Pregenerated sensors for GPN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064037Ensembl transcript IDs: ENSMUST00000076949.13, ENSMUST00000201053.4, ENSMUST00000202394.4
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGACTGGGTGGCTGAGTCACCTGCCCTGGGGTTCAGTCACAGGCTaGCCTGAAACAGTTCTGCAAAGAGCAAAGCAGTCACCTGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: RTGWLSHLPWGSVTG*PETVLQRAKQSPGR Trigger: CCTTCCAGGTGACTGCTTTGCTCTTTGCAGAACTGTTTCAGGTCAGCCTGTGACTGAACCCCAGGGCAGGTGACTCAGCCACCCAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR GCA 90 bp | GAAAATGGGCTACCTCGTGTGAGCACAGATCACATCCGACCTGGCTaGCCAGGGCACTGTGCTGCCCTCTGTACACACACACTCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: ENGLPRVSTDHIRPG*PGHCAALCTHTLSF Trigger: AAAGGAGAGTGTGTGTGTACAGAGGGCAGCACAGTGCCCTGGGCAGCCAGGTCGGATGTGATCTGTGCTCACACGAGGTAGCCCATTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR CCA 90 bp | CCTGCTGTGCCCACAGACCCAGCTAGTCAAGGTCCAAAGCGTCTCTaGGACAGACGTCCTCTCTGTCCATCAGCAGCAGAAATACTTGAG | + |
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Preference number: 1 (lower is better) Translates to: PAVPTDPASQGPKRL*DRRPLCPSAAEILE Trigger: CTCAAGTATTTCTGCTGCTGATGGACAGAGAGGACGTCTGTCCCAGAGACGCTTTGGACCTTGACTAGCTGGGTCTGTGGGCACAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR TCA 90 bp | TGGGTGGCTGAGTCACCTGCCCTGGGGTTCAGTCACAGGCTGACCTaGAACAGTTCTGCAAAGAGCAAAGCAGTCACCTGGAAGGCTTAT | + |
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Preference number: 1 (lower is better) Translates to: WVAESPALGFSHRLT*NSSAKSKAVTWKAY Trigger: ATAAGCCTTCCAGGTGACTGCTTTGCTCTTTGCAGAACTGTTTCAGGTCAGCCTGTGACTGAACCCCAGGGCAGGTGACTCAGCCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR TCA 90 bp | CCCAGTTTCCCTCAGAGAAGTCACCATTTGGGAGAAAACTGCTCTTaGCTGCAGCCCTGGTTCACAGGAAGGATGTCCTCTGCATGGAGA | + |
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Preference number: 1 (lower is better) Translates to: PSFPQRSHHLGENCS*LQPWFTGRMSSAWR Trigger: TCTCCATGCAGAGGACATCCTTCCTGTGAACCAGGGCTGCAGTCAAGAGCAGTTTTCTCCCAAATGGTGACTTCTCTGAGGGAAACTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR CCA 90 bp | GCGTCAGATCTCTTTACGGATGGTTTTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASDLFTDGFEPPCGC*DLNSGPLEEQSVFL Trigger: TAAGAACACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCAAAACCATCCGTAAAGAGATCTGACGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202394.4 |
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| 3UTR TCA 90 bp | TCTGTCCATCAGCAGCAGAAATACTTGAGTTCAAACGATGATACTTaGAGTTATAGGCTCAGCAGCTATCTCTCAGCTTCCAGAGCGGTG | + |
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Preference number: 1 (lower is better) Translates to: SVHQQQKYLSSNDDT*SYRLSSYLSASRAV Trigger: CACCGCTCTGGAAGCTGAGAGATAGCTGCTGAGCCTATAACTTCAAGTATCATCGTTTGAACTCAAGTATTTCTGCTGCTGATGGACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR TCA 90 bp | AATAAATTTCATCACCTGATCAAATCTGGTAGCAAAGAGGTTGAGTaGGGTCACTATACCTCCGTTTGGCCCAAGTCCATATTGCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: NKFHHLIKSGSKEVE*GHYTSVWPKSILLH Trigger: ATGAAGCAATATGGACTTGGGCCAAACGGAGGTATAGTGACCTCACTCAACCTCTTTGCTACCAGATTTGATCAGGTGATGAAATTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAAGTTGCCTTTCCCAAGTAGAGGGGGTAGGGGTGTTGGGCTCCACAGGCCCCAGGGCACTGTGCTaGCCTCTGTACACACACACT | + |
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Preference number: 2 (lower is better) Translates to: RGSCLSQVEGVGVLGSTGPRALC*PLYTHT Trigger: AGTGTGTGTGTACAGAGGGCAGCACAGTGCCCTGGG...GCCTGTGGAGCCCAACACCCCTACCCCCTCTACTTGGGAAAGGCAACTTCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAAGTTGCCTTTCCCAAGTAGAGGGGGTAGGGGTGTTGGGCTCCACAGGCAGCAAAGCAGTCACCTaGAAGGCTTATGAGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: RGSCLSQVEGVGVLGSTGSKAVT*KAYEPA Trigger: GGCTGGCTCATAAGCCTTCCAGGTGACTGCTTTGCT...GCCTGTGGAGCCCAACACCCCTACCCCCTCTACTTGGGAAAGGCAACTTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGGCTCCACAGGCTGCTGGTAAAGGGAGTTCTCCATTTTGCTCAGAGCTCGGTCCAAAGCGTCTCTaGGACAGACGTCCTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: CWAPQAAGKGSSPFCSELGPKRL*DRRPLC Trigger: ACAGAGAGGACGTCTGTCCCAGAGACGCTTTGGACC...GAGCTCTGAGCAAAATGGAGAACTCCCTTTACCAGCAGCCTGTGGAGCCCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR CAA 90 bp | GCCCAGTTTCCCTCAGAGAAGTCACCATTTGGGAGAAAACTGCTCTaGACTGCAGCCCTGGTTCACAGGAAGGATGTCCTCTGCATGGAG | + |
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Preference number: 2 (lower is better) Translates to: AQFPSEKSPFGRKLL*TAALVHRKDVLCME Trigger: CTCCATGCAGAGGACATCCTTCCTGTGAACCAGGGCTGCAGTCAAGAGCAGTTTTCTCCCAAATGGTGACTTCTCTGAGGGAAACTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR-3UTR GCA 90 bp | ACACACTCTCCTTTCCATCCTGCTGTGCCCACAGACCCAGCTAGTCAAGGTCCAAGGAAGGATGTCCTCTaGATGGAGACTCAGCACATC | + |
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Preference number: 2 (lower is better) Translates to: THSPFHPAVPTDPASQGPRKDVL*METQHI Trigger: GATGTGCTGAGTCTCCATGCAGAGGACATCCTTCCT...TGGACCTTGACTAGCTGGGTCTGTGGGCACAGCAGGATGGAAAGGAGAGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR-3UTR TCA 90 bp | AAGCGTCTCTGGGACAGACGTCCTCTCTGTCCATCAGCAGCAGAAATACTTGAGGGAGAAAACTGCTCTTaGCTGCAGCCCTGGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: KRLWDRRPLCPSAAEILEGENCS*LQPWFT Trigger: TGTGAACCAGGGCTGCAGTCAAGAGCAGTTTTCTCC...CTCAAGTATTTCTGCTGCTGATGGACAGAGAGGACGTCTGTCCCAGAGACGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR-3UTR TCA 90 bp | GACCTTTGGAAGAGCAGTCAGTGTTCTTACCTGCTGAGCCATCTCACCAGCCCTTGTATTGTCACAACTTaGCAGGCAAAGCCACTCCCC | + |
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Preference number: 2 (lower is better) Translates to: DLWKSSQCSYLLSHLTSPCIVTT*QAKPLP Trigger: GGGGAGTGGCTTTGCCTGTCAAGTTGTGACAATACA...AGGGCTGGTGAGATGGCTCAGCAGGTAAGAACACTGACTGCTCTTCCAAAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202394.4 |
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| 3UTR-3UTR CCA 90 bp | GGACTTTATTCAGGAAGGACAAGGGATATATATGAACCATGGAGAGTGGGAAGGGGAGCTACCCAAGAATaGGCATCCACCTGCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: GLYSGRTRDIYEPWRVGRGATQE*ASTCQL Trigger: GAGCTGGCAGGTGGATGCCCATTCTTGGGTAGCTCC...CCTTCCCACTCTCCATGGTTCATATATATCCCTTGTCCTTCCTGAATAAAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR-3UTR CCA 90 bp | AAGCGTCTCTGGGACAGACGTCCTCTCTGTCCATCAGCAGCAGAAATACTTGAGAGAGAAGTCACCATTTaGGAGAAAACTGCTCTTGAC | + |
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Preference number: 2 (lower is better) Translates to: KRLWDRRPLCPSAAEILEREVTI*EKTALD Trigger: GTCAAGAGCAGTTTTCTCCCAAATGGTGACTTCTCT...CTCAAGTATTTCTGCTGCTGATGGACAGAGAGGACGTCTGTCCCAGAGACGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR-3UTR GCA 90 bp | GGACTTTATTCAGGAAGGACAAGGGATATATATGAACCATGGAGAGTGGGAAGGAAAACTGCTCTTGACTaGAGCCCTGGTTCACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: GLYSGRTRDIYEPWRVGRKTALD*SPGSQE Trigger: TTCCTGTGAACCAGGGCTGCAGTCAAGAGCAGTTTT...CCTTCCCACTCTCCATGGTTCATATATATCCCTTGTCCTTCCTGAATAAAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR-3UTR GCA 90 bp | GGACTTTATTCAGGAAGGACAAGGGATATATATGAACCATGGAGAGTGGGAAGGGTGAGAATACATCCTTaGATAAATATCGGGAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GLYSGRTRDIYEPWRVGRVRIHP*INIGRS Trigger: GCTCCTCCCGATATTTATGCAAGGATGTATTCTCAC...CCTTCCCACTCTCCATGGTTCATATATATCCCTTGTCCTTCCTGAATAAAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR TCA 72 bp | GAAGCCGGAGAAGGCGCGTTAGGAGGACTGGGTGGCTaGGTCACCTGCCCTGGGGTTCAGTCACAGGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: EAGEGALGGLGG*VTCPGVQSQAD Trigger: GTCAGCCTGTGACTGAACCCCAGGGCAGGTGACTCAGCCACCCAGTCCTCCTAACGCGCCTTCTCCGGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR CCA 72 bp | GCAAGAAGCCGGAGAAGGCGCGTTAGGAGGACTGGGTaGCTGAGTCACCTGCCCTGGGGTTCAGTCACAGGC | + |
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Preference number: 3 (lower is better) Translates to: ARSRRRRVRRTG*LSHLPWGSVTG Trigger: GCCTGTGACTGAACCCCAGGGCAGGTGACTCAGCCACCCAGTCCTCCTAACGCGCCTTCTCCGGCTTCTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR GCA 72 bp | CTACCTCGTGTGAGCACAGATCACATCCGACCTGGCTaGCCAGGGCACTGTGCTGCCCTCTGTACACACACA | + |
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Preference number: 3 (lower is better) Translates to: LPRVSTDHIRPG*PGHCAALCTHT Trigger: TGTGTGTGTACAGAGGGCAGCACAGTGCCCTGGGCAGCCAGGTCGGATGTGATCTGTGCTCACACGAGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR-3UTR CAA 90 bp | AGAGGAAGTTGCCTTTCCCAAGTAGAGGGGGTAGGGGTGTTGGGCTCCACAGGCGGGAGAAAACTGCTCTaGACTGCAGCCCTGGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: RGSCLSQVEGVGVLGSTGGRKLL*TAALVH Trigger: GTGAACCAGGGCTGCAGTCAAGAGCAGTTTTCTCCC...GCCTGTGGAGCCCAACACCCCTACCCCCTCTACTTGGGAAAGGCAACTTCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR CCA 72 bp | CTGCAGCCCTGGTTCACAGGAAGGATGTCCTCTGCATaGAGACTCAGCACATCAGAGCTGTACAGCAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: LQPWFTGRMSSA*RLSTSELYSRW Trigger: CCACCTGCTGTACAGCTCTGATGTGCTGAGTCTCCATGCAGAGGACATCCTTCCTGTGAACCAGGGCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR CCA 72 bp | CCCACAGACCCAGCTAGTCAAGGTCCAAAGCGTCTCTaGGACAGACGTCCTCTCTGTCCATCAGCAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: PTDPASQGPKRL*DRRPLCPSAAE Trigger: TTCTGCTGCTGATGGACAGAGAGGACGTCTGTCCCAGAGACGCTTTGGACCTTGACTAGCTGGGTCTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR TCA 72 bp | GAGTCACCTGCCCTGGGGTTCAGTCACAGGCTGACCTaGAACAGTTCTGCAAAGAGCAAAGCAGTCACCTGG | + |
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Preference number: 3 (lower is better) Translates to: ESPALGFSHRLT*NSSAKSKAVTW Trigger: CCAGGTGACTGCTTTGCTCTTTGCAGAACTGTTTCAGGTCAGCCTGTGACTGAACCCCAGGGCAGGTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR TCA 72 bp | ATCCTAACAGTATTCTTGAAAATGGGCTACCTCGTGTaGGCACAGATCACATCCGACCTGGCTGCCCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: ILTVFLKMGYLV*AQITSDLAAQG Trigger: GCCCTGGGCAGCCAGGTCGGATGTGATCTGTGCTCACACGAGGTAGCCCATTTTCAAGAATACTGTTAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR-3UTR CAA 90 bp | AGAGGAAGTTGCCTTTCCCAAGTAGAGGGGGTAGGGGTGTTGGGCTCCACAGGCTATAAGGACATGATTTaGGCCATGGTTAGGTGGATA | + |
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Preference number: 3 (lower is better) Translates to: RGSCLSQVEGVGVLGSTGYKDMI*AMVRWI Trigger: TATCCACCTAACCATGGCCAAAATCATGTCCTTATA...GCCTGTGGAGCCCAACACCCCTACCCCCTCTACTTGGGAAAGGCAACTTCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR CCA 72 bp | CTCTTTACGGATGGTTTTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LFTDGFEPPCGC*DLNSGPLEEQS Trigger: TGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCAAAACCATCCGTAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202394.4 |
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| 3UTR-3UTR CAA 90 bp | AACAGTTCTGCAAAGAGCAAAGCAGTCACCTGGAAGGCTTATGAGCCAGCCTGCATCCTAACAGTATTCTaGAAAATGGGCTACCTCGTG | + |
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Preference number: 3 (lower is better) Translates to: NSSAKSKAVTWKAYEPACILTVF*KMGYLV Trigger: CACGAGGTAGCCCATTTTCAAGAATACTGTTAGGAT...GCAGGCTGGCTCATAAGCCTTCCAGGTGACTGCTTTGCTCTTTGCAGAACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR TCA 72 bp | CATCACCTGATCAAATCTGGTAGCAAAGAGGTTGAGTaGGGTCACTATACCTCCGTTTGGCCCAAGTCCATA | + |
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Preference number: 3 (lower is better) Translates to: HHLIKSGSKEVE*GHYTSVWPKSI Trigger: TATGGACTTGGGCCAAACGGAGGTATAGTGACCTCACTCAACCTCTTTGCTACCAGATTTGATCAGGTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| 3UTR-3UTR CAA 90 bp | CTGCTGAGCCATCTCACCAGCCCTCATCTTATCCTCTTAATACGATTACCTAAATTGTATTGTCACAACTaGACAGGCAAAGCCACTCCC | + |
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Preference number: 3 (lower is better) Translates to: LLSHLTSPHLILLIRLPKLYCHN*TGKATP Trigger: GGGAGTGGCTTTGCCTGTCAAGTTGTGACAATACAA...TTTAGGTAATCGTATTAAGAGGATAAGATGAGGGCTGGTGAGATGGCTCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202394.4 |
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| 3UTR TCA 72 bp | ACTGTGAATGCCTCATTTGTATGGAGAAGTAGTCCATaGATGCCAGGTACTTTTGGGCGGGTTCTTATCCAG | + |
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Preference number: 3 (lower is better) Translates to: TVNASFVWRSSP*MPGTFGRVLIQ Trigger: CTGGATAAGAACCCGCCCAAAAGTACCTGGCATTCATGGACTACTTCTCCATACAAATGAGGCATTCACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR GCA 72 bp | GAGGTCACTATACCTCCGTTTGGCCCAAGTCCATATTaGTTCATGACTTCTTTATATTTCACTGTGTCTCGG | + |
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Preference number: 3 (lower is better) Translates to: EVTIPPFGPSPY*FMTSLYFTVSR Trigger: CCGAGACACAGTGAAATATAAAGAAGTCATGAAGCAATATGGACTTGGGCCAAACGGAGGTATAGTGACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| 3UTR CCA 72 bp | AGAACCAGGGCAAATCCTAGCTCTGAATGGACGGAATaGACCAAATCCTGGTCACAAACAATGCTTTGTATT | + |
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Preference number: 3 (lower is better) Translates to: RTRANPSSEWTE*TKSWSQTMLCI Trigger: AATACAAAGCATTGTTTGTGACCAGGATTTGGTCCATTCCGTCCATTCAGAGCTAGGATTTGCCCTGGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR TCA 72 bp | CAGACGTCCTCTCTGTCCATCAGCAGCAGAAATACTTaGGTTCAAACGATGATACTTGAAGTTATAGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: QTSSLSISSRNT*VQTMILEVIGS Trigger: TGAGCCTATAACTTCAAGTATCATCGTTTGAACTCAAGTATTTCTGCTGCTGATGGACAGAGAGGACGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR TCA 72 bp | AAAGGACGTGAGTTTTCTACTTGTATTGTCACAACTTaGCAGGCAAAGCCACTCCCCCAAAGCAATGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: KGREFSTCIVTT*QAKPLPQSNER Trigger: TCTTTCATTGCTTTGGGGGAGTGGCTTTGCCTGTCAAGTTGTGACAATACAAGTAGAAAACTCACGTCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000202394.4 |
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| 3UTR CCA 72 bp | CAGGAAGGACAAGGGATATATATGAACCATGGAGAGTaGGAAGGAGTTTCCAGGGTGATTGTAAAATCATTG | + |
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Preference number: 3 (lower is better) Translates to: QEGQGIYMNHGE*EGVSRVIVKSL Trigger: CAATGATTTTACAATCACCCTGGAAACTCCTTCCCACTCTCCATGGTTCATATATATCCCTTGTCCTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR-3UTR CAA 90 bp | GGACTTTATTCAGGAAGGACAAGGGATATATATGAACCATGGAGAGTGGGAAGGCAGCAGCAGAAATACTaGAGTTCAAACGATGATACT | + |
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Preference number: 3 (lower is better) Translates to: GLYSGRTRDIYEPWRVGRQQQKY*SSNDDT Trigger: AGTATCATCGTTTGAACTCAAGTATTTCTGCTGCTG...CCTTCCCACTCTCCATGGTTCATATATATCCCTTGTCCTTCCTGAATAAAGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR TCA 72 bp | CTATACCTCCGTTTGGCCCAAGTCCATATTGCTTCATaGCTTCTTTATATTTCACTGTGTCTCGGATATAGG | + |
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Preference number: 3 (lower is better) Translates to: LYLRLAQVHIAS*LLYISLCLGYR Trigger: CCTATATCCGAGACACAGTGAAATATAAAGAAGTCATGAAGCAATATGGACTTGGGCCAAACGGAGGTATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| 3UTR CCA 72 bp | CTTTATTCAGGAAGGACAAGGGATATATATGAACCATaGAGAGTGGGAAGGAGTTTCCAGGGTGATTGTAAA | + |
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Preference number: 3 (lower is better) Translates to: LYSGRTRDIYEP*RVGRSFQGDCK Trigger: TTTACAATCACCCTGGAAACTCCTTCCCACTCTCCATGGTTCATATATATCCCTTGTCCTTCCTGAATAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| 3UTR CCA 72 bp | AATCCTAGCTCTGAATGGACGGAATGGACCAAATCCTaGTCACAAACAATGCTTTGTATTGTTCTAAGTACA | + |
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Preference number: 3 (lower is better) Translates to: NPSSEWTEWTKS*SQTMLCIVLST Trigger: TGTACTTAGAACAATACAAAGCATTGTTTGTGACCAGGATTTGGTCCATTCCGTCCATTCAGAGCTAGGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CCA 90 bp | GCTACCCAAGAATGGGCATCCACCTGCCAGCTCCGCCTTCAACCAGACTTCATCGGAGCCCGGGAAGCCTaGGGTTCGGATGGAGCCACG | + |
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Preference number: 4 (lower is better) Translates to: ATQEWASTCQLRLQPDFIGAREA*GSDGAT Trigger: CGTGGCTCCATCCGAACCCCAGGCTTCCCGGGCTCC...GATGAAGTCTGGTTGAAGGCGGAGCTGGCAGGTGGATGCCCATTCTTGGGTAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CCA 90 bp | GGTTTTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGGGAGCCCGGGAAGCCTaGGGTTCGGATGGAGCCACG | + |
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Preference number: 4 (lower is better) Translates to: GFEPPCGCWDLNSGPLEEGAREA*GSDGAT Trigger: CGTGGCTCCATCCGAACCCCAGGCTTCCCGGGCTCC...CTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCAAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202394.4 |
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| CDS-3UTR TCA 90 bp | CTGCTCTTGACTGCAGCCCTGGTTCACAGGAAGGATGTCCTCTGCATGGAGACTCAGCTGGGTCCAGGTTaGTTACATACGGTGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: LLLTAALVHRKDVLCMETQLGPG*LHTVDS Trigger: GCTGTCCACCGTATGTAATCAACCTGGACCCAGCTG...AGTCTCCATGCAGAGGACATCCTTCCTGTGAACCAGGGCTGCAGTCAAGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR GCA 90 bp | CATCCTGCTGTGCCCACAGACCCAGCTAGTCAAGGTCCAAAGCGTCTCTGGGACAAAGCCTCAAAATCCTaGATCCACTCCACGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: HPAVPTDPASQGPKRLWDKASKS*IHSTAK Trigger: CTTTGCCGTGGAGTGGATGCAGGATTTTGAGGCTTT...GTCCCAGAGACGCTTTGGACCTTGACTAGCTGGGTCTGTGGGCACAGCAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CCA 90 bp | CATCCTGCTGTGCCCACAGACCCAGCTAGTCAAGGTCCAAAGCGTCTCTGGGACTGGTTCAAGGCATCCTaGAAAGCCTCAAAATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: HPAVPTDPASQGPKRLWDWFKAS*KASKSC Trigger: GCAGGATTTTGAGGCTTTCCAGGATGCCTTGAACCA...GTCCCAGAGACGCTTTGGACCTTGACTAGCTGGGTCTGTGGGCACAGCAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CCA 90 bp | CATCCTGCTGTGCCCACAGACCCAGCTAGTCAAGGTCCAAAGCGTCTCTGGGACCTCGGATATCAATATTaGCGGGAAAGGGGACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HPAVPTDPASQGPKRLWDLGYQY*RERGLH Trigger: ATGAAGTCCCCTTTCCCGCCAATATTGATATCCGAG...GTCCCAGAGACGCTTTGGACCTTGACTAGCTGGGTCTGTGGGCACAGCAGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR TCA 90 bp | GGTTTTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGCTGGGTCCAGGTTaGTTACATACGGTGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFEPPCGCWDLNSGPLEEQLGPG*LHTVDS Trigger: GCTGTCCACCGTATGTAATCAACCTGGACCCAGCTG...CTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCAAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202394.4 |
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| CDS-3UTR TCA 90 bp | AACAGTTCTGCAAAGAGCAAAGCAGTCACCTGGAAGGCTTATGAGCCAGCCTGCGACTACTGTTGGAAATaGGGAAGCCAGGGCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSSAKSKAVTWKAYEPACDYCWK*GSQGLS Trigger: ACTGAGGCCCTGGCTTCCTCATTTCCAACAGTAGTC...GCAGGCTGGCTCATAAGCCTTCCAGGTGACTGCTTTGCTCTTTGCAGAACTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
||
| CDS-3UTR TCA 90 bp | AACAGTTCTGCAAAGAGCAAAGCAGTCACCTGGAAGGCTTATGAGCCAGCCTGCCCTCTGCAGCACTGGTaGCCTGAGTACAGAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSSAKSKAVTWKAYEPACPLQHW*PEYRVH Trigger: ATGAACTCTGTACTCAGGTCACCAGTGCTGCAGAGG...GCAGGCTGGCTCATAAGCCTTCCAGGTGACTGCTTTGCTCTTTGCAGAACTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR TCA 90 bp | TGTTGGGCTCCACAGGCTGCTGGTAAAGGGAGTTCTCCATTTTGCTCAGAGCTCCCATTGACTCCTCCATaGAGTTCTGAAATGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CWAPQAAGKGSSPFCSELPLTPP*SSEMLA Trigger: AGCCAGCATTTCAGAACTTCATGGAGGAGTCAATGG...GAGCTCTGAGCAAAATGGAGAACTCCCTTTACCAGCAGCCTGTGGAGCCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR GCA 90 bp | GTAGCAAAGAGGTTGAGTGAGGTCACTATACCTCCGTTTGGCCCAAGTCCATATTTCCAGGGGTCCTGGTaGCCTCTTCTGGCCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: VAKRLSEVTIPPFGPSPYFQGSW*PLLASI Trigger: TATTGAGGCCAGAAGAGGGCACCAGGACCCCTGGAA...ATATGGACTTGGGCCAAACGGAGGTATAGTGACCTCACTCAACCTCTTTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| CDS-3UTR CCA 90 bp | ATACCTCCGTTTGGCCCAAGTCCATATTGCTTCATGACTTCTTTATATTTCACTGGAGCCCGGGAAGCCTaGGGTTCGGATGGAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: IPPFGPSPYCFMTSLYFTGAREA*GSDGAT Trigger: CGTGGCTCCATCCGAACCCCAGGCTTCCCGGGCTCC...AGTGAAATATAAAGAAGTCATGAAGCAATATGGACTTGGGCCAAACGGAGGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| CDS-3UTR CCA 90 bp | TCAAATCTGGTAGCAAAGAGGTTGAGTGAGGTCACTATACCTCCGTTTGGCCCACCTGGTGCCCTCTTCTaGCCTCAATATTGGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNLVAKRLSEVTIPPFGPPGALF*PQYWRE Trigger: TTCCCGCCAATATTGAGGCCAGAAGAGGGCACCAGG...TGGGCCAAACGGAGGTATAGTGACCTCACTCAACCTCTTTGCTACCAGATTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| 3UTR CAA 72 bp | CCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTaGGAAGAGCAGTCAGTGTTCTTACCTGCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPCGCWDLNSGP*EEQSVFLPAEP Trigger: TGGCTCAGCAGGTAAGAACACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202394.4 |
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| CDS-3UTR GCA 90 bp | AGAGGAAGTTGCCTTTCCCAAGTAGAGGGGGTAGGGGTGTTGGGCTCCACAGGCTGGTTTTGTACAAGATaGTGCATGCGTAAAGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: RGSCLSQVEGVGVLGSTGWFCTR*CMRKAY Trigger: ATATGCTTTACGCATGCAGCATCTTGTACAAAACCA...GCCTGTGGAGCCCAACACCCCTACCCCCTCTACTTGGGAAAGGCAACTTCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CCA 90 bp | AACAGTTCTGCAAAGAGCAAAGCAGTCACCTGGAAGGCTTATGAGCCAGCCTGCGAAGTTCTGAAATGCTaGCTCTTCACGGCTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSSAKSKAVTWKAYEPACEVLKC*LFTAFL Trigger: GAGGAAAGCCGTGAAGAGCCAGCATTTCAGAACTTC...GCAGGCTGGCTCATAAGCCTTCCAGGTGACTGCTTTGCTCTTTGCAGAACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
||
| CDS-3UTR GCA 90 bp | ACACACTCTCCTTTCCATCCTGCTGTGCCCACAGACCCAGCTAGTCAAGGTCCAGTACAAGATGCTGCATaGGTAAAGCATATTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: THSPFHPAVPTDPASQGPVQDAA*VKHIGH Trigger: ATGTCCAATATGCTTTACGCATGCAGCATCTTGTAC...TGGACCTTGACTAGCTGGGTCTGTGGGCACAGCAGGATGGAAAGGAGAGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
||
| CDS-3UTR CCA 90 bp | AAGCGTCTCTGGGACAGACGTCCTCTCTGTCCATCAGCAGCAGAAATACTTGAGGACTTCATGCACAGCTaGGTCCAGGTTGATTACATA | + |
|
Preference number: 4 (lower is better) Translates to: KRLWDRRPLCPSAAEILEDFMHS*VQVDYI Trigger: TATGTAATCAACCTGGACCCAGCTGTGCATGAAGTC...CTCAAGTATTTCTGCTGCTGATGGACAGAGAGGACGTCTGTCCCAGAGACGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
||
| CDS-3UTR CCA 90 bp | CATCCTGCTGTGCCCACAGACCCAGCTAGTCAAGGTCCAAAGCGTCTCTGGGACTATCTGAATGTGTTCTaGGCCTTCTCAATAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: HPAVPTDPASQGPKRLWDYLNVF*AFSINF Trigger: GAAATTTATTGAGAAGGCCCAGAACACATTCAGATA...GTCCCAGAGACGCTTTGGACCTTGACTAGCTGGGTCTGTGGGCACAGCAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR GCA 90 bp | ACACACTCTCCTTTCCATCCTGCTGTGCCCACAGACCCAGCTAGTCAAGGTCCATTTTGTACAAGATGCTaGATGCGTAAAGCATATTGG | + |
|
Preference number: 4 (lower is better) Translates to: THSPFHPAVPTDPASQGPFCTRC*MRKAYW Trigger: CCAATATGCTTTACGCATGCAGCATCTTGTACAAAA...TGGACCTTGACTAGCTGGGTCTGTGGGCACAGCAGGATGGAAAGGAGAGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR TCA 90 bp | GGACTTTATTCAGGAAGGACAAGGGATATATATGAACCATGGAGAGTGGGAAGGTCCTCCATGAAGTTCTaGAATGCTGGCTCTTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GLYSGRTRDIYEPWRVGRSSMKF*NAGSSR Trigger: CCGTGAAGAGCCAGCATTTCAGAACTTCATGGAGGA...CCTTCCCACTCTCCATGGTTCATATATATCCCTTGTCCTTCCTGAATAAAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
||
| CDS-3UTR GCA 90 bp | TGTTGGGCTCCACAGGCTGCTGGTAAAGGGAGTTCTCCATTTTGCTCAGAGCTCGGCCCAAGTCCATATTaGTTCATGACTTCTTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: CWAPQAAGKGSSPFCSELGPSPY*FMTSLY Trigger: ATATAAAGAAGTCATGAAGCAATATGGACTTGGGCC...GAGCTCTGAGCAAAATGGAGAACTCCCTTTACCAGCAGCCTGTGGAGCCCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CCA 90 bp | GTAGCAAAGAGGTTGAGTGAGGTCACTATACCTCCGTTTGGCCCAAGTCCATATGACTTCATGCACAGCTaGGTCCAGGTTGATTACATA | + |
|
Preference number: 4 (lower is better) Translates to: VAKRLSEVTIPPFGPSPYDFMHS*VQVDYI Trigger: TATGTAATCAACCTGGACCCAGCTGTGCATGAAGTC...ATATGGACTTGGGCCAAACGGAGGTATAGTGACCTCACTCAACCTCTTTGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| CDS-3UTR TCA 90 bp | ATACCTCCGTTTGGCCCAAGTCCATATTGCTTCATGACTTCTTTATATTTCACTCAGCTGGGTCCAGGTTaGTTACATACGGTGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPPFGPSPYCFMTSLYFTQLGPG*LHTVDS Trigger: GCTGTCCACCGTATGTAATCAACCTGGACCCAGCTG...AGTGAAATATAAAGAAGTCATGAAGCAATATGGACTTGGGCCAAACGGAGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| 3UTR CAA 72 bp | GAAACAGCTGGTGCACACACCTTTATTGGGGTGGGCTaGTGGACTTTATTCAGGAAGGACAAGGGATATATA | + |
|
Preference number: 4 (lower is better) Translates to: ETAGAHTFIGVG*WTLFRKDKGYI Trigger: TATATATCCCTTGTCCTTCCTGAATAAAGTCCACAAGCCCACCCCAATAAAGGTGTGTGCACCAGCTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CCA 90 bp | CTGCTGAGCCATCTCACCAGCCCTCATCTTATCCTCTTAATACGATTACCTAAACTCGGATATCAATATTaGCGGGAAAGGGGACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSHLTSPHLILLIRLPKLGYQY*RERGLH Trigger: ATGAAGTCCCCTTTCCCGCCAATATTGATATCCGAG...TTTAGGTAATCGTATTAAGAGGATAAGATGAGGGCTGGTGAGATGGCTCAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202394.4 |
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| CDS GCA 90 bp | GGTTCCTCGAGTCAGGATCAAGTCAGAAGGATCCAGCACAGGAGATaGGTTGCCTTTGCCGGCCTCTGGATCCAGGGCTACGGAGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSSSQDQVRRIQHRR*VAFAGLWIQGYGAH Trigger: ATGGGCTCCGTAGCCCTGGATCCAGAGGCCGGCAAAGGCAACGCATCTCCTGTGCTGGATCCTTCTGACTTGATCCTGACTCGAGGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS GCA 90 bp | CTCGAGTCAGGATCAAGTCAGAAGGATCCAGCACAGGAGATGCGTTaGCTTTGCCGGCCTCTGGATCCAGGGCTACGGAGCCCATATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LESGSSQKDPAQEMR*LCRPLDPGLRSPYP Trigger: AGGATATGGGCTCCGTAGCCCTGGATCCAGAGGCCGGCAAAGGCAACGCATCTCCTGTGCTGGATCCTTCTGACTTGATCCTGACTCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CAA 90 bp | GCTACCCAAGAATGGGCATCCACCTGCCAGCTCCGCCTTCAACCAGACTTCATCGGTGGACAGCCTTTGTaGTGCAGGTGTCCTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATQEWASTCQLRLQPDFIGGQPL*CRCPVS Trigger: GCTCACAGGACACCTGCACAACAAAGGCTGTCCACC...GATGAAGTCTGGTTGAAGGCGGAGCTGGCAGGTGGATGCCCATTCTTGGGTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS GCA 90 bp | TCAGGATCAAGTCAGAAGGATCCAGCACAGGAGATGCGTTGCCTTTaGCGGCCTCTGGATCCAGGGCTACGGAGCCCATATCCTTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGSSQKDPAQEMRCL*RPLDPGLRSPYPSE Trigger: TTCGGAAGGATATGGGCTCCGTAGCCCTGGATCCAGAGGCCGGCAAAGGCAACGCATCTCCTGTGCTGGATCCTTCTGACTTGATCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CAA 90 bp | CATCCTGCTGTGCCCACAGACCCAGCTAGTCAAGGTCCAAAGCGTCTCTGGGACACAGCTGGGTCCAGGTaGATTACATACGGTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: HPAVPTDPASQGPKRLWDTAGSR*ITYGGQ Trigger: CTGTCCACCGTATGTAATCAACCTGGACCCAGCTGT...GTCCCAGAGACGCTTTGGACCTTGACTAGCTGGGTCTGTGGGCACAGCAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CAA 90 bp | GCTACCCAAGAATGGGCATCCACCTGCCAGCTCCGCCTTCAACCAGACTTCATCCCGAAGACGCTCCAGTaGCTCCTTCTGCTGATTACT | + |
|
Preference number: 5 (lower is better) Translates to: ATQEWASTCQLRLQPDFIPKTLQ*LLLLIT Trigger: AGTAATCAGCAGAAGGAGCAACTGGAGCGTCTTCGG...GATGAAGTCTGGTTGAAGGCGGAGCTGGCAGGTGGATGCCCATTCTTGGGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS TCA 90 bp | TCAGGACGATATTCCCTTTCGTACTCCTCTGCAGCACTGGTGACCTaGGTACAGAGTTCATCGAAGCCGGTGCCCACCACAGCAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: SGRYSLSYSSAALVT*VQSSSKPVPTTADT Trigger: TGTGTCTGCTGTGGTGGGCACCGGCTTCGATGAACTCTGTACTCAGGTCACCAGTGCTGCAGAGGAGTACGAAAGGGAATATCGTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS TCA 90 bp | CGTATTCAGGACGATATTCCCTTTCGTACTCCTCTGCAGCACTGGTaGCCTGAGTACAGAGTTCATCGAAGCCGGTGCCCACCACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RIQDDIPFRTPLQHW*PEYRVHRSRCPPQQ Trigger: CTGCTGTGGTGGGCACCGGCTTCGATGAACTCTGTACTCAGGTCACCAGTGCTGCAGAGGAGTACGAAAGGGAATATCGTCCTGAATACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS GCA 90 bp | TGGTGCCCTCTTCTGGCCTCAATATTGGCGGGAAAGGGGACTTCATaGACAGCTGGGTCCAGGTTGATTACATACGGTGGACAGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WCPLLASILAGKGTS*TAGSRLITYGGQPL Trigger: CAAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGAAGTCCCCTTTCCCGCCAATATTGAGGCCAGAAGAGGGCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| CDS-3UTR CAA 90 bp | AGAGGAAGTTGCCTTTCCCAAGTAGAGGGGGTAGGGGTGTTGGGCTCCACAGGCCTGGTAGCAAAGAGGTaGAGTGAGGTCACTATACCT | + |
|
Preference number: 5 (lower is better) Translates to: RGSCLSQVEGVGVLGSTGLVAKR*SEVTIP Trigger: AGGTATAGTGACCTCACTCAACCTCTTTGCTACCAG...GCCTGTGGAGCCCAACACCCCTACCCCCTCTACTTGGGAAAGGCAACTTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CAA 90 bp | CATCCTGCTGTGCCCACAGACCCAGCTAGTCAAGGTCCAAAGCGTCTCTGGGACAAAGGCAGCTTGGTTTaGTACAAGATGCTGCATGCG | + |
|
Preference number: 5 (lower is better) Translates to: HPAVPTDPASQGPKRLWDKGSLV*YKMLHA Trigger: CGCATGCAGCATCTTGTACAAAACCAAGCTGCCTTT...GTCCCAGAGACGCTTTGGACCTTGACTAGCTGGGTCTGTGGGCACAGCAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS GCA 90 bp | CTTCAGACGCTCGTATTCAGGACGATATTCCCTTTCGTACTCCTCTaGAGCACTGGTGACCTGAGTACAGAGTTCATCGAAGCCGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQTLVFRTIFPFVLL*STGDLSTEFIEAGA Trigger: GGCACCGGCTTCGATGAACTCTGTACTCAGGTCACCAGTGCTGCAGAGGAGTACGAAAGGGAATATCGTCCTGAATACGAGCGTCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS CCA 90 bp | TCTTCTGGCCTCAATATTGGCGGGAAAGGGGACTTCATGCACAGCTaGGTCCAGGTTGATTACATACGGTGGACAGCCTTTGTTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSGLNIGGKGDFMHS*VQVDYIRWTAFVVQ Trigger: CTGCACAACAAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGAAGTCCCCTTTCCCGCCAATATTGAGGCCAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| CDS-3UTR CAA 90 bp | GTAGCAAAGAGGTTGAGTGAGGTCACTATACCTCCGTTTGGCCCAAGTCCATATGGTGGACAGCCTTTGTaGTGCAGGTGTCCTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VAKRLSEVTIPPFGPSPYGGQPL*CRCPVS Trigger: GCTCACAGGACACCTGCACAACAAAGGCTGTCCACC...ATATGGACTTGGGCCAAACGGAGGTATAGTGACCTCACTCAACCTCTTTGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| CDS-3UTR CAA 90 bp | GATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGTTCTTACCTGCTGAGCCAGGTGGACAGCCTTTGTaGTGCAGGTGTCCTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DLNSGPLEEQSVFLPAEPGGQPL*CRCPVS Trigger: GCTCACAGGACACCTGCACAACAAAGGCTGTCCACC...TGGCTCAGCAGGTAAGAACACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202394.4 |
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| CDS TCA 90 bp | ACGGAGCCCATATCCTTCCGAAGACGCTCCAGTTGCTCCTTCTGCTaGTTACTCTGGGCATTTGCCAGTGATTTCTTCAGACGCTCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TEPISFRRRSSCSFC*LLWAFASDFFRRSY Trigger: ATACGAGCGTCTGAAGAAATCACTGGCAAATGCCCAGAGTAATCAGCAGAAGGAGCAACTGGAGCGTCTTCGGAAGGATATGGGCTCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS GCA 90 bp | ACAGCTGGGTCCAGGTTGATTACATACGGTGGACAGCCTTTGTTGTaGAGGTGTCCTGTGAGCCTCTGTACAAAGGTAGTTTTCCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TAGSRLITYGGQPLL*RCPVSLCTKVVFPD Trigger: ATCCGGGAAAACTACCTTTGTACAGAGGCTCACAGGACACCTGCACAACAAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076949.13 ENSMUST00000201053.4 ENSMUST00000202394.4 |
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| CDS CCA 90 bp | AAAGGGGACTTCATGCACAGCTGGGTCCAGGTTGATTACATACGGTaGACAGCCTTTGTTGTGCAGGTGTCCTGTGAGCCTCTGTACAAA | + |
|
Preference number: 5 (lower is better) Translates to: KGDFMHSWVQVDYIR*TAFVVQVSCEPLYK Trigger: TTTGTACAGAGGCTCACAGGACACCTGCACAACAAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGAAGTCCCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076949.13 ENSMUST00000201053.4 ENSMUST00000202394.4 |
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| CDS CCA 90 bp | GTCTCGGATATCAATATTGGCGGGAAAGGGGACTTCATGCACAGCTaGGTCCAGGTTGATTACATACGGTGGACAGCCTTTGTTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSDINIGGKGDFMHS*VQVDYIRWTAFVVQ Trigger: CTGCACAACAAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGAAGTCCCCTTTCCCGCCAATATTGATATCCGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076949.13 ENSMUST00000202394.4 |
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| CDS-3UTR CAA 90 bp | AGGTTGAGTGAGGTCACTATACCTCCGTTTGGCCCAAGTCCATATTGCTTCATGTACGGTGGACAGCCTTaGTTGTGCAGGTGTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLSEVTIPPFGPSPYCFMYGGQP*LCRCPV Trigger: CACAGGACACCTGCACAACAAAGGCTGTCCACCGTA...CATGAAGCAATATGGACTTGGGCCAAACGGAGGTATAGTGACCTCACTCAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
||
| CDS-3UTR CAA 90 bp | GGTTTTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGACAGCTGGGTCCAGGTaGATTACATACGGTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: GFEPPCGCWDLNSGPLEETAGSR*ITYGGQ Trigger: CTGTCCACCGTATGTAATCAACCTGGACCCAGCTGT...CTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCAAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202394.4 |
||
| CDS-3UTR CAA 90 bp | AACAGTTCTGCAAAGAGCAAAGCAGTCACCTGGAAGGCTTATGAGCCAGCCTGCGACGTAGGTAGTCTCTaGGTTCAAGGCATCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NSSAKSKAVTWKAYEPACDVGSL*VQGILE Trigger: TTCCAGGATGCCTTGAACCAAGAGACTACCTACGTC...GCAGGCTGGCTCATAAGCCTTCCAGGTGACTGCTTTGCTCTTTGCAGAACTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
||
| CDS GCA 90 bp | TTCACTGTGTCTCGGATATCAATATTGGCGGGAAAGGGGACTTCATaGACAGCTGGGTCCAGGTTGATTACATACGGTGGACAGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FTVSRISILAGKGTS*TAGSRLITYGGQPL Trigger: CAAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGAAGTCCCCTTTCCCGCCAATATTGATATCCGAGACACAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076949.13 ENSMUST00000202394.4 |
||
| CDS-3UTR CAA 90 bp | AGGTTGAGTGAGGTCACTATACCTCCGTTTGGCCCAAGTCCATATTGCTTCATGACAGCTGGGTCCAGGTaGATTACATACGGTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: RLSEVTIPPFGPSPYCFMTAGSR*ITYGGQ Trigger: CTGTCCACCGTATGTAATCAACCTGGACCCAGCTGT...CATGAAGCAATATGGACTTGGGCCAAACGGAGGTATAGTGACCTCACTCAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
||
| CDS-3UTR CAA 90 bp | ACACACTCTCCTTTCCATCCTGCTGTGCCCACAGACCCAGCTAGTCAAGGTCCAACAATGAAAGGCAGCTaGGTTTTGTACAAGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: THSPFHPAVPTDPASQGPTMKGS*VLYKML Trigger: CAGCATCTTGTACAAAACCAAGCTGCCTTTCATTGT...TGGACCTTGACTAGCTGGGTCTGTGGGCACAGCAGGATGGAAAGGAGAGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CAA 90 bp | TGTTGGGCTCCACAGGCTGCTGGTAAAGGGAGTTCTCCATTTTGCTCAGAGCTCGATTACTCTGGGCATTaGCCAGTGATTTCTTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: CWAPQAAGKGSSPFCSELDYSGH*PVISSD Trigger: GTCTGAAGAAATCACTGGCAAATGCCCAGAGTAATC...GAGCTCTGAGCAAAATGGAGAACTCCCTTTACCAGCAGCCTGTGGAGCCCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CAA 90 bp | GGACTTTATTCAGGAAGGACAAGGGATATATATGAACCATGGAGAGTGGGAAGGTACGGTGGACAGCCTTaGTTGTGCAGGTGTCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GLYSGRTRDIYEPWRVGRYGGQP*LCRCPV Trigger: CACAGGACACCTGCACAACAAAGGCTGTCCACCGTA...CCTTCCCACTCTCCATGGTTCATATATATCCCTTGTCCTTCCTGAATAAAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS TCA 90 bp | ACGCTCCAGTTGCTCCTTCTGCTGATTACTCTGGGCATTTGCCAGTaGTTTCTTCAGACGCTCGTATTCAGGACGATATTCCCTTTCGTA | + |
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Preference number: 5 (lower is better) Translates to: TLQLLLLLITLGICQ*FLQTLVFRTIFPFV Trigger: TACGAAAGGGAATATCGTCCTGAATACGAGCGTCTGAAGAAATCACTGGCAAATGCCCAGAGTAATCAGCAGAAGGAGCAACTGGAGCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS TCA 90 bp | TACTTGTTCCTCTTCCAGTGTGCCATTGACTCCTCCATGAAGTTCTaGAATGCTGGCTCTTCACGGCTTTCCTCTGTAACTCTGTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: YLFLFQCAIDSSMKF*NAGSSRLSSVTLWS Trigger: TGACCACAGAGTTACAGAGGAAAGCCGTGAAGAGCCAGCATTTCAGAACTTCATGGAGGAGTCAATGGCACACTGGAAGAGGAACAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CAA 90 bp | GGACTTTATTCAGGAAGGACAAGGGATATATATGAACCATGGAGAGTGGGAAGGTCACTATACCTCCGTTaGGCCCAAGTCCATATTGCT | + |
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Preference number: 5 (lower is better) Translates to: GLYSGRTRDIYEPWRVGRSLYLR*AQVHIA Trigger: AGCAATATGGACTTGGGCCAAACGGAGGTATAGTGA...CCTTCCCACTCTCCATGGTTCATATATATCCCTTGTCCTTCCTGAATAAAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS-3UTR CAA 90 bp | AACAGTTCTGCAAAGAGCAAAGCAGTCACCTGGAAGGCTTATGAGCCAGCCTGCTCAATGATGTCGGTTTaGTTCATGACCACAATGAAA | + |
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Preference number: 5 (lower is better) Translates to: NSSAKSKAVTWKAYEPACSMMSV*FMTTMK Trigger: TTTCATTGTGGTCATGAACAAAACCGACATCATTGA...GCAGGCTGGCTCATAAGCCTTCCAGGTGACTGCTTTGCTCTTTGCAGAACTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS TCA 90 bp | GTGAGGTCACTATACCTCCGTTTGGCCCAAGTCCATATTGCTTCATaGCTTCTTTATATTTCACTGTGTCTCGGATATCAATATTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: VRSLYLRLAQVHIAS*LLYISLCLGYQYWR Trigger: CCGCCAATATTGATATCCGAGACACAGTGAAATATAAAGAAGTCATGAAGCAATATGGACTTGGGCCAAACGGAGGTATAGTGACCTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS GCA 90 bp | AGGTTGAGTGAGGTCACTATACCTCCGTTTGGCCCAAGTCCATATTaGTTCATGACTTCTTTATATTTCACTGTGTCTCGGATATCAATA | + |
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Preference number: 5 (lower is better) Translates to: RLSEVTIPPFGPSPY*FMTSLYFTVSRISI Trigger: TATTGATATCCGAGACACAGTGAAATATAAAGAAGTCATGAAGCAATATGGACTTGGGCCAAACGGAGGTATAGTGACCTCACTCAACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS GCA 72 bp | GGATCAAGTCAGAAGGATCCAGCACAGGAGATGCGTTaGCTTTGCCGGCCTCTGGATCCAGGGCTACGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GSSQKDPAQEMR*LCRPLDPGLRS Trigger: GCTCCGTAGCCCTGGATCCAGAGGCCGGCAAAGGCAACGCATCTCCTGTGCTGGATCCTTCTGACTTGATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS CCA 72 bp | TCCAGGGGTCCTGGTGCCCTCTTCTGGCCTCAATATTaGCGGGAAAGGGGACTTCATGCACAGCTGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SRGPGALFWPQY*RERGLHAQLGP Trigger: TGGACCCAGCTGTGCATGAAGTCCCCTTTCCCGCCAATATTGAGGCCAGAAGAGGGCACCAGGACCCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| CDS CAA 72 bp | TTCCAGGGGTCCTGGTGCCCTCTTCTGGCCTCAATATaGGCGGGAAAGGGGACTTCATGCACAGCTGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: FQGSWCPLLASI*AGKGTSCTAGS Trigger: GGACCCAGCTGTGCATGAAGTCCCCTTTCCCGCCAATATTGAGGCCAGAAGAGGGCACCAGGACCCCTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| CDS CAA 90 bp | CCTCGAGTCAGGATCAAGTCAGAAGGATCCAGCACAGGAGATGCGTaGCCTTTGCCGGCCTCTGGATCCAGGGCTACGGAGCCCATATCC | + |
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Preference number: 6 (lower is better) Translates to: PRVRIKSEGSSTGDA*PLPASGSRATEPIS Trigger: GGATATGGGCTCCGTAGCCCTGGATCCAGAGGCCGGCAAAGGCAACGCATCTCCTGTGCTGGATCCTTCTGACTTGATCCTGACTCGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS CAA 90 bp | GTCAGGATCAAGTCAGAAGGATCCAGCACAGGAGATGCGTTGCCTTaGCCGGCCTCTGGATCCAGGGCTACGGAGCCCATATCCTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: VRIKSEGSSTGDALP*PASGSRATEPISFR Trigger: TCGGAAGGATATGGGCTCCGTAGCCCTGGATCCAGAGGCCGGCAAAGGCAACGCATCTCCTGTGCTGGATCCTTCTGACTTGATCCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS CAA 72 bp | AGGATCAAGTCAGAAGGATCCAGCACAGGAGATGCGTaGCCTTTGCCGGCCTCTGGATCCAGGGCTACGGAG | + |
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Preference number: 6 (lower is better) Translates to: RIKSEGSSTGDA*PLPASGSRATE Trigger: CTCCGTAGCCCTGGATCCAGAGGCCGGCAAAGGCAACGCATCTCCTGTGCTGGATCCTTCTGACTTGATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS GCA 72 bp | AGTCAGGATCAAGTCAGAAGGATCCAGCACAGGAGATaGGTTGCCTTTGCCGGCCTCTGGATCCAGGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: SQDQVRRIQHRR*VAFAGLWIQGY Trigger: GTAGCCCTGGATCCAGAGGCCGGCAAAGGCAACGCATCTCCTGTGCTGGATCCTTCTGACTTGATCCTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS CCA 72 bp | TGTAGATCCAGTTCCAGGGGTCCTGGTGCCCTCTTCTaGCCTCAATATTGGCGGGAAAGGGGACTTCATGCA | + |
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Preference number: 6 (lower is better) Translates to: CRSSSRGPGALF*PQYWRERGLHA Trigger: TGCATGAAGTCCCCTTTCCCGCCAATATTGAGGCCAGAAGAGGGCACCAGGACCCCTGGAACTGGATCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| CDS CAA 72 bp | GCGGGAAAGGGGACTTCATGCACAGCTGGGTCCAGGTaGATTACATACGGTGGACAGCCTTTGTTGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: AGKGTSCTAGSR*ITYGGQPLLCR Trigger: CCTGCACAACAAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGAAGTCCCCTTTCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076949.13 ENSMUST00000201053.4 ENSMUST00000202394.4 |
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| CDS CAA 72 bp | GGCTACGGAGCCCATATCCTTCCGAAGACGCTCCAGTaGCTCCTTCTGCTGATTACTCTGGGCATTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GYGAHILPKTLQ*LLLLITLGICQ Trigger: CTGGCAAATGCCCAGAGTAATCAGCAGAAGGAGCAACTGGAGCGTCTTCGGAAGGATATGGGCTCCGTAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS TCA 72 bp | CGGGAAAGGGGACTTCATGCACAGCTGGGTCCAGGTTaGTTACATACGGTGGACAGCCTTTGTTGTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RERGLHAQLGPG*LHTVDSLCCAG Trigger: ACCTGCACAACAAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGAAGTCCCCTTTCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076949.13 ENSMUST00000201053.4 ENSMUST00000202394.4 |
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| CDS TCA 72 bp | TATTCCCTTTCGTACTCCTCTGCAGCACTGGTGACCTaGGTACAGAGTTCATCGAAGCCGGTGCCCACCACA | + |
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Preference number: 6 (lower is better) Translates to: YSLSYSSAALVT*VQSSSKPVPTT Trigger: TGTGGTGGGCACCGGCTTCGATGAACTCTGTACTCAGGTCACCAGTGCTGCAGAGGAGTACGAAAGGGAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS TCA 72 bp | GACGATATTCCCTTTCGTACTCCTCTGCAGCACTGGTaGCCTGAGTACAGAGTTCATCGAAGCCGGTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: DDIPFRTPLQHW*PEYRVHRSRCP Trigger: TGGGCACCGGCTTCGATGAACTCTGTACTCAGGTCACCAGTGCTGCAGAGGAGTACGAAAGGGAATATCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS GCA 72 bp | CTTCTGGCCTCAATATTGGCGGGAAAGGGGACTTCATaGACAGCTGGGTCCAGGTTGATTACATACGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LLASILAGKGTS*TAGSRLITYGG Trigger: TCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGAAGTCCCCTTTCCCGCCAATATTGAGGCCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| CDS CCA 72 bp | TTCATGCACAGCTGGGTCCAGGTTGATTACATACGGTaGACAGCCTTTGTTGTGCAGGTGTCCTGTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: FMHSWVQVDYIR*TAFVVQVSCEP Trigger: AGGCTCACAGGACACCTGCACAACAAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076949.13 ENSMUST00000201053.4 ENSMUST00000202394.4 |
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| CDS CAA 72 bp | GCTGGGTCCAGGTTGATTACATACGGTGGACAGCCTTaGTTGTGCAGGTGTCCTGTGAGCCTCTGTACAAAG | + |
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Preference number: 6 (lower is better) Translates to: AGSRLITYGGQP*LCRCPVSLCTK Trigger: CTTTGTACAGAGGCTCACAGGACACCTGCACAACAAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076949.13 ENSMUST00000201053.4 ENSMUST00000202394.4 |
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| CDS CAA 90 bp | TGCACAGCTGGGTCCAGGTTGATTACATACGGTGGACAGCCTTTGTaGTGCAGGTGTCCTGTGAGCCTCTGTACAAAGGTAGTTTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: CTAGSRLITYGGQPL*CRCPVSLCTKVVFP Trigger: CGGGAAAACTACCTTTGTACAGAGGCTCACAGGACACCTGCACAACAAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076949.13 ENSMUST00000201053.4 ENSMUST00000202394.4 |
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| CDS CAA 90 bp | TCAATATTGGCGGGAAAGGGGACTTCATGCACAGCTGGGTCCAGGTaGATTACATACGGTGGACAGCCTTTGTTGTGCAGGTGTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SILAGKGTSCTAGSR*ITYGGQPLLCRCPV Trigger: CACAGGACACCTGCACAACAAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGAAGTCCCCTTTCCCGCCAATATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076949.13 ENSMUST00000201053.4 ENSMUST00000202394.4 |
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| CDS CAA 90 bp | CACCAGGCTCATGGAACGAGTCAGGTTACTGACGTAGGTAGTCTCTaGGTTCAAGGCATCCTGGAAAGCCTCAAAATCCTGCATCCACTC | + |
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Preference number: 6 (lower is better) Translates to: HQAHGTSQVTDVGSL*VQGILESLKILHPL Trigger: GAGTGGATGCAGGATTTTGAGGCTTTCCAGGATGCCTTGAACCAAGAGACTACCTACGTCAGTAACCTGACTCGTTCCATGAGCCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS CCA 72 bp | CTCAATATTGGCGGGAAAGGGGACTTCATGCACAGCTaGGTCCAGGTTGATTACATACGGTGGACAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LNIGGKGDFMHS*VQVDYIRWTAF Trigger: AAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGAAGTCCCCTTTCCCGCCAATATTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201053.4 |
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| CDS CAA 72 bp | GGGTCCAGGTTGATTACATACGGTGGACAGCCTTTGTaGTGCAGGTGTCCTGTGAGCCTCTGTACAAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: GSRLITYGGQPL*CRCPVSLCTKV Trigger: TACCTTTGTACAGAGGCTCACAGGACACCTGCACAACAAAGGCTGTCCACCGTATGTAATCAACCTGGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076949.13 ENSMUST00000201053.4 ENSMUST00000202394.4 |
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| CDS CAA 90 bp | TCATGCACAGCTGGGTCCAGGTTGATTACATACGGTGGACAGCCTTaGTTGTGCAGGTGTCCTGTGAGCCTCTGTACAAAGGTAGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SCTAGSRLITYGGQP*LCRCPVSLCTKVVF Trigger: GAAAACTACCTTTGTACAGAGGCTCACAGGACACCTGCACAACAAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076949.13 ENSMUST00000201053.4 ENSMUST00000202394.4 |
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| CDS CAA 90 bp | TCCGAAGACGCTCCAGTTGCTCCTTCTGCTGATTACTCTGGGCATTaGCCAGTGATTTCTTCAGACGCTCGTATTCAGGACGATATTCCC | + |
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Preference number: 6 (lower is better) Translates to: SEDAPVAPSADYSGH*PVISSDARIQDDIP Trigger: GGGAATATCGTCCTGAATACGAGCGTCTGAAGAAATCACTGGCAAATGCCCAGAGTAATCAGCAGAAGGAGCAACTGGAGCGTCTTCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS GCA 72 bp | TCTCGGATATCAATATTGGCGGGAAAGGGGACTTCATaGACAGCTGGGTCCAGGTTGATTACATACGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SRISILAGKGTS*TAGSRLITYGG Trigger: TCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGAAGTCCCCTTTCCCGCCAATATTGATATCCGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076949.13 ENSMUST00000202394.4 |
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| CDS GCA 72 bp | TCTTGGTTCAAGGCATCCTGGAAAGCCTCAAAATCCTaGATCCACTCCACGGCAAAGCTGTGGTCAATGATG | + |
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Preference number: 6 (lower is better) Translates to: SWFKASWKASKS*IHSTAKLWSMM Trigger: CATCATTGACCACAGCTTTGCCGTGGAGTGGATGCAGGATTTTGAGGCTTTCCAGGATGCCTTGAACCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS CCA 72 bp | ATCAATATTGGCGGGAAAGGGGACTTCATGCACAGCTaGGTCCAGGTTGATTACATACGGTGGACAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: INIGGKGDFMHS*VQVDYIRWTAF Trigger: AAAGGCTGTCCACCGTATGTAATCAACCTGGACCCAGCTGTGCATGAAGTCCCCTTTCCCGCCAATATTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076949.13 ENSMUST00000202394.4 |
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| CDS CAA 72 bp | GCTCCAGTTGCTCCTTCTGCTGATTACTCTGGGCATTaGCCAGTGATTTCTTCAGACGCTCGTATTCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: APVAPSADYSGH*PVISSDARIQD Trigger: GTCCTGAATACGAGCGTCTGAAGAAATCACTGGCAAATGCCCAGAGTAATCAGCAGAAGGAGCAACTGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS TCA 72 bp | CTCTTCCAGTGTGCCATTGACTCCTCCATGAAGTTCTaGAATGCTGGCTCTTCACGGCTTTCCTCTGTAACT | + |
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Preference number: 6 (lower is better) Translates to: LFQCAIDSSMKF*NAGSSRLSSVT Trigger: AGTTACAGAGGAAAGCCGTGAAGAGCCAGCATTTCAGAACTTCATGGAGGAGTCAATGGCACACTGGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS GCA 72 bp | TCCAGGTTGATTACATACGGTGGACAGCCTTTGTTGTaGAGGTGTCCTGTGAGCCTCTGTACAAAGGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: SRLITYGGQPLL*RCPVSLCTKVV Trigger: AACTACCTTTGTACAGAGGCTCACAGGACACCTGCACAACAAAGGCTGTCCACCGTATGTAATCAACCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076949.13 ENSMUST00000201053.4 ENSMUST00000202394.4 |
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| CDS GCA 72 bp | CTCGTATTCAGGACGATATTCCCTTTCGTACTCCTCTaGAGCACTGGTGACCTGAGTACAGAGTTCATCGAA | + |
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Preference number: 6 (lower is better) Translates to: LVFRTIFPFVLL*STGDLSTEFIE Trigger: TTCGATGAACTCTGTACTCAGGTCACCAGTGCTGCAGAGGAGTACGAAAGGGAATATCGTCCTGAATACGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS CAA 72 bp | CATGGAACGAGTCAGGTTACTGACGTAGGTAGTCTCTaGGTTCAAGGCATCCTGGAAAGCCTCAAAATCCTG | + |
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Preference number: 6 (lower is better) Translates to: HGTSQVTDVGSL*VQGILESLKIL Trigger: CAGGATTTTGAGGCTTTCCAGGATGCCTTGAACCAAGAGACTACCTACGTCAGTAACCTGACTCGTTCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS TCA 72 bp | ATATCCTTCCGAAGACGCTCCAGTTGCTCCTTCTGCTaGTTACTCTGGGCATTTGCCAGTGATTTCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: ISFRRRSSCSFC*LLWAFASDFFR Trigger: TCTGAAGAAATCACTGGCAAATGCCCAGAGTAATCAGCAGAAGGAGCAACTGGAGCGTCTTCGGAAGGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS TCA 72 bp | CATATTGGACATGAAGGTCACTGGGTTAGTGCTCCGTaGTGTATCCATGACATAGATGACTACTGTTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: HIGHEGHWVSAP*CIHDIDDYCWK Trigger: TTTCCAACAGTAGTCATCTATGTCATGGATACATCACGGAGCACTAACCCAGTGACCTTCATGTCCAATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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| CDS TCA 72 bp | CTATACCTCCGTTTGGCCCAAGTCCATATTGCTTCATaGCTTCTTTATATTTCACTGTGTCTCGGATATCAA | + |
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Preference number: 6 (lower is better) Translates to: LYLRLAQVHIAS*LLYISLCLGYQ Trigger: TTGATATCCGAGACACAGTGAAATATAAAGAAGTCATGAAGCAATATGGACTTGGGCCAAACGGAGGTATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076949.13 |
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