Pregenerated sensors for GPM6A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031517Ensembl transcript IDs: ENSMUST00000033915.9
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAAGCACTTTGTTCTACATTTCAAAAACGCCACCATCAAGCTGTTaGCACATTTATGTACAAAACAGATTACTTGTAATGCCTGCTACA | + |
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Preference number: 1 (lower is better) Translates to: ASTLFYISKTPPSSC*HIYVQNRLLVMPAT Trigger: TGTAGCAGGCATTACAAGTAATCTGTTTTGTACATAAATGTGCCAACAGCTTGATGGTGGCGTTTTTGAAATGTAGAACAAAGTGCTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| 3UTR-3UTR GCA 90 bp | CATAATCATGCCACAGAAACGCTAGTAATACCCCCTACCTACTACAAGAACTTGGTAGCATTCTCGTTTTaGTCTTCACAGGTTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: HNHATETLVIPPTYYKNLVAFSF*SSQVGW Trigger: CCATCCAACCTGTGAAGAGCAAAACGAGAATGCTAC...CAAGTTCTTGTAGTAGGTAGGGGGTATTACTAGCGTTTCTGTGGCATGATTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| 3UTR-3UTR TCA 90 bp | TATATATCACTACACTCCCAAACAATACATTCTCTAGTGGCCTCTGACCACCCTGTACAACGGTCCCTTTaGAGGTTACCTGTAGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: YISLHSQTIHSLVASDHPVQRSL*RLPVVK Trigger: TTTAACTACAGGTAACCTTCAAAGGGACCGTTGTAC...AGGGTGGTCAGAGGCCACTAGAGAATGTATTGTTTGGGAGTGTAGTGATATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| 3UTR CAA 90 bp | GCCTCTGACCACCCTTTAGAAACACTACAGGTAAACCAACATAGATaGGAAGGCTGCAAGCAAAGCTATTATATTAATGGAAGTCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: ASDHPLETLQVNQHR*EGCKQSYYINGSLF Trigger: GAAAAGACTTCCATTAATATAATAGCTTTGCTTGCAGCCTTCCAATCTATGTTGGTTTACCTGTAGTGTTTCTAAAGGGTGGTCAGAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| 3UTR CAA 90 bp | TGCAAGCACTTTGTTCTACATTTCAAAAACGCCACCATCAAGCTGTaGGCACATTTATGTACAAAACAGATTACTTGTAATGCCTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: CKHFVLHFKNATIKL*AHLCTKQITCNACY Trigger: GTAGCAGGCATTACAAGTAATCTGTTTTGTACATAAATGTGCCAACAGCTTGATGGTGGCGTTTTTGAAATGTAGAACAAAGTGCTTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGCACAATACTACCTAGGTTTATACACTGACAAAATTTCTTGTCAGGCTACAGAAGGCAACTGGCCATaGATTAGCATTACTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: SAQYYLGLYTDKISCQATEGNWP*ISITVS Trigger: AGAAACAGTAATGCTAATGCATGGCCAGTTGCCTTC...TGTAGCCTGACAAGAAATTTTGTCAGTGTATAAACCTAGGTAGTATTGTGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| 3UTR-3UTR GCA 90 bp | TATATATCACTACACTCCCAAACAATACATTCTCTAGTGGCCTCTGACCACCCTCATAGATTGGAAGGCTaGAAGCAAAGCTATTATATT | + |
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Preference number: 2 (lower is better) Translates to: YISLHSQTIHSLVASDHPHRLEG*KQSYYI Trigger: AATATAATAGCTTTGCTTGCAGCCTTCCAATCTATG...AGGGTGGTCAGAGGCCACTAGAGAATGTATTGTTTGGGAGTGTAGTGATATATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| 3UTR-3UTR GCA 90 bp | AACGCTAGTAATACCCCCTACCTACTACAAGAACTTGTAAAATTACTGATGATGAAATTTTATTGGGAATaGACTTACACTGAAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: NASNTPYLLQELVKLLMMKFYWE*TYTEGG Trigger: TCCTCCTTCAGTGTAAGTGCATTCCCAATAAAATTT...CATCATCAGTAATTTTACAAGTTCTTGTAGTAGGTAGGGGGTATTACTAGCGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| 3UTR-3UTR CAA 90 bp | TACAGAATGCATAATCATGCCACAGAAACGCTAGTAATACCCCCTACCTACTACGTAAACCAACATAGATaGGAAGGCTGCAAGCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: YRMHNHATETLVIPPTYYVNQHR*EGCKQS Trigger: GCTTTGCTTGCAGCCTTCCAATCTATGTTGGTTTAC...GTAGTAGGTAGGGGGTATTACTAGCGTTTCTGTGGCATGATTATGCATTCTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| 3UTR TCA 72 bp | ACTACACTCCCAAACAATACATTCTCTAGTGGCCTCTaGCCACCCTTTAGAAACACTACAGGTAAACCAACA | + |
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Preference number: 3 (lower is better) Translates to: TTLPNNTFSSGL*PPFRNTTGKPT Trigger: TGTTGGTTTACCTGTAGTGTTTCTAAAGGGTGGTCAGAGGCCACTAGAGAATGTATTGTTTGGGAGTGTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| 3UTR-3UTR CAA 90 bp | AACGCTAGTAATACCCCCTACCTACTACAAGAACTTGTAAAATTACTGATGATGTTTGCTCTTCACAGGTaGGATGGTTGGATGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: NASNTPYLLQELVKLLMMFALHR*DGWMAL Trigger: AAGGGCCATCCAACCATCCAACCTGTGAAGAGCAAA...CATCATCAGTAATTTTACAAGTTCTTGTAGTAGGTAGGGGGTATTACTAGCGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| 3UTR-3UTR CAA 90 bp | AACGCTAGTAATACCCCCTACCTACTACAAGAACTTGTAAAATTACTGATGATGCTACCCTTAGAAATTTaGAAATTGCACCTTAGATGG | + |
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Preference number: 3 (lower is better) Translates to: NASNTPYLLQELVKLLMMLPLEI*KLHLRW Trigger: CCATCTAAGGTGCAATTTCAAAATTTCTAAGGGTAG...CATCATCAGTAATTTTACAAGTTCTTGTAGTAGGTAGGGGGTATTACTAGCGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| 3UTR CCA 72 bp | TTGTTCTACATTTCAAAAACGCCACCATCAAGCTGTTaGCACATTTATGTACAAAACAGATTACTTGTAATG | + |
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Preference number: 3 (lower is better) Translates to: LFYISKTPPSSC*HIYVQNRLLVM Trigger: CATTACAAGTAATCTGTTTTGTACATAAATGTGCCAACAGCTTGATGGTGGCGTTTTTGAAATGTAGAACAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR GCA 90 bp | CACAATCTTAGGAAGGCAACTGGCCATGCATTAGCATTACTGTTTCTACATGCTGAACAGGGCAACGCCTaGATACAGCAGGATGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: HNLRKATGHALALLFLHAEQGNA*IQQDGC Trigger: GCAACCATCCTGCTGTATGCAGGCGTTGCCCTGTTC...AGCATGTAGAAACAGTAATGCTAATGCATGGCCAGTTGCCTTCCTAAGATTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR GCA 90 bp | TTGGATGGTTGGATGGCCCTTAATGAAACACCAATGCCTTCGAGTGGTAAGGAAATACAGCAGGATGGTTaGAATCAGAGAAGCATAGGG | + |
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Preference number: 4 (lower is better) Translates to: LDGWMALNETPMPSSGKEIQQDG*NQRSIG Trigger: CCCTATGCTTCTCTGATTGCAACCATCCTGCTGTAT...TTCCTTACCACTCGAAGGCATTGGTGTTTCATTAAGGGCCATCCAACCATCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR GCA 90 bp | CATAATCATGCCACAGAAACGCTAGTAATACCCCCTACCTACTACAAGAACTTGCATAGCAATAACTGCTaGTCCAGCTCCAGCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: HNHATETLVIPPTYYKNLHSNNC*SSSSKC Trigger: GCACTTGCTGGAGCTGGAGCAGCAGTTATTGCTATG...CAAGTTCTTGTAGTAGGTAGGGGGTATTACTAGCGTTTCTGTGGCATGATTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR CCA 90 bp | TACAGAATGCATAATCATGCCACAGAAACGCTAGTAATACCCCCTACCTACTACTCACATAGGCCCAGTTaGCAGACAGAACCATCAGGT | + |
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Preference number: 4 (lower is better) Translates to: YRMHNHATETLVIPPTYYSHRPS*QTEPSG Trigger: ACCTGATGGTTCTGTCTGCCAACTGGGCCTATGTGA...GTAGTAGGTAGGGGGTATTACTAGCGTTTCTGTGGCATGATTATGCATTCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR TCA 90 bp | CACAATCTTAGGAAGGCAACTGGCCATGCATTAGCATTACTGTTTCTACATGCTAGGTCTGCAGAATGTTaGCTGTTCCAGAAAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: HNLRKATGHALALLFLHARSAEC*LFQKGL Trigger: AAGCCCTTTCTGGAACAGTCAACATTCTGCAGACCT...AGCATGTAGAAACAGTAATGCTAATGCATGGCCAGTTGCCTTCCTAAGATTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR GCA 90 bp | CACAATCTTAGGAAGGCAACTGGCCATGCATTAGCATTACTGTTTCTACATGCTATGTCGTGCAGCTCCTaGTCTTCCTTTGACTTGATG | + |
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Preference number: 4 (lower is better) Translates to: HNLRKATGHALALLFLHAMSCSS*SSFDLM Trigger: CATCAAGTCAAAGGAAGAGCAGGAGCTGCACGACAT...AGCATGTAGAAACAGTAATGCTAATGCATGGCCAGTTGCCTTCCTAAGATTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR GCA 90 bp | CATAATCATGCCACAGAAACGCTAGTAATACCCCCTACCTACTACAAGAACTTGGTAGAATGGATGTCGTaGAGCTCCTGCTCTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: HNHATETLVIPPTYYKNLVEWMS*SSCSSF Trigger: AAAGGAAGAGCAGGAGCTGCACGACATCCATTCTAC...CAAGTTCTTGTAGTAGGTAGGGGGTATTACTAGCGTTTCTGTGGCATGATTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR CCA 90 bp | TGTACAAAACAGATTACTTGTAATGCCTGCTACAAAGCACTCCATGAAAATACACTCCCTCCACTAGAGTaGTGTTCCGGCAGATGGTCC | + |
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Preference number: 4 (lower is better) Translates to: CTKQITCNACYKALHENTLPPLE*CSGRWS Trigger: GGACCATCTGCCGGAACACCACTCTAGTGGAGGGAG...TGTATTTTCATGGAGTGCTTTGTAGCAGGCATTACAAGTAATCTGTTTTGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR TCA 90 bp | CACAATCTTAGGAAGGCAACTGGCCATGCATTAGCATTACTGTTTCTACATGCTCAGCAAGTGCCACAATaGACAAGTGGAAGGTCATAT | + |
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Preference number: 4 (lower is better) Translates to: HNLRKATGHALALLFLHAQQVPQ*TSGRSY Trigger: ATATGACCTTCCACTTGTTCATTGTGGCACTTGCTG...AGCATGTAGAAACAGTAATGCTAATGCATGGCCAGTTGCCTTCCTAAGATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR CCA 90 bp | AGTGCACAATACTACCTAGGTTTATACACTGACAAAATTTCTTGTCAGGCTACATTGGAGCGAGTAGAATaGATGTCGTGCAGCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SAQYYLGLYTDKISCQATLERVE*MSCSSC Trigger: GCAGGAGCTGCACGACATCCATTCTACTCGCTCCAA...TGTAGCCTGACAAGAAATTTTGTCAGTGTATAAACCTAGGTAGTATTGTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR GCA 90 bp | AACGCTAGTAATACCCCCTACCTACTACAAGAACTTGTAAAATTACTGATGATGGTCTCCAGCAGTCCTTaGCAACTCAAAGTAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: NASNTPYLLQELVKLLMMVSSSP*QLKVGL Trigger: CAGACCTACTTTGAGTTGGCAAGGACTGCTGGAGAC...CATCATCAGTAATTTTACAAGTTCTTGTAGTAGGTAGGGGGTATTACTAGCGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR CCA 90 bp | TACAGAATGCATAATCATGCCACAGAAACGCTAGTAATACCCCCTACCTACTACGCCACAATGAACAAGTaGAAGGTCATATTCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: YRMHNHATETLVIPPTYYATMNK*KVIFSS Trigger: TGAGCTGAATATGACCTTCCACTTGTTCATTGTGGC...GTAGTAGGTAGGGGGTATTACTAGCGTTTCTGTGGCATGATTATGCATTCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR TCA 90 bp | TGGCACATTTATGTACAAAACAGATTACTTGTAATGCCTGCTACAAAGCACTCCAGATGGTCCACACATTaGAATACATGTACACGGGCA | + |
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Preference number: 4 (lower is better) Translates to: WHIYVQNRLLVMPATKHSRWSTH*NTCTRA Trigger: TGCCCGTGTACATGTATTTCAATGTGTGGACCATCT...GGAGTGCTTTGTAGCAGGCATTACAAGTAATCTGTTTTGTACATAAATGTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR GCA 90 bp | AGTGCACAATACTACCTAGGTTTATACACTGACAAAATTTCTTGTCAGGCTACATCCAGCTCCAGCAAGTaGCACAATGAACAAGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SAQYYLGLYTDKISCQATSSSSK*HNEQVE Trigger: TTCCACTTGTTCATTGTGGCACTTGCTGGAGCTGGA...TGTAGCCTGACAAGAAATTTTGTCAGTGTATAAACCTAGGTAGTATTGTGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR GCA 90 bp | AGTGCACAATACTACCTAGGTTTATACACTGACAAAATTTCTTGTCAGGCTACACTTCGTACTTCTGCATaGGGCAGGCATCTTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: SAQYYLGLYTDKISCQATLRTSA*GRHLSH Trigger: ATGTGAAAGATGCCTGCCGCATGCAGAAGTACGAAG...TGTAGCCTGACAAGAAATTTTGTCAGTGTATAAACCTAGGTAGTATTGTGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR GCA 90 bp | CACAATCTTAGGAAGGCAACTGGCCATGCATTAGCATTACTGTTTCTACATGCTCTACCATCAGTAAAATaGCATAGACAAAGAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: HNLRKATGHALALLFLHALPSVK*HRQRKQ Trigger: CTGCTTTCTTTGTCTATGGCATTTTACTGATGGTAG...AGCATGTAGAAACAGTAATGCTAATGCATGGCCAGTTGCCTTCCTAAGATTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR TCA 90 bp | TGTACAAAACAGATTACTTGTAATGCCTGCTACAAAGCACTCCATGAAAATACAGCTCTTCCTTTGACTTaGTGTCTTCGTACTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: CTKQITCNACYKALHENTALPLT*CLRTSA Trigger: TGCAGAAGTACGAAGACATCAAGTCAAAGGAAGAGC...TGTATTTTCATGGAGTGCTTTGTAGCAGGCATTACAAGTAATCTGTTTTGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| 3UTR CAA 72 bp | AGTACACAAGTGTATTTATTACATTTTGCAAGCACTTaGTTCTACATTTCAAAAACGCCACCATCAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: STQVYLLHFAST*FYISKTPPSSC Trigger: ACAGCTTGATGGTGGCGTTTTTGAAATGTAGAACAAAGTGCTTGCAAAATGTAATAAATACACTTGTGTACT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS TCA 90 bp | GTTCCGGCAGATGGTCCACACATTGAAATACATGTACACGGGCAGTaGGGTGAAAGCTGTGACTCCCAGCCAGGCCAACATGAAGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: VPADGPHIEIHVHGQ*GESCDSQPGQHEEV Trigger: TACCTCTTCATGTTGGCCTGGCTGGGAGTCACAGCTTTCACCTCACTGCCCGTGTACATGTATTTCAATGTGTGGACCATCTGCCGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS GCA 90 bp | GCCACAGCCACAGAACAGGGCAACGCCTGCATACAGCAGGATGGTTaGAATCAGAGAAGCATAGGGAATACCTCCCAGGCATTTAATGCA | + |
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Preference number: 5 (lower is better) Translates to: ATATEQGNACIQQDG*NQRSIGNTSQAFNA Trigger: TGCATTAAATGCCTGGGAGGTATTCCCTATGCTTCTCTGATTGCAACCATCCTGCTGTATGCAGGCGTTGCCCTGTTCTGTGGCTGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS GCA 90 bp | TTGAGCCGCTCTTTGGAGCGAGTAGAATGGATGTCGTGCAGCTCCTaGTCTTCCTTTGACTTGATGTCTTCGTACTTCTGCATGCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSRSLERVEWMSCSS*SSFDLMSSYFCMRQ Trigger: CTGCCGCATGCAGAAGTACGAAGACATCAAGTCAAAGGAAGAGCAGGAGCTGCACGACATCCATTCTACTCGCTCCAAAGAGCGGCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS TCA 90 bp | TTTGGAGCGAGTAGAATGGATGTCGTGCAGCTCCTGCTCTTCCTTTaGCTTGATGTCTTCGTACTTCTGCATGCGGCAGGCATCTTTCAC | + |
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Preference number: 5 (lower is better) Translates to: FGASRMDVVQLLLFL*LDVFVLLHAAGIFH Trigger: GTGAAAGATGCCTGCCGCATGCAGAAGTACGAAGACATCAAGTCAAAGGAAGAGCAGGAGCTGCACGACATCCATTCTACTCGCTCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS GCA 90 bp | CAGGTAGTGGACCATAGCAATAACTGCTGCTCCAGCTCCAGCAAGTaGCACAATGAACAAGTGGAAGGTCATATTCAGCTCAGTAGATTC | + |
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Preference number: 5 (lower is better) Translates to: QVVDHSNNCCSSSSK*HNEQVEGHIQLSRF Trigger: GAATCTACTGAGCTGAATATGACCTTCCACTTGTTCATTGTGGCACTTGCTGGAGCTGGAGCAGCAGTTATTGCTATGGTCCACTACCTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR CAA 90 bp | TACAGAATGCATAATCATGCCACAGAAACGCTAGTAATACCCCCTACCTACTACGATCCAAGCAGAGATTaGCTCCCTCCACTAGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: YRMHNHATETLVIPPTYYDPSRD*LPPLEW Trigger: CCACTCTAGTGGAGGGAGCAAATCTCTGCTTGGATC...GTAGTAGGTAGGGGGTATTACTAGCGTTTCTGTGGCATGATTATGCATTCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR CAA 90 bp | TATATATCACTACACTCCCAAACAATACATTCTCTAGTGGCCTCTGACCACCCTGCATTGAGCCGCTCTTaGGAGCGAGTAGAATGGATG | + |
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Preference number: 5 (lower is better) Translates to: YISLHSQTIHSLVASDHPALSRS*ERVEWM Trigger: CATCCATTCTACTCGCTCCAAAGAGCGGCTCAATGC...AGGGTGGTCAGAGGCCACTAGAGAATGTATTGTTTGGGAGTGTAGTGATATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR CAA 90 bp | TACAGAATGCATAATCATGCCACAGAAACGCTAGTAATACCCCCTACCTACTACTGTCTCCAGCAGTCCTaGCCAACTCAAAGTAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: YRMHNHATETLVIPPTYYCLQQS*PTQSRS Trigger: AGACCTACTTTGAGTTGGCAAGGACTGCTGGAGACA...GTAGTAGGTAGGGGGTATTACTAGCGTTTCTGTGGCATGATTATGCATTCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS GCA 90 bp | GATGTCAATCATAGTGAAAACATCCAGTGTGTCTCCAGCAGTCCTTaGCAACTCAAAGTAGGTCTGCAGAATGTTGACTGTTCCAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: DVNHSENIQCVSSSP*QLKVGLQNVDCSRK Trigger: CTTTCTGGAACAGTCAACATTCTGCAGACCTACTTTGAGTTGGCAAGGACTGCTGGAGACACACTGGATGTTTTCACTATGATTGACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR CAA 90 bp | CACAATCTTAGGAAGGCAACTGGCCATGCATTAGCATTACTGTTTCTACATGCTCAGATGGTCCACACATaGAAATACATGTACACGGGC | + |
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Preference number: 5 (lower is better) Translates to: HNLRKATGHALALLFLHAQMVHT*KYMYTG Trigger: GCCCGTGTACATGTATTTCAATGTGTGGACCATCTG...AGCATGTAGAAACAGTAATGCTAATGCATGGCCAGTTGCCTTCCTAAGATTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR CAA 90 bp | CACAATCTTAGGAAGGCAACTGGCCATGCATTAGCATTACTGTTTCTACATGCTTCTTTTCCTCTCCAATaGTCACAATCCCAAACTGAC | + |
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Preference number: 5 (lower is better) Translates to: HNLRKATGHALALLFLHASFPLQ*SQSQTD Trigger: GTCAGTTTGGGATTGTGACAATTGGAGAGGAAAAGA...AGCATGTAGAAACAGTAATGCTAATGCATGGCCAGTTGCCTTCCTAAGATTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR CAA 90 bp | AACGCTAGTAATACCCCCTACCTACTACAAGAACTTGTAAAATTACTGATGATGCATACAGCAGGATGGTaGCAATCAGAGAAGCATAGG | + |
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Preference number: 5 (lower is better) Translates to: NASNTPYLLQELVKLLMMHTAGW*QSEKHR Trigger: CCTATGCTTCTCTGATTGCAACCATCCTGCTGTATG...CATCATCAGTAATTTTACAAGTTCTTGTAGTAGGTAGGGGGTATTACTAGCGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS-3UTR CAA 90 bp | TGTACAAAACAGATTACTTGTAATGCCTGCTACAAAGCACTCCATGAAAATACATGCTCTTCCTTTGACTaGATGTCTTCGTACTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: CTKQITCNACYKALHENTCSSFD*MSSYFC Trigger: GCAGAAGTACGAAGACATCAAGTCAAAGGAAGAGCA...TGTATTTTCATGGAGTGCTTTGTAGCAGGCATTACAAGTAATCTGTTTTGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS CAA 72 bp | CACAGAACAGGGCAACGCCTGCATACAGCAGGATGGTaGCAATCAGAGAAGCATAGGGAATACCTCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: HRTGQRLHTAGW*QSEKHREYLPG Trigger: GCCTGGGAGGTATTCCCTATGCTTCTCTGATTGCAACCATCCTGCTGTATGCAGGCGTTGCCCTGTTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS GCA 72 bp | ACAGAACAGGGCAACGCCTGCATACAGCAGGATGGTTaGAATCAGAGAAGCATAGGGAATACCTCCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TEQGNACIQQDG*NQRSIGNTSQA Trigger: TGCCTGGGAGGTATTCCCTATGCTTCTCTGATTGCAACCATCCTGCTGTATGCAGGCGTTGCCCTGTTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS CCA 72 bp | AGCCACAGAACAGGGCAACGCCTGCATACAGCAGGATaGTTGCAATCAGAGAAGCATAGGGAATACCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SHRTGQRLHTAG*LQSEKHREYLP Trigger: TGGGAGGTATTCCCTATGCTTCTCTGATTGCAACCATCCTGCTGTATGCAGGCGTTGCCCTGTTCTGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS CAA 72 bp | TCACAATCCCAAACTGACGCAGATCCAAGCAGAGATTaGCTCCCTCCACTAGAGTGGTGTTCCGGCAGATGG | + |
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Preference number: 6 (lower is better) Translates to: SQSQTDADPSRD*LPPLEWCSGRW Trigger: CCATCTGCCGGAACACCACTCTAGTGGAGGGAGCAAATCTCTGCTTGGATCTGCGTCAGTTTGGGATTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS CAA 90 bp | TTTGCTCCCTCCACTAGAGTGGTGTTCCGGCAGATGGTCCACACATaGAAATACATGTACACGGGCAGTGAGGTGAAAGCTGTGACTCCC | + |
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Preference number: 6 (lower is better) Translates to: FAPSTRVVFRQMVHT*KYMYTGSEVKAVTP Trigger: GGGAGTCACAGCTTTCACCTCACTGCCCGTGTACATGTATTTCAATGTGTGGACCATCTGCCGGAACACCACTCTAGTGGAGGGAGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS CAA 90 bp | CTCCAATTGTCACAATCCCAAACTGACGCAGATCCAAGCAGAGATTaGCTCCCTCCACTAGAGTGGTGTTCCGGCAGATGGTCCACACAT | + |
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Preference number: 6 (lower is better) Translates to: LQLSQSQTDADPSRD*LPPLEWCSGRWSTH Trigger: ATGTGTGGACCATCTGCCGGAACACCACTCTAGTGGAGGGAGCAAATCTCTGCTTGGATCTGCGTCAGTTTGGGATTGTGACAATTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS TCA 72 bp | GATGGTCCACACATTGAAATACATGTACACGGGCAGTaGGGTGAAAGCTGTGACTCCCAGCCAGGCCAACAT | + |
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Preference number: 6 (lower is better) Translates to: DGPHIEIHVHGQ*GESCDSQPGQH Trigger: ATGTTGGCCTGGCTGGGAGTCACAGCTTTCACCTCACTGCCCGTGTACATGTATTTCAATGTGTGGACCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS GCA 72 bp | TTGAGCCGCTCTTTGGAGCGAGTAGAATGGATGTCGTaGAGCTCCTGCTCTTCCTTTGACTTGATGTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: LSRSLERVEWMS*SSCSSFDLMSS Trigger: CGAAGACATCAAGTCAAAGGAAGAGCAGGAGCTGCACGACATCCATTCTACTCGCTCCAAAGAGCGGCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS GCA 72 bp | GACCATAGCAATAACTGCTGCTCCAGCTCCAGCAAGTaGCACAATGAACAAGTGGAAGGTCATATTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: DHSNNCCSSSSK*HNEQVEGHIQL Trigger: GAGCTGAATATGACCTTCCACTTGTTCATTGTGGCACTTGCTGGAGCTGGAGCAGCAGTTATTGCTATGGTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS GCA 72 bp | AGACAGAACCATCAGGTAGTGGACCATAGCAATAACTaGTGCTCCAGCTCCAGCAAGTGCCACAATGAACAA | + |
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Preference number: 6 (lower is better) Translates to: RQNHQVVDHSNN*CSSSSKCHNEQ Trigger: TTGTTCATTGTGGCACTTGCTGGAGCTGGAGCAGCAGTTATTGCTATGGTCCACTACCTGATGGTTCTGTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS CCA 72 bp | GCTGCTCCAGCTCCAGCAAGTGCCACAATGAACAAGTaGAAGGTCATATTCAGCTCAGTAGATTCACACATC | + |
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Preference number: 6 (lower is better) Translates to: AAPAPASATMNK*KVIFSSVDSHI Trigger: GATGTGTGAATCTACTGAGCTGAATATGACCTTCCACTTGTTCATTGTGGCACTTGCTGGAGCTGGAGCAGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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| CDS GCA 72 bp | CATAGTGAAAACATCCAGTGTGTCTCCAGCAGTCCTTaGCAACTCAAAGTAGGTCTGCAGAATGTTGACTGT | + |
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Preference number: 6 (lower is better) Translates to: HSENIQCVSSSP*QLKVGLQNVDC Trigger: ACAGTCAACATTCTGCAGACCTACTTTGAGTTGGCAAGGACTGCTGGAGACACACTGGATGTTTTCACTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033915.9 |
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