Pregenerated sensors for GPN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029464Ensembl transcript IDs: ENSMUST00000031420.11, ENSMUST00000123537.2, ENSMUST00000127608.8, ENSMUST00000146698.2, ENSMUST00000151173.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCGAAGTCGATGTGCTGGAGCACGATGTTCATGCTCTCCTCGTCTaGCTGGTCGTATGGCAGGAAGCGGACCATGCTGTAGTCATCCAC | + |
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Preference number: 1 (lower is better) Translates to: GEVDVLEHDVHALLV*LVVWQEADHAVVIH Trigger: GTGGATGACTACAGCATGGTCCGCTTCCTGCCATACGACCAGTCAGACGAGGAGAGCATGAACATCGTGCTCCAGCACATCGACTTCGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
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| 3UTR GCA 90 bp | TCATGCTCTCCTCGTCTGACTGGTCGTATGGCAGGAAGCGGACCATaGTGTAGTCATCCACCAGGCCACACACGGCCTTCGTCAACTTCT | + |
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Preference number: 1 (lower is better) Translates to: SCSPRLTGRMAGSGP*CSHPPGHTRPSSTS Trigger: AGAAGTTGACGAAGGCCGTGTGTGGCCTGGTGGATGACTACAGCATGGTCCGCTTCCTGCCATACGACCAGTCAGACGAGGAGAGCATGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
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| 3UTR TCA 90 bp | TCTTCATGCTCCCTCGGCTCCTTGAACTCCAAGTCCTCCCCGTACTaGATGGCGAAGTCGATGTGCTGGAGCACGATGTTCATGCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: SSCSLGSLNSKSSPY*MAKSMCWSTMFMLS Trigger: GGAGAGCATGAACATCGTGCTCCAGCACATCGACTTCGCCATTCAGTACGGGGAGGACTTGGAGTTCAAGGAGCCGAGGGAGCATGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
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| 3UTR TCA 90 bp | CATCAAACATGGAGGAAGACTCTTCTTCATGCTCCCTCGGCTCCTTaGACTCCAAGTCCTCCCCGTACTGAATGGCGAAGTCGATGTGCT | + |
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Preference number: 1 (lower is better) Translates to: HQTWRKTLLHAPSAP*TPSPPRTEWRSRCA Trigger: AGCACATCGACTTCGCCATTCAGTACGGGGAGGACTTGGAGTTCAAGGAGCCGAGGGAGCATGAAGAAGAGTCTTCCTCCATGTTTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 ENSMUST00000146698.2 |
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| 3UTR GCA 90 bp | CACAAGCGGGATGGTGGCTTCCTACGTAGTCAACCTCACTCATTCTaGCGTTCTTGGAAATACTCATCAAACATGGAGGAAGACTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: HKRDGGFLRSQPHSF*RSWKYSSNMEEDSS Trigger: AGAAGAGTCTTCCTCCATGTTTGATGAGTATTTCCAAGAACGGCAGAATGAGTGAGGTTGACTACGTAGGAAGCCACCATCCCGCTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127608.8 ENSMUST00000146698.2 ENSMUST00000151173.2 |
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| 3UTR CCA 90 bp | TCATCCACCAGGCCACACACGGCCTTCGTCAACTTCTTAAACTTTTaGCTTCTTAAGTCACCGGTTGAATCGTCTATCAGAGAGTACATG | + |
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Preference number: 1 (lower is better) Translates to: SSTRPHTAFVNFLNF*LLKSPVESSIREYM Trigger: CATGTACTCTCTGATAGACGATTCAACCGGTGACTTAAGAAGCCAAAAGTTTAAGAAGTTGACGAAGGCCGTGTGTGGCCTGGTGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
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| 3UTR TCA 90 bp | GTTACATTGGCTCCAATTGTGCGCGCATGCACACATACACACTGGTaGTGTACGTGTGTGGCTAGGTTGGTTTATATTATACACAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: VTLAPIVRACTHTHW*CTCVARLVYIIHKS Trigger: AGACTTGTGTATAATATAAACCAACCTAGCCACACACGTACATCACCAGTGTGTATGTGTGCATGCGCGCACAATTGGAGCCAATGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 |
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| 3UTR GCA 90 bp | ACAAAATATTCAATTGTAAAAATGAGGTTACATTGGCTCCAATTGTaGGCGCATGCACACATACACACTGGTGATGTACGTGTGTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: TKYSIVKMRLHWLQL*AHAHIHTGDVRVWL Trigger: TAGCCACACACGTACATCACCAGTGTGTATGTGTGCATGCGCGCACAATTGGAGCCAATGTAACCTCATTTTTACAATTGAATATTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 |
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| 3UTR CCA 90 bp | CAATTGTGCGCGCATGCACACATACACACTGGTGATGTACGTGTGTaGCTAGGTTGGTTTATATTATACACAAGTCTTTGTGCATTAATT | + |
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Preference number: 1 (lower is better) Translates to: QLCAHAHIHTGDVRV*LGWFILYTSLCALI Trigger: AATTAATGCACAAAGACTTGTGTATAATATAAACCAACCTAGCCACACACGTACATCACCAGTGTGTATGTGTGCATGCGCGCACAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 |
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| 3UTR CAA 90 bp | CGGCAGTTTCAGAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTaGCTCACGCAGCGGCTCAGCCTAGAGCCCAGCACGCTTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: RQFQSSEHKPGSLTH*LTQRLSLEPSTLPR Trigger: TCTGGGAAGCGTGCTGGGCTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTCTGAAACTGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 ENSMUST00000151173.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCAGAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCCAGGATAAAGTCTCCTaGAAGAGCGGCAGTTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SFRAQSTSQARSLTCSRSQDKVS*KSGSFR Trigger: TCTGAAACTGCCGCTCTTTCAGGAGACTTTATCCTG...GCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTCTGAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 ENSMUST00000151173.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTCTCCTCGTCTGACTGGTCGTATGGCAGGAAGCGGACCATGCTGTAGTCATGCAGAGAATGTCACTTaGTTTCTACCCAGGACTGAA | + |
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Preference number: 2 (lower is better) Translates to: CSPRLTGRMAGSGPCCSHAENVT*FLPRTE Trigger: TTCAGTCCTGGGTAGAAAGCAAGTGACATTCTCTGC...ATGACTACAGCATGGTCCGCTTCCTGCCATACGACCAGTCAGACGAGGAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123537.2 |
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| 3UTR-3UTR TCA 90 bp | ATACTCATCAAACATGGAGGAAGACTCTTCTTCATGCTCCCTCGGCTCCTTGAACAGGATAAAGTCTCCTaGAAGAGCGGCAGTTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: ILIKHGGRLFFMLPRLLEQDKVS*KSGSFR Trigger: TCTGAAACTGCCGCTCTTTCAGGAGACTTTATCCTG...TTCAAGGAGCCGAGGGAGCATGAAGAAGAGTCTTCCTCCATGTTTGATGAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127608.8 ENSMUST00000146698.2 |
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| 3UTR-3UTR GCA 90 bp | CACCGGTTGAATCGTCTATCAGAGAGTACATGTCTGGATCTAGAAACTTCTCAACATGGCACTCAAGGCTaGCAGGATGCCGGAGATAAA | + |
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Preference number: 2 (lower is better) Translates to: HRLNRLSESTCLDLETSQHGTQG*QDAGDK Trigger: TTTATCTCCGGCATCCTGGCAGCCTTGAGTGCCATG...TTGAGAAGTTTCTAGATCCAGACATGTACTCTCTGATAGACGATTCAACCGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123537.2 |
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| 3UTR-3UTR CCA 90 bp | GGATCTAGAAACTTCTCAATCTCCTTCTTGGCTTTCTTACTCAGCAGGTCCATCTCTCTAGAGAAACCATaGCACTCAAGGCTGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GSRNFSISFLAFLLSRSISLEKP*HSRLPG Trigger: TCCTGGCAGCCTTGAGTGCCATGGTTTCTCTAGAGA...GATGGACCTGCTGAGTAAGAAAGCCAAGAAGGAGATTGAGAAGTTTCTAGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123537.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCTAGGCTCGCTCACTCACTaGCTCACGCAGCGGCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: SEHKPGSLTHLLTQRLSLGSLTH*LTQRLS Trigger: GCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCC...TAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGA 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 ENSMUST00000151173.2 |
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| 3UTR GCA 72 bp | CCTCGTCTGACTGGTCGTATGGCAGGAAGCGGACCATaGTGTAGTCATCCACCAGGCCACACACGGCCTTCG | + |
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Preference number: 3 (lower is better) Translates to: PRLTGRMAGSGP*CSHPPGHTRPS Trigger: CGAAGGCCGTGTGTGGCCTGGTGGATGACTACAGCATGGTCCGCTTCCTGCCATACGACCAGTCAGACGAGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
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| 3UTR-3UTR CAA 90 bp | GCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCTAGAGCCTTACATTGGCTCCAATaGTGCGCGCATGCACACATA | + |
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Preference number: 3 (lower is better) Translates to: AQARLAHSLAHAAAQPRALHWLQ*CAHAHI Trigger: TATGTGTGCATGCGCGCACAATTGGAGCCAATGTAA...GGCTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGTTACATTGGCTCCAATaGTGCGCGCATGCACACATA | + |
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Preference number: 3 (lower is better) Translates to: ELRAQARLAHSLAHAAAQLHWLQ*CAHAHI Trigger: TATGTGTGCATGCGCGCACAATTGGAGCCAATGTAA...CTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 |
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| 3UTR TCA 72 bp | GATGTGCTGGAGCACGATGTTCATGCTCTCCTCGTCTaGCTGGTCGTATGGCAGGAAGCGGACCATGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: DVLEHDVHALLV*LVVWQEADHAV Trigger: TACAGCATGGTCCGCTTCCTGCCATACGACCAGTCAGACGAGGAGAGCATGAACATCGTGCTCCAGCACATC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
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| 3UTR-3UTR CAA 90 bp | CACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCTAGAGCCCACGTGTGTGGCTAGGTaGGTTTATATTATACACAAG | + |
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Preference number: 3 (lower is better) Translates to: HKPGSLTHLLTQRLSLEPTCVAR*VYIIHK Trigger: CTTGTGTATAATATAAACCAACCTAGCCACACACGT...GGGCTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCAGGAAGCGGACCATGCTGTAGTCATCCACCAGGCCACACACGGCCTTCGTTTCTTAAGTCACCGGTaGAATCGTCTATCAGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: WQEADHAVVIHQATHGLRFLSHR*NRLSES Trigger: ACTCTCTGATAGACGATTCAACCGGTGACTTAAGAA...ACGAAGGCCGTGTGTGGCCTGGTGGATGACTACAGCATGGTCCGCTTCCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
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| 3UTR GCA 72 bp | AAATACTCATCAAACATGGAGGAAGACTCTTCTTCATaGTCCCTCGGCTCCTTGAACTCCAAGTCCTCCCCG | + |
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Preference number: 3 (lower is better) Translates to: KYSSNMEEDSSS*SLGSLNSKSSP Trigger: CGGGGAGGACTTGGAGTTCAAGGAGCCGAGGGAGCATGAAGAAGAGTCTTCCTCCATGTTTGATGAGTATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127608.8 ENSMUST00000146698.2 |
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| 3UTR GCA 72 bp | GCCGGAGATAAACCAGACCGAGCAGAGAATGTCACTTaGTTTCTACCCAGGACTGAAAAATCTACAAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: AGDKPDRAENVT*FLPRTEKSTRD Trigger: ATCTCTTGTAGATTTTTCAGTCCTGGGTAGAAAGCAAGTGACATTCTCTGCTCGGTCTGGTTTATCTCCGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123537.2 |
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| 3UTR CCA 72 bp | AGGCCACACACGGCCTTCGTCAACTTCTTAAACTTTTaGCTTCTTAAGTCACCGGTTGAATCGTCTATCAGA | + |
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Preference number: 3 (lower is better) Translates to: RPHTAFVNFLNF*LLKSPVESSIR Trigger: TCTGATAGACGATTCAACCGGTGACTTAAGAAGCCAAAAGTTTAAGAAGTTGACGAAGGCCGTGTGTGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
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| 3UTR GCA 72 bp | TCAATTGTAAAAATGAGGTTACATTGGCTCCAATTGTaGGCGCATGCACACATACACACTGGTGATGTACGT | + |
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Preference number: 3 (lower is better) Translates to: SIVKMRLHWLQL*AHAHIHTGDVR Trigger: ACGTACATCACCAGTGTGTATGTGTGCATGCGCGCACAATTGGAGCCAATGTAACCTCATTTTTACAATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 |
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| 3UTR CCA 72 bp | GCGCATGCACACATACACACTGGTGATGTACGTGTGTaGCTAGGTTGGTTTATATTATACACAAGTCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: AHAHIHTGDVRV*LGWFILYTSLC Trigger: ACAAAGACTTGTGTATAATATAAACCAACCTAGCCACACACGTACATCACCAGTGTGTATGTGTGCATGCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 |
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| CDS-3UTR TCA 90 bp | GCGGCTCAGCCTAGAGCCCAGCACGCTTCCCAGACGCAGCGGCGGCTTCCCGCGCCTGGACAGATCGGTTaGGGGCTTCACAGTGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: AAQPRAQHASQTQRRLPAPGQIG*GLHSAE Trigger: TTCAGCACTGTGAAGCCCTCAACCGATCTGTCCAGG...CGCGGGAAGCCGCCGCTGCGTCTGGGAAGCGTGCTGGGCTCTAGGCTGAGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR GCA 90 bp | CTCACGCAGCGGCTCAGCCTAGAGCCCAGCACGCTTCCCAGACGCAGCGGCGGCGCAGGAAGCGGACCATaGTGTAGTCATCCACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LTQRLSLEPSTLPRRSGGAGSGP*CSHPPG Trigger: GCCTGGTGGATGACTACAGCATGGTCCGCTTCCTGC...GCCGCCGCTGCGTCTGGGAAGCGTGCTGGGCTCTAGGCTGAGCCGCTGCGTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000151173.2 |
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| CDS-3UTR TCA 90 bp | CACGCAGCGGCTCAGCCTAGAGCCCAGCACGCTTCCCAGACGCAGCGGCGGCTTGGACCAGCTGCTTCATaGCAGGCAGGTGGGTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: HAAAQPRAQHASQTQRRLGPAAS*QAGGCR Trigger: TCTACACCCACCTGCCTGTCATGAAGCAGCTGGTCC...AAGCCGCCGCTGCGTCTGGGAAGCGTGCTGGGCTCTAGGCTGAGCCGCTGCGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR GCA 90 bp | CACGCAGCGGCTCAGCCTAGAGCCCAGCACGCTTCCCAGACGCAGCGGCGGCTTAGCTGCTGGACCAGCTaGTTCATGACAGGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HAAAQPRAQHASQTQRRLSCWTS*FMTGRW Trigger: CCACCTGCCTGTCATGAAGCAGCTGGTCCAGCAGCT...AAGCCGCCGCTGCGTCTGGGAAGCGTGCTGGGCTCTAGGCTGAGCCGCTGCGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR GCA 90 bp | AGAGCCCAGCACGCTTCCCAGACGCAGCGGCGGCTTCCCGCGGTTACATCCTCCGCAGGAAGCGGACCATaGTGTAGTCATCCACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RAQHASQTQRRLPAVTSSAGSGP*CSHPPG Trigger: GCCTGGTGGATGACTACAGCATGGTCCGCTTCCTGC...GGAGGATGTAACCGCGGGAAGCCGCCGCTGCGTCTGGGAAGCGTGCTGGGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000151173.2 |
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| 3UTR CAA 72 bp | CAGAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTaGCTCACGCAGCGGCTCAGCCTAGAGCCCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: QSSEHKPGSLTH*LTQRLSLEPST Trigger: CGTGCTGGGCTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 ENSMUST00000151173.2 |
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| CDS-3UTR GCA 90 bp | AGCCTAGAGCCCAGCACGCTTCCCAGACGCAGCGGCGGCTTCCCGCGGTTACATACTCGGAACTCCCACTaGTCAAGCTGCTGGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLEPSTLPRRSGGFPRLHTRNSH*SSCWTS Trigger: GCTGGTCCAGCAGCTTGAGCAGTGGGAGTTCCGAGT...ATGTAACCGCGGGAAGCCGCCGCTGCGTCTGGGAAGCGTGCTGGGCTCTAGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR CCA 90 bp | CACGCAGCGGCTCAGCCTAGAGCCCAGCACGCTTCCCAGACGCAGCGGCGGCTTCACAGTGCTGAACCATaGTGGAACAGTAGGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: HAAAQPRAQHASQTQRRLHSAEP*WNSRCS Trigger: AGAGCACCTACTGTTCCACCATGGTTCAGCACTGTG...AAGCCGCCGCTGCGTCTGGGAAGCGTGCTGGGCTCTAGGCTGAGCCGCTGCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR CCA 90 bp | TCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCTAGAGCCCAGCACGCTTCCCCTCTCCTCGTCTGACTaGTCGTATGGCAGGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: SLTHLLTQRLSLEPSTLPLSSSD*SYGRKR Trigger: CCGCTTCCTGCCATACGACCAGTCAGACGAGGAGAG...GGGAAGCGTGCTGGGCTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000146698.2 ENSMUST00000151173.2 |
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| CDS-3UTR CCA 90 bp | GCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCTAGAGCCCTCTCCTCGTCTGACTaGTCGTATGGCAGGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: AQARLAHSLAHAAAQPRALSSSD*SYGRKR Trigger: CCGCTTCCTGCCATACGACCAGTCAGACGAGGAGAG...GGCTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000146698.2 ENSMUST00000151173.2 |
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| CDS-3UTR GCA 90 bp | AGCCTAGAGCCCAGCACGCTTCCCAGACGCAGCGGCGGCTTCCCGCGGTTACATTGGCAAAGTACTCCATaGAGAAGACCAGGCCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: SLEPSTLPRRSGGFPRLHWQSTP*RRPGLR Trigger: ACGGAGGCCTGGTCTTCTGCATGGAGTACTTTGCCA...ATGTAACCGCGGGAAGCCGCCGCTGCGTCTGGGAAGCGTGCTGGGCTCTAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR GCA 90 bp | CTCACTCACTTGCTCACGCAGCGGCTCAGCCTAGAGCCCAGCACGCTTCCCAGAGTAGTTGAAGTGTTCTaGCGCCGGGTCCAGGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: LTHLLTQRLSLEPSTLPRVVEVF*RRVQVD Trigger: GTCAACCTGGACCCGGCGGCAGAACACTTCAACTAC...TCTGGGAAGCGTGCTGGGCTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR GCA 90 bp | TCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCTAGAGCCCAGCACGCTTCCCTGGCAAAGTACTCCATaGAGAAGACCAGGCCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: SLTHLLTQRLSLEPSTLPWQSTP*RRPGLR Trigger: ACGGAGGCCTGGTCTTCTGCATGGAGTACTTTGCCA...GGGAAGCGTGCTGGGCTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR GCA 90 bp | TCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCTAGAGCCCAGCACGCTTCCCCATGGCACTCAAGGCTaGCAGGATGCCGGAGATAAA | + |
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Preference number: 4 (lower is better) Translates to: SLTHLLTQRLSLEPSTLPHGTQG*QDAGDK Trigger: TTTATCTCCGGCATCCTGGCAGCCTTGAGTGCCATG...GGGAAGCGTGCTGGGCTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR CCA 90 bp | AGCCTAGAGCCCAGCACGCTTCCCAGACGCAGCGGCGGCTTCCCGCGGTTACATAGTGCTGAACCATGGTaGAACAGTAGGTGCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SLEPSTLPRRSGGFPRLHSAEPW*NSRCSS Trigger: GGAAGAGCACCTACTGTTCCACCATGGTTCAGCACT...ATGTAACCGCGGGAAGCCGCCGCTGCGTCTGGGAAGCGTGCTGGGCTCTAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR CCA 90 bp | AGCCTAGAGCCCAGCACGCTTCCCAGACGCAGCGGCGGCTTCCCGCGGTTACATTCTCTAGAGAAACCATaGCACTCAAGGCTGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLEPSTLPRRSGGFPRLHSLEKP*HSRLPG Trigger: TCCTGGCAGCCTTGAGTGCCATGGTTTCTCTAGAGA...ATGTAACCGCGGGAAGCCGCCGCTGCGTCTGGGAAGCGTGCTGGGCTCTAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR TCA 90 bp | AGTCTCCTGAAAGAGCGGCAGTTTCAGAGCTCAGAGCACAAGCCAGGCTCGCTCGGACCCCTCTTGAGCTaGCACAGGGAAGCCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLKERQFQSSEHKPGSLGPLLS*HREAQL Trigger: AAGCTGGGCTTCCCTGTGTCAGCTCAAGAGGGGTCC...GAGCGAGCCTGGCTTGTGCTCTGAGCTCTGAAACTGCCGCTCTTTCAGGAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151173.2 |
||
| CDS-3UTR CCA 90 bp | GCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCTAGAGCCTCTCTAGAGAAACCATaGCACTCAAGGCTGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQARLAHSLAHAAAQPRASLEKP*HSRLPG Trigger: TCCTGGCAGCCTTGAGTGCCATGGTTTCTCTAGAGA...GGCTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGAAGCGGACCATGCTGTAGTCATCCACCAGGCCACACACGGCCTTCGTTGGCAAAGTACTCCATaGAGAAGACCAGGCCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: WQEADHAVVIHQATHGLRWQSTP*RRPGLR Trigger: ACGGAGGCCTGGTCTTCTGCATGGAGTACTTTGCCA...ACGAAGGCCGTGTGTGGCCTGGTGGATGACTACAGCATGGTCCGCTTCCTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
||
| CDS-3UTR GCA 90 bp | GCACGATGTTCATGCTCTCCTCGTCTGACTGGTCGTATGGCAGGAAGCGGACCAAGCTGCTGGACCAGCTaGTTCATGACAGGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARCSCSPRLTGRMAGSGPSCWTS*FMTGRW Trigger: CCACCTGCCTGTCATGAAGCAGCTGGTCCAGCAGCT...TGGTCCGCTTCCTGCCATACGACCAGTCAGACGAGGAGAGCATGAACATCGTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
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| CDS-3UTR GCA 90 bp | CCTGAAAGAGCGGCAGTTTCAGAGCTCAGAGCACAAGCCAGGCTCGCTCACTCAACTCGGAACTCCCACTaGTCAAGCTGCTGGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PERAAVSELRAQARLAHSTRNSH*SSCWTS Trigger: GCTGGTCCAGCAGCTTGAGCAGTGGGAGTTCCGAGT...TGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTCTGAAACTGCCGCTCTTTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
||
| CDS-3UTR CCA 90 bp | GAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCTAGAGAGTGCTGAACCATGGTaGAACAGTAGGTGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EHKPGSLTHLLTQRLSLESAEPW*NSRCSS Trigger: GGAAGAGCACCTACTGTTCCACCATGGTTCAGCACT...CTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCTACACTGCTCAAGCTGCTaGACCAGCTGCTTCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: SEHKPGSLTHLLTQRLSLHCSSC*TSCFMT Trigger: TGTCATGAAGCAGCTGGTCCAGCAGCTTGAGCAGTG...TAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
||
| CDS-3UTR TCA 90 bp | GCACGATGTTCATGCTCTCCTCGTCTGACTGGTCGTATGGCAGGAAGCGGACCACCTGGACAGATCGGTTaGGGGCTTCACAGTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ARCSCSPRLTGRMAGSGPPGQIG*GLHSAE Trigger: TTCAGCACTGTGAAGCCCTCAACCGATCTGTCCAGG...TGGTCCGCTTCCTGCCATACGACCAGTCAGACGAGGAGAGCATGAACATCGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127608.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAGCGGCAGTTTCAGAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCTCCTCGTCTGACTaGTCGTATGGCAGGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KERQFQSSEHKPGSLTHLLSSSD*SYGRKR Trigger: CCGCTTCCTGCCATACGACCAGTCAGACGAGGAGAG...CAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTCTGAAACTGCCGCTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000146698.2 ENSMUST00000151173.2 |
||
| CDS-3UTR CCA 90 bp | TCACTTGCTCACGCAGCGGCTCAGCCTAGAGCCCAGCACGCTTCCCAGACGCAGGCCAGTCAAAGTTATTaGCAAAGTACTCCATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLAHAAAQPRAQHASQTQASQSY*QSTPCR Trigger: TCTGCATGGAGTACTTTGCCAATAACTTTGACTGGC...CTGCGTCTGGGAAGCGTGCTGGGCTCTAGGCTGAGCCGCTGCGTGAGCAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCGCCAGTCAAAGTTATTaGCAAAGTACTCCATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQSTSQARSLTCSRSGSAASQSY*QSTPCR Trigger: TCTGCATGGAGTACTTTGCCAATAACTTTGACTGGC...GGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
||
| CDS-3UTR CCA 90 bp | GCGAAGTCGATGTGCTGGAGCACGATGTTCATGCTCTCCTCGTCTGACTGGTCGCACTGCTCAAGCTGCTaGACCAGCTGCTTCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: AKSMCWSTMFMLSSSDWSHCSSC*TSCFMT Trigger: TGTCATGAAGCAGCTGGTCCAGCAGCTTGAGCAGTG...CGACCAGTCAGACGAGGAGAGCATGAACATCGTGCTCCAGCACATCGACTTCGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTGGAAATACTCATCAAACATGGAGGAAGACTCTTCTTCATGCTCCCTCGGTGCCCGCGGGGCCCATaGCGAGCTGCGCATATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLEILIKHGGRLFFMLPRCPRGP*RAAHIE Trigger: CTCGATATGCGCAGCTCGTCATGGGCCCCGCGGGCA...CCGAGGGAGCATGAAGAAGAGTCTTCCTCCATGTTTGATGAGTATTTCCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127608.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGAAGCGGACCATGCTGTAGTCATCCACCAGGCCACACACGGCCTTCGTGCCAGTCAAAGTTATTaGCAAAGTACTCCATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WQEADHAVVIHQATHGLRASQSY*QSTPCR Trigger: TCTGCATGGAGTACTTTGCCAATAACTTTGACTGGC...ACGAAGGCCGTGTGTGGCCTGGTGGATGACTACAGCATGGTCCGCTTCCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTGAGCTCAATCTGACCTaGACAGTCAAAAAGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SELRAQARLAHSLAHAAAELNLT*TVKKDV Trigger: TACATCCTTTTTGACTGTCCAGGTCAGATTGAGCTC...AGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR CCA 90 bp | GAATGGCGAAGTCGATGTGCTGGAGCACGATGTTCATGCTCTCCTCGTCTGACTCACTGCTCAAGCTGCTaGACCAGCTGCTTCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: EWRSRCAGARCSCSPRLTHCSSC*TSCFMT Trigger: TGTCATGAAGCAGCTGGTCCAGCAGCTTGAGCAGTG...AGTCAGACGAGGAGAGCATGAACATCGTGCTCCAGCACATCGACTTCGCCATTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
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| CDS-3UTR CCA 90 bp | CAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCTAGAGCCCAGAACTTCTTAAACTTTTaGCTTCTTAAGTCACCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QARLAHSLAHAAAQPRAQNFLNF*LLKSPV Trigger: AACCGGTGACTTAAGAAGCCAAAAGTTTAAGAAGTT...CTGGGCTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000151173.2 |
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| CDS-3UTR CCA 90 bp | GAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGTCATTCTGCCGTTCTTaGAAATACTCATCAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: ELRAQARLAHSLAHAAAQSFCRS*KYSSNM Trigger: CATGTTTGATGAGTATTTCCAAGAACGGCAGAATGA...CTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031420.11 |
||
| CDS-3UTR CCA 90 bp | AGTTTCAGAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGAGCTCAATCTGACCTaGACAGTCAAAAAGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SFRAQSTSQARSLTCSRSELNLT*TVKKDV Trigger: TACATCCTTTTTGACTGTCCAGGTCAGATTGAGCTC...GCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTCTGAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR CCA 90 bp | GAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGAACTTCTTAAACTTTTaGCTTCTTAAGTCACCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ELRAQARLAHSLAHAAAQNFLNF*LLKSPV Trigger: AACCGGTGACTTAAGAAGCCAAAAGTTTAAGAAGTT...CTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000151173.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAATATCCAAACAATAGTGTCAGGATAAAGTCTCCTGAAAGAGCGGCAGTTTGCCCGCGGGGCCCATaGCGAGCTGCGCATATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FKYPNNSVRIKSPERAAVCPRGP*RAAHIE Trigger: CTCGATATGCGCAGCTCGTCATGGGCCCCGCGGGCA...AACTGCCGCTCTTTCAGGAGACTTTATCCTGACACTATTGTTTGGATATTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR GCA 90 bp | ATACTCATCAAACATGGAGGAAGACTCTTCTTCATGCTCCCTCGGCTCCTTGAAGTAGTTGAAGTGTTCTaGCGCCGGGTCCAGGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILIKHGGRLFFMLPRLLEVVEVF*RRVQVD Trigger: GTCAACCTGGACCCGGCGGCAGAACACTTCAACTAC...TTCAAGGAGCCGAGGGAGCATGAAGAAGAGTCTTCCTCCATGTTTGATGAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127608.8 |
||
| CDS-3UTR GCA 90 bp | TGCCGTTCTTGGAAATACTCATCAAACATGGAGGAAGACTCTTCTTCATGCTCCAGCTGCTGGACCAGCTaGTTCATGACAGGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CRSWKYSSNMEEDSSSCSSCWTS*FMTGRW Trigger: CCACCTGCCTGTCATGAAGCAGCTGGTCCAGCAGCT...GGAGCATGAAGAAGAGTCTTCCTCCATGTTTGATGAGTATTTCCAAGAACGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127608.8 |
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| CDS-3UTR GCA 90 bp | CACCGGTTGAATCGTCTATCAGAGAGTACATGTCTGGATCTAGAAACTTCTCAAACTCGGAACTCCCACTaGTCAAGCTGCTGGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRLNRLSESTCLDLETSQTRNSH*SSCWTS Trigger: GCTGGTCCAGCAGCTTGAGCAGTGGGAGTTCCGAGT...TTGAGAAGTTTCTAGATCCAGACATGTACTCTCTGATAGACGATTCAACCGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123537.2 |
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| CDS-3UTR GCA 90 bp | TTCTTGGAAATACTCATCAAACATGGAGGAAGACTCTTCTTCATGCTCCCTCGGCATGGCACTCAAGGCTaGCAGGATGCCGGAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLEILIKHGGRLFFMLPRHGTQG*QDAGDK Trigger: TTTATCTCCGGCATCCTGGCAGCCTTGAGTGCCATG...CCGAGGGAGCATGAAGAAGAGTCTTCCTCCATGTTTGATGAGTATTTCCAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127608.8 |
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| CDS-3UTR TCA 90 bp | GGATCTAGAAACTTCTCAATCTCCTTCTTGGCTTTCTTACTCAGCAGGTCCATCTCCGCAGACCTTGAATaGCTCCACCATGAACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSRNFSISFLAFLLSRSISADLE*LHHELR Trigger: TCTCAGTTCATGGTGGAGTCATTCAAGGTCTGCGGA...GATGGACCTGCTGAGTAAGAAAGCCAAGAAGGAGATTGAGAAGTTTCTAGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123537.2 |
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| CDS-3UTR CCA 90 bp | AGGCCACACACGGCCTTCGTCAACTTCTTAAACTTTTGGCTTCTTAAGTCACCGGAGCTCAATCTGACCTaGACAGTCAAAAAGGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: RPHTAFVNFLNFWLLKSPELNLT*TVKKDV Trigger: TACATCCTTTTTGACTGTCCAGGTCAGATTGAGCTC...CGGTGACTTAAGAAGCCAAAAGTTTAAGAAGTTGACGAAGGCCGTGTGTGGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123537.2 ENSMUST00000127608.8 |
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| CDS-3UTR CCA 90 bp | TCATTCTGCCGTTCTTGGAAATACTCATCAAACATGGAGGAAGACTCTTCTTCACACAGTGCTGAACCATaGTGGAACAGTAGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFCRSWKYSSNMEEDSSSHSAEP*WNSRCS Trigger: AGAGCACCTACTGTTCCACCATGGTTCAGCACTGTG...TGAAGAAGAGTCTTCCTCCATGTTTGATGAGTATTTCCAAGAACGGCAGAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127608.8 |
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| CDS-3UTR CCA 90 bp | TTTAAATATCCAAACAATAGTGTCAGGATAAAGTCTCCTGAAAGAGCGGCAGTTTCCAGGTTGACCACCTaGACAGATCGGTTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKYPNNSVRIKSPERAAVSRLTT*TDRLRA Trigger: AGCCCTCAACCGATCTGTCCAGGTGGTCAACCTGGA...AACTGCCGCTCTTTCAGGAGACTTTATCCTGACACTATTGTTTGGATATTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR CAA 90 bp | CAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCTAGAGCCCAGTGCTCCCTCGGCTCCTaGAACTCCAAGTCCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QARLAHSLAHAAAQPRAQCSLGS*NSKSSP Trigger: CGGGGAGGACTTGGAGTTCAAGGAGCCGAGGGAGCA...CTGGGCTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031420.11 |
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| CDS GCA 90 bp | GATCAGCTCCCGGATGTCGGCCATGACAGGGTAGTTGAAGTGTTCTaGCGCCGGGTCCAGGTTGACCACCTGGACAGATCGGTTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DQLPDVGHDRVVEVF*RRVQVDHLDRSVEG Trigger: GCCCTCAACCGATCTGTCCAGGTGGTCAACCTGGACCCGGCGGCAGAACACTTCAACTACCCTGTCATGGCCGACATCCGGGAGCTGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS-3UTR CAA 90 bp | GAAAGAGCGGCAGTTTCAGAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCCGCCGGGTCCAGGTaGACCACCTGGACAGATCGG | + |
|
Preference number: 5 (lower is better) Translates to: ERAAVSELRAQARLAHSLAAGSR*TTWTDR Trigger: CCGATCTGTCCAGGTGGTCAACCTGGACCCGGCGGC...AAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTCTGAAACTGCCGCTCTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
||
| CDS-3UTR CAA 90 bp | CTCACGCAGCGGCTCAGCCTAGAGCCCAGCACGCTTCCCAGACGCAGCGGCGGCTTCTCAATCTCCTTCTaGGCTTTCTTACTCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTQRLSLEPSTLPRRSGGFSISF*AFLLSR Trigger: CCTGCTGAGTAAGAAAGCCAAGAAGGAGATTGAGAA...GCCGCCGCTGCGTCTGGGAAGCGTGCTGGGCTCTAGGCTGAGCCGCTGCGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 |
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| CDS TCA 90 bp | GCCCAGCTTACCCTCGGCTCCTTGAACTCCAAGTCCTCCCCGTACTaGATGGCGAAGTCGATGTGCTGGAGCACGATGTTCATGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQLTLGSLNSKSSPY*MAKSMCWSTMFMLS Trigger: GGAGAGCATGAACATCGTGCTCCAGCACATCGACTTCGCCATTCAGTACGGGGAGGACTTGGAGTTCAAGGAGCCGAGGGTAAGCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151173.2 |
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| CDS GCA 90 bp | CCAGGCAGTTCTCCAGCCAGTCAAAGTTATTGGCAAAGTACTCCATaGAGAAGACCAGGCCTCCGTTGGGGCCGAACCGCAGAGACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PGSSPASQSYWQSTP*RRPGLRWGRTAETR Trigger: ACGAGTCTCTGCGGTTCGGCCCCAACGGAGGCCTGGTCTTCTGCATGGAGTACTTTGCCAATAACTTTGACTGGCTGGAGAACTGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000123537.2 ENSMUST00000127608.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGATGCCGGAGATAAACTaGAATGACTCCACCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ELRAQARLAHSLAHAAAQMPEIN*NDSTMN Trigger: GTTCATGGTGGAGTCATTCAAGTTTATCTCCGGCAT...CTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGCATGCCGGAGATAAACTaGAATGACTCCACCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSEHKPGSLTHLLTQRLSMPEIN*NDSTMN Trigger: GTTCATGGTGGAGTCATTCAAGTTTATCTCCGGCAT...GCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGTTCTCAATCTCCTTCTaGGCTTTCTTACTCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ELRAQARLAHSLAHAAAQFSISF*AFLLSR Trigger: CCTGCTGAGTAAGAAAGCCAAGAAGGAGATTGAGAA...CTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 |
||
| CDS-3UTR CAA 90 bp | ACCTCACTCATTCTGCCGTTCTTGGAAATACTCATCAAACATGGAGGAAGACTCGCCGCCGGGTCCAGGTaGACCACCTGGACAGATCGG | + |
|
Preference number: 5 (lower is better) Translates to: TSLILPFLEILIKHGGRLAAGSR*TTWTDR Trigger: CCGATCTGTCCAGGTGGTCAACCTGGACCCGGCGGC...GAGTCTTCCTCCATGTTTGATGAGTATTTCCAAGAACGGCAGAATGAGTGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127608.8 |
||
| CDS-3UTR CAA 90 bp | GAGCACAAGCCAGGCTCGCTCACTCACTTGCTCACGCAGCGGCTCAGCCTAGAGTTCTTAAGTCACCGGTaGAATCGTCTATCAGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: EHKPGSLTHLLTQRLSLEFLSHR*NRLSES Trigger: ACTCTCTGATAGACGATTCAACCGGTGACTTAAGAA...CTCTAGGCTGAGCCGCTGCGTGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000151173.2 |
||
| CDS-3UTR CAA 90 bp | AGCGGCAGTTTCAGAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTCAAGCCAGTCAAAGTTATaGGCAAAGTACTCCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGSFRAQSTSQARSLTCSSQSKL*AKYSMQ Trigger: CTGCATGGAGTACTTTGCCAATAACTTTGACTGGCT...TGAGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTCTGAAACTGCCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCGGCAGTTTCAGAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTGCTTTCTCAATCTCCTTCTaGGCTTTCTTACTCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RAAVSELRAQARLAHSLAFSISF*AFLLSR Trigger: CCTGCTGAGTAAGAAAGCCAAGAAGGAGATTGAGAA...AGCAAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTCTGAAACTGCCGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 ENSMUST00000146698.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGAGCGGCAGTTTCAGAGCTCAGAGCACAAGCCAGGCTCGCTCACTCACTTTTCTTAAGTCACCGGTaGAATCGTCTATCAGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ERAAVSELRAQARLAHSLFLSHR*NRLSES Trigger: ACTCTCTGATAGACGATTCAACCGGTGACTTAAGAA...AAGTGAGTGAGCGAGCCTGGCTTGTGCTCTGAGCTCTGAAACTGCCGCTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000151173.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCCGTTCTTGGAAATACTCATCAAACATGGAGGAAGACTCTTCTTCATGCTCTTACCCTCGGCTCCTaGAACTCCAAGTCCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SAVLGNTHQTWRKTLLHALTLGS*NSKSSP Trigger: CGGGGAGGACTTGGAGTTCAAGGAGCCGAGGGTAAG...AGCATGAAGAAGAGTCTTCCTCCATGTTTGATGAGTATTTCCAAGAACGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151173.2 |
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| CDS-3UTR CAA 90 bp | CTAGAAACTTCTCAATCTCCTTCTTGGCTTTCTTACTCAGCAGGTCCATCTTCGAGCCAGTCAAAGTTATaGGCAAAGTACTCCATGCAG | + |
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Preference number: 5 (lower is better) Translates to: LETSQSPSWLSYSAGPSSSQSKL*AKYSMQ Trigger: CTGCATGGAGTACTTTGCCAATAACTTTGACTGGCT...CGAAGATGGACCTGCTGAGTAAGAAAGCCAAGAAGGAGATTGAGAAGTTTCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123537.2 |
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| CDS-3UTR CAA 90 bp | ATTGTAAAAATGAGGTTACATTGGCTCCAATTGTGCGCGCATGCACACATACACAGCCAGTCAAAGTTATaGGCAAAGTACTCCATGCAG | + |
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Preference number: 5 (lower is better) Translates to: IVKMRLHWLQLCAHAHIHSQSKL*AKYSMQ Trigger: CTGCATGGAGTACTTTGCCAATAACTTTGACTGGCT...GTGTATGTGTGCATGCGCGCACAATTGGAGCCAATGTAACCTCATTTTTACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS GCA 72 bp | CCGGATGTCGGCCATGACAGGGTAGTTGAAGTGTTCTaGCGCCGGGTCCAGGTTGACCACCTGGACAGATCG | + |
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Preference number: 6 (lower is better) Translates to: PDVGHDRVVEVF*RRVQVDHLDRS Trigger: CGATCTGTCCAGGTGGTCAACCTGGACCCGGCGGCAGAACACTTCAACTACCCTGTCATGGCCGACATCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031420.11 ENSMUST00000127608.8 |
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| CDS GCA 72 bp | TCTCCAGCCAGTCAAAGTTATTGGCAAAGTACTCCATaGAGAAGACCAGGCCTCCGTTGGGGCCGAACCGCA | + |
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Preference number: 6 (lower is better) Translates to: SPASQSYWQSTP*RRPGLRWGRTA Trigger: TGCGGTTCGGCCCCAACGGAGGCCTGGTCTTCTGCATGGAGTACTTTGCCAATAACTTTGACTGGCTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031420.11 ENSMUST00000123537.2 ENSMUST00000127608.8 |
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