RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPNMB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029816

Ensembl transcript IDs: ENSMUST00000031840.10, ENSMUST00000203757.2, ENSMUST00000204260.2

Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGGATGCCTGTGCCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTaGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCCTG +
Preference number: 1 (lower is better)
Translates to: LGCLCPGLLQLLWAP*LWGCPAGTGCSAAL
Trigger: CAGGGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CCA 90 bp AGGCTGCTGTTGGGATGCCTGTGCCCAGGACTCCTTCAGTTGCTCTaGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCA +
Preference number: 1 (lower is better)
Translates to: RLLLGCLCPGLLQLL*APWLWGCPAGTGCS
Trigger: TGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR GCA 90 bp ATACAAGGCTGCTGTTGGGATGCCTGTGCCCAGGACTCCTTCAGTTaGTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGT +
Preference number: 1 (lower is better)
Translates to: IQGCCWDACAQDSFS*SGLLGCGAVPQAQG
Trigger: ACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAGCCTTGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR GCA 90 bp ATGTCAGGGCTCGGTTCAGATACAAGGCTGCTGTTGGGATGCCTGTaGCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTGGGGC +
Preference number: 1 (lower is better)
Translates to: MSGLGSDTRLLLGCL*PGLLQLLWAPWLWG
Trigger: GCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAGCCTTGTATCTGAACCGAGCCCTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR TCA 90 bp GCTTTGGTGGCTGTTCTGTATCTGCTGTTCTCTGCTGCCCCCTGTTaGCCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCT +
Preference number: 1 (lower is better)
Translates to: ALVAVLYLLFSAAPC*PEQGSDPKPSLAHS
Trigger: AGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGGGGGCAGCAGAGAACAGCAGATACAGAACAGCCACCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR TCA 90 bp GCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTAGCGGCCATGTaGAGTGAGTCAGAGAGGGACAGCATACCCCTTCTACAGCTGAGA +
Preference number: 1 (lower is better)
Translates to: AVPALILPSGAVAAM*SESERDSIPLLQLR
Trigger: TCTCAGCTGTAGAAGGGGTATGCTGTCCCTCTCTGACTCACTTCACATGGCCGCTACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR TCA 90 bp TTTTCATCCGAAGACCAGCCACGTAATTGGTTGTGCTCTCTCATGTaGTCGGGATACTGTTCATGGCCCAGCACATCACGAAATCCGCGG +
Preference number: 1 (lower is better)
Translates to: FSSEDQPRNWLCSLM*SGYCSWPSTSRNPR
Trigger: CCGCGGATTTCGTGATGTGCTGGGCCATGAACAGTATCCCGATCACATGAGAGAGCACAACCAATTACGTGGCTGGTCTTCGGATGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203757.2
3UTR GCA 90 bp ATAAACAAAGTCATGGACCTGCCGCTTTGGTGGCTGTTCTGTATCTaGTGTTCTCTGCTGCCCCCTGTTGACCTGAGCAAGGAAGTGATC +
Preference number: 1 (lower is better)
Translates to: INKVMDLPLWWLFCI*CSLLPPVDLSKEVI
Trigger: GATCACTTCCTTGCTCAGGTCAACAGGGGGCAGCAGAGAACAGCAGATACAGAACAGCCACCAAAGCGGCAGGTCCATGACTTTGTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR TCA 90 bp TTGAGTTCCCGTCCCTTCTTCTTCAGTTCCATTTCCCCGTGGGTATaGAGTTGGTCTTTCTTGCCATGTTTGCCATCTGTCCTGCATTTC +
Preference number: 1 (lower is better)
Translates to: LSSRPFFFSSISPWV*SWSFLPCLPSVLHF
Trigger: GAAATGCAGGACAGATGGCAAACATGGCAAGAAAGACCAACTTCATACCCACGGGGAAATGGAACTGAAGAAGAAGGGACGGGAACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
3UTR CCA 90 bp CAGCAGAATAAGGATTCTCTGTTGGTTTCTCAGAAATCCAAATTATaGGGTCCCACCTCCACAAGACAGTGTTTGGAACCATGGGGTGGA +
Preference number: 1 (lower is better)
Translates to: QQNKDSLLVSQKSKL*GPTSTRQCLEPWGG
Trigger: TCCACCCCATGGTTCCAAACACTGTCTTGTGGAGGTGGGACCCCATAATTTGGATTTCTGAGAAACCAACAGAGAATCCTTATTCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CCA 90 bp TCTCATAGGTCAAGTGCAGCCCACCACATGCTTTATAAGTGTCCATaGATAAATGAATGGATGGGTAGTTCACTGAACTACACAGGGAAA +
Preference number: 1 (lower is better)
Translates to: SHRSSAAHHMLYKCP*INEWMGSSLNYTGK
Trigger: TTTCCCTGTGTAGTTCAGTGAACTACCCATCCATTCATTTATCCATGGACACTTATAAAGCATGTGGTGGGCTGCACTTGACCTATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR GCA 90 bp ACATCAATCAAGCCATCCCTGTCTCTTAGGCTATTTCTTCCATTCTaGAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATAAATCGA +
Preference number: 1 (lower is better)
Translates to: TSIKPSLSLRLFLPF*RQFPYQGHLENINR
Trigger: TCGATTTATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCCTAAGAGACAGGGATGGCTTGATTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR TCA 90 bp GTTGGTCTTTCTTGCCATGTTTGCCATCTGTCCTGCATTTCTACATaGTCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCAAGAA +
Preference number: 1 (lower is better)
Translates to: VGLSCHVCHLSCIST*SSQRCILTCICCQE
Trigger: TTCTTGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAGGACAGATGGCAAACATGGCAAGAAAGACCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
3UTR CCA 90 bp ATCATATTTATCCAGTTGTCTACCTTCATCAAGGTAGATACAGTCTaGACTCTCAGATCTCACTTGGTTGCTATTAAGGGTCTGCTGGTA +
Preference number: 1 (lower is better)
Translates to: IIFIQLSTFIKVDTV*TLRSHLVAIKGLLV
Trigger: TACCAGCAGACCCTTAATAGCAACCAAGTGAGATCTGAGAGTCCAGACTGTATCTACCTTGATGAAGGTAGACAACTGGATAAATATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR GCA 90 bp TACAGATGGGAAGAAACACTAAGTCTTCCCATGTCTTCTCTAAAATaGTATTTAACCACACTCCCTAAGCCACGATATACATTTTACAAT +
Preference number: 1 (lower is better)
Translates to: YRWEETLSLPMSSLK*YLTTLPKPRYTFYN
Trigger: ATTGTAAAATGTATATCGTGGCTTAGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTCTTCCCATCTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR TCA 90 bp AAGGAAATCAATATAGTTTACATTGCCAGCTGTAGAAACAGGCTCTaGCAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGAC +
Preference number: 1 (lower is better)
Translates to: KEINIVYIASCRNRL*QMASLSNFIVQMSD
Trigger: GTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTGTTTCTACAGCTGGCAATGTAAACTATATTGATTTCCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
3UTR CAA 90 bp GTTGGGATGCCTGTGCCCAGGACTCCTTCAGTTGCTCTGGGCTCCTaGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCCT +
Preference number: 2 (lower is better)
Translates to: VGMPVPRTPSVALGS*AVGLSRRHRVFSSP
Trigger: AGGGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR TCA 90 bp TCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCCATGGCCTTCAGGTGGTaGTTAGCTGGGTTCATGCCC +
Preference number: 2 (lower is better)
Translates to: SGLLGCGAVPQAQGVQQPMAFRW*LAGFMP
Trigger: GGGCATGAACCCAGCTAATCACCACCTGAAGGCCAT...GGGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR TCA 90 bp GCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCGAGTTGGAAGGCAGATaGAGCATGGCCTTCAGGTGG +
Preference number: 2 (lower is better)
Translates to: ALGSLAVGLSRRHRVFSSELEGR*SMAFRW
Trigger: CCACCTGAAGGCCATGCTTCATCTGCCTTCCAACTC...GCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR TCA 90 bp GCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCTCAGGCATGCTCAGTaGGTTGGAAGGCAGATGAAG +
Preference number: 2 (lower is better)
Translates to: ALGSLAVGLSRRHRVFSSLRHAQ*VGRQMK
Trigger: CTTCATCTGCCTTCCAACTCACTGAGCATGCCTGAG...GCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CCA 90 bp TCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCCCATGCCCATGTTATGTaGAAAGCTGAGGCATCTGTG +
Preference number: 2 (lower is better)
Translates to: SGLLGCGAVPQAQGVQQPHAHVM*KAEASV
Trigger: CACAGATGCCTCAGCTTTCCACATAACATGGGCATG...GGGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR GCA 90 bp CCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGAATCTCTCCAAACATTaGCAAACACTCCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: PRTPSVALGSLAVGLSRRNLSKH*QTLLAE
Trigger: CTCAGCCAGGAGTGTTTGGCAATGTTTGGAGAGATT...CCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CCA 90 bp CCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCTCTCAGATCTCACTTaGTTGCTATTAAGGGTCTGC +
Preference number: 2 (lower is better)
Translates to: PRTPSVALGSLAVGLSRRLSDLT*LLLRVC
Trigger: GCAGACCCTTAATAGCAACCAAGTGAGATCTGAGAG...CCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CCA 90 bp GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTTGGGCTCCTTGGCTGTaGGGCTGTCCCGCAGGCACA +
Preference number: 2 (lower is better)
Translates to: AETVTQGCTCTHSSIRSSWAPWL*GCPAGT
Trigger: TGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCA...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CCA 90 bp CTGCTGCCCCCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCCAGGTGGTGATTAGCTaGGTTCATGCCCATGTTATG +
Preference number: 2 (lower is better)
Translates to: LLPPVDLSKEVIPSPALLQVVIS*VHAHVM
Trigger: CATAACATGGGCATGAACCCAGCTAATCACCACCTG...GAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGGGGGCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CCA 90 bp CCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCCATGGATAAATGAATaGATGGGTAGTTCACTGAAC +
Preference number: 2 (lower is better)
Translates to: PRTPSVALGSLAVGLSRRPWINE*MGSSLN
Trigger: GTTCAGTGAACTACCCATCCATTCATTTATCCATGG...CCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CCA 90 bp CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCATACAAGGCTGCTGTTaGGATGCCTGTGCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: PVDLSKEVIPSPALLILVIQGCC*DACAQD
Trigger: GTCCTGGGCACAGGCATCCCAACAGCAGCCTTGTAT...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CCA 90 bp CTGCTGCCCCCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCAGGCCCTGTCCTAAGTaGTCAGCAATTTTTACATTC +
Preference number: 2 (lower is better)
Translates to: LLPPVDLSKEVIPSPALLRPCPK*SAIFTF
Trigger: GAATGTAAAAATTGCTGACCACTTAGGACAGGGCCT...GAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGGGGGCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CCA 90 bp CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCATTGCCAAACACTCCTaGCTGAGAGGCCCTGTCCTA +
Preference number: 2 (lower is better)
Translates to: PVDLSKEVIPSPALLILVIAKHS*LRGPVL
Trigger: TAGGACAGGGCCTCTCAGCCAGGAGTGTTTGGCAAT...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR GCA 90 bp CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCGCGGTCTGTGGATTCTaGAGCAACCTGAAATCAATG +
Preference number: 2 (lower is better)
Translates to: PVDLSKEVIPSPALLILVAVCGF*SNLKSM
Trigger: CATTGATTTCAGGTTGCTGCAGAATCCACAGACCGC...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR GCA 90 bp TGGTGCATGGCTCTAGTCCCACACTTGGGAGGCAGAGGTAGGTGGATTTCTGTGGAAGTTGGTCTTTCTTaGCATGTTTGCCATCTGTCC +
Preference number: 2 (lower is better)
Translates to: WCMALVPHLGGRGRWISVEVGLS*HVCHLS
Trigger: GGACAGATGGCAAACATGGCAAGAAAGACCAACTTC...CACAGAAATCCACCTACCTCTGCCTCCCAAGTGTGGGACTAGAGCCATGCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
3UTR-3UTR CCA 90 bp GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTACATGCACAGAAGAGTaGGTTCCTGGTCAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: AETVTQGCTCTHSSIRSSTCTEE*VPGQRE
Trigger: TTCCCTCTGACCAGGAACCCACTCTTCTGTGCATGT...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CCA 90 bp CTGCCGTCTCCCCTCCTCCACACTGGATACAGGTGTTCATCCCATTCATTTTCATCGGGATACTGTTCATaGCCCAGCACATCACGAAAT +
Preference number: 2 (lower is better)
Translates to: LPSPLLHTGYRCSSHSFSSGYCS*PSTSRN
Trigger: ATTTCGTGATGTGCTGGGCCATGAACAGTATCCCGA...TGAAAATGAATGGGATGAACACCTGTATCCAGTGTGGAGGAGGGGAGACGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203757.2
3UTR-3UTR TCA 90 bp CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCGGATGGGTAGTTCACTaGACTACACAGGGAAAATTT +
Preference number: 2 (lower is better)
Translates to: PVDLSKEVIPSPALLILVGWVVH*TTQGKF
Trigger: AAATTTTCCCTGTGTAGTTCAGTGAACTACCCATCC...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR TCA 90 bp TGCTCATTCTTGTCCTGGAACCAGCAGAATAAGGATTCTCTGTTGGTTTCTCAGAGCGGCCATGTGAAGTaGGTCAGAGAGGGACAGCAT +
Preference number: 2 (lower is better)
Translates to: CSFLSWNQQNKDSLLVSQSGHVK*VREGQH
Trigger: ATGCTGTCCCTCTCTGACTCACTTCACATGGCCGCT...CTGAGAAACCAACAGAGAATCCTTATTCTGCTGGTTCCAGGACAAGAATGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR TCA 90 bp CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCGATTCTGCAGCAACCTaGAATCAATGTCCTGTTTTG +
Preference number: 2 (lower is better)
Translates to: PVDLSKEVIPSPALLILVDSAAT*NQCPVL
Trigger: CAAAACAGGACATTGATTTCAGGTTGCTGCAGAATC...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR GCA 90 bp TGCTCATTCTTGTCCTGGAACCAGCAGAATAAGGATTCTCTGTTGGTTTCTCAGTCAGGAGCTCAGGCATaGTCAGTGAGTTGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: CSFLSWNQQNKDSLLVSQSGAQA*SVSWKA
Trigger: TGCCTTCCAACTCACTGAGCATGCCTGAGCTCCTGA...CTGAGAAACCAACAGAGAATCCTTATTCTGCTGGTTCCAGGACAAGAATGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR TCA 90 bp GGCTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATACCCCTTCTACAGCTaGGACAGAGGCAGAAAAGAC +
Preference number: 2 (lower is better)
Translates to: GYFFHSADSSLTRVTWKIYPFYS*DRGRKD
Trigger: GTCTTTTCTGCCTCTGTCTCAGCTGTAGAAGGGGTA...TATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR GCA 90 bp CCCACCCTAGTTTTGACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGCCAGCCACATACTTCTaGACAGCTCACATACATGCA +
Preference number: 2 (lower is better)
Translates to: PTLVLTTTNLSKHCQTLLPATYF*TAHIHA
Trigger: TGCATGTATGTGAGCTGTGCAGAAGTATGTGGCTGG...CAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGTCAAAACTAGGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CCA 90 bp ACAGGTGTTCATCCCATTCATTTTCATCCGAAGACCAGCCACGTAATTGGTTGTTCTCTGGAACCCATATaGCAGAAGGAAAGCAGCGAG +
Preference number: 2 (lower is better)
Translates to: TGVHPIHFHPKTSHVIGCSLEPI*QKESSE
Trigger: CTCGCTGCTTTCCTTCTGCCATATGGGTTCCAGAGA...ACAACCAATTACGTGGCTGGTCTTCGGATGAAAATGAATGGGATGAACACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203757.2
3UTR-3UTR GCA 90 bp CTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATATGGCTGTTCTGTATCTaGTGTTCTCTGCTGCCCCCT +
Preference number: 2 (lower is better)
Translates to: LFLPFCRQFPYQGHLENIWLFCI*CSLLPP
Trigger: AGGGGGCAGCAGAGAACAGCAGATACAGAACAGCCA...TATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CCA 90 bp GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTAGAAGAGTGGGTTCCTaGTCAGAGGGAAGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: ETLSLPMSSLKCYLTTLPRRVGS*SEGRPK
Trigger: CTTTGGCCTTCCCTCTGACCAGGAACCCACTCTTCT...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CCA 90 bp CTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATAAAGCTGAGGCATCTGTaGTATCTCCCCCAGTTAACC +
Preference number: 2 (lower is better)
Translates to: LFLPFCRQFPYQGHLENIKLRHL*YLPQLT
Trigger: GGTTAACTGGGGGAGATACCACAGATGCCTCAGCTT...TATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR GCA 90 bp CTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATACACAGCTCACATACATaGACAGAAGAGTGGGTTCCT +
Preference number: 2 (lower is better)
Translates to: LFLPFCRQFPYQGHLENIHSSHT*TEEWVP
Trigger: AGGAACCCACTCTTCTGTGCATGTATGTGAGCTGTG...TATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR GCA 90 bp AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCCTTCTGAGACCAACATaGAGACCTCACTTTATCCCC +
Preference number: 2 (lower is better)
Translates to: RWISVSSRQPGLHSKFKVLLRPT*RPHFIP
Trigger: GGGGATAAAGTGAGGTCTGCATGTTGGTCTCAGAAG...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
3UTR-3UTR CCA 90 bp GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTCTTTATAAGTGTCCATaGATAAATGAATGGATGGGT +
Preference number: 2 (lower is better)
Translates to: AETVTQGCTCTHSSIRSSLYKCP*INEWMG
Trigger: ACCCATCCATTCATTTATCCATGGACACTTATAAAG...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CCA 90 bp GGCTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATGCTCATTCTTGTCCTaGAACCAGCAGAATAAGGAT +
Preference number: 2 (lower is better)
Translates to: GYFFHSADSSLTRVTWKICSFLS*NQQNKD
Trigger: ATCCTTATTCTGCTGGTTCCAGGACAAGAATGAGCA...TATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR GCA 90 bp CTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATAGTTGGTCCTCCACAATaGCTCAAAAATGAGCAGTCA +
Preference number: 2 (lower is better)
Translates to: LFLPFCRQFPYQGHLENIVGPPQ*LKNEQS
Trigger: TGACTGCTCATTTTTGAGGCATTGTGGAGGACCAAC...TATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CAA 90 bp AGGCTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTaGGAAAATATAAATCGACACAATTTACTATTTCAGACTTCTTTC +
Preference number: 2 (lower is better)
Translates to: RLFLPFCRQFPYQGH*ENINRHNLLFQTSF
Trigger: GAAAGAAGTCTGAAATAGTAAATTGTGTCGATTTATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR TCA 90 bp AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACATCCTGCATTTCTACATaGTCATCCCAGAGGTGTATT +
Preference number: 2 (lower is better)
Translates to: RSSICTCVTYSKDLQIFTSCIST*SSQRCI
Trigger: AATACACCTCTGGGATGATCATGTAGAAATGCAGGA...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
3UTR-3UTR GCA 90 bp AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACACTTTCTTGCCATGTTTaGCATCTGTCCTGCATTTCT +
Preference number: 2 (lower is better)
Translates to: RSSICTCVTYSKDLQIFTLSCHV*HLSCIS
Trigger: AGAAATGCAGGACAGATGGCAAACATGGCAAGAAAG...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
3UTR CAA 90 bp TCTGTCCTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTaGTATTTGTTGTCAAGAATTATCTGCAAATGCTATAGAACTTTA +
Preference number: 2 (lower is better)
Translates to: SVLHFYMIIPEVYSH*YLLSRIICKCYRTL
Trigger: TAAAGTTCTATAGCATTTGCAGATAATTCTTGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAGGACAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
3UTR CCA 72 bp CCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTaGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCC +
Preference number: 3 (lower is better)
Translates to: PGLLQLLWAPWL*GCPAGTGCSAA
Trigger: GGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CCA 72 bp CTGTGCCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTaGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCA +
Preference number: 3 (lower is better)
Translates to: LCPGLLQLLWAP*LWGCPAGTGCS
Trigger: TGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CCA 72 bp TTGGGATGCCTGTGCCCAGGACTCCTTCAGTTGCTCTaGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACA +
Preference number: 3 (lower is better)
Translates to: LGCLCPGLLQLL*APWLWGCPAGT
Trigger: TGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CAA 90 bp TCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCCCACCCCACCCTAGTTTaGACAACCACAAATCTCTCC +
Preference number: 3 (lower is better)
Translates to: SGLLGCGAVPQAQGVQQPHPTLV*TTTNLS
Trigger: GGAGAGATTTGTGGTTGTCAAAACTAGGGTGGGGTG...GGGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CAA 90 bp CCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGACTCTCAGATCTCACTaGGTTGCTATTAAGGGTCTG +
Preference number: 3 (lower is better)
Translates to: PRTPSVALGSLAVGLSRRTLRSH*VAIKGL
Trigger: CAGACCCTTAATAGCAACCAAGTGAGATCTGAGAGT...CCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR GCA 72 bp TCAGGGCTCGGTTCAGATACAAGGCTGCTGTTGGGATaGCTGTGCCCAGGACTCCTTCAGTTGCTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: SGLGSDTRLLLG*LCPGLLQLLWA
Trigger: AGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAGCCTTGTATCTGAACCGAGCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CCA 72 bp AGATGTCAGGGCTCGGTTCAGATACAAGGCTGCTGTTaGGATGCCTGTGCCCAGGACTCCTTCAGTTGCTCT +
Preference number: 3 (lower is better)
Translates to: RCQGSVQIQGCC*DACAQDSFSCS
Trigger: AGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAGCCTTGTATCTGAACCGAGCCCTGACATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CCA 72 bp GCCCAGCACATCACGAAATCCGCGGACTTCCTTCTCTaGAACCCATATGGCAGAAGGAAAGCAGCGAGCGAT +
Preference number: 3 (lower is better)
Translates to: AQHITKSADFLL*NPYGRRKAASD
Trigger: ATCGCTCGCTGCTTTCCTTCTGCCATATGGGTTCCAGAGAAGGAAGTCCGCGGATTTCGTGATGTGCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203757.2
3UTR-3UTR CAA 90 bp GGCTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATAGTTGCTCTGGGCTCCTaGGCTGTGGGGCTGTCCCGC +
Preference number: 3 (lower is better)
Translates to: GYFFHSADSSLTRVTWKIVALGS*AVGLSR
Trigger: GCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAAC...TATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR GCA 72 bp GTTCCCAGCCACATACTTCTGCACAGCTCACATACATaGACAGAAGAGTGGGTTCCTGGTCAGAGGGAAGGC +
Preference number: 3 (lower is better)
Translates to: VPSHILLHSSHT*TEEWVPGQREG
Trigger: GCCTTCCCTCTGACCAGGAACCCACTCTTCTGTGCATGTATGTGAGCTGTGCAGAAGTATGTGGCTGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR GCA 72 bp AGCTTTAGATGTCAGGGCTCGGTTCAGATACAAGGCTaGTGTTGGGATGCCTGTGCCCAGGACTCCTTCAGT +
Preference number: 3 (lower is better)
Translates to: SFRCQGSVQIQG*CWDACAQDSFS
Trigger: ACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAGCCTTGTATCTGAACCGAGCCCTGACATCTAAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR GCA 72 bp TGTCCCCAGGCTGAGACTGTAACACAAGGCTGTACCTaGACTCATTCTTCCATCAGGAGCAGTAGCGGCCAT +
Preference number: 3 (lower is better)
Translates to: CPQAETVTQGCT*THSSIRSSSGH
Trigger: ATGGCCGCTACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGCCTGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR TCA 72 bp CATTCTTCCATCAGGAGCAGTAGCGGCCATGTGAAGTaGGTCAGAGAGGGACAGCATACCCCTTCTACAGCT +
Preference number: 3 (lower is better)
Translates to: HSSIRSSSGHVK*VREGQHTPSTA
Trigger: AGCTGTAGAAGGGGTATGCTGTCCCTCTCTGACTCACTTCACATGGCCGCTACTGCTCCTGATGGAAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR TCA 72 bp GCACTCATTCTTCCATCAGGAGCAGTAGCGGCCATGTaGAGTGAGTCAGAGAGGGACAGCATACCCCTTCTA +
Preference number: 3 (lower is better)
Translates to: ALILPSGAVAAM*SESERDSIPLL
Trigger: TAGAAGGGGTATGCTGTCCCTCTCTGACTCACTTCACATGGCCGCTACTGCTCCTGATGGAAGAATGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CCA 72 bp CAGGTGGTGATTAGCTGGGTTCATGCCCATGTTATGTaGAAAGCTGAGGCATCTGTGGTATCTCCCCCAGTT +
Preference number: 3 (lower is better)
Translates to: QVVISWVHAHVM*KAEASVVSPPV
Trigger: AACTGGGGGAGATACCACAGATGCCTCAGCTTTCCACATAACATGGGCATGAACCCAGCTAATCACCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CAA 90 bp GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTTCAGATCTCACTTGGTaGCTATTAAGGGTCTGCTGG +
Preference number: 3 (lower is better)
Translates to: AETVTQGCTCTHSSIRSSSDLTW*LLRVCW
Trigger: CCAGCAGACCCTTAATAGCAACCAAGTGAGATCTGA...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR TCA 72 bp CGTCCCTTCTTCTTCAGTTCCATTTCCCCGTGGGTATaGAGTTGGTCTTTCTTGCCATGTTTGCCATCTGTC +
Preference number: 3 (lower is better)
Translates to: RPFFFSSISPWV*SWSFLPCLPSV
Trigger: GACAGATGGCAAACATGGCAAGAAAGACCAACTTCATACCCACGGGGAAATGGAACTGAAGAAGAAGGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
3UTR CCA 72 bp GTGTTTGGAACCATGGGGTGGAGTCTAAGCGGTCTGTaGATTCTGCAGCAACCTGAAATCAATGTCCTGTTT +
Preference number: 3 (lower is better)
Translates to: VFGTMGWSLSGL*ILQQPEINVLF
Trigger: AAACAGGACATTGATTTCAGGTTGCTGCAGAATCCACAGACCGCTTAGACTCCACCCCATGGTTCCAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CAA 90 bp GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTACAAAAAGCTTCTTTTaGCTTCTAGGCCACCTAGTG +
Preference number: 3 (lower is better)
Translates to: AETVTQGCTCTHSSIRSSTKSFF*LLGHLV
Trigger: CACTAGGTGGCCTAGAAGCAAAAAGAAGCTTTTTGT...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR GCA 72 bp ATCCTTAGAGAACAACAGTTCCCAGCCACATACTTCTaGACAGCTCACATACATGCACAGAAGAGTGGGTTC +
Preference number: 3 (lower is better)
Translates to: ILREQQFPATYF*TAHIHAQKSGF
Trigger: GAACCCACTCTTCTGTGCATGTATGTGAGCTGTGCAGAAGTATGTGGCTGGGAACTGTTGTTCTCTAAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR GCA 72 bp CTACAGCTGAGACAGAGGCAGAAAAGACTCCTAACATaGCATGTCACTAGGTCACAAAGCTTTAGATGTCAG +
Preference number: 3 (lower is better)
Translates to: LQLRQRQKRLLT*HVTRSQSFRCQ
Trigger: CTGACATCTAAAGCTTTGTGACCTAGTGACATGGCATGTTAGGAGTCTTTTCTGCCTCTGTCTCAGCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR GCA 72 bp AAGCCATCCCTGTCTCTTAGGCTATTTCTTCCATTCTaGAGACAGTTCCCTTACCAGGGTCACTTGGAAAAT +
Preference number: 3 (lower is better)
Translates to: KPSLSLRLFLPF*RQFPYQGHLEN
Trigger: ATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCCTAAGAGACAGGGATGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CCA 72 bp AAGGATTCTCTGTTGGTTTCTCAGAAATCCAAATTATaGGGTCCCACCTCCACAAGACAGTGTTTGGAACCA +
Preference number: 3 (lower is better)
Translates to: KDSLLVSQKSKL*GPTSTRQCLEP
Trigger: TGGTTCCAAACACTGTCTTGTGGAGGTGGGACCCCATAATTTGGATTTCTGAGAAACCAACAGAGAATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CCA 72 bp TCTTGTCCTGGAACCAGCAGAATAAGGATTCTCTGTTaGTTTCTCAGAAATCCAAATTATGGGGTCCCACCT +
Preference number: 3 (lower is better)
Translates to: SCPGTSRIRILC*FLRNPNYGVPP
Trigger: AGGTGGGACCCCATAATTTGGATTTCTGAGAAACCAACAGAGAATCCTTATTCTGCTGGTTCCAGGACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CCA 72 bp TCAAGTGCAGCCCACCACATGCTTTATAAGTGTCCATaGATAAATGAATGGATGGGTAGTTCACTGAACTAC +
Preference number: 3 (lower is better)
Translates to: SSAAHHMLYKCP*INEWMGSSLNY
Trigger: GTAGTTCAGTGAACTACCCATCCATTCATTTATCCATGGACACTTATAAAGCATGTGGTGGGCTGCACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CCA 72 bp ATCCAGTTGTCTACCTTCATCAAGGTAGATACAGTCTaGACTCTCAGATCTCACTTGGTTGCTATTAAGGGT +
Preference number: 3 (lower is better)
Translates to: IQLSTFIKVDTV*TLRSHLVAIKG
Trigger: ACCCTTAATAGCAACCAAGTGAGATCTGAGAGTCCAGACTGTATCTACCTTGATGAAGGTAGACAACTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR-3UTR CAA 90 bp AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCTCTTTCTTGCCATGTTaGCCATCTGTCCTGCATTTC +
Preference number: 3 (lower is better)
Translates to: RWISVSSRQPGLHSKFKVSFLPC*PSVLHF
Trigger: GAAATGCAGGACAGATGGCAAACATGGCAAGAAAGA...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
3UTR CCA 72 bp CACCACATGCTTTATAAGTGTCCATGGATAAATGAATaGATGGGTAGTTCACTGAACTACACAGGGAAAATT +
Preference number: 3 (lower is better)
Translates to: HHMLYKCPWINE*MGSSLNYTGKI
Trigger: AATTTTCCCTGTGTAGTTCAGTGAACTACCCATCCATTCATTTATCCATGGACACTTATAAAGCATGTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR TCA 72 bp AATATAGTTTACATTGCCAGCTGTAGAAACAGGCTCTaGCAAATGGCATCATTAAGCAATTTCATTGTACAA +
Preference number: 3 (lower is better)
Translates to: NIVYIASCRNRL*QMASLSNFIVQ
Trigger: TTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTGTTTCTACAGCTGGCAATGTAAACTATATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
3UTR CAA 72 bp CCTGTGCCCAGGACTCCTTCAGTTGCTCTGGGCTCCTaGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: PVPRTPSVALGS*AVGLSRRHRVF
Trigger: GAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CAA 72 bp CTGCTGTTGGGATGCCTGTGCCCAGGACTCCTTCAGTaGCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LLLGCLCPGLLQ*LWAPWLWGCPA
Trigger: TGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGGCACAGGCATCCCAACAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp GCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCTCCCCTCCTCCACACTaGATACAGGTGTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: ALGSLAVGLSRRHRVFSSSPPPH*IQVFIP
Trigger: TGGGATGAACACCTGTATCCAGTGTGGAGGAGGGGA...GCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp CTGCTGCCCCCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCAATCGCTTGGCAGCCTaGAGAGGCAGTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLPPVDLSKEVIPSPALLNRLAA*RGSPAA
Trigger: GGCTGCAGGACTGCCTCTCCAGGCTGCCAAGCGATT...GAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGGGGGCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp GCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCTTAGCATCTTCCTTCTaGCATCTGGGGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: ALGSLAVGLSRRHRVFSSLASSF*HLGNTR
Trigger: CCTGGTGTTCCCCAGATGCCAGAAGGAAGATGCTAA...GCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR TCA 90 bp TGGTGCATGGCTCTAGTCCCACACTTGGGAGGCAGAGGTAGGTGGATTTCTGTGACCCACCAGAGCCGGTaGGTCACTGGTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: WCMALVPHLGGRGRWISVTHQSR*VTGQDC
Trigger: GCAGTCCTGACCAGTGACTCACCGGCTCTGGTGGGT...CACAGAAATCCACCTACCTCTGCCTCCCAAGTGTGGGACTAGAGCCATGCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR GCA 90 bp TGGTGCATGGCTCTAGTCCCACACTTGGGAGGCAGAGGTAGGTGGATTTCTGTGGCATGGCCCGGGCACTaGAGTTTGCACGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: WCMALVPHLGGRGRWISVAWPGH*SLHGEV
Trigger: AACCTCACCGTGCAAACTGCAGTGCCCGGGCCATGC...CACAGAAATCCACCTACCTCTGCCTCCCAAGTGTGGGACTAGAGCCATGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CCA 90 bp CTGCCGTCTCCCCTCCTCCACACTGGATACAGGTGTTCATCCCATTCATTTTCAGTGCCCGTCCCTGCTTaGCAGCCTGGAGAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: LPSPLLHTGYRCSSHSFSVPVPA*QPGEAV
Trigger: GACTGCCTCTCCAGGCTGCCAAGCAGGGACGGGCAC...TGAAAATGAATGGGATGAACACCTGTATCCAGTGTGGAGGAGGGGAGACGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203757.2
CDS-3UTR GCA 90 bp TGGTGCATGGCTCTAGTCCCACACTTGGGAGGCAGAGGTAGGTGGATTTCTGTGCTGGAGAGGCAGTCCTaGAGCCAGCAGCAGAAATCC +
Preference number: 4 (lower is better)
Translates to: WCMALVPHLGGRGRWISVLERQS*SQQQKS
Trigger: GGATTTCTGCTGCTGGCTGCAGGACTGCCTCTCCAG...CACAGAAATCCACCTACCTCTGCCTCCCAAGTGTGGGACTAGAGCCATGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CCA 90 bp CCCAGGACTCCTTCAGTTGCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGTCAAAGTGTGATTGTTaGAGACAAACAGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PRTPSVALGSLAVGLSRRSKCDC*RQTGQC
Trigger: ACACTGGCCTGTTTGTCTCCAACAATCACACTTTGA...CCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGCAACTGAAGGAGTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp ACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGGCTGAGAGGCCCTGTCGAAGGGGGAGGGCATaGCCCGGGCACTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: TTTNLSKHCQTLLAERPCRRGRA*PGHCSL
Trigger: CAAACTGCAGTGCCCGGGCCATGCCCTCCCCCTTCG...ACAGGGCCTCTCAGCCAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp ATTGGTTGTGCTCTCTCATGTGATCGGGATACTGTTCATGGCCCAGCACATCACCCCTGCTTGGCAGCCTaGAGAGGCAGTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: IGCALSCDRDTVHGPAHHPCLAA*RGSPAA
Trigger: GGCTGCAGGACTGCCTCTCCAGGCTGCCAAGCAGGG...GTGATGTGCTGGGCCATGAACAGTATCCCGATCACATGAGAGAGCACAACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203757.2
CDS-3UTR TCA 90 bp CTGCTGCCCCCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCCATCATCTCCCAGAGTaGAATTCACACAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LLPPVDLSKEVIPSPALLHHLPE*NSHSRC
Trigger: GCACCTACTGTGTGAATTTCACTCTGGGAGATGATG...GAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGGGGGCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR GCA 90 bp CCCTCCTCCACACTGGATACAGGTGTTCATCCCATTCATTTTCATCCGAAGACCATGTGTGCCCGTCCCTaGTTGGCAGCCTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PSSTLDTGVHPIHFHPKTMCARP*LAAWRG
Trigger: GCCTCTCCAGGCTGCCAAGCAGGGACGGGCACACAT...GGTCTTCGGATGAAAATGAATGGGATGAACACCTGTATCCAGTGTGGAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203757.2
CDS-3UTR CCA 90 bp TGGTGCATGGCTCTAGTCCCACACTTGGGAGGCAGAGGTAGGTGGATTTCTGTGCATCACGAAATCGCTTaGCAGCCTGGAGAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: WCMALVPHLGGRGRWISVHHEIA*QPGEAV
Trigger: GACTGCCTCTCCAGGCTGCCAAGCGATTTCGTGATG...CACAGAAATCCACCTACCTCTGCCTCCCAAGTGTGGGACTAGAGCCATGCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR GCA 90 bp GTTGTGCTCTCTCATGTGATCGGGATACTGTTCATGGCCCAGCACATCACGAAAACCTCCACACATGTGTaGCCGTCCCTGCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VVLSHVIGILFMAQHITKTSTHV*PSLLGS
Trigger: GCTGCCAAGCAGGGACGGGCACACATGTGTGGAGGT...TTTCGTGATGTGCTGGGCCATGAACAGTATCCCGATCACATGAGAGAGCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000203757.2
CDS-3UTR GCA 90 bp GTTGTGCTCTCTCATGTGATCGGGATACTGTTCATGGCCCAGCACATCACGAAACTGGAGAGGCAGTCCTaGAGCCAGCAGCAGAAATCC +
Preference number: 4 (lower is better)
Translates to: VVLSHVIGILFMAQHITKLERQS*SQQQKS
Trigger: GGATTTCTGCTGCTGGCTGCAGGACTGCCTCTCCAG...TTTCGTGATGTGCTGGGCCATGAACAGTATCCCGATCACATGAGAGAGCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203757.2
CDS-3UTR CCA 90 bp CCCACCCTAGTTTTGACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGCGGTTCTGGGCGATCTaGCAGGTGGGGTCGGAGATG +
Preference number: 4 (lower is better)
Translates to: PTLVLTTTNLSKHCQTLLRFWAI*QVGSEM
Trigger: CATCTCCGACCCCACCTGCCAGATCGCCCAGAACCG...CAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGTCAAAACTAGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCCTTGTCCTGGAGCAATaGATCCTTCTCCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PVDLSKEVIPSPALLILVLVLEQ*ILLLVS
Trigger: GGAGACCAGGAGAAGGATCCATTGCTCCAGGACAAG...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR TCA 90 bp TCTCAGCCAACATCAATCAAGCCATCCCTGTCTCTTAGGCTATTTCTTCCATTCTCAGGCCCTTGCCCTTaGCCGTGTTCCTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SQPTSIKPSLSLRLFLPFSGPCP*PCSWGS
Trigger: ACTGCCCCAGGAACACGGTCAAGGGCAAGGGCCTGA...GAATGGAAGAAATAGCCTAAGAGACAGGGATGGCTTGATTGATGTTGGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR TCA 90 bp GTTGTGCTCTCTCATGTGATCGGGATACTGTTCATGGCCCAGCACATCACGAAACACAGACTTGTCCACTaGCCTCCACACATGTGTGCC +
Preference number: 4 (lower is better)
Translates to: VVLSHVIGILFMAQHITKHRLVH*PPHMCA
Trigger: GGCACACATGTGTGGAGGTCAGTGGACAAGTCTGTG...TTTCGTGATGTGCTGGGCCATGAACAGTATCCCGATCACATGAGAGAGCACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203757.2
CDS-3UTR GCA 90 bp CCCACCCTAGTTTTGACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGAGGAGTCCTTCCACCTaGCGTCTCCCCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: PTLVLTTTNLSKHCQTLLRSPST*RLPSST
Trigger: TGTGGAGGAGGGGAGACGGCAGGTGGAAGGACTCCT...CAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGTCAAAACTAGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR GCA 90 bp TCTCAGCCAACATCAATCAAGCCATCCCTGTCTCTTAGGCTATTTCTTCCATTCCTGGTCAGGACTGCCTaGACACGGCCTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SQPTSIKPSLSLRLFLPFLVRTA*TRPPSQ
Trigger: CTGGGAAGGAGGCCGTGTGCAGGCAGTCCTGACCAG...GAATGGAAGAAATAGCCTAAGAGACAGGGATGGCTTGATTGATGTTGGCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR GCA 90 bp CCCACCCTAGTTTTGACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGGTCACTGGTCAGGACTaGCTGCACACGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PTLVLTTTNLSKHCQTLLVTGQD*LHTASF
Trigger: GAAGGAGGCCGTGTGCAGGCAGTCCTGACCAGTGAC...CAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGTCAAAACTAGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp AGAACAACAGTTCCCAGCCACATACTTCTGCACAGCTCACATACATGCACAGAAAGTCCATCAGGGAGTTaGCAGGCTGCGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RTTVPSHILLHSSHTCTESPSGS*QAAVWA
Trigger: TGCCCACACCGCAGCCTGCCAACTCCCTGATGGACT...TTCTGTGCATGTATGTGAGCTGTGCAGAAGTATGTGGCTGGGAACTGTTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR TCA 90 bp GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTCGATGGGGAGGTCTCTaGGGAAGATCTCATCAGACA +
Preference number: 4 (lower is better)
Translates to: AETVTQGCTCTHSSIRSSRWGGL*GRSHQT
Trigger: TGTCTGATGAGATCTTCCTCAGAGACCTCCCCATCG...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR TCA 90 bp ACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGGCTGAGAGGCCCTGTAGGTGCCAGACCCATTaGAGGCTCTTCTCACAGACA +
Preference number: 4 (lower is better)
Translates to: TTTNLSKHCQTLLAERPCRCQTH*RLFSQT
Trigger: TGTCTGTGAGAAGAGCCTTCAATGGGTCTGGCACCT...ACAGGGCCTCTCAGCCAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR TCA 90 bp CCCACCCTAGTTTTGACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGAGATCAGGGTGCTGGTaGGGGCCAGGCTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: PTLVLTTTNLSKHCQTLLRSGCW*GPGLHH
Trigger: ATGATGCAAGCCTGGCCCTCACCAGCACCCTGATCT...CAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGTCAAAACTAGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp ACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGGCTGAGAGGCCCTGTGTCCTTGGCTTGTCCTaGAGCAATGGATCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TTTNLSKHCQTLLAERPCVLGLS*SNGSFS
Trigger: GGAGAAGGATCCATTGCTCCAGGACAAGCCAAGGAC...ACAGGGCCTCTCAGCCAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
3UTR CAA 72 bp CACGCACCATACACAAAGCCCGGGCCCATTATAATTTaGTCAGGAGCTCAGGCATGCTCAGTGAGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: HAPYTKPGPIII*SGAQACSVSWK
Trigger: CTTCCAACTCACTGAGCATGCCTGAGCTCCTGACAAAATTATAATGGGCCCGGGCTTTGTGTATGGTGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR GCA 90 bp GCTGAGACTGTAACACAAGGCTGTACCTGCACTCATTCTTCCATCAGGAGCAGTACCATCATCTGCCCCTaGAGTCCAGTTGTAGACATG +
Preference number: 4 (lower is better)
Translates to: AETVTQGCTCTHSSIRSSTIICP*SPVVDM
Trigger: CATGTCTACAACTGGACTGCAGGGGCAGATGATGGT...ACTGCTCCTGATGGAAGAATGAGTGCAGGTACAGCCTTGTGTTACAGTCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp TGCTCATTCTTGTCCTGGAACCAGCAGAATAAGGATTCTCTGTTGGTTTCTCAGCATTTCTTCCATCCATaGGGGCGAGGGAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: CSFLSWNQQNKDSLLVSQHFFHP*GRGKGL
Trigger: GAGGCCCTTCCCTCGCCCCCATGGATGGAAGAAATG...CTGAGAAACCAACAGAGAATCCTTATTCTGCTGGTTCCAGGACAAGAATGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCACGAAGGGGGAGGGCATaGCCCGGGCACTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LHFYMIIPEVYSHLYLLSRRGRA*PGHCSL
Trigger: CAAACTGCAGTGCCCGGGCCATGCCCTCCCCCTTCG...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR TCA 90 bp GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTACCCACCAGAGCCGGTaGGTCACTGGTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: ETLSLPMSSLKCYLTTLPTHQSR*VTGQDC
Trigger: GCAGTCCTGACCAGTGACTCACCGGCTCTGGTGGGT...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR TCA 90 bp CTGTGGATTCTGCAGCAACCTGAAATCAATGTCCTGTTTTGGGTACTAGTGAACAGACAGTCACTTCCATaGCCTGAGGGCCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LWILQQPEINVLFWVLVNRQSLP*PEGQLS
Trigger: TGACAGCTGGCCCTCAGGTCATGGAAGTGACTGTCT...GTTCACTAGTACCCAAAACAGGACATTGATTTCAGGTTGCTGCAGAATCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR GCA 90 bp AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCAGGAGTCCTTCCACCTaGCGTCTCCCCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: RWISVSSRQPGLHSKFKVRSPST*RLPSST
Trigger: TGTGGAGGAGGGGAGACGGCAGGTGGAAGGACTCCT...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR GCA 90 bp CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCACTGGTCAGGACTGCCTaGACACGGCCTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LHFYMIIPEVYSHLYLLSLVRTA*TRPPSQ
Trigger: CTGGGAAGGAGGCCGTGTGCAGGCAGTCCTGACCAG...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CCA 90 bp TCTCAGCCAACATCAATCAAGCCATCCCTGTCTCTTAGGCTATTTCTTCCATTCCATCACGAAATCGCTTaGCAGCCTGGAGAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: SQPTSIKPSLSLRLFLPFHHEIA*QPGEAV
Trigger: GACTGCCTCTCCAGGCTGCCAAGCGATTTCGTGATG...GAATGGAAGAAATAGCCTAAGAGACAGGGATGGCTTGATTGATGTTGGCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR TCA 90 bp AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCAGATCAGGGTGCTGGTaGGGGCCAGGCTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: RWISVSSRQPGLHSKFKVRSGCW*GPGLHH
Trigger: ATGATGCAAGCCTGGCCCTCACCAGCACCCTGATCT...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CCA 90 bp CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCAAATCGCTTGGCAGCCTaGAGAGGCAGTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LHFYMIIPEVYSHLYLLSNRLAA*RGSPAA
Trigger: GGCTGCAGGACTGCCTCTCCAGGCTGCCAAGCGATT...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CCA 90 bp CTGTGGATTCTGCAGCAACCTGAAATCAATGTCCTGTTTTGGGTACTAGTGAACCTTCCTTCTGGCATCTaGGGAACACCAGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: LWILQQPEINVLFWVLVNLPSGI*GTPGSP
Trigger: TGGTGAACCTGGTGTTCCCCAGATGCCAGAAGGAAG...GTTCACTAGTACCCAAAACAGGACATTGATTTCAGGTTGCTGCAGAATCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATCGGTTCTGGGCGATCTaGCAGGTGGGGTCGGAGATG +
Preference number: 4 (lower is better)
Translates to: QALTNGIIKQFHCTNVRHRFWAI*QVGSEM
Trigger: CATCTCCGACCCCACCTGCCAGATCGCCCAGAACCG...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CCA 90 bp GGCTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATATCTCAGAGGGGAGTCTaGGTCTTTGCCAGGGATAGA +
Preference number: 4 (lower is better)
Translates to: GYFFHSADSSLTRVTWKISQRGV*VFARDR
Trigger: TCTATCCCTGGCAAAGACCCAGACTCCCCTCTGAGA...TATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp TGCTCATTCTTGTCCTGGAACCAGCAGAATAAGGATTCTCTGTTGGTTTCTCAGAATGGATCCTTCTCCTaGTCTCCTCGGAAGAACGGG +
Preference number: 4 (lower is better)
Translates to: CSFLSWNQQNKDSLLVSQNGSFS*SPRKNG
Trigger: CCCGTTCTTCCGAGGAGACCAGGAGAAGGATCCATT...CTGAGAAACCAACAGAGAATCCTTATTCTGCTGGTTCCAGGACAAGAATGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR GCA 90 bp GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTCTGGAGAGGCAGTCCTaGAGCCAGCAGCAGAAATCC +
Preference number: 4 (lower is better)
Translates to: ETLSLPMSSLKCYLTTLPLERQS*SQQQKS
Trigger: GGATTTCTGCTGCTGGCTGCAGGACTGCCTCTCCAG...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR GCA 90 bp CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATGTCACTGGTCAGGACTaGCTGCACACGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QALTNGIIKQFHCTNVRHVTGQD*LHTASF
Trigger: GAAGGAGGCCGTGTGCAGGCAGTCCTGACCAGTGAC...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR GCA 90 bp GGTCCTCCACAATGCCTCAAAAATGAGCAGTCATTCTATAATACCATCATATTTGCATGGCCCGGGCACTaGAGTTTGCACGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GPPQCLKNEQSFYNTIIFAWPGH*SLHGEV
Trigger: AACCTCACCGTGCAAACTGCAGTGCCCGGGCCATGC...AAATATGATGGTATTATAGAATGACTGCTCATTTTTGAGGCATTGTGGAGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCACATTTCTTCCATCCATaGGGGCGAGGGAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LHFYMIIPEVYSHLYLLSHFFHP*GRGKGL
Trigger: GAGGCCCTTCCCTCGCCCCCATGGATGGAAGAAATG...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CCA 90 bp ACAACCACAAATCTCTCCAAACATTGCCAAACACTCCTGGCTGAGAGGCCCTGTTTCGGCAGTTTTCATTaGAAATGTCACTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TTTNLSKHCQTLLAERPCFGSFH*KCHSAP
Trigger: TGGAGCTGAGTGACATTTCCAATGAAAACTGCCGAA...ACAGGGCCTCTCAGCCAGGAGTGTTTGGCAATGTTTGGAGAGATTTGTGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR GCA 90 bp GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTGGTGAGGGCCAGGCTTaGATCATCTCCCAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: ETLSLPMSSLKCYLTTLPGEGQA*IISQSE
Trigger: TTCACTCTGGGAGATGATGCAAGCCTGGCCCTCACC...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp GGCTATTTCTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTTGGAAAATACACCGACCCAGTTTTTaGAAATACTGGCCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: GYFFHSADSSLTRVTWKIHRPSF*KYWPSV
Trigger: CACACTTGGCCAGTATTTCCAAAAACTGGGTCGGTG...TATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACAAGTCCATCAGGGAGTTaGCAGGCTGCGGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RSSICTCVTYSKDLQIFTSPSGS*QAAVWA
Trigger: TGCCCACACCGCAGCCTGCCAACTCCCTGATGGACT...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CCA 90 bp CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCACTTCCTTCTGGCATCTaGGGAACACCAGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: LHFYMIIPEVYSHLYLLSLPSGI*GTPGSP
Trigger: TGGTGAACCTGGTGTTCCCCAGATGCCAGAAGGAAG...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CCA 90 bp CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCATCTCAGAGGGGAGTCTaGGTCTTTGCCAGGGATAGA +
Preference number: 4 (lower is better)
Translates to: LHFYMIIPEVYSHLYLLSSQRGV*VFARDR
Trigger: TCTATCCCTGGCAAAGACCCAGACTCCCCTCTGAGA...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR TCA 90 bp CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATAGGTGCCAGACCCATTaGAGGCTCTTCTCACAGACA +
Preference number: 4 (lower is better)
Translates to: QALTNGIIKQFHCTNVRHRCQTH*RLFSQT
Trigger: TGTCTGTGAGAAGAGCCTTCAATGGGTCTGGCACCT...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR GCA 90 bp CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCAGGGACATCTGCTATCTaGATGATGCTGACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LHFYMIIPEVYSHLYLLSGTSAI*MMLTSR
Trigger: CCTGGAAGTCAGCATCATGCAGATAGCAGATGTCCC...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR GCA 90 bp AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACAGGTGAGGGCCAGGCTTaGATCATCTCCCAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: RSSICTCVTYSKDLQIFTGEGQA*IISQSE
Trigger: TTCACTCTGGGAGATGATGCAAGCCTGGCCCTCACC...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CCA 90 bp CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATTCCCCTCCTCCACACTaGATACAGGTGTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: QALTNGIIKQFHCTNVRHSPPPH*IQVFIP
Trigger: TGGGATGAACACCTGTATCCAGTGTGGAGGAGGGGA...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CCA 90 bp AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCCACCGACCCAGTTTTTaGAAATACTGGCCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: RWISVSSRQPGLHSKFKVHRPSF*KYWPSV
Trigger: CACACTTGGCCAGTATTTCCAAAAACTGGGTCGGTG...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR TCA 90 bp GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTGGTTCACCACAAAAGTaGTATTGGAACCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: ETLSLPMSSLKCYLTTLPGSPQK*YWNPPE
Trigger: CTCTGGTGGGTTCCAATATCACTTTTGTGGTGAACC...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR TCA 90 bp CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCAGGTTCACCACAAAAGTaGTATTGGAACCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: LHFYMIIPEVYSHLYLLSGSPQK*YWNPPE
Trigger: CTCTGGTGGGTTCCAATATCACTTTTGTGGTGAACC...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR TCA 90 bp AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACACGATGGGGAGGTCTCTaGGGAAGATCTCATCAGACA +
Preference number: 4 (lower is better)
Translates to: RSSICTCVTYSKDLQIFTRWGGL*GRSHQT
Trigger: TGTCTGATGAGATCTTCCTCAGAGACCTCCCCATCG...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR TCA 90 bp CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCACATCATCTCCCAGAGTaGAATTCACACAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LHFYMIIPEVYSHLYLLSHHLPE*NSHSRC
Trigger: GCACCTACTGTGTGAATTTCACTCTGGGAGATGATG...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR GCA 90 bp GGTCCTCCACAATGCCTCAAAAATGAGCAGTCATTCTATAATACCATCATATTTGGGACATCTGCTATCTaGATGATGCTGACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPPQCLKNEQSFYNTIIFGTSAI*MMLTSR
Trigger: CCTGGAAGTCAGCATCATGCAGATAGCAGATGTCCC...AAATATGATGGTATTATAGAATGACTGCTCATTTTTGAGGCATTGTGGAGGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATTTAGCATCTTCCTTCTaGCATCTGGGGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: QALTNGIIKQFHCTNVRHLASSF*HLGNTR
Trigger: CCTGGTGTTCCCCAGATGCCAGAAGGAAGATGCTAA...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR GCA 90 bp AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACAACCATCATCTGCCCCTaGAGTCCAGTTGTAGACATG +
Preference number: 4 (lower is better)
Translates to: RSSICTCVTYSKDLQIFTTIICP*SPVVDM
Trigger: CATGTCTACAACTGGACTGCAGGGGCAGATGATGGT...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CCA 90 bp GGTCCTCCACAATGCCTCAAAAATGAGCAGTCATTCTATAATACCATCATATTTTCGGGATACTGTTCATaGCCCAGCACATCACGAAAT +
Preference number: 4 (lower is better)
Translates to: GPPQCLKNEQSFYNTIIFSGYCS*PSTSRN
Trigger: ATTTCGTGATGTGCTGGGCCATGAACAGTATCCCGA...AAATATGATGGTATTATAGAATGACTGCTCATTTTTGAGGCATTGTGGAGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCATTCGGCAGTTTTCATTaGAAATGTCACTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LHFYMIIPEVYSHLYLLSFGSFH*KCHSAP
Trigger: TGGAGCTGAGTGACATTTCCAATGAAAACTGCCGAA...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
3UTR CAA 72 bp CTTCCATTCTGCAGACAGTTCCCTTACCAGGGTCACTaGGAAAATATAAATCGACACAATTTACTATTTCAG +
Preference number: 4 (lower is better)
Translates to: LPFCRQFPYQGH*ENINRHNLLFQ
Trigger: CTGAAATAGTAAATTGTGTCGATTTATATTTTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CCA 90 bp AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACATCAAAGTGTGATTGTTaGAGACAAACAGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: RSSICTCVTYSKDLQIFTSKCDC*RQTGQC
Trigger: ACACTGGCCTGTTTGTCTCCAACAATCACACTTTGA...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
3UTR CAA 72 bp CATTTCTACATGATCATCCCAGAGGTGTATTCTCACTaGTATTTGTTGTCAAGAATTATCTGCAAATGCTAT +
Preference number: 4 (lower is better)
Translates to: HFYMIIPEVYSH*YLLSRIICKCY
Trigger: ATAGCATTTGCAGATAATTCTTGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CAA 90 bp GCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCATGGGGGTGGCCCCTTaGCAGGTCACAGTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: ALGSLAVGLSRRHRVFSSMGVAP*QVTVKS
Trigger: GGACTTCACTGTGACCTGCAAAGGGGCCACCCCCAT...GCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS CCA 90 bp CCATGGGGGCGAGGGAAGGGCCTCCTGTCCGGGAACCTGAGATGCTaGCTTCGGCTGGTGCCATCTTCCCAGTCACCATCATCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: PWGRGKGLLSGNLRC*LRLVPSSQSPSSAP
Trigger: AGGGGCAGATGATGGTGACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTCAGGTTCCCGGACAGGAGGCCCTTCCCTCGCCCCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CCA 90 bp AGCAGGCACAGCCCATCCACAGCCACAGGGCTGCAGACCCGGTTCTaGGCGATCTGGCAGGTGGGGTCGGAGATGATCGTACAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SRHSPSTATGLQTRF*AIWQVGSEMIVQAS
Trigger: GGAAGCCTGTACGATCATCTCCGACCCCACCTGCCAGATCGCCCAGAACCGGGTCTGCAGCCCTGTGGCTGTGGATGGGCTGTGCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS GCA 90 bp CATCCATGGGGGCGAGGGAAGGGCCTCCTGTCCGGGAACCTGAGATaGTGGCTTCGGCTGGTGCCATCTTCCCAGTCACCATCATCTGCC +
Preference number: 5 (lower is better)
Translates to: HPWGRGKGLLSGNLR*WLRLVPSSQSPSSA
Trigger: GGCAGATGATGGTGACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTCAGGTTCCCGGACAGGAGGCCCTTCCCTCGCCCCCATGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS TCA 90 bp TCTTCCATCCATGGGGGCGAGGGAAGGGCCTCCTGTCCGGGAACCTaGGATGCTGGCTTCGGCTGGTGCCATCTTCCCAGTCACCATCAT +
Preference number: 5 (lower is better)
Translates to: SSIHGGEGRASCPGT*DAGFGWCHLPSHHH
Trigger: ATGATGGTGACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTCAGGTTCCCGGACAGGAGGCCCTTCCCTCGCCCCCATGGATGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS-3UTR CAA 90 bp GCTCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCACAAACAGGCCAGTGTaGTCCCCAAAGTTCCACTTG +
Preference number: 5 (lower is better)
Translates to: ALGSLAVGLSRRHRVFSSTNRPV*SPKFHL
Trigger: CAAGTGGAACTTTGGGGACAACACTGGCCTGTTTGT...GCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS CCA 90 bp GCCGATGGAGATCAGGACACCATTCACTGCTCTCAGAGGGGAGTCTaGGTCTTTGCCAGGGATAGAGATCAGGGTGCTGGTGAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: ADGDQDTIHCSQRGV*VFARDRDQGAGEGQ
Trigger: CTGGCCCTCACCAGCACCCTGATCTCTATCCCTGGCAAAGACCCAGACTCCCCTCTGAGAGCAGTGAATGGTGTCCTGATCTCCATCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS TCA 90 bp CACCAGGTTCACCACAAAAGTGATATTGGAACCCACCAGAGCCGGTaGGTCACTGGTCAGGACTGCCTGCACACGGCCTCCTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: HQVHHKSDIGTHQSR*VTGQDCLHTASFPG
Trigger: TCCTGGGAAGGAGGCCGTGTGCAGGCAGTCCTGACCAGTGACTCACCGGCTCTGGTGGGTTCCAATATCACTTTTGTGGTGAACCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS TCA 90 bp AATGGATCCTTCTCCTGGTCTCCTCGGAAGAACGGGGCTTTCGCGTaGCTGAGGAGAACACTCAGGCCCTTGCCCTTGACCGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: NGSFSWSPRKNGAFA*LRRTLRPLPLTVFL
Trigger: CAGGAACACGGTCAAGGGCAAGGGCCTGAGTGTTCTCCTCAGTCACGCGAAAGCCCCGTTCTTCCGAGGAGACCAGGAGAAGGATCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CAA 90 bp CCTGTTGACCTGAGCAAGGAAGTGATCCCAAGCCCAGCCTTGCTCATTCTTGTCAAGTCCATCAGGGAGTaGGCAGGCTGCGGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: PVDLSKEVIPSPALLILVKSIRE*AGCGVG
Trigger: GCCCACACCGCAGCCTGCCAACTCCCTGATGGACTT...GACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCCTTGCTCAGGTCAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CAA 90 bp TCTGGGCTCCTTGGCTGTGGGGCTGTCCCGCAGGCACAGGGTGTTCAGCAGCCCTACGCCTTGTGTTTTTaGTACAGCAAGATGGTAACC +
Preference number: 5 (lower is better)
Translates to: SGLLGCGAVPQAQGVQQPYALCF*YSKMVT
Trigger: GGTTACCATCTTGCTGTACAAAAAACACAAGGCGTA...GGGCTGCTGAACACCCTGTGCCTGCGGGACAGCCCCACAGCCAAGGAGCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CAA 90 bp TCACGAAATCCGCGGACTTCCTTCTCTGGAACCCATATGGCAGAAGGAAAGCAGTGTGCCCGTCCCTGCTaGGCAGCCTGGAGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SRNPRTSFSGTHMAEGKQCARPC*AAWRGS
Trigger: ACTGCCTCTCCAGGCTGCCAAGCAGGGACGGGCACA...CTGCTTTCCTTCTGCCATATGGGTTCCAGAGAAGGAAGTCCGCGGATTTCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203757.2
CDS GCA 90 bp GAGATGCTGGCTTCGGCTGGTGCCATCTTCCCAGTCACCATCATCTaGCCCTGCAGTCCAGTTGTAGACATGCAGGTCAGATGTCAGTCC +
Preference number: 5 (lower is better)
Translates to: EMLASAGAIFPVTII*PCSPVVDMQVRCQS
Trigger: GGACTGACATCTGACCTGCATGTCTACAACTGGACTGCAGGGGCAGATGATGGTGACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS GCA 90 bp GACAAGCACAGCCAGGCAGCCGATGGAGATCAGGACACCATTCACTaGTCTCAGAGGGGAGTCTGGGTCTTTGCCAGGGATAGAGATCAG +
Preference number: 5 (lower is better)
Translates to: DKHSQAADGDQDTIH*SQRGVWVFARDRDQ
Trigger: CTGATCTCTATCCCTGGCAAAGACCCAGACTCCCCTCTGAGAGCAGTGAATGGTGTCCTGATCTCCATCGGCTGCCTGGCTGTGCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS GCA 90 bp GTCCATCAGGGAGTTGGCAGGCTGCGGTGTGGGCATGGGGACATCTaGTATCTGCATGATGCTGACTTCCAGGATCCCCTCTACAATTGT +
Preference number: 5 (lower is better)
Translates to: VHQGVGRLRCGHGDI*YLHDADFQDPLYNC
Trigger: ACAATTGTAGAGGGGATCCTGGAAGTCAGCATCATGCAGATAGCAGATGTCCCCATGCCCACACCGCAGCCTGCCAACTCCCTGATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS GCA 90 bp GTCTTTGCCAGGGATAGAGATCAGGGTGCTGGTGAGGGCCAGGCTTaGATCATCTCCCAGAGTGAAATTCACACAGTAGGTGCCAGACCC +
Preference number: 5 (lower is better)
Translates to: VFARDRDQGAGEGQA*IISQSEIHTVGARP
Trigger: GGGTCTGGCACCTACTGTGTGAATTTCACTCTGGGAGATGATGCAAGCCTGGCCCTCACCAGCACCCTGATCTCTATCCCTGGCAAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS TCA 90 bp ATGTATGCCCGGCCGTATCTTCGAAAGACAGTCACTTCCATGACCTaGGGGCCAGCTGTCAAGTTGACTGTGTTTATAGAAACCCGTGCT +
Preference number: 5 (lower is better)
Translates to: MYARPYLRKTVTSMT*GPAVKLTVFIETRA
Trigger: AGCACGGGTTTCTATAAACACAGTCAACTTGACAGCTGGCCCTCAGGTCATGGAAGTGACTGTCTTTCGAAGATACGGCCGGGCATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS TCA 90 bp TTTTCATCCGAAGACCAGCCACGTAATTGGTTGTGCTCTCTCATGTaGTCGGGATACTGTTCATGGCCCAGCACATCACGAAATCGCTTG +
Preference number: 5 (lower is better)
Translates to: FSSEDQPRNWLCSLM*SGYCSWPSTSRNRL
Trigger: CAAGCGATTTCGTGATGTGCTGGGCCATGAACAGTATCCCGATCACATGAGAGAGCACAACCAATTACGTGGCTGGTCTTCGGATGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS-3UTR CAA 90 bp TCTCAGCCAACATCAATCAAGCCATCCCTGTCTCTTAGGCTATTTCTTCCATTCACATCACGAAATCGCTaGGCAGCCTGGAGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SQPTSIKPSLSLRLFLPFTSRNR*AAWRGS
Trigger: ACTGCCTCTCCAGGCTGCCAAGCGATTTCGTGATGT...GAATGGAAGAAATAGCCTAAGAGACAGGGATGGCTTGATTGATGTTGGCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CAA 90 bp GGTCCTCCACAATGCCTCAAAAATGAGCAGTCATTCTATAATACCATCATATTTGAGGTGAGGGCGGAGTaGAAGGTGGAGGCGGAGTCG +
Preference number: 5 (lower is better)
Translates to: GPPQCLKNEQSFYNTIIFEVRAE*KVEAES
Trigger: CGACTCCGCCTCCACCTTCAACTCCGCCCTCACCTC...AAATATGATGGTATTATAGAATGACTGCTCATTTTTGAGGCATTGTGGAGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CAA 90 bp CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATGAGGTGAGGGCGGAGTaGAAGGTGGAGGCGGAGTCG +
Preference number: 5 (lower is better)
Translates to: QALTNGIIKQFHCTNVRHEVRAE*KVEAES
Trigger: CGACTCCGCCTCCACCTTCAACTCCGCCCTCACCTC...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CAA 90 bp CTGCATTTCTACATGATCATCCCAGAGGTGTATTCTCACTTGTATTTGTTGTCAAAGTCCATCAGGGAGTaGGCAGGCTGCGGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: LHFYMIIPEVYSHLYLLSKSIRE*AGCGVG
Trigger: GCCCACACCGCAGCCTGCCAACTCCCTGATGGACTT...TGACAACAAATACAAGTGAGAATACACCTCTGGGATGATCATGTAGAAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CAA 90 bp AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCATGGGGGTGGCCCCTTaGCAGGTCACAGTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: RWISVSSRQPGLHSKFKVMGVAP*QVTVKS
Trigger: GGACTTCACTGTGACCTGCAAAGGGGCCACCCCCAT...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS TCA 90 bp CTGAGGGCCAGCTGTCAAGTTGACTGTGTTTATAGAAACCCGTGCTaGACACCGACCCAGTTTTTGGAAATACTGGCCAAGTGTGTGAAA +
Preference number: 5 (lower is better)
Translates to: LRASCQVDCVYRNPC*TPTQFLEILAKCVK
Trigger: TTTCACACACTTGGCCAGTATTTCCAAAAACTGGGTCGGTGTTCAGCACGGGTTTCTATAAACACAGTCAACTTGACAGCTGGCCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS GCA 90 bp ATCTGTTATCACATACACATCTTTCACCTTCGAGATGGGAATGTATaGCCGGCCGTATCTTCGAAAGACAGTCACTTCCATGACCTGAGG +
Preference number: 5 (lower is better)
Translates to: ICYHIHIFHLRDGNV*PAVSSKDSHFHDLR
Trigger: CCTCAGGTCATGGAAGTGACTGTCTTTCGAAGATACGGCCGGGCATACATTCCCATCTCGAAGGTGAAAGATGTGTATGTGATAACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CCA 90 bp CAGGGATCTGATCTGTTATCACATACACATCTTTCACCTTCGAGATaGGAATGTATGCCCGGCCGTATCTTCGAAAGACAGTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: QGSDLLSHTHLSPSR*ECMPGRIFERQSLP
Trigger: TGGAAGTGACTGTCTTTCGAAGATACGGCCGGGCATACATTCCCATCTCGAAGGTGAAAGATGTGTATGTGATAACAGATCAGATCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS-3UTR CAA 90 bp AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCACATCACGAAATCGCTaGGCAGCCTGGAGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: RWISVSSRQPGLHSKFKVTSRNR*AAWRGS
Trigger: ACTGCCTCTCCAGGCTGCCAAGCGATTTCGTGATGT...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CAA 90 bp GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTCCCGGGCACTGCAGTTaGCACGGTGAGGTTAAGGTT +
Preference number: 5 (lower is better)
Translates to: ETLSLPMSSLKCYLTTLPPGHCS*HGEVKV
Trigger: AACCTTAACCTCACCGTGCAAACTGCAGTGCCCGGG...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CAA 90 bp AGGTGGATTTCTGTGAGTTCAAGACAACCTGGTCTACATAGTAAGTTTAAGGTCGAAATGGCAGAGTCGTaGAGGAAGTGGCTGGGATCA +
Preference number: 5 (lower is better)
Translates to: RWISVSSRQPGLHSKFKVEMAES*RKWLGS
Trigger: TGATCCCAGCCACTTCCTCAACGACTCTGCCATTTC...GACCTTAAACTTACTATGTAGACCAGGTTGTCTTGAACTCACAGAAATCCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS-3UTR CAA 90 bp CAGGCTCTGACAAATGGCATCATTAAGCAATTTCATTGTACAAATGTCAGACATCCCGGGCACTGCAGTTaGCACGGTGAGGTTAAGGTT +
Preference number: 5 (lower is better)
Translates to: QALTNGIIKQFHCTNVRHPGHCS*HGEVKV
Trigger: AACCTTAACCTCACCGTGCAAACTGCAGTGCCCGGG...ATGTCTGACATTTGTACAATGAAATTGCTTAATGATGCCATTTGTCAGAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS TCA 90 bp AAGTTCCTGTCATTCTTCTGGGACATGGTCACGAATACAGGGATCTaGTCTGTTATCACATACACATCTTTCACCTTCGAGATGGGAATG +
Preference number: 5 (lower is better)
Translates to: KFLSFFWDMVTNTGI*SVITYTSFTFEMGM
Trigger: CATTCCCATCTCGAAGGTGAAAGATGTGTATGTGATAACAGATCAGATCCCTGTATTCGTGACCATGTCCCAGAAGAATGACAGGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS-3UTR CAA 90 bp GGTCCTCCACAATGCCTCAAAAATGAGCAGTCATTCTATAATACCATCATATTTGAAATGGCAGAGTCGTaGAGGAAGTGGCTGGGATCA +
Preference number: 5 (lower is better)
Translates to: GPPQCLKNEQSFYNTIIFEMAES*RKWLGS
Trigger: TGATCCCAGCCACTTCCTCAACGACTCTGCCATTTC...AAATATGATGGTATTATAGAATGACTGCTCATTTTTGAGGCATTGTGGAGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CAA 90 bp GAAACACTAAGTCTTCCCATGTCTTCTCTAAAATGCTATTTAACCACACTCCCTACGGTGAGGTTAAGGTaGAAGGTTCCATTGAGCACA +
Preference number: 5 (lower is better)
Translates to: ETLSLPMSSLKCYLTTLPTVRLR*KVPLST
Trigger: TGTGCTCAATGGAACCTTCAACCTTAACCTCACCGT...AGGGAGTGTGGTTAAATAGCATTTTAGAGAAGACATGGGAAGACTTAGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS-3UTR CAA 90 bp AGAAGTAGCATATGTACCTGTGTGACCTACTCCAAAGACTTACAAATATTTACAACGGTGAGGTTAAGGTaGAAGGTTCCATTGAGCACA +
Preference number: 5 (lower is better)
Translates to: RSSICTCVTYSKDLQIFTTVRLR*KVPLST
Trigger: TGTGCTCAATGGAACCTTCAACCTTAACCTCACCGT...TGTAAATATTTGTAAGTCTTTGGAGTAGGTCACACAGGTACATATGCTACTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204260.2
CDS TCA 72 bp CATGGGGGCGAGGGAAGGGCCTCCTGTCCGGGAACCTaGGATGCTGGCTTCGGCTGGTGCCATCTTCCCAGT +
Preference number: 6 (lower is better)
Translates to: HGGEGRASCPGT*DAGFGWCHLPS
Trigger: ACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTCAGGTTCCCGGACAGGAGGCCCTTCCCTCGCCCCCATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS GCA 72 bp GGGCGAGGGAAGGGCCTCCTGTCCGGGAACCTGAGATaGTGGCTTCGGCTGGTGCCATCTTCCCAGTCACCA +
Preference number: 6 (lower is better)
Translates to: GRGKGLLSGNLR*WLRLVPSSQSP
Trigger: TGGTGACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTCAGGTTCCCGGACAGGAGGCCCTTCCCTCGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CCA 72 bp ACAGCCACAGGGCTGCAGACCCGGTTCTGGGCGATCTaGCAGGTGGGGTCGGAGATGATCGTACAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: TATGLQTRFWAI*QVGSEMIVQAS
Trigger: GGAAGCCTGTACGATCATCTCCGACCCCACCTGCCAGATCGCCCAGAACCGGGTCTGCAGCCCTGTGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CCA 72 bp TCCACTGACCTCCACACATGTGTGCCCGTCCCTGCTTaGCAGCCTGGAGAGGCAGTCCTGCAGCCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: STDLHTCVPVPA*QPGEAVLQPAA
Trigger: TGCTGCTGGCTGCAGGACTGCCTCTCCAGGCTGCCAAGCAGGGACGGGCACACATGTGTGGAGGTCAGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000203757.2
CDS CCA 72 bp CGAGGGAAGGGCCTCCTGTCCGGGAACCTGAGATGCTaGCTTCGGCTGGTGCCATCTTCCCAGTCACCATCA +
Preference number: 6 (lower is better)
Translates to: RGKGLLSGNLRC*LRLVPSSQSPS
Trigger: TGATGGTGACTGGGAAGATGGCACCAGCCGAAGCCAGCATCTCAGGTTCCCGGACAGGAGGCCCTTCCCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS GCA 72 bp GGCGAAGGGGGAGGGCATGGCCCGGGCACTGCAGTTTaGACGGTGAGGTTAAGGTTGAAGGTTCCATTGAGC +
Preference number: 6 (lower is better)
Translates to: GEGGGHGPGTAV*TVRLRLKVPLS
Trigger: GCTCAATGGAACCTTCAACCTTAACCTCACCGTGCAAACTGCAGTGCCCGGGCCATGCCCTCCCCCTTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CAA 72 bp GCCCCTTTGCAGGTCACAGTGAAGTCCATCAGGGAGTaGGCAGGCTGCGGTGTGGGCATGGGGACATCTGCT +
Preference number: 6 (lower is better)
Translates to: APLQVTVKSIRE*AGCGVGMGTSA
Trigger: AGCAGATGTCCCCATGCCCACACCGCAGCCTGCCAACTCCCTGATGGACTTCACTGTGACCTGCAAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS TCA 72 bp TTCTCCTGGTCTCCTCGGAAGAACGGGGCTTTCGCGTaGCTGAGGAGAACACTCAGGCCCTTGCCCTTGACC +
Preference number: 6 (lower is better)
Translates to: FSWSPRKNGAFA*LRRTLRPLPLT
Trigger: GGTCAAGGGCAAGGGCCTGAGTGTTCTCCTCAGTCACGCGAAAGCCCCGTTCTTCCGAGGAGACCAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS GCA 72 bp GGAGTTGGCAGGCTGCGGTGTGGGCATGGGGACATCTaGTATCTGCATGATGCTGACTTCCAGGATCCCCTC +
Preference number: 6 (lower is better)
Translates to: GVGRLRCGHGDI*YLHDADFQDPL
Trigger: GAGGGGATCCTGGAAGTCAGCATCATGCAGATAGCAGATGTCCCCATGCCCACACCGCAGCCTGCCAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CAA 72 bp GGATACTGTTCATGGCCCAGCACATCACGAAATCGCTaGGCAGCCTGGAGAGGCAGTCCTGCAGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GYCSWPSTSRNR*AAWRGSPAASS
Trigger: GCTGCTGGCTGCAGGACTGCCTCTCCAGGCTGCCAAGCGATTTCGTGATGTGCTGGGCCATGAACAGTATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CAA 72 bp AGGCGAAGGGGGAGGGCATGGCCCGGGCACTGCAGTTaGCACGGTGAGGTTAAGGTTGAAGGTTCCATTGAG +
Preference number: 6 (lower is better)
Translates to: RRRGRAWPGHCS*HGEVKVEGSIE
Trigger: CTCAATGGAACCTTCAACCTTAACCTCACCGTGCAAACTGCAGTGCCCGGGCCATGCCCTCCCCCTTCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CAA 90 bp CGGAGTCGAAGGCGAAGGGGGAGGGCATGGCCCGGGCACTGCAGTTaGCACGGTGAGGTTAAGGTTGAAGGTTCCATTGAGCACATAAGT +
Preference number: 6 (lower is better)
Translates to: RSRRRRGRAWPGHCS*HGEVKVEGSIEHIS
Trigger: ACTTATGTGCTCAATGGAACCTTCAACCTTAACCTCACCGTGCAAACTGCAGTGCCCGGGCCATGCCCTCCCCCTTCGCCTTCGACTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS TCA 72 bp CACCACAAAAGTGATATTGGAACCCACCAGAGCCGGTaGGTCACTGGTCAGGACTGCCTGCACACGGCCTCC +
Preference number: 6 (lower is better)
Translates to: HHKSDIGTHQSR*VTGQDCLHTAS
Trigger: GGAGGCCGTGTGCAGGCAGTCCTGACCAGTGACTCACCGGCTCTGGTGGGTTCCAATATCACTTTTGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS GCA 72 bp AGCCAGGCAGCCGATGGAGATCAGGACACCATTCACTaGTCTCAGAGGGGAGTCTGGGTCTTTGCCAGGGAT +
Preference number: 6 (lower is better)
Translates to: SQAADGDQDTIH*SQRGVWVFARD
Trigger: ATCCCTGGCAAAGACCCAGACTCCCCTCTGAGAGCAGTGAATGGTGTCCTGATCTCCATCGGCTGCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CCA 72 bp GATACTGTTCATGGCCCAGCACATCACGAAATCGCTTaGCAGCCTGGAGAGGCAGTCCTGCAGCCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: DTVHGPAHHEIA*QPGEAVLQPAA
Trigger: TGCTGCTGGCTGCAGGACTGCCTCTCCAGGCTGCCAAGCGATTTCGTGATGTGCTGGGCCATGAACAGTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CAA 72 bp ACACCATTCACTGCTCTCAGAGGGGAGTCTGGGTCTTaGCCAGGGATAGAGATCAGGGTGCTGGTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: TPFTALRGESGS*PGIEIRVLVRA
Trigger: GGCCCTCACCAGCACCCTGATCTCTATCCCTGGCAAAGACCCAGACTCCCCTCTGAGAGCAGTGAATGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS GCA 72 bp GCTTCGGCTGGTGCCATCTTCCCAGTCACCATCATCTaGCCCTGCAGTCCAGTTGTAGACATGCAGGTCAGA +
Preference number: 6 (lower is better)
Translates to: ASAGAIFPVTII*PCSPVVDMQVR
Trigger: TCTGACCTGCATGTCTACAACTGGACTGCAGGGGCAGATGATGGTGACTGGGAAGATGGCACCAGCCGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS TCA 72 bp TCTGGCATCTGGGGAACACCAGGTTCACCACAAAAGTaGTATTGGAACCCACCAGAGCCGGTGAGTCACTGG +
Preference number: 6 (lower is better)
Translates to: SGIWGTPGSPQK*YWNPPEPVSHW
Trigger: CCAGTGACTCACCGGCTCTGGTGGGTTCCAATATCACTTTTGTGGTGAACCTGGTGTTCCCCAGATGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CAA 72 bp CATCTGGGGAACACCAGGTTCACCACAAAAGTGATATaGGAACCCACCAGAGCCGGTGAGTCACTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: HLGNTRFTTKVI*EPTRAGESLVR
Trigger: CCTGACCAGTGACTCACCGGCTCTGGTGGGTTCCAATATCACTTTTGTGGTGAACCTGGTGTTCCCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS TCA 72 bp GAAATGGCAGAGTCGTTGAGGAAGTGGCTGGGATCATaGATGAGGACATCGAAGACGATGGGGAGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: EMAESLRKWLGS*MRTSKTMGRSL
Trigger: CAGAGACCTCCCCATCGTCTTCGATGTCCTCATTCATGATCCCAGCCACTTCCTCAACGACTCTGCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS GCA 72 bp AGGGATAGAGATCAGGGTGCTGGTGAGGGCCAGGCTTaGATCATCTCCCAGAGTGAAATTCACACAGTAGGT +
Preference number: 6 (lower is better)
Translates to: RDRDQGAGEGQA*IISQSEIHTVG
Trigger: ACCTACTGTGTGAATTTCACTCTGGGAGATGATGCAAGCCTGGCCCTCACCAGCACCCTGATCTCTATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS TCA 72 bp CGGCCGTATCTTCGAAAGACAGTCACTTCCATGACCTaGGGGCCAGCTGTCAAGTTGACTGTGTTTATAGAA +
Preference number: 6 (lower is better)
Translates to: RPYLRKTVTSMT*GPAVKLTVFIE
Trigger: TTCTATAAACACAGTCAACTTGACAGCTGGCCCTCAGGTCATGGAAGTGACTGTCTTTCGAAGATACGGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS GCA 72 bp CACATACACATCTTTCACCTTCGAGATGGGAATGTATaGCCGGCCGTATCTTCGAAAGACAGTCACTTCCAT +
Preference number: 6 (lower is better)
Translates to: HIHIFHLRDGNV*PAVSSKDSHFH
Trigger: ATGGAAGTGACTGTCTTTCGAAGATACGGCCGGGCATACATTCCCATCTCGAAGGTGAAAGATGTGTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS TCA 72 bp AGCTGTCAAGTTGACTGTGTTTATAGAAACCCGTGCTaGACACCGACCCAGTTTTTGGAAATACTGGCCAAG +
Preference number: 6 (lower is better)
Translates to: SCQVDCVYRNPC*TPTQFLEILAK
Trigger: CTTGGCCAGTATTTCCAAAAACTGGGTCGGTGTTCAGCACGGGTTTCTATAAACACAGTCAACTTGACAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CCA 72 bp GATCTGTTATCACATACACATCTTTCACCTTCGAGATaGGAATGTATGCCCGGCCGTATCTTCGAAAGACAG +
Preference number: 6 (lower is better)
Translates to: DLLSHTHLSPSR*ECMPGRIFERQ
Trigger: CTGTCTTTCGAAGATACGGCCGGGCATACATTCCCATCTCGAAGGTGAAAGATGTGTATGTGATAACAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CAA 72 bp GGGCAGTTTCCTATTGGCTTGTACGCCTTGTGTTTTTaGTACAGCAAGATGGTAACCATGGTGACAAGCACA +
Preference number: 6 (lower is better)
Translates to: GQFPIGLYALCF*YSKMVTMVTST
Trigger: TGTGCTTGTCACCATGGTTACCATCTTGCTGTACAAAAAACACAAGGCGTACAAGCCAATAGGAAACTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031840.10
CDS TCA 72 bp TCATTCTTCTGGGACATGGTCACGAATACAGGGATCTaGTCTGTTATCACATACACATCTTTCACCTTCGAG +
Preference number: 6 (lower is better)
Translates to: SFFWDMVTNTGI*SVITYTSFTFE
Trigger: CTCGAAGGTGAAAGATGTGTATGTGATAACAGATCAGATCCCTGTATTCGTGACCATGTCCCAGAAGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2
CDS CCA 72 bp TCTCATCAGACAAGTTCCTGTCATTCTTCTGGGACATaGTCACGAATACAGGGATCTGATCTGTTATCACAT +
Preference number: 6 (lower is better)
Translates to: SHQTSSCHSSGT*SRIQGSDLLSH
Trigger: ATGTGATAACAGATCAGATCCCTGTATTCGTGACCATGTCCCAGAAGAATGACAGGAACTTGTCTGATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031840.10
ENSMUST00000204260.2