACCGGCTCTGGTGGGTTCCAATATCACTTTTGTGGTGAACCTGGTGTTCCCCAGATGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CAA 72 bp | CATCTGGGGAACACCAGGTTCACCACAAAAGTGATATaGGAACCCACCAGAGCCGGTGAGTCACTGGTCAGG | + |
Preference number: 6 (lower is better) Translates to: HLGNTRFTTKVI*EPTRAGESLVR Trigger: CCTGACCAGTGACTCACCGGCTCTGGTGGGTTCCAATATCACTTTTGTGGTGAACCTGGTGTTCCCCAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS TCA 72 bp | GAAATGGCAGAGTCGTTGAGGAAGTGGCTGGGATCATaGATGAGGACATCGAAGACGATGGGGAGGTCTCTG | + |
Preference number: 6 (lower is better) Translates to: EMAESLRKWLGS*MRTSKTMGRSL Trigger: CAGAGACCTCCCCATCGTCTTCGATGTCCTCATTCATGATCCCAGCCACTTCCTCAACGACTCTGCCATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS GCA 72 bp | AGGGATAGAGATCAGGGTGCTGGTGAGGGCCAGGCTTaGATCATCTCCCAGAGTGAAATTCACACAGTAGGT | + |
Preference number: 6 (lower is better) Translates to: RDRDQGAGEGQA*IISQSEIHTVG Trigger: ACCTACTGTGTGAATTTCACTCTGGGAGATGATGCAAGCCTGGCCCTCACCAGCACCCTGATCTCTATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS TCA 72 bp | CGGCCGTATCTTCGAAAGACAGTCACTTCCATGACCTaGGGGCCAGCTGTCAAGTTGACTGTGTTTATAGAA | + |
Preference number: 6 (lower is better) Translates to: RPYLRKTVTSMT*GPAVKLTVFIE Trigger: TTCTATAAACACAGTCAACTTGACAGCTGGCCCTCAGGTCATGGAAGTGACTGTCTTTCGAAGATACGGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS GCA 72 bp | CACATACACATCTTTCACCTTCGAGATGGGAATGTATaGCCGGCCGTATCTTCGAAAGACAGTCACTTCCAT | + |
Preference number: 6 (lower is better) Translates to: HIHIFHLRDGNV*PAVSSKDSHFH Trigger: ATGGAAGTGACTGTCTTTCGAAGATACGGCCGGGCATACATTCCCATCTCGAAGGTGAAAGATGTGTATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS TCA 72 bp | AGCTGTCAAGTTGACTGTGTTTATAGAAACCCGTGCTaGACACCGACCCAGTTTTTGGAAATACTGGCCAAG | + |
Preference number: 6 (lower is better) Translates to: SCQVDCVYRNPC*TPTQFLEILAK Trigger: CTTGGCCAGTATTTCCAAAAACTGGGTCGGTGTTCAGCACGGGTTTCTATAAACACAGTCAACTTGACAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CCA 72 bp | GATCTGTTATCACATACACATCTTTCACCTTCGAGATaGGAATGTATGCCCGGCCGTATCTTCGAAAGACAG | + |
Preference number: 6 (lower is better) Translates to: DLLSHTHLSPSR*ECMPGRIFERQ Trigger: CTGTCTTTCGAAGATACGGCCGGGCATACATTCCCATCTCGAAGGTGAAAGATGTGTATGTGATAACAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CAA 72 bp | GGGCAGTTTCCTATTGGCTTGTACGCCTTGTGTTTTTaGTACAGCAAGATGGTAACCATGGTGACAAGCACA | + |
Preference number: 6 (lower is better) Translates to: GQFPIGLYALCF*YSKMVTMVTST Trigger: TGTGCTTGTCACCATGGTTACCATCTTGCTGTACAAAAAACACAAGGCGTACAAGCCAATAGGAAACTGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031840.10 |
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CDS TCA 72 bp | TCATTCTTCTGGGACATGGTCACGAATACAGGGATCTaGTCTGTTATCACATACACATCTTTCACCTTCGAG | + |
Preference number: 6 (lower is better) Translates to: SFFWDMVTNTGI*SVITYTSFTFE Trigger: CTCGAAGGTGAAAGATGTGTATGTGATAACAGATCAGATCCCTGTATTCGTGACCATGTCCCAGAAGAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |
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CDS CCA 72 bp | TCTCATCAGACAAGTTCCTGTCATTCTTCTGGGACATaGTCACGAATACAGGGATCTGATCTGTTATCACAT | + |
Preference number: 6 (lower is better) Translates to: SHQTSSCHSSGT*SRIQGSDLLSH Trigger: ATGTGATAACAGATCAGATCCCTGTATTCGTGACCATGTCCCAGAAGAATGACAGGAACTTGTCTGATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031840.10 ENSMUST00000204260.2 |