Pregenerated sensors for GPN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028848Ensembl transcript IDs: ENSMUST00000030661.14, ENSMUST00000105899.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATGGAGGTTTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTaGGTCCGTACCTCGCTGAGGTGTCCCCGGCTCTCCAGGCCCATG | + |
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Preference number: 1 (lower is better) Translates to: DGGFLPASALAGRGF*VRTSLRCPRLSRPM Trigger: CATGGGCCTGGAGAGCCGGGGACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAAACCTCCATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| 3UTR CCA 90 bp | AAGGGTGCTATGCGTGGCTTCTTCTCTAGAAGTCCTTTGCAGGGATaGAGGTTTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTG | + |
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Preference number: 1 (lower is better) Translates to: KGAMRGFFSRSPLQG*RFPPSLCSGWTWFL Trigger: CAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAAACCTCCATCCCTGCAAAGGACTTCTAGAGAAGAAGCCACGCATAGCACCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| 3UTR CAA 90 bp | GGATGGAGGTTTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTaGGGTCCGTACCTCGCTGAGGTGTCCCCGGCTCTCCAGGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: GWRFPPSLCSGWTWF*GPYLAEVSPALQAH Trigger: ATGGGCCTGGAGAGCCGGGGACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAAACCTCCATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| 3UTR CCA 72 bp | TTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTaGGTCCGTACCTCGCTGAGGTGTCCCCGGCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: FLPASALAGRGF*VRTSLRCPRLS Trigger: GGAGAGCCGGGGACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| 3UTR CCA 72 bp | CAGGGATGGAGGTTTCCTCCCAGCCTCTGCTCTGGCTaGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: QGWRFPPSLCSG*TWFLGPYLAEV Trigger: CACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAAACCTCCATCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| 3UTR GCA 72 bp | AGGGTGCTATGCGTGGCTTCTTCTCTAGAAGTCCTTTaGAGGGATGGAGGTTTCCTCCCAGCCTCTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: RVLCVASSLEVL*RDGGFLPASAL Trigger: CAGAGCAGAGGCTGGGAGGAAACCTCCATCCCTGCAAAGGACTTCTAGAGAAGAAGCCACGCATAGCACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR GCA 90 bp | GCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTCCCGGGCGGTGTGGTGCGTaGAGAGCTCCACCTGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: ASALAGRGFWVRTSLRCPGRCGA*RAPPGR Trigger: CCGGCCAGGTGGAGCTCTGCACGCACCACACCGCCC...GGGACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR GCA 90 bp | CCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGGCCCGATCACTGCCTaGCCGAAGGCCGTAGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: PPSLCSGWTWFLGPYLAEGPITA*PKAVVG Trigger: CCCGACTACGGCCTTCGGGCAGGCAGTGATCGGGCC...CTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR CCA 90 bp | TTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGAGCAGGCCACCGTTaGGCCCCAGGCGCAGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: FLPASALAGRGFWVRTSLRAGHR*APGAAR Trigger: ACGCGCTGCGCCTGGGGCCCAACGGTGGCCTGCTCT...CAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR GCA 90 bp | ACTGCAGCCCATGTAGAGCCAGTCCTCCTGGGGCTTGAGCTTGTCGGCACCACACGGGGGCCCGATCACTaGCTGCCCGAAGGCCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: TAAHVEPVLLGLELVGTTRGPDH*LPEGRS Trigger: ACTACGGCCTTCGGGCAGGCAGTGATCGGGCCCCCG...TGTGGTGCCGACAAGCTCAAGCCCCAGGAGGACTGGCTCTACATGGGCTGCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR GCA 90 bp | TTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGCGGGGGCCCGATCACTaGCTGCCCGAAGGCCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: FLPASALAGRGFWVRTSLRGPDH*LPEGRS Trigger: ACTACGGCCTTCGGGCAGGCAGTGATCGGGCCCCCG...CAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR GCA 90 bp | CCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGCATGGCTTCCTGCTCTaGGGTCTGCTCCGAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PSLCSGWTWFLGPYLAEVHGFLL*GLLRGC Trigger: GCACCCTCGGAGCAGACCGCAGAGCAGGAAGCCATG...CACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR GCA 90 bp | CTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGCATGGCTTCCTGCTCTaGGGTCTGCTCCGAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LPASALAGRGFWVRTSLRHGFLL*GLLRGC Trigger: GCACCCTCGGAGCAGACCGCAGAGCAGGAAGCCATG...CCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR CCA 90 bp | AGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTCCCTGCGTAGGGCGGTGTaGTGCGTGCAGAGCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: SLCSGWTWFLGPYLAEVSLRRAV*CVQSST Trigger: GGTGGAGCTCTGCACGCACCACACCGCCCTACGCAG...GGACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR TCA 90 bp | CTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGGGACAGCAGTCAGCCTaGGGTCCCACTGGGCCATTT | + |
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Preference number: 4 (lower is better) Translates to: LPASALAGRGFWVRTSLRGQQSA*GPTGPF Trigger: AAATGGCCCAGTGGGACCTCAGGCTGACTGCTGTCC...CCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR TCA 90 bp | CCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGGCACCAGCTTCTCATTaGGCTGTCGGTAGCGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: PSLCSGWTWFLGPYLAEVAPASH*AVGSAG Trigger: TCCGGCGCTACCGACAGCTCAATGAGAAGCTGGTGC...CACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR GCA 90 bp | TTTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTCGTAGGGCGGTGTGGTaGGTGCAGAGCTCCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: FPPSLCSGWTWFLGPYLARRAVW*VQSSTW Trigger: CCAGGTGGAGCTCTGCACGCACCACACCGCCCTACG...AGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR GCA 90 bp | GCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTCCCTGGGGCAATTCCACGTaGAGCATGGTGGCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: ASALAGRGFWVRTSLRCPWGNST*SMVARE Trigger: CTCCCTGGCCACCATGCTGCACGTGGAATTGCCCCA...GGGACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR CCA 90 bp | ACTGCAGCCCATGTAGAGCCAGTCCTCCTGGGGCTTGAGCTTGTCGGCACCACAGTGCAGAGCTCCACCTaGCCGGGGCAGTCGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: TAAHVEPVLLGLELVGTTVQSST*PGQSKR Trigger: TCTCTTCGACTGCCCCGGCCAGGTGGAGCTCTGCAC...TGTGGTGCCGACAAGCTCAAGCCCCAGGAGGACTGGCTCTACATGGGCTGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR CCA 90 bp | CCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGTGGACAGCAGTCAGCTaGCCGGGGCAGTCGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PPSLCSGWTWFLGPYLAEWTAVS*PGQSKR Trigger: TCTCTTCGACTGCCCCGGCCAGCTGACTGCTGTCCA...CTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105899.2 |
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| 3UTR CAA 72 bp | TTTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTaGGGTCCGTACCTCGCTGAGGTGTCCCCGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FPPSLCSGWTWF*GPYLAEVSPAL Trigger: GAGAGCCGGGGACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR TCA 90 bp | TTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGGCACCAGCTTCTCATTaGGCTGTCGGTAGCGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: FLPASALAGRGFWVRTSLAPASH*AVGSAG Trigger: TCCGGCGCTACCGACAGCTCAATGAGAAGCTGGTGC...CAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR GCA 90 bp | TGCGTGGCTTCTTCTCTAGAAGTCCTTTGCAGGGATGGAGGTTTCCTCCCAGCCGGCCCGATCACTGCCTaGCCGAAGGCCGTAGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: CVASSLEVLCRDGGFLPAGPITA*PKAVVG Trigger: CCCGACTACGGCCTTCGGGCAGGCAGTGATCGGGCC...GGCTGGGAGGAAACCTCCATCCCTGCAAAGGACTTCTAGAGAAGAAGCCACGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR GCA 90 bp | CTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTTTGGGAGAAGATGCTaGGTAGGGCGGTGTGGTGCG | + |
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Preference number: 4 (lower is better) Translates to: LPASALAGRGFWVRTSLRFGRRC*VGRCGA Trigger: CGCACCACACCGCCCTACGCAGCATCTTCTCCCAAA...CCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR GCA 90 bp | CCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTTGGGGCAATTCCACGTaGAGCATGGTGGCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PASALAGRGFWVRTSLRCWGNST*SMVARE Trigger: CTCCCTGGCCACCATGCTGCACGTGGAATTGCCCCA...ACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR CCA 90 bp | GCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTCCCGCAGCCAGTCCAGGTTaGCTTCCAGGTACTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: ASALAGRGFWVRTSLRCPAASPG*LPGTPC Trigger: GCATGGAGTACCTGGAAGCCAACCTGGACTGGCTGC...GGGACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGGCAGCCAGTCCAGGTTaGCTTCCAGGTACTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: PSLCSGWTWFLGPYLAEVAASPG*LPGTPC Trigger: GCATGGAGTACCTGGAAGCCAACCTGGACTGGCTGC...CACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR GCA 90 bp | TCCACTGCAGCCCATGTAGAGCCAGTCCTCCTGGGGCTTGAGCTTGTCGGCACCCTTCCAGGTACTCCATaGAGTAGAGCAGGCCACCGT | + |
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Preference number: 4 (lower is better) Translates to: STAAHVEPVLLGLELVGTLPGTP*SRAGHR Trigger: ACGGTGGCCTGCTCTACTGCATGGAGTACCTGGAAG...GGTGCCGACAAGCTCAAGCCCCAGGAGGACTGGCTCTACATGGGCTGCAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR GCA 90 bp | CCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGCCATTTGGGAGAAGATaGTGCGTAGGGCGGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PSLCSGWTWFLGPYLAEVPFGRR*CVGRCG Trigger: ACCACACCGCCCTACGCAGCATCTTCTCCCAAATGG...CACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR CCA 90 bp | AGGGTGCTATGCGTGGCTTCTTCTCTAGAAGTCCTTTGCAGGGATGGAGGTTTCAGAGCAGGCCACCGTTaGGCCCCAGGCGCAGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: RVLCVASSLEVLCRDGGFRAGHR*APGAAR Trigger: ACGCGCTGCGCCTGGGGCCCAACGGTGGCCTGCTCT...GAAACCTCCATCCCTGCAAAGGACTTCTAGAGAAGAAGCCACGCATAGCACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTCCCACTGGGCCATTTaGGAGAAGATGCTGCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: PSLCSGWTWFLGPYLAEVSHWAI*EKMLRR Trigger: CCTACGCAGCATCTTCTCCCAAATGGCCCAGTGGGA...CACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGGAGAGGAGGTTGATGTaGGGCAATTCCACGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PSLCSGWTWFLGPYLAEVERRLM*GNSTCS Trigger: GCTGCACGTGGAATTGCCCCACATCAACCTCCTCTC...CACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR CCA 90 bp | TCCACTGCAGCCCATGTAGAGCCAGTCCTCCTGGGGCTTGAGCTTGTCGGCACCTTGCAGCGGACATCATaGCTTCCAGGCTTCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: STAAHVEPVLLGLELVGTLQRTS*LPGFAA Trigger: AGCAGCGAAGCCTGGAAGCCATGATGTCCGCTGCAA...GGTGCCGACAAGCTCAAGCCCCAGGAGGACTGGCTCTACATGGGCTGCAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTTGCAGCGGACATCATaGCTTCCAGGCTTCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PSLCSGWTWFLGPYLAEVLQRTS*LPGFAA Trigger: AGCAGCGAAGCCTGGAAGCCATGATGTCCGCTGCAA...CACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR GCA 90 bp | AGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTCCGCAGGAACTCACTCATaGCCAGGCAGTACGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SLCSGWTWFLGPYLAEVSAGTHS*PGSTWS Trigger: AGACCACGTACTGCCTGGGCATGAGTGAGTTCCTGC...GGACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR GCA 90 bp | AGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTCCCTTCCAGGTACTCCATaGAGTAGAGCAGGCCACCGT | + |
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Preference number: 4 (lower is better) Translates to: SLCSGWTWFLGPYLAEVSLPGTP*SRAGHR Trigger: ACGGTGGCCTGCTCTACTGCATGGAGTACCTGGAAG...GGACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR CCA 90 bp | TTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGGAGAGGAGGTTGATGTaGGGCAATTCCACGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FLPASALAGRGFWVRTSLERRLM*GNSTCS Trigger: GCTGCACGTGGAATTGCCCCACATCAACCTCCTCTC...CAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR CCA 90 bp | ACTGCAGCCCATGTAGAGCCAGTCCTCCTGGGGCTTGAGCTTGTCGGCACCACAGCCTGTAAGACTCGCTaGATGCTGTCCTTGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TAAHVEPVLLGLELVGTTACKTR*MLSLSW Trigger: CCAGGACAAGGACAGCATCCAGCGAGTCTTACAGGC...TGTGGTGCCGACAAGCTCAAGCCCCAGGAGGACTGGCTCTACATGGGCTGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR CCA 90 bp | TCCACTGCAGCCCATGTAGAGCCAGTCCTCCTGGGGCTTGAGCTTGTCGGCACCGCTAAGTACTTCTCCTaGATGCCCAGAGTGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: STAAHVEPVLLGLELVGTAKYFS*MPRVEE Trigger: CTCCTCCACTCTGGGCATCCAGGAGAAGTACTTAGC...GGTGCCGACAAGCTCAAGCCCCAGGAGGACTGGCTCTACATGGGCTGCAGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGGCTAAGTACTTCTCCTaGATGCCCAGAGTGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PSLCSGWTWFLGPYLAEVAKYFS*MPRVEE Trigger: CTCCTCCACTCTGGGCATCCAGGAGAAGTACTTAGC...CACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR TCA 90 bp | CCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTTCTTGGAGAGGAGGTTaGTGTGGGGCAATTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: PASALAGRGFWVRTSLRCSWRGG*CGAIPR Trigger: ACGTGGAATTGCCCCACATCAACCTCCTCTCCAAGA...ACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR GCA 90 bp | CCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGGTAAGACTCGCTGGATaGTGTCCTTGTCCTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: PSLCSGWTWFLGPYLAEVVRLAG*CPCPGC Trigger: ACATCCAGGACAAGGACAGCATCCAGCGAGTCTTAC...CACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR GCA 90 bp | CCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGAGTACTTCTCCTGGATaGCCAGAGTGGAGGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: PPSLCSGWTWFLGPYLAESTSPG*PEWRRS Trigger: ACTTCTCCTCCACTCTGGGCATCCAGGAGAAGTACT...CTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR CCA 90 bp | TTTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGCCTGTAAGACTCGCTaGATGCTGTCCTTGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FPPSLCSGWTWFLGPYLAACKTR*MLSLSW Trigger: CCAGGACAAGGACAGCATCCAGCGAGTCTTACAGGC...AGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR TCA 90 bp | GCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTCCCAGAGTGGAGGAGAAGTaGAAATCAGCTCCCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASALAGRGFWVRTSLRCPRVEEK*KSAPIA Trigger: TGCAATGGGAGCTGATTTTCACTTCTCCTCCACTCT...GGGACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGACTTGGCTGGGTCTGTaGAGTAGTGAGAATCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PSLCSGWTWFLGPYLAEVTWLGL*SSENPQ Trigger: TTGTGGATTCTCACTACTGCACAGACCCAGCCAAGT...CACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTCCAGTACTTCTCCTGGATaGCCAGAGTGGAGGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLCSGWTWFLGPYLAEVSSTSPG*PEWRRS Trigger: ACTTCTCCTCCACTCTGGGCATCCAGGAGAAGTACT...GGACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTGGAGATGAACTTGGCTaGGTCTGTGCAGTAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PASALAGRGFWVRTSLRCGDELG*VCAVVR Trigger: TCTCACTACTGCACAGACCCAGCCAAGTTCATCTCC...ACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGCCTGGATGCCCAGAGTaGAGGAGAAGTGAAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPASALAGRGFWVRTSLPGCPE*RRSENQ Trigger: CTGATTTTCACTTCTCCTCCACTCTGGGCATCCAGG...CAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGACTTGGCTGGGTCTGTaGAGTAGTGAGAATCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FLPASALAGRGFWVRTSLTWLGL*SSENPQ Trigger: TTGTGGATTCTCACTACTGCACAGACCCAGCCAAGT...CAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGTAAGACTCGCTGGATaGTGTCCTTGTCCTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FPPSLCSGWTWFLGPYLAVRLAG*CPCPGC Trigger: ACATCCAGGACAAGGACAGCATCCAGCGAGTCTTAC...AGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS-3UTR CCA 90 bp | TGCGTGGCTTCTTCTCTAGAAGTCCTTTGCAGGGATGGAGGTTTCCTCCCAGCCAGCCTGAGGTCCCACTaGGCCATTTGGGAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: CVASSLEVLCRDGGFLPASLRSH*AIWEKM Trigger: CATCTTCTCCCAAATGGCCCAGTGGGACCTCAGGCT...GGCTGGGAGGAAACCTCCATCCCTGCAAAGGACTTCTAGAGAAGAAGCCACGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
||
| CDS-3UTR CCA 90 bp | TTTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTCCTGGATGCCCAGAGTaGAGGAGAAGTGAAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPPSLCSGWTWFLGPYLAPGCPE*RRSENQ Trigger: CTGATTTTCACTTCTCCTCCACTCTGGGCATCCAGG...AGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTAGAGTGGAGGAGAAGTaGAAATCAGCTCCCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPPSLCSGWTWFLGPYLARVEEK*KSAPIA Trigger: TGCAATGGGAGCTGATTTTCACTTCTCCTCCACTCT...AGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTAAAATCAGCTCCCATTaGAGCGGACATCATGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPPSLCSGWTWFLGPYLAKISSH*SGHHGF Trigger: GAAGCCATGATGTCCGCTGCAATGGGAGCTGATTTT...AGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| 3UTR CAA 72 bp | AAGGGTGCTATGCGTGGCTTCTTCTCTAGAAGTCCTTaGCAGGGATGGAGGTTTCCTCCCAGCCTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGAMRGFFSRSP*QGWRFPPSLCS Trigger: AGAGCAGAGGCTGGGAGGAAACCTCCATCCCTGCAAAGGACTTCTAGAGAAGAAGCCACGCATAGCACCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
||
| CDS-3UTR TCA 90 bp | AGGGTGCTATGCGTGGCTTCTTCTCTAGAAGTCCTTTGCAGGGATGGAGGTTTCTCTTGGAGAGGAGGTTaGTGTGGGGCAATTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: RVLCVASSLEVLCRDGGFSWRGG*CGAIPR Trigger: ACGTGGAATTGCCCCACATCAACCTCCTCTCCAAGA...GAAACCTCCATCCCTGCAAAGGACTTCTAGAGAAGAAGCCACGCATAGCACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
||
| CDS-3UTR CCA 90 bp | ACCACAAAGGGTGCTATGCGTGGCTTCTTCTCTAGAAGTCCTTTGCAGGGATGGGGAGATGAACTTGGCTaGGTCTGTGCAGTAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TTKGAMRGFFSRSPLQGWGDELG*VCAVVR Trigger: TCTCACTACTGCACAGACCCAGCCAAGTTCATCTCC...CCATCCCTGCAAAGGACTTCTAGAGAAGAAGCCACGCATAGCACCCTTTGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
||
| CDS-3UTR GCA 90 bp | ACCACAAAGGGTGCTATGCGTGGCTTCTTCTCTAGAAGTCCTTTGCAGGGATGGAAAATCAGCTCCCATTaGAGCGGACATCATGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTKGAMRGFFSRSPLQGWKISSH*SGHHGF Trigger: GAAGCCATGATGTCCGCTGCAATGGGAGCTGATTTT...CCATCCCTGCAAAGGACTTCTAGAGAAGAAGCCACGCATAGCACCCTTTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
||
| CDS CCA 90 bp | CCAGGTTGGCTTCCAGGTACTCCATGCAGTAGAGCAGGCCACCGTTaGGCCCCAGGCGCAGCGCGTCCATCACGTCGCCCAGCCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PGWLPGTPCSRAGHR*APGAARPSRRPAPP Trigger: TGGTGGGGCTGGGCGACGTGATGGACGCGCTGCGCCTGGGGCCCAACGGTGGCCTGCTCTACTGCATGGAGTACCTGGAAGCCAACCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS CCA 90 bp | AGTGGCCTCGCAGGGGCTCCAGCTTGGCGCGCAGCCAGTCCAGGTTaGCTTCCAGGTACTCCATGCAGTAGAGCAGGCCACCGTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGLAGAPAWRAASPG*LPGTPCSRAGHRWA Trigger: GGCCCAACGGTGGCCTGCTCTACTGCATGGAGTACCTGGAAGCCAACCTGGACTGGCTGCGCGCCAAGCTGGAGCCCCTGCGAGGCCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGCGCAGGGGCTCCAGCTaGGCGCGCAGCCAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLPASALAGRGFWVRTSLRRGSS*ARSQSR Trigger: CCTGGACTGGCTGCGCGCCAAGCTGGAGCCCCTGCG...CAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS CCA 90 bp | CGGGGCAGTCGAAGAGAAAGTAGTGGCCTCGCAGGGGCTCCAGCTTaGCGCGCAGCCAGTCCAGGTTGGCTTCCAGGTACTCCATGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RGSRRESSGLAGAPA*RAASPGWLPGTPCS Trigger: ACTGCATGGAGTACCTGGAAGCCAACCTGGACTGGCTGCGCGCCAAGCTGGAGCCCCTGCGAGGCCACTACTTTCTCTTCGACTGCCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS-3UTR CAA 90 bp | TGCGTGGCTTCTTCTCTAGAAGTCCTTTGCAGGGATGGAGGTTTCCTCCCAGCCCGCAGGGGCTCCAGCTaGGCGCGCAGCCAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CVASSLEVLCRDGGFLPARRGSS*ARSQSR Trigger: CCTGGACTGGCTGCGCGCCAAGCTGGAGCCCCTGCG...GGCTGGGAGGAAACCTCCATCCCTGCAAAGGACTTCTAGAGAAGAAGCCACGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGCGCAGCCAGTCCAGGTaGGCTTCCAGGTACTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LPASALAGRGFWVRTSLRRSQSR*ASRYSM Trigger: CATGGAGTACCTGGAAGCCAACCTGGACTGGCTGCG...CCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGCGCTGGATGCTGTCCTaGTCCTGGATGTTCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPASALAGRGFWVRTSLRRWMLS*SWMFRG Trigger: CCCCCTGAACATCCAGGACAAGGACAGCATCCAGCG...CCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS TCA 90 bp | AGGAGACCAGGCTGTAGTCTTCCACCAGCTGCACCAGCTTCTCATTaGGCTGTCGGTAGCGCCGGAAGAAAGGGTCAGACGCCAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRPGCSLPPAAPASH*AVGSAGRKGQTPGA Trigger: AGCACCTGGCGTCTGACCCTTTCTTCCGGCGCTACCGACAGCTCAATGAGAAGCTGGTGCAGCTGGTGGAAGACTACAGCCTGGTCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTCAGGCTTCGCTGCTCTaGAACCCCAAAACAGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PASALAGRGFWVRTSLRCQASLL*NPKTVA Trigger: GGCTACTGTTTTGGGGTTCAAGAGCAGCGAAGCCTG...ACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS GCA 90 bp | CTCCTGGATGCCCAGAGTGGAGGAGAAGTGAAAATCAGCTCCCATTaGAGCGGACATCATGGCTTCCAGGCTTCGCTGCTCTTGAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLDAQSGGEVKISSH*SGHHGFQASLLLNP Trigger: GGGGTTCAAGAGCAGCGAAGCCTGGAAGCCATGATGTCCGCTGCAATGGGAGCTGATTTTCACTTCTCCTCCACTCTGGGCATCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR CAA 90 bp | CCTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGTCAATAAGGTCCATCTaGGAGAGGAGGTTGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PPSLCSGWTWFLGPYLAESIRSI*ERRLMW Trigger: CCACATCAACCTCCTCTCCAAGATGGACCTTATTGA...CTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR CAA 90 bp | CTCCCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTCAATAAGGTCCATCTaGGAGAGGAGGTTGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPASALAGRGFWVRTSLRSIRSI*ERRLMW Trigger: CCACATCAACCTCCTCTCCAAGATGGACCTTATTGA...CCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR CAA 90 bp | ACTGCAGCCCATGTAGAGCCAGTCCTCCTGGGGCTTGAGCTTGTCGGCACCACAGAAAATCAGCTCCCATaGCAGCGGACATCATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TAAHVEPVLLGLELVGTTENQLP*QRTSWL Trigger: AAGCCATGATGTCCGCTGCAATGGGAGCTGATTTTC...TGTGGTGCCGACAAGCTCAAGCCCCAGGAGGACTGGCTCTACATGGGCTGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
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| CDS-3UTR CAA 90 bp | CCAGCCTCTGCTCTGGCTGGACGTGGTTTTTGGGTCCGTACCTCGCTGAGGTGTGAAAATCAGCTCCCATaGCAGCGGACATCATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PASALAGRGFWVRTSLRCENQLP*QRTSWL Trigger: AAGCCATGATGTCCGCTGCAATGGGAGCTGATTTTC...ACACCTCAGCGAGGTACGGACCCAAAAACCACGTCCAGCCAGAGCAGAGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS TCA 90 bp | GTAAGACTCGCTGGATGCTGTCCTTGTCCTGGATGTTCAGGGGGATaGAGGAGACCAGGCTGTAGTCTTCCACCAGCTGCACCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VRLAGCCPCPGCSGG*RRPGCSLPPAAPAS Trigger: AGAAGCTGGTGCAGCTGGTGGAAGACTACAGCCTGGTCTCCTTCATCCCCCTGAACATCCAGGACAAGGACAGCATCCAGCGAGTCTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS-3UTR CAA 90 bp | ACCACAAAGGGTGCTATGCGTGGCTTCTTCTCTAGAAGTCCTTTGCAGGGATGGCGCAGCCAGTCCAGGTaGGCTTCCAGGTACTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TTKGAMRGFFSRSPLQGWRSQSR*ASRYSM Trigger: CATGGAGTACCTGGAAGCCAACCTGGACTGGCTGCG...CCATCCCTGCAAAGGACTTCTAGAGAAGAAGCCACGCATAGCACCCTTTGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
||
| CDS-3UTR CAA 90 bp | ACCACAAAGGGTGCTATGCGTGGCTTCTTCTCTAGAAGTCCTTTGCAGGGATGGCGCTGGATGCTGTCCTaGTCCTGGATGTTCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TTKGAMRGFFSRSPLQGWRWMLS*SWMFRG Trigger: CCCCCTGAACATCCAGGACAAGGACAGCATCCAGCG...CCATCCCTGCAAAGGACTTCTAGAGAAGAAGCCACGCATAGCACCCTTTGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
||
| CDS-3UTR CAA 90 bp | AGGGTGCTATGCGTGGCTTCTTCTCTAGAAGTCCTTTGCAGGGATGGAGGTTTCATCTTGGAGAGGAGGTaGATGTGGGGCAATTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: RVLCVASSLEVLCRDGGFILERR*MWGNST Trigger: CGTGGAATTGCCCCACATCAACCTCCTCTCCAAGAT...GAAACCTCCATCCCTGCAAAGGACTTCTAGAGAAGAAGCCACGCATAGCACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
||
| CDS GCA 72 bp | CCACGCGCCGCCCCAGAGCGCGCAGGAACTCACTCATaGCCAGGCAGTACGTGGTCTTCCCCGAGCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRAAPERAGTHS*PGSTWSSPSPG Trigger: CCCCGGGCTCGGGGAAGACCACGTACTGCCTGGGCATGAGTGAGTTCCTGCGCGCTCTGGGGCGGCGCGTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS CCA 72 bp | GAGCGCGCAGGAACTCACTCATGCCCAGGCAGTACGTaGTCTTCCCCGAGCCCGGGGGCCCGATCACTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ERAGTHSCPGST*SSPSPGARSLP Trigger: AGGCAGTGATCGGGCCCCCGGGCTCGGGGAAGACCACGTACTGCCTGGGCATGAGTGAGTTCCTGCGCGCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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| CDS GCA 72 bp | CGCGCAGCCAGTCCAGGTTGGCTTCCAGGTACTCCATaGAGTAGAGCAGGCCACCGTTGGGCCCCAGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: RAASPGWLPGTP*SRAGHRWAPGA Trigger: TGCGCCTGGGGCCCAACGGTGGCCTGCTCTACTGCATGGAGTACCTGGAAGCCAACCTGGACTGGCTGCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS CCA 72 bp | CTTCCAGGTACTCCATGCAGTAGAGCAGGCCACCGTTaGGCCCCAGGCGCAGCGCGTCCATCACGTCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPGTPCSRAGHR*APGAARPSRRP Trigger: TGGGCGACGTGATGGACGCGCTGCGCCTGGGGCCCAACGGTGGCCTGCTCTACTGCATGGAGTACCTGGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS CCA 72 bp | TGGGCCATTTGGGAGAAGATGCTGCGTAGGGCGGTGTaGTGCGTGCAGAGCTCCACCTGGCCGGGGCAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: WAIWEKMLRRAV*CVQSSTWPGQS Trigger: CGACTGCCCCGGCCAGGTGGAGCTCTGCACGCACCACACCGCCCTACGCAGCATCTTCTCCCAAATGGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
||
| CDS GCA 72 bp | GCCATTTGGGAGAAGATGCTGCGTAGGGCGGTGTGGTaGGTGCAGAGCTCCACCTGGCCGGGGCAGTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AIWEKMLRRAVW*VQSSTWPGQSK Trigger: CTTCGACTGCCCCGGCCAGGTGGAGCTCTGCACGCACCACACCGCCCTACGCAGCATCTTCTCCCAAATGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030661.14 |
||
| CDS TCA 72 bp | GGCTGTAGTCTTCCACCAGCTGCACCAGCTTCTCATTaGGCTGTCGGTAGCGCCGGAAGAAAGGGTCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: GCSLPPAAPASH*AVGSAGRKGQT Trigger: CGTCTGACCCTTTCTTCCGGCGCTACCGACAGCTCAATGAGAAGCTGGTGCAGCTGGTGGAAGACTACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS TCA 72 bp | GCTGGATGCTGTCCTTGTCCTGGATGTTCAGGGGGATaGAGGAGACCAGGCTGTAGTCTTCCACCAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AGCCPCPGCSGG*RRPGCSLPPAA Trigger: TGCAGCTGGTGGAAGACTACAGCCTGGTCTCCTTCATCCCCCTGAACATCCAGGACAAGGACAGCATCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS GCA 72 bp | GCCCAGAGTGGAGGAGAAGTGAAAATCAGCTCCCATTaGAGCGGACATCATGGCTTCCAGGCTTCGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AQSGGEVKISSH*SGHHGFQASLL Trigger: GAGCAGCGAAGCCTGGAAGCCATGATGTCCGCTGCAATGGGAGCTGATTTTCACTTCTCCTCCACTCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS CAA 90 bp | TCTCCTGGATGCCCAGAGTGGAGGAGAAGTGAAAATCAGCTCCCATaGCAGCGGACATCATGGCTTCCAGGCTTCGCTGCTCTTGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: SPGCPEWRRSENQLP*QRTSWLPGFAALEP Trigger: GGGTTCAAGAGCAGCGAAGCCTGGAAGCCATGATGTCCGCTGCAATGGGAGCTGATTTTCACTTCTCCTCCACTCTGGGCATCCAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS CCA 72 bp | CCGAGGGTGCTAAGTACTTCTCCTGGATGCCCAGAGTaGAGGAGAAGTGAAAATCAGCTCCCATTGCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PRVLSTSPGCPE*RRSENQLPLQR Trigger: CCGCTGCAATGGGAGCTGATTTTCACTTCTCCTCCACTCTGGGCATCCAGGAGAAGTACTTAGCACCCTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS CAA 72 bp | TGCCCAGAGTGGAGGAGAAGTGAAAATCAGCTCCCATaGCAGCGGACATCATGGCTTCCAGGCTTCGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CPEWRRSENQLP*QRTSWLPGFAA Trigger: AGCAGCGAAGCCTGGAAGCCATGATGTCCGCTGCAATGGGAGCTGATTTTCACTTCTCCTCCACTCTGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS CCA 72 bp | TGTTCAATAAGGTCCATCTTGGAGAGGAGGTTGATGTaGGGCAATTCCACGTGCAGCATGGTGGCCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CSIRSILERRLM*GNSTCSMVARE Trigger: CTCCCTGGCCACCATGCTGCACGTGGAATTGCCCCACATCAACCTCCTCTCCAAGATGGACCTTATTGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
||
| CDS CAA 72 bp | TGCAGCGGACATCATGGCTTCCAGGCTTCGCTGCTCTaGAACCCCAAAACAGTAGCCATTAGCTTTATCCAC | + |
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Preference number: 6 (lower is better) Translates to: CSGHHGFQASLL*NPKTVAISFIH Trigger: GTGGATAAAGCTAATGGCTACTGTTTTGGGGTTCAAGAGCAGCGAAGCCTGGAAGCCATGATGTCCGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030661.14 ENSMUST00000105899.2 |
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