Pregenerated sensors for GPLD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021340Ensembl transcript IDs: ENSMUST00000021773.13
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTGCTGTGGCAGAGGGGAGCTGCCCAGGTCATGGCAGCTCAGCTaGCAACAGAGAGGCAAGGAAGGCCCAGGGGTCCTGATACAACCC | + |
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Preference number: 1 (lower is better) Translates to: GCCGRGELPRSWQLS*QQRGKEGPGVLIQP Trigger: GGGTTGTATCAGGACCCCTGGGCCTTCCTTGCCTCTCTGTTGCCAGCTGAGCTGCCATGACCTGGGCAGCTCCCCTCTGCCACAGCACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR TCA 90 bp | TCCCAAGCACCGGCAGCAAACTCAGAGGATGCAGAAGAAAGAGCTTaGGAGGGGACCTCACAGCCTGCTGCTCCTATCACACGGCGTCCA | + |
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Preference number: 1 (lower is better) Translates to: SQAPAANSEDAEERA*EGTSQPAAPITRRP Trigger: TGGACGCCGTGTGATAGGAGCAGCAGGCTGTGAGGTCCCCTCTCAAGCTCTTTCTTCTGCATCCTCTGAGTTTGCTGCCGGTGCTTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR GCA 90 bp | AGGCCATGGTTGCTCCACCAGCTGTGCCTCCAGTCCTTGAGAGGCTaGAGCAGGGAGATTACAAAGAGTTTGAGGCCAGCCTGGGCTACA | + |
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Preference number: 1 (lower is better) Translates to: RPWLLHQLCLQSLRG*SREITKSLRPAWAT Trigger: TGTAGCCCAGGCTGGCCTCAAACTCTTTGTAATCTCCCTGCTGCAGCCTCTCAAGGACTGGAGGCACAGCTGGTGGAGCAACCATGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CCA 90 bp | AGTGCTGCTCATTTTAGAGTGCTCACTCGCCTGGTGGAGCAGAGCTaGGGGGTCAGCCCTCTAACTGCACGGGAAGAGACAGATCGCTCA | + |
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Preference number: 1 (lower is better) Translates to: SAAHFRVLTRLVEQS*GVSPLTAREETDRS Trigger: TGAGCGATCTGTCTCTTCCCGTGCAGTTAGAGGGCTGACCCCCCAGCTCTGCTCCACCAGGCGAGTGAGCACTCTAAAATGAGCAGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR TCA 90 bp | GGCAGCTCAGCTGGCAACAGAGAGGCAAGGAAGGCCCAGGGGTCCTaGTACAACCCAGTACGTAACTCTCCTCAACAGAGTCCTACTCCA | + |
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Preference number: 1 (lower is better) Translates to: GSSAGNREARKAQGS*YNPVRNSPQQSPTP Trigger: TGGAGTAGGACTCTGTTGAGGAGAGTTACGTACTGGGTTGTATCAGGACCCCTGGGCCTTCCTTGCCTCTCTGTTGCCAGCTGAGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR GCA 90 bp | AGGTGGGTTGATAAAGTCCCAAGCACCGGCAGCAAACTCAGAGGATaGAGAAGAAAGAGCTTGAGAGGGGACCTCACAGCCTGCTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: RWVDKVPSTGSKLRG*RRKSLRGDLTACCS Trigger: GGAGCAGCAGGCTGTGAGGTCCCCTCTCAAGCTCTTTCTTCTGCATCCTCTGAGTTTGCTGCCGGTGCTTGGGACTTTATCAACCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CCA 90 bp | GTGGGATCCGGTCTGTCCTTAACGTTCAGAGCCTCTGAGCCCATGTaGGCAGAGCAGAGGTCATCCTGTGAAGTGATTCCTGACAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: VGSGLSLTFRASEPM*AEQRSSCEVIPDSR Trigger: TCTGCTGTCAGGAATCACTTCACAGGATGACCTCTGCTCTGCCCACATGGGCTCAGAGGCTCTGAACGTTAAGGACAGACCGGATCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR GCA 90 bp | TTCCTGACAGCAGACTGGAATAGGCTAAACAGCTCACTGACAGGCTaGTGGGTGCTGGGATCCAGGAGCTGCGCTCAGCTTCATTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: FLTADWNRLNSSLTG*WVLGSRSCAQLHFC Trigger: ACAGAAATGAAGCTGAGCGCAGCTCCTGGATCCCAGCACCCAGCAGCCTGTCAGTGAGCTGTTTAGCCTATTCCAGTCTGCTGTCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CCA 90 bp | CTGACAGCAGACTGGAATAGGCTAAACAGCTCACTGACAGGCTGCTaGGTGCTGGGATCCAGGAGCTGCGCTCAGCTTCATTTCTGTGAT | + |
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Preference number: 1 (lower is better) Translates to: LTADWNRLNSSLTGC*VLGSRSCAQLHFCD Trigger: ATCACAGAAATGAAGCTGAGCGCAGCTCCTGGATCCCAGCACCCAGCAGCCTGTCAGTGAGCTGTTTAGCCTATTCCAGTCTGCTGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR TCA 90 bp | GAGCCTCTGAGCCCATGTGGGCAGAGCAGAGGTCATCCTGTGAAGTaGTTCCTGACAGCAGACTGGAATAGGCTAAACAGCTCACTGACA | + |
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Preference number: 1 (lower is better) Translates to: EPLSPCGQSRGHPVK*FLTADWNRLNSSLT Trigger: TGTCAGTGAGCTGTTTAGCCTATTCCAGTCTGCTGTCAGGAATCACTTCACAGGATGACCTCTGCTCTGCCCACATGGGCTCAGAGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR GCA 90 bp | GTGCACAAGGCTCTGGGGTTCGCCTTGCCATTTACATTTGCTAATTaGTGTCCGTGTACCAAAACGATGGCCCTTCTGCTGGCTGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: VHKALGFALPFTFAN*CPCTKTMALLLAVL Trigger: GAGCACAGCCAGCAGAAGGGCCATCGTTTTGGTACACGGACAGCAATTAGCAAATGTAAATGGCAAGGCGAACCCCAGAGCCTTGTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR GCA 90 bp | GATAGGTTGGACCACTACTTAAACCAAATGTCCCATTGTGCTTCCTaGTGTGCCTTAGGAGTCAGAGTGTGTACTCACAGCAGCTGTGCC | + |
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Preference number: 1 (lower is better) Translates to: DRLDHYLNQMSHCAS*CALGVRVCTHSSCA Trigger: GGCACAGCTGCTGTGAGTACACACTCTGACTCCTAAGGCACAGCAGGAAGCACAATGGGACATTTGGTTTAAGTAGTGGTCCAACCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR TCA 90 bp | AGGCCCACCTGGACTATAAGTAAGACACTGACTCAAAACACCATCTaGAATGAGGCTGCGAGTGCTGCTCATTTTAGAGTGCTCACTCGC | + |
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Preference number: 1 (lower is better) Translates to: RPTWTISKTLTQNTI*NEAASAAHFRVLTR Trigger: GCGAGTGAGCACTCTAAAATGAGCAGCACTCGCAGCCTCATTTCAGATGGTGTTTTGAGTCAGTGTCTTACTTATAGTCCAGGTGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR GCA 90 bp | TTCCTGCTGTGCCTTAGGAGTCAGAGTGTGTACTCACAGCAGCTGTaGCTTCCTTCCTTAGTGTCTGTAGTTGTACTTGACTGTTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: FLLCLRSQSVYSQQL*LPSLVSVVVLDCLE Trigger: TTCTAAACAGTCAAGTACAACTACAGACACTAAGGAAGGAAGGCACAGCTGCTGTGAGTACACACTCTGACTCCTAAGGCACAGCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR GCA 90 bp | CTAATTGCTGTCCGTGTACCAAAACGATGGCCCTTCTGCTGGCTGTaGTCTTTAGATAGGTTGGACCACTACTTAAACCAAATGTCCCAT | + |
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Preference number: 1 (lower is better) Translates to: LIAVRVPKRWPFCWL*SLDRLDHYLNQMSH Trigger: ATGGGACATTTGGTTTAAGTAGTGGTCCAACCTATCTAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGGTACACGGACAGCAATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CCA 90 bp | ACAGAGGACTCAATACAGTCAGTATCCTGTCGACTTGAAGATGTTTaGATTTCTGTAAGCTTTAAGTTTTCTTTATCTGATGCCTGTTAC | + |
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Preference number: 1 (lower is better) Translates to: TEDSIQSVSCRLEDV*ISVSFKFSLSDACY Trigger: GTAACAGGCATCAGATAAAGAAAACTTAAAGCTTACAGAAATCCAAACATCTTCAAGTCGACAGGATACTGACTGTATTGAGTCCTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR CCA 90 bp | GCACTGTGTGGCTGGGTTGAGGGAGCCCCTGCCTGCTGTGCACAAGGCTCTGGGCGATGGCCCTTCTGCTaGCTGTGCTCTTTAGATAGG | + |
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Preference number: 2 (lower is better) Translates to: ALCGWVEGAPACCAQGSGRWPFC*LCSLDR Trigger: CCTATCTAAAGAGCACAGCCAGCAGAAGGGCCATCG...CCCAGAGCCTTGTGCACAGCAGGCAGGGGCTCCCTCAACCCAGCCACACAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CAA 90 bp | GTCCCAAGCACCGGCAGCAAACTCAGAGGATGCAGAAGAAAGAGCTaGAGAGGGGACCTCACAGCCTGCTGCTCCTATCACACGGCGTCC | + |
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Preference number: 2 (lower is better) Translates to: VPSTGSKLRGCRRKS*RGDLTACCSYHTAS Trigger: GGACGCCGTGTGATAGGAGCAGCAGGCTGTGAGGTCCCCTCTCAAGCTCTTTCTTCTGCATCCTCTGAGTTTGCTGCCGGTGCTTGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR TCA 90 bp | CCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGATAGGTTGGACCACTACCACAGAGATCAGCAGTaGGGAGGGCCAGTGTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: PKRWPFCWLCSLDRLDHYHRDQQ*GGPVWP Trigger: GGGCCACACTGGCCCTCCTCACTGCTGATCTCTGTG...GTAGTGGTCCAACCTATCTAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR GCA 90 bp | CTAATTGCTGTCCGTGTACCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGACCTCACAGCCTGCTaGTCCTATCACACGGCGTCC | + |
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Preference number: 2 (lower is better) Translates to: LIAVRVPKRWPFCWLCSLDLTAC*SYHTAS Trigger: GGACGCCGTGTGATAGGAGCAGCAGGCTGTGAGGTC...TAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGGTACACGGACAGCAATTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR GCA 90 bp | AGACAGGCTTTTGTCCATCCATTACAGAGCAAAATCACTGGCACTGTGTGGCTGGGGGAAGAAGCAGGGTaGTGTGGCAGAGGGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: RQAFVHPLQSKITGTVWLGEEAG*CGRGEL Trigger: CAGCTCCCCTCTGCCACAGCACCCTGCTTCTTCCCC...CAGCCACACAGTGCCAGTGATTTTGCTCTGTAATGGATGGACAAAAGCCTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR CCA 90 bp | ATTACAGAGCAAAATCACTGGCACTGTGTGGCTGGGTTGAGGGAGCCCCTGCCTATCCTGGAGATGACTTaGCTCAAGAAAGCGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: ITEQNHWHCVAGLREPLPILEMT*LKKAGL Trigger: CAGCCCCGCTTTCTTGAGCCAAGTCATCTCCAGGAT...AGGCAGGGGCTCCCTCAACCCAGCCACACAGTGCCAGTGATTTTGCTCTGTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR CCA 90 bp | CTAATTGCTGTCCGTGTACCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGAGCTGCCCAGGTCATaGCAGCTCAGCTGGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: LIAVRVPKRWPFCWLCSLELPRS*QLSWQQ Trigger: CTGTTGCCAGCTGAGCTGCCATGACCTGGGCAGCTC...TAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGGTACACGGACAGCAATTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CAA 90 bp | TGCCTGCTGTGCACAAGGCTCTGGGGTTCGCCTTGCCATTTACATTaGCTAATTGCTGTCCGTGTACCAAAACGATGGCCCTTCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: CLLCTRLWGSPCHLH*LIAVRVPKRWPFCW Trigger: CCAGCAGAAGGGCCATCGTTTTGGTACACGGACAGCAATTAGCAAATGTAAATGGCAAGGCGAACCCCAGAGCCTTGTGCACAGCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR CCA 90 bp | CTCCCCAGGAGAAAATGTATACAGCCAGCTAATGTGTTTGCCGACCTCTCAGAAGCCTCTGAGCCCATGTaGGCAGAGCAGAGGTCATCC | + |
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Preference number: 2 (lower is better) Translates to: LPRRKCIQPANVFADLSEASEPM*AEQRSS Trigger: GGATGACCTCTGCTCTGCCCACATGGGCTCAGAGGC...TTCTGAGAGGTCGGCAAACACATTAGCTGGCTGTATACATTTTCTCCTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR TCA 90 bp | CTAATTGCTGTCCGTGTACCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGCAGAAGAAAGAGCTTaGGAGGGGACCTCACAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LIAVRVPKRWPFCWLCSLAEERA*EGTSQP Trigger: AGGCTGTGAGGTCCCCTCTCAAGCTCTTTCTTCTGC...TAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGGTACACGGACAGCAATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGTGCCTCCAGTCCTTGAGAGGCTGCAGCAGGGAGATTACAAAGAGTTTGTTGTGCTTCCTGCTGTaGCTTAGGAGTCAGAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: QLCLQSLRGCSREITKSLLCFLL*LRSQSV Trigger: CACACTCTGACTCCTAAGGCACAGCAGGAAGCACAA...CAAACTCTTTGTAATCTCCCTGCTGCAGCCTCTCAAGGACTGGAGGCACAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR CCA 90 bp | TTATTTGGGCTCACAGTTTTCGGCCATGTCAGCGCCAGGGTGCTTGGCCCTGTTCCACAGAAAAGGAGGTaGGTTGATAAAGTCCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: LFGLTVFGHVSARVLGPVPQKRR*VDKVPS Trigger: GCTTGGGACTTTATCAACCCACCTCCTTTTCTGTGG...AACAGGGCCAAGCACCCTGGCGCTGACATGGCCGAAAACTGTGAGCCCAAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCTCGTTTAAAACAAATGGCAAAGCAGGCCATGGTTGCTCCACCAGCTGTGGTGCTTGGCCCTGTTaGTTTGGGGCTGGGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: KFSFKTNGKAGHGCSTSCGAWPC*FGAGEE Trigger: TTCTTCCCCAGCCCCAAAGCAACAGGGCCAAGCACC...ACAGCTGGTGGAGCAACCATGGCCTGCTTTGCCATTTGTTTTAAACGAGAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR CCA 90 bp | GTCCTTGAGAGGCTGCAGCAGGGAGATTACAAAGAGTTTGAGGCCAGCCTGGGCGAGGAAATGTTTATTTaGGCTCACAGTTTTCGGCCA | + |
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Preference number: 2 (lower is better) Translates to: VLERLQQGDYKEFEASLGEEMFI*AHSFRP Trigger: TGGCCGAAAACTGTGAGCCCAAATAAACATTTCCTC...GCCCAGGCTGGCCTCAAACTCTTTGTAATCTCCCTGCTGCAGCCTCTCAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR TCA 90 bp | CTCCCCAGGAGAAAATGTATACAGCCAGCTAATGTGTTTGCCGACCTCTCAGAAAGATTACAAAGAGTTTaGGGCCAGCCTGGGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: LPRRKCIQPANVFADLSERLQRV*GQPGLQ Trigger: CTGTAGCCCAGGCTGGCCTCAAACTCTTTGTAATCT...TTCTGAGAGGTCGGCAAACACATTAGCTGGCTGTATACATTTTCTCCTGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CAA 90 bp | GTACCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGATAGGTaGGACCACTACTTAAACCAAATGTCCCATTGTGCTTCCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: VPKRWPFCWLCSLDR*DHYLNQMSHCASCC Trigger: ACAGCAGGAAGCACAATGGGACATTTGGTTTAAGTAGTGGTCCAACCTATCTAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CAA 90 bp | CCCTCTAACTGCACGGGAAGAGACAGATCGCTCATACCTGTAAGTTaGGAAGCTGTTGTTCTAATAACCATTCAGCCTGCCCTTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PSNCTGRDRSLIPVS*EAVVLITIQPALVC Trigger: ACACACAAGGGCAGGCTGAATGGTTATTAGAACAACAGCTTCCAAACTTACAGGTATGAGCGATCTGTCTCTTCCCGTGCAGTTAGAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR GCA 90 bp | CCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGATAGGTTGGACCACTACAGCAAACTCAGAGGATaGAGAAGAAAGAGCTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: PKRWPFCWLCSLDRLDHYSKLRG*RRKSLR Trigger: TCTCAAGCTCTTTCTTCTGCATCCTCTGAGTTTGCT...GTAGTGGTCCAACCTATCTAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR TCA 90 bp | ACAAATCCTCTGGCCATGTTTAGACAGGCTTTTGTCCATCCATTACAGAGCAAATGTCCATCCTGGAGATaGCTTGGCTCAAGAAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: TNPLAMFRQAFVHPLQSKCPSWR*LGSRKR Trigger: CCGCTTTCTTGAGCCAAGTCATCTCCAGGATGGACA...TTTGCTCTGTAATGGATGGACAAAAGCCTGTCTAAACATGGCCAGAGGATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR TCA 90 bp | AAGTTCTCGTTTAAAACAAATGGCAAAGCAGGCCATGGTTGCTCCACCAGCTGTGGTAGGGTTTTTGAGTaGCAGTGCTCCTTAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: KFSFKTNGKAGHGCSTSCGRVFE*QCSLKG Trigger: TCCCTTTAAGGAGCACTGTCACTCAAAAACCCTACC...ACAGCTGGTGGAGCAACCATGGCCTGCTTTGCCATTTGTTTTAAACGAGAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR GCA 90 bp | AAGAGACAGATCGCTCATACCTGTAAGTTTGGAAGCTGTTGTTCTAATAACCATATGTCAGCGCCAGGGTaGTTGGCCCTGTTGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: KRQIAHTCKFGSCCSNNHMSAPG*LALLLW Trigger: CCAAAGCAACAGGGCCAAGCACCCTGGCGCTGACAT...ATGGTTATTAGAACAACAGCTTCCAAACTTACAGGTATGAGCGATCTGTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR CCA 90 bp | CTCCCCAGGAGAAAATGTATACAGCCAGCTAATGTGTTTGCCGACCTCTCAGAATTCCTGACAGCAGACTaGAATAGGCTAAACAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LPRRKCIQPANVFADLSEFLTAD*NRLNSS Trigger: TGAGCTGTTTAGCCTATTCCAGTCTGCTGTCAGGAA...TTCTGAGAGGTCGGCAAACACATTAGCTGGCTGTATACATTTTCTCCTGGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CCA 72 bp | GCAGGGTGCTGTGGCAGAGGGGAGCTGCCCAGGTCATaGCAGCTCAGCTGGCAACAGAGAGGCAAGGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: AGCCGRGELPRS*QLSWQQRGKEG Trigger: GCCTTCCTTGCCTCTCTGTTGCCAGCTGAGCTGCCATGACCTGGGCAGCTCCCCTCTGCCACAGCACCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR GCA 72 bp | TTTCGGCCATGTCAGCGCCAGGGTGCTTGGCCCTGTTaGTTTGGGGCTGGGGAAGAAGCAGGGTGCTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: FRPCQRQGAWPC*FGAGEEAGCCG Trigger: GCCACAGCACCCTGCTTCTTCCCCAGCCCCAAAGCAACAGGGCCAAGCACCCTGGCGCTGACATGGCCGAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR GCA 72 bp | CTGGCACTGTGTGGCTGGGTTGAGGGAGCCCCTGCCTaGTGTGCACAAGGCTCTGGGGTTCGCCTTGCCATT | + |
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Preference number: 3 (lower is better) Translates to: LALCGWVEGAPA*CAQGSGVRLAI Trigger: AATGGCAAGGCGAACCCCAGAGCCTTGTGCACAGCAGGCAGGGGCTCCCTCAACCCAGCCACACAGTGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR GCA 72 bp | TTGCTCCACCAGCTGTGCCTCCAGTCCTTGAGAGGCTaGAGCAGGGAGATTACAAAGAGTTTGAGGCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: LLHQLCLQSLRG*SREITKSLRPA Trigger: GGCTGGCCTCAAACTCTTTGTAATCTCCCTGCTGCAGCCTCTCAAGGACTGGAGGCACAGCTGGTGGAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR TCA 72 bp | CCGGCAGCAAACTCAGAGGATGCAGAAGAAAGAGCTTaGGAGGGGACCTCACAGCCTGCTGCTCCTATCACA | + |
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Preference number: 3 (lower is better) Translates to: PAANSEDAEERA*EGTSQPAAPIT Trigger: TGTGATAGGAGCAGCAGGCTGTGAGGTCCCCTCTCAAGCTCTTTCTTCTGCATCCTCTGAGTTTGCTGCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR TCA 72 bp | GCTGGCAACAGAGAGGCAAGGAAGGCCCAGGGGTCCTaGTACAACCCAGTACGTAACTCTCCTCAACAGAGT | + |
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Preference number: 3 (lower is better) Translates to: AGNREARKAQGS*YNPVRNSPQQS Trigger: ACTCTGTTGAGGAGAGTTACGTACTGGGTTGTATCAGGACCCCTGGGCCTTCCTTGCCTCTCTGTTGCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR-3UTR CAA 90 bp | AGACAGGCTTTTGTCCATCCATTACAGAGCAAAATCACTGGCACTGTGTGGCTGGGGTGCTTGGCCCTGTaGCTTTGGGGCTGGGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RQAFVHPLQSKITGTVWLGCLAL*LWGWGR Trigger: TCTTCCCCAGCCCCAAAGCAACAGGGCCAAGCACCC...CAGCCACACAGTGCCAGTGATTTTGCTCTGTAATGGATGGACAAAAGCCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR GCA 72 bp | CCCTGCCTGCTGTGCACAAGGCTCTGGGGTTCGCCTTaGCATTTACATTTGCTAATTGCTGTCCGTGTACCA | + |
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Preference number: 3 (lower is better) Translates to: PCLLCTRLWGSP*HLHLLIAVRVP Trigger: TGGTACACGGACAGCAATTAGCAAATGTAAATGGCAAGGCGAACCCCAGAGCCTTGTGCACAGCAGGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CCA 72 bp | GGTCTGTCCTTAACGTTCAGAGCCTCTGAGCCCATGTaGGCAGAGCAGAGGTCATCCTGTGAAGTGATTCCT | + |
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Preference number: 3 (lower is better) Translates to: GLSLTFRASEPM*AEQRSSCEVIP Trigger: AGGAATCACTTCACAGGATGACCTCTGCTCTGCCCACATGGGCTCAGAGGCTCTGAACGTTAAGGACAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGCTGTGCCTTCCTTCCTTAGTGTCTGTAGTTGTACTTGACTGTTTAGAATCAGCGCCAGGGTGCTaGGCCCTGTTGCTTTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QQLCLPSLVSVVVLDCLESAPGC*ALLLWG Trigger: GCCCCAAAGCAACAGGGCCAAGCACCCTGGCGCTGA...TTCTAAACAGTCAAGTACAACTACAGACACTAAGGAAGGAAGGCACAGCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCCAGGAGAAAATGTATACAGCCAGCTAATGTGTTTGCCGACCTCTCAGAACAAAGCAGGCCATGGTaGCTCCACCAGCTGTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LPRRKCIQPANVFADLSEQSRPW*LHQLCL Trigger: GAGGCACAGCTGGTGGAGCAACCATGGCCTGCTTTG...TTCTGAGAGGTCGGCAAACACATTAGCTGGCTGTATACATTTTCTCCTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR CCA 72 bp | CACCGGAGAACTACTTTGTCCATCCTGGAGATGACTTaGCTCAAGAAAGCGGGGCTGAATAGAAGAGTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: HRRTTLSILEMT*LKKAGLNRRVP Trigger: CGGCACTCTTCTATTCAGCCCCGCTTTCTTGAGCCAAGTCATCTCCAGGATGGACAAAGTAGTTCTCCGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR CCA 72 bp | AGGCAAGAGAGCCAGGTATTCCCACAGAAAAGGAGGTaGGTTGATAAAGTCCCAAGCACCGGCAGCAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: RQESQVFPQKRR*VDKVPSTGSKL Trigger: GAGTTTGCTGCCGGTGCTTGGGACTTTATCAACCCACCTCCTTTTCTGTGGGAATACCTGGCTCTCTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR GCA 72 bp | GCTCTGGGGTTCGCCTTGCCATTTACATTTGCTAATTaGTGTCCGTGTACCAAAACGATGGCCCTTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ALGFALPFTFAN*CPCTKTMALLL Trigger: CAGCAGAAGGGCCATCGTTTTGGTACACGGACAGCAATTAGCAAATGTAAATGGCAAGGCGAACCCCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR GCA 72 bp | TGCCTTAGGAGTCAGAGTGTGTACTCACAGCAGCTGTaGCTTCCTTCCTTAGTGTCTGTAGTTGTACTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: CLRSQSVYSQQL*LPSLVSVVVLD Trigger: GTCAAGTACAACTACAGACACTAAGGAAGGAAGGCACAGCTGCTGTGAGTACACACTCTGACTCCTAAGGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR GCA 72 bp | CTACTTAAACCAAATGTCCCATTGTGCTTCCTGCTGTaGCTTAGGAGTCAGAGTGTGTACTCACAGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLKPNVPLCFLL*LRSQSVYSQQL Trigger: CAGCTGCTGTGAGTACACACTCTGACTCCTAAGGCACAGCAGGAAGCACAATGGGACATTTGGTTTAAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR GCA 72 bp | GTCCGTGTACCAAAACGATGGCCCTTCTGCTGGCTGTaGTCTTTAGATAGGTTGGACCACTACTTAAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: VRVPKRWPFCWL*SLDRLDHYLNQ Trigger: TTGGTTTAAGTAGTGGTCCAACCTATCTAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGGTACACGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR-3UTR CAA 90 bp | CCAAACGTGGGTGTATCATGTACTTTCTCACAGAGGACTCAATACAGTCAGTATCATCCTGGAGATGACTaGGCTCAAGAAAGCGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PNVGVSCTFSQRTQYSQYHPGDD*AQESGA Trigger: AGCCCCGCTTTCTTGAGCCAAGTCATCTCCAGGATG...ATACTGACTGTATTGAGTCCTCTGTGAGAAAGTACATGATACACCCACGTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCTCGTTTAAAACAAATGGCAAAGCAGGCCATGGTTGCTCCACCAGCTGTAGAAAAGGAGGTGGGTaGATAAAGTCCCAAGCACCG | + |
|
Preference number: 3 (lower is better) Translates to: KFSFKTNGKAGHGCSTSCRKGGG*IKSQAP Trigger: CGGTGCTTGGGACTTTATCAACCCACCTCCTTTTCT...ACAGCTGGTGGAGCAACCATGGCCTGCTTTGCCATTTGTTTTAAACGAGAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGGACTCAATACAGTCAGTATCCTGTCGACTTGAAGATGTTTGGATTTCTGTATGCAGAAGAAAGAGCTaGAGAGGGGACCTCACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EDSIQSVSCRLEDVWISVCRRKS*RGDLTA Trigger: GGCTGTGAGGTCCCCTCTCAAGCTCTTTCTTCTGCA...TACAGAAATCCAAACATCTTCAAGTCGACAGGATACTGACTGTATTGAGTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR CCA 72 bp | GCCAGTGAAGGTTATAGAGTGAGTTCCAGGCCCACCTaGACTATAAGTAAGACACTGACTCAAAACACCATC | + |
|
Preference number: 3 (lower is better) Translates to: ASEGYRVSSRPT*TISKTLTQNTI Trigger: GATGGTGTTTTGAGTCAGTGTCTTACTTATAGTCCAGGTGGGCCTGGAACTCACTCTATAACCTTCACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR-3UTR CAA 90 bp | ACAAATCCTCTGGCCATGTTTAGACAGGCTTTTGTCCATCCATTACAGAGCAAAAAACCAAATGTCCCATaGTGCTTCCTGCTGTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: TNPLAMFRQAFVHPLQSKKPNVP*CFLLCL Trigger: AAGGCACAGCAGGAAGCACAATGGGACATTTGGTTT...TTTGCTCTGTAATGGATGGACAAAAGCCTGTCTAAACATGGCCAGAGGATTTGT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR TCA 72 bp | TGGACTATAAGTAAGACACTGACTCAAAACACCATCTaGAATGAGGCTGCGAGTGCTGCTCATTTTAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WTISKTLTQNTI*NEAASAAHFRV Trigger: CACTCTAAAATGAGCAGCACTCGCAGCCTCATTTCAGATGGTGTTTTGAGTCAGTGTCTTACTTATAGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR GCA 72 bp | AAGTTTGGAAGCTGTTGTTCTAATAACCATTCAGCCTaGCCTTGTGTGTTCTCAGGAGGTTTCATACAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KFGSCCSNNHSA*PCVFSGGFIQL Trigger: CAACTGTATGAAACCTCCTGAGAACACACAAGGGCAGGCTGAATGGTTATTAGAACAACAGCTTCCAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR GCA 90 bp | CAGGTCATGGCAGCTCAGCTGGCAACAGAGAGGCAAGGAAGGCCCAGGGGTCCTGCTGTAGACATGAAGTaGCCCAGAGAGCCGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVMAAQLATERQGRPRGPAVDMK*PREPGS Trigger: GGAGCCCGGCTCTCTGGGGCACTTCATGTCTACAGC...AGGACCCCTGGGCCTTCCTTGCCTCTCTGTTGCCAGCTGAGCTGCCATGACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR CCA 90 bp | CAGGTCATGGCAGCTCAGCTGGCAACAGAGAGGCAAGGAAGGCCCAGGGGTCCTGTTCGTACATCCGAGTaGCTCCACCCTGGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QVMAAQLATERQGRPRGPVRTSE*LHPGAG Trigger: CCCTGCACCAGGGTGGAGCCACTCGGATGTACGAAC...AGGACCCCTGGGCCTTCCTTGCCTCTCTGTTGCCAGCTGAGCTGCCATGACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR GCA 90 bp | GCACTGTGTGGCTGGGTTGAGGGAGCCCCTGCCTGCTGTGCACAAGGCTCTGGGGTTCGTGGACCAGAATaGCATGTCATCCAGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALCGWVEGAPACCAQGSGVRGPE*HVIQTS Trigger: GGAGGTCTGGATGACATGGCATTCTGGTCCACGAAC...CCCAGAGCCTTGTGCACAGCAGGCAGGGGCTCCCTCAACCCAGCCACACAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR CCA 90 bp | CAGGTCATGGCAGCTCAGCTGGCAACAGAGAGGCAAGGAAGGCCCAGGGGTCCTTCTCCGTGCCCATCCTaGTTGAGGTCAGCTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QVMAAQLATERQGRPRGPSPCPS*LRSAEV Trigger: GACCTCAGCTGACCTCAACCAGGATGGGCACGGAGA...AGGACCCCTGGGCCTTCCTTGCCTCTCTGTTGCCAGCTGAGCTGCCATGACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR TCA 90 bp | CCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGATAGGTTGGACCACTACGTAGGTGAGCTGCCCTaGGCCCACGGAGGGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PKRWPFCWLCSLDRLDHYVGELP*AHGGSA Trigger: GGCGCTCCCTCCGTGGGCTCAGGGCAGCTCACCTAC...GTAGTGGTCCAACCTATCTAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR TCA 90 bp | CTCCACCAGCTGTGCCTCCAGTCCTTGAGAGGCTGCAGCAGGGAGATTACAAAGCTGGTTGAGGTCAGCTaGGGTCATGACCCAGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHQLCLQSLRGCSREITKLVEVS*GHDPAE Trigger: CTCGGCTGGGTCATGACCTCAGCTGACCTCAACCAG...CTTTGTAATCTCCCTGCTGCAGCCTCTCAAGGACTGGAGGCACAGCTGGTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR TCA 90 bp | CTGACCATATTTCTAGGCAGCCTGGCTGTCCCAGGTTTCGCTCCACCGGAGAACGCCACTGTGACCCCGTaGAGGGAGTATCCAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTIFLGSLAVPGFAPPENATVTP*REYPNH Trigger: GTGGTTTGGATACTCCCTTCACGGGGTCACAGTGGC...GTTCTCCGGTGGAGCGAAACCTGGGACAGCCAGGCTGCCTAGAAATATGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR CCA 90 bp | CTGACCATATTTCTAGGCAGCCTGGCTGTCCCAGGTTTCGCTCCACCGGAGAACCCCTCCAGGATCCCATaGGCCTCCTTGTCTAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTIFLGSLAVPGFAPPENPSRIP*ASLSKS Trigger: GGACTTAGACAAGGAGGCCCATGGGATCCTGGAGGG...GTTCTCCGGTGGAGCGAAACCTGGGACAGCCAGGCTGCCTAGAAATATGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR TCA 90 bp | CCAGGTTTCGCTCCACCGGAGAACTACTTTGTCCATCCTGGAGATGACTTGGCTGCAGCCCATCCTGGTTaGAGTCCAGCACGGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGFAPPENYFVHPGDDLAAAHPG*SPARPK Trigger: CTTTGGCCGTGCTGGACTTCAACCAGGATGGGCTGC...AGCCAAGTCATCTCCAGGATGGACAAAGTAGTTCTCCGGTGGAGCGAAACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR TCA 90 bp | CAGCTGTGCCTCCAGTCCTTGAGAGGCTGCAGCAGGGAGATTACAAAGAGTTTGAGCGTGCCATCCTGCTaGCATTCTTCCAGGTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLCLQSLRGCSREITKSLSVPSC*HSSRSG Trigger: GCCCGACCTGGAAGAATGTCAGCAGGATGGCACGCT...CAAACTCTTTGTAATCTCCCTGCTGCAGCCTCTCAAGGACTGGAGGCACAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR CCA 90 bp | CCAGGTTTCGCTCCACCGGAGAACTACTTTGTCCATCCTGGAGATGACTTGGCTCGAGTGGCTCCACCCTaGTGCAGGGTCATGGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGFAPPENYFVHPGDDLARVAPP*CRVMVR Trigger: CCTAACCATGACCCTGCACCAGGGTGGAGCCACTCG...AGCCAAGTCATCTCCAGGATGGACAAAGTAGTTCTCCGGTGGAGCGAAACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR TCA 90 bp | CTAATTGCTGTCCGTGTACCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGGTCAGCTGAGGTCATaGCCCAGCCGAGCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIAVRVPKRWPFCWLCSLGQLRS*PSRAWH Trigger: ATGCCAGGCTCGGCTGGGTCATGACCTCAGCTGACC...TAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGGTACACGGACAGCAATTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR CCA 90 bp | CTAATTGCTGTCCGTGTACCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAAGGGTGGCTGTAGCCTaGTGCACCCACCACGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LIAVRVPKRWPFCWLCSLRVAVA*CTHHEV Trigger: GACCTCGTGGTGGGTGCACCAGGCTACAGCCACCCT...TAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGGTACACGGACAGCAATTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR CAA 72 bp | ACCGGCAGCAAACTCAGAGGATGCAGAAGAAAGAGCTaGAGAGGGGACCTCACAGCCTGCTGCTCCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGSKLRGCRRKS*RGDLTACCSYH Trigger: GTGATAGGAGCAGCAGGCTGTGAGGTCCCCTCTCAAGCTCTTTCTTCTGCATCCTCTGAGTTTGCTGCCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR CAA 72 bp | CCCCTGCCTGCTGTGCACAAGGCTCTGGGGTTCGCCTaGCCATTTACATTTGCTAATTGCTGTCCGTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: PLPAVHKALGFA*PFTFANCCPCT Trigger: GGTACACGGACAGCAATTAGCAAATGTAAATGGCAAGGCGAACCCCAGAGCCTTGTGCACAGCAGGCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR CAA 72 bp | AGGCCATGGTTGCTCCACCAGCTGTGCCTCCAGTCCTaGAGAGGCTGCAGCAGGGAGATTACAAAGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPWLLHQLCLQS*RGCSREITKSL Trigger: CAAACTCTTTGTAATCTCCCTGCTGCAGCCTCTCAAGGACTGGAGGCACAGCTGGTGGAGCAACCATGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR TCA 90 bp | CTGACCATATTTCTAGGCAGCCTGGCTGTCCCAGGTTTCGCTCCACCGGAGAACCTAGCAGTCCGGAAGTaGCATCTGTTATCCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTIFLGSLAVPGFAPPENLAVRK*HLLSSV Trigger: CACTGAGGATAACAGATGTCACTTCCGGACTGCTAG...GTTCTCCGGTGGAGCGAAACCTGGGACAGCCAGGCTGCCTAGAAATATGGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR GCA 90 bp | CCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGATAGGTTGGACCACTACGCCACAATTCCTCTCTaGTTCCCTCCACCTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PKRWPFCWLCSLDRLDHYATIPL*FPPPGA Trigger: CGCACCAGGTGGAGGGAAGCAGAGAGGAATTGTGGC...GTAGTGGTCCAACCTATCTAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR GCA 90 bp | GTCCTTGAGAGGCTGCAGCAGGGAGATTACAAAGAGTTTGAGGCCAGCCTGGGCGAGTCATCCAGGACTTaGATTTGCCGGTCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLERLQQGDYKEFEASLGESSRT*ICRSCH Trigger: GTGACATGACCGGCAAATGCAAGTCCTGGATGACTC...GCCCAGGCTGGCCTCAAACTCTTTGTAATCTCCCTGCTGCAGCCTCTCAAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR CCA 90 bp | CCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGATAGGTTGGACCACTACAAGCGACCTGAAGGCTaGAAGCCCTCCAGGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PKRWPFCWLCSLDRLDHYKRPEG*KPSRIP Trigger: TGGGATCCTGGAGGGCTTCCAGCCTTCAGGTCGCTT...GTAGTGGTCCAACCTATCTAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR CAA 72 bp | TGGCTGTCCCAGGTTTCGCTCCACCGGAGAACTACTTaGTCCATCCTGGAGATGACTTGGCTCAAGAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: WLSQVSLHRRTT*SILEMTWLKKA Trigger: CGCTTTCTTGAGCCAAGTCATCTCCAGGATGGACAAAGTAGTTCTCCGGTGGAGCGAAACCTGGGACAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR TCA 90 bp | CCAGGTTTCGCTCCACCGGAGAACTACTTTGTCCATCCTGGAGATGACTTGGCTCGAGCTCCCAAACCTTaGACTTGCCTCTGGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGFAPPENYFVHPGDDLARAPKP*TCLWRS Trigger: ACTTCTCCAGAGGCAAGTTCAAGGTTTGGGAGCTCG...AGCCAAGTCATCTCCAGGATGGACAAAGTAGTTCTCCGGTGGAGCGAAACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR CCA 90 bp | ATTACAGAGCAAAATCACTGGCACTGTGTGGCTGGGTTGAGGGAGCCCCTGCCTACGTCAGCGACCATGTaGGAGGTGATTCCAAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ITEQNHWHCVAGLREPLPTSATM*EVIPNK Trigger: CTTGTTTGGAATCACCTCCCACATGGTCGCTGACGT...AGGCAGGGGCTCCCTCAACCCAGCCACACAGTGCCAGTGATTTTGCTCTGTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR CAA 72 bp | TCCTTGAGAGGCTGCAGCAGGGAGATTACAAAGAGTTaGAGGCCAGCCTGGGCTACAGATTACGTTCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRGCSREITKS*RPAWATDYVLG Trigger: GCCTAGAACGTAATCTGTAGCCCAGGCTGGCCTCAAACTCTTTGTAATCTCCCTGCTGCAGCCTCTCAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR TCA 90 bp | TTATTTGGGCTCACAGTTTTCGGCCATGTCAGCGCCAGGGTGCTTGGCCCTGTTAGAAATGGAGTCCAGTaGGTCCTCTCAGAAACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFGLTVFGHVSARVLGPVRNGVQ*VLSETS Trigger: TGACGTTTCTGAGAGGACTCACTGGACTCCATTTCT...AACAGGGCCAAGCACCCTGGCGCTGACATGGCCGAAAACTGTGAGCCCAAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR CCA 90 bp | ATTACAGAGCAAAATCACTGGCACTGTGTGGCTGGGTTGAGGGAGCCCCTGCCTAGGAGGCAGAGGGGCTaGAGACATGATTCAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ITEQNHWHCVAGLREPLPRRQRG*RHDSDF Trigger: AAAATCTGAATCATGTCTCCAGCCCCTCTGCCTCCT...AGGCAGGGGCTCCCTCAACCCAGCCACACAGTGCCAGTGATTTTGCTCTGTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR CCA 90 bp | CTCCACCAGCTGTGCCTCCAGTCCTTGAGAGGCTGCAGCAGGGAGATTACAAAGATCTGTTATCCTCAGTaGGGCAGCCATGATGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHQLCLQSLRGCSREITKICYPQ*GSHDDF Trigger: GAAATCATCATGGCTGCCCCACTGAGGATAACAGAT...CTTTGTAATCTCCCTGCTGCAGCCTCTCAAGGACTGGAGGCACAGCTGGTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR GCA 90 bp | AGACAGGCTTTTGTCCATCCATTACAGAGCAAAATCACTGGCACTGTGTGGCTGGGTTCTCAGGCAGGTTaGAGTCACTGGTCCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQAFVHPLQSKITGTVWLGSQAG*SHWSRS Trigger: AGAACGGGACCAGTGACTGCAACCTGCCTGAGAACC...CAGCCACACAGTGCCAGTGATTTTGCTCTGTAATGGATGGACAAAAGCCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR CCA 90 bp | CAGCTGTGCCTCCAGTCCTTGAGAGGCTGCAGCAGGGAGATTACAAAGAGTTTGCTGCTCCACCAGAAATaGGGACTTTGTAGAGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: QLCLQSLRGCSREITKSLLLHQK*GLCRVR Trigger: ACGTACTCTACAAAGTCCCCATTTCTGGTGGAGCAG...CAAACTCTTTGTAATCTCCCTGCTGCAGCCTCTCAAGGACTGGAGGCACAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| 3UTR CAA 72 bp | TGCACAAGGCTCTGGGGTTCGCCTTGCCATTTACATTaGCTAATTGCTGTCCGTGTACCAAAACGATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CTRLWGSPCHLH*LIAVRVPKRWP Trigger: GGGCCATCGTTTTGGTACACGGACAGCAATTAGCAAATGTAAATGGCAAGGCGAACCCCAGAGCCTTGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR GCA 90 bp | GAGGACTCAATACAGTCAGTATCCTGTCGACTTGAAGATGTTTGGATTTCTGTAGTGGCTGTAGCCTGGTaGACCCACCACGAGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EDSIQSVSCRLEDVWISVVAVAW*THHEVS Trigger: GGAGACCTCGTGGTGGGTGCACCAGGCTACAGCCAC...TACAGAAATCCAAACATCTTCAAGTCGACAGGATACTGACTGTATTGAGTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
||
| CDS-3UTR CCA 90 bp | CCAGGTTTCGCTCCACCGGAGAACTACTTTGTCCATCCTGGAGATGACTTGGCTGGTGAGAATAAAAGGTaGCCACAATTCCTCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGFAPPENYFVHPGDDLAGENKR*PQFLSA Trigger: AGCAGAGAGGAATTGTGGCCACCTTTTATTCTCACC...AGCCAAGTCATCTCCAGGATGGACAAAGTAGTTCTCCGGTGGAGCGAAACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CCA 90 bp | AGACAGGCTTTTGTCCATCCATTACAGAGCAAAATCACTGGCACTGTGTGGCTGCTTCTCCTCCGGACATaGAGTCATCCAGGACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQAFVHPLQSKITGTVWLLLLRT*SHPGLA Trigger: TGCAAGTCCTGGATGACTCCATGTCCGGAGGAGAAG...CAGCCACACAGTGCCAGTGATTTTGCTCTGTAATGGATGGACAAAAGCCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR TCA 90 bp | ATTACAGAGCAAAATCACTGGCACTGTGTGGCTGGGTTGAGGGAGCCCCTGCCTCTCTCAGAAACGTCATaGTATTTTCCTCTTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITEQNHWHCVAGLREPLPLSETS*YFPLLQ Trigger: CTGCAAAAGAGGAAAATATCATGACGTTTCTGAGAG...AGGCAGGGGCTCCCTCAACCCAGCCACACAGTGCCAGTGATTTTGCTCTGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR GCA 90 bp | CTAATTGCTGTCCGTGTACCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGATTTTTCTGAGAGCTaGCAGCAAGCATCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIAVRVPKRWPFCWLCSLDFSES*QQASAS Trigger: TGAGGCTGATGCTTGCTGGCAGCTCTCAGAAAAATC...TAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGGTACACGGACAGCAATTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR GCA 90 bp | CCAAACGTGGGTGTATCATGTACTTTCTCACAGAGGACTCAATACAGTCAGTATCCGGCCATCTCCGTCTaGATCTGTTGCCAAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PNVGVSCTFSQRTQYSQYPAISV*ICCQEG Trigger: ACCCTCTTGGCAACAGATGCAGACGGAGATGGCCGG...ATACTGACTGTATTGAGTCCTCTGTGAGAAAGTACATGATACACCCACGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CCA 90 bp | CCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGATAGGTTGGACCACTACACGTGGAATAGAGCTTaGAAACAGCAAACATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKRWPFCWLCSLDRLDHYTWNRA*KQQTSP Trigger: GGGAGATGTTTGCTGTTTCCAAGCTCTATTCCACGT...GTAGTGGTCCAACCTATCTAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CCA 90 bp | ACAAATCCTCTGGCCATGTTTAGACAGGCTTTTGTCCATCCATTACAGAGCAAACTGCTTCCCTCCACCTaGTGCGAAAGGGGAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TNPLAMFRQAFVHPLQSKLLPST*CERGAD Trigger: ATCAGCTCCCCTTTCGCACCAGGTGGAGGGAAGCAG...TTTGCTCTGTAATGGATGGACAAAAGCCTGTCTAAACATGGCCAGAGGATTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CCA 90 bp | CCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGATAGGTTGGACCACTACCTTTGTCATTCCGTCTaGGGTGAGAATAAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKRWPFCWLCSLDRLDHYLCHSV*GENKRW Trigger: CCACCTTTTATTCTCACCCCAGACGGAATGACAAAG...GTAGTGGTCCAACCTATCTAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CAA 72 bp | TCCCCAGGAGAAAATGTATACAGCCAGCTAATGTGTTaGCCGACCTCTCAGAAGTTAGCAGATGGGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGENVYSQLMC*PTSQKLADGLV Trigger: GACAAGCCCATCTGCTAACTTCTGAGAGGTCGGCAAACACATTAGCTGGCTGTATACATTTTCTCCTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR TCA 90 bp | CCAAACGTGGGTGTATCATGTACTTTCTCACAGAGGACTCAATACAGTCAGTATTGCCATCACAGGAGATaGACAGGGGGTTCTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PNVGVSCTFSQRTQYSQYCHHRR*TGGSQA Trigger: TGCCTGAGAACCCCCTGTTCATCTCCTGTGATGGCA...ATACTGACTGTATTGAGTCCTCTGTGAGAAAGTACATGATACACCCACGTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CCA 90 bp | CATTGTGCTTCCTGCTGTGCCTTAGGAGTCAGAGTGTGTACTCACAGCAGCTGTTTCCTCTCCAGAGTCTaGTACATAAAGGTGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HCASCCALGVRVCTHSSCFLSRV*YIKVTD Trigger: ATCTGTCACCTTTATGTACCAGACTCTGGAGAGGAA...ACAGCTGCTGTGAGTACACACTCTGACTCCTAAGGCACAGCAGGAAGCACAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CCA 90 bp | CTCCCCAGGAGAAAATGTATACAGCCAGCTAATGTGTTTGCCGACCTCTCAGAATCTTGGTTCTTTTTGTaGCTTGAGCGTGCCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPRRKCIQPANVFADLSESWFFL*LERAIL Trigger: CAGGATGGCACGCTCAAGCCACAAAAAGAACCAAGA...TTCTGAGAGGTCGGCAAACACATTAGCTGGCTGTATACATTTTCTCCTGGGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CCA 90 bp | CCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTAGATAGGTTGGACCACTACAGGCTCTTTTCCTCTTaGTTCTTTTTGTGGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PKRWPFCWLCSLDRLDHYRLFSS*FFLWLE Trigger: CTCAAGCCACAAAAAGAACCAAGAGGAAAAGAGCCT...GTAGTGGTCCAACCTATCTAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CCA 90 bp | CAGCAGCTGTGCCTTCCTTCCTTAGTGTCTGTAGTTGTACTTGACTGTTTAGAACCAACCAGCAGGACTTaGGTTAGGGTCCCATTCACT | + |
|
Preference number: 4 (lower is better) Translates to: QQLCLPSLVSVVVLDCLEPTSRT*VRVPFT Trigger: AGTGAATGGGACCCTAACCCAAGTCCTGCTGGTTGG...TTCTAAACAGTCAAGTACAACTACAGACACTAAGGAAGGAAGGCACAGCTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR TCA 90 bp | AGACAGGCTTTTGTCCATCCATTACAGAGCAAAATCACTGGCACTGTGTGGCTGATTTTTCTGCACTTTTaGGCCACTGAGGGTGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RQAFVHPLQSKITGTVWLIFLHF*ATEGVV Trigger: AACCACACCCTCAGTGGCTCAAAAGTGCAGAAAAAT...CAGCCACACAGTGCCAGTGATTTTGCTCTGTAATGGATGGACAAAAGCCTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR TCA 90 bp | GTGTATCATGTACTTTCTCACAGAGGACTCAATACAGTCAGTATCCTGTCGACTTTCTGTTTGCCACTGTaGCCCCGTGAAGGGAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: VYHVLSHRGLNTVSILSTFCLPL*PREGSI Trigger: GATACTCCCTTCACGGGGTCACAGTGGCAAACAGAA...AGTCGACAGGATACTGACTGTATTGAGTCCTCTGTGAGAAAGTACATGATACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR GCA 90 bp | TCTGTAAGCTTTAAGTTTTCTTTATCTGATGCCTGTTACATGCTATGCTCAGGCACCACGAGGTCTCCGTaGCCATCCTGGTTGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSFKFSLSDACYMLCSGTTRSP*PSWLRS Trigger: TGACCTCAACCAGGATGGGCACGGAGACCTCGTGGT...GCCTGAGCATAGCATGTAACAGGCATCAGATAAAGAAAACTTAAAGCTTACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CAA 72 bp | TGCACGGGAAGAGACAGATCGCTCATACCTGTAAGTTaGGAAGCTGTTGTTCTAATAACCATTCAGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CTGRDRSLIPVS*EAVVLITIQPA Trigger: GGCAGGCTGAATGGTTATTAGAACAACAGCTTCCAAACTTACAGGTATGAGCGATCTGTCTCTTCCCGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR GCA 90 bp | ACAAATCCTCTGGCCATGTTTAGACAGGCTTTTGTCCATCCATTACAGAGCAAATCCAGGACTTGCATTTaGCGGTCATGTCACCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TNPLAMFRQAFVHPLQSKSRTCI*RSCHLR Trigger: CCTTAGGTGACATGACCGGCAAATGCAAGTCCTGGA...TTTGCTCTGTAATGGATGGACAAAAGCCTGTCTAAACATGGCCAGAGGATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CAA 72 bp | CCCAAGATAAACAGCTTAAAAAGAGGAAATGTTTATTaGGGCTCACAGTTTTCGGCCATGTCAGCGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKINSLKRGNVY*GSQFSAMSAPG Trigger: CCCTGGCGCTGACATGGCCGAAAACTGTGAGCCCAAATAAACATTTCCTCTTTTTAAGCTGTTTATCTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CCA 90 bp | GAGGACTCAATACAGTCAGTATCCTGTCGACTTGAAGATGTTTGGATTTCTGTAGCTGGCGTTAAGAAATaGAGTCCAGTGAGTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EDSIQSVSCRLEDVWISVAGVKK*SPVSPL Trigger: GAGAGGACTCACTGGACTCCATTTCTTAACGCCAGC...TACAGAAATCCAAACATCTTCAAGTCGACAGGATACTGACTGTATTGAGTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CAA 72 bp | GCCTGCCCTTGTGTGTTCTCAGGAGGTTTCATACAGTaGTGTGCTAGAACATTACAATACCAAAAAGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACPCVFSGGFIQ*CARTLQYQKVC Trigger: GCACACTTTTTGGTATTGTAATGTTCTAGCACACAACTGTATGAAACCTCCTGAGAACACACAAGGGCAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR TCA 90 bp | GTGTATCATGTACTTTCTCACAGAGGACTCAATACAGTCAGTATCCTGTCGACTTTAATGCGTCCATCTTaGAGCCGAAGAAACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VYHVLSHRGLNTVSILSTLMRPS*SRRNSR Trigger: TCTGGAGTTTCTTCGGCTTCAAGATGGACGCATTAA...AGTCGACAGGATACTGACTGTATTGAGTCCTCTGTGAGAAAGTACATGATACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR TCA 90 bp | CAGCAGCTGTGCCTTCCTTCCTTAGTGTCTGTAGTTGTACTTGACTGTTTAGAACACGTACCAGCGCCGTaGGAGGTAATTAAAATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QQLCLPSLVSVVVLDCLEHVPAP*EVIKIK Trigger: TTTAATTTTAATTACCTCTCACGGCGCTGGTACGTG...TTCTAAACAGTCAAGTACAACTACAGACACTAAGGAAGGAAGGCACAGCTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| 3UTR CAA 72 bp | AAAAGACAAATCCTCTGGCCATGTTTAGACAGGCTTTaGTCCATCCATTACAGAGCAAAATCACTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KRQILWPCLDRL*SIHYRAKSLAL Trigger: CAGTGCCAGTGATTTTGCTCTGTAATGGATGGACAAAAGCCTGTCTAAACATGGCCAGAGGATTTGTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 90 bp | GTACACCCGCCCAATCTGGAAGCGGCCAGGGTGGCTGTAGCCTGGTaGACCCACCACGAGGTCTCCGTGCCCATCCTGGTTGAGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VHPPNLEAARVAVAW*THHEVSVPILVEVS Trigger: GCTGACCTCAACCAGGATGGGCACGGAGACCTCGTGGTGGGTGCACCAGGCTACAGCCACCCTGGCCGCTTCCAGATTGGGCGGGTGTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 90 bp | GATGTACACCCGCCCAATCTGGAAGCGGCCAGGGTGGCTGTAGCCTaGTGCACCCACCACGAGGTCTCCGTGCCCATCCTGGTTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DVHPPNLEAARVAVA*CTHHEVSVPILVEV Trigger: GACCTCAACCAGGATGGGCACGGAGACCTCGTGGTGGGTGCACCAGGCTACAGCCACCCTGGCCGCTTCCAGATTGGGCGGGTGTACATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CAA 90 bp | GCACTGTGTGGCTGGGTTGAGGGAGCCCCTGCCTGCTGTGCACAAGGCTCTGGGCCGTGCCCATCCTGGTaGAGGTCAGCTGAGGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: ALCGWVEGAPACCAQGSGPCPSW*RSAEVM Trigger: CATGACCTCAGCTGACCTCAACCAGGATGGGCACGG...CCCAGAGCCTTGTGCACAGCAGGCAGGGGCTCCCTCAACCCAGCCACACAGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CAA 90 bp | CAGGTCATGGCAGCTCAGCTGGCAACAGAGAGGCAAGGAAGGCCCAGGGGTCCTGGGTTCTCAGGCAGGTaGCAGTCACTGGTCCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QVMAAQLATERQGRPRGPGFSGR*QSLVPF Trigger: GAACGGGACCAGTGACTGCAACCTGCCTGAGAACCC...AGGACCCCTGGGCCTTCCTTGCCTCTCTGTTGCCAGCTGAGCTGCCATGACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS TCA 90 bp | TCCCTTGCTGGGAACCATAGTAGACATACACCGAGCCATTGTAGGTaGGCTGCCCTGAGCCCACGGAGGGAGCGCCCACAGCCAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLAGNHSRHTPSHCR*AALSPRRERPQPGQ Trigger: CTGACCTGGCTGTGGGCGCTCCCTCCGTGGGCTCAGGGCAGCTCACCTACAATGGCTCGGTGTATGTCTACTATGGTTCCCAGCAAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 90 bp | GAGAGCCGGGCTCCCCAAGAACTCCTTCCAGCAGCAACAACCACTTaGTTCCTTCCCTTAGACCGCACGGACACCAGCGAGCTCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ESRAPQELLPAATTT*FLPLDRTDTSELPN Trigger: GTTTGGGAGCTCGCTGGTGTCCGTGCGGTCTAAGGGAAGGAACCAAGTGGTTGTTGCTGCTGGAAGGAGTTCTTGGGGAGCCCGGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 90 bp | TTGAAGTCCAGCACGGCCAAAGCTGAGCCAAAGCGACCTGAAGGCTaGAAGCCCTCCAGGATCCCATGGGCCTCCTTGTCTAAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKSSTAKAEPKRPEG*KPSRIPWASLSKSR Trigger: CCTGGACTTAGACAAGGAGGCCCATGGGATCCTGGAGGGCTTCCAGCCTTCAGGTCGCTTTGGCTCAGCTTTGGCCGTGCTGGACTTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 90 bp | GGAGCTGATGACCAGATCGTGCCGGCCATCTCCGTCTGCATCTGTTaGCAAGAGGGTCCAGCCCAAGTTACAGTAGGTGTCCTTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GADDQIVPAISVCIC*QEGPAQVTVGVLAG Trigger: TCCTGCAAGGACACCTACTGTAACTTGGGCTGGACCCTCTTGGCAACAGATGCAGACGGAGATGGCCGGCACGATCTGGTCATCAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 90 bp | TGCGAAAGGGGAGCTGATGACCAGATCGTGCCGGCCATCTCCGTCTaGATCTGTTGCCAAGAGGGTCCAGCCCAAGTTACAGTAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CERGADDQIVPAISV*ICCQEGPAQVTVGV Trigger: GACACCTACTGTAACTTGGGCTGGACCCTCTTGGCAACAGATGCAGACGGAGATGGCCGGCACGATCTGGTCATCAGCTCCCCTTTCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 90 bp | GTGAGAATAAAAGGTGGCCACAATTCCTCTCTGCTTCCCTCCACCTaGTGCGAAAGGGGAGCTGATGACCAGATCGTGCCGGCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRIKGGHNSSLLPST*CERGADDQIVPAIS Trigger: GGAGATGGCCGGCACGATCTGGTCATCAGCTCCCCTTTCGCACCAGGTGGAGGGAAGCAGAGAGGAATTGTGGCCACCTTTTATTCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CAA 90 bp | CCAGGTTTCGCTCCACCGGAGAACTACTTTGTCCATCCTGGAGATGACTTGGCTGGCAGCCCATCCTGGTaGAAGTCCAGCACGGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGFAPPENYFVHPGDDLAGSPSW*KSSTAK Trigger: TTTGGCCGTGCTGGACTTCAACCAGGATGGGCTGCC...AGCCAAGTCATCTCCAGGATGGACAAAGTAGTTCTCCGGTGGAGCGAAACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 90 bp | GACATTCTTCCAGGTCGGGCTCCCAATCAGCAGCAGGCTTCTGTTTaGCACTGTGACCCCGTGAAGGGAGTATCCAAACCACGAGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: DILPGRAPNQQQASV*HCDPVKGVSKPREV Trigger: GACTTCTCGTGGTTTGGATACTCCCTTCACGGGGTCACAGTGGCAAACAGAAGCCTGCTGCTGATTGGGAGCCCGACCTGGAAGAATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 90 bp | AGGAGGCAGAGGGGCTGGAGACATGATTCAGATTTTTCTGAGAGCTaGCAGCAAGCATCAGCCTCAGGTTCCTCTCCAGAGTCTGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: RRQRGWRHDSDFSES*QQASASGSSPESGT Trigger: TGTACCAGACTCTGGAGAGGAACCTGAGGCTGATGCTTGCTGGCAGCTCTCAGAAAAATCTGAATCATGTCTCCAGCCCCTCTGCCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS TCA 90 bp | TCTTTTCCTCTTGGTTCTTTTTGTGGCTTGAGCGTGCCATCCTGCTaGCATTCTTCCAGGTCGGGCTCCCAATCAGCAGCAGGCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SFPLGSFCGLSVPSC*HSSRSGSQSAAGFC Trigger: ACAGAAGCCTGCTGCTGATTGGGAGCCCGACCTGGAAGAATGTCAGCAGGATGGCACGCTCAAGCCACAAAAAGAACCAAGAGGAAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 90 bp | ATAGCTCCCATTGTCCTGAGGAACCCTTGTTCAATACCCAGGCTATaGCAGCTCACGTCAGCGACCATGTGGGAGGTGATTCCAAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: IAPIVLRNPCSIPRL*QLTSATMWEVIPNK Trigger: CTTGTTTGGAATCACCTCCCACATGGTCGCTGACGTGAGCTGGCATAGCCTGGGTATTGAACAAGGGTTCCTCAGGACAATGGGAGCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 90 bp | CCTTGTTCAATACCCAGGCTATGCCAGCTCACGTCAGCGACCATGTaGGAGGTGATTCCAAACAAGAAAGCCACCAACTTCTCTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PCSIPRLCQLTSATM*EVIPNKKATNFSVS Trigger: GGACACAGAGAAGTTGGTGGCTTTCTTGTTTGGAATCACCTCCCACATGGTCGCTGACGTGAGCTGGCATAGCCTGGGTATTGAACAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 90 bp | TGTGTCTTCTCGGGAGCTAGTTCGTACATCCGAGTGGCTCCACCCTaGTGCAGGGTCATGGTTAGGAATGCCATTTTAGACACGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: CVFSGASSYIRVAPP*CRVMVRNAILDTSS Trigger: TGATGACGTGTCTAAAATGGCATTCCTAACCATGACCCTGCACCAGGGTGGAGCCACTCGGATGTACGAACTAGCTCCCGAGAAGACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 90 bp | AAGTCAGTAATTCTTTGTCATTCCGTCTGGGGTGAGAATAAAAGGTaGCCACAATTCCTCTCTGCTTCCCTCCACCTGGTGCGAAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSVILCHSVWGENKR*PQFLSASLHLVRKG Trigger: CCCCTTTCGCACCAGGTGGAGGGAAGCAGAGAGGAATTGTGGCCACCTTTTATTCTCACCCCAGACGGAATGACAAAGAATTACTGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CAA 90 bp | CTAATTGCTGTCCGTGTACCAAAACGATGGCCCTTCTGCTGGCTGTGCTCTTTATGTCCTGAGGAACCCTaGTTCAATACCCAGGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: LIAVRVPKRWPFCWLCSLCPEEP*FNTQAM Trigger: CATAGCCTGGGTATTGAACAAGGGTTCCTCAGGACA...TAAAGAGCACAGCCAGCAGAAGGGCCATCGTTTTGGTACACGGACAGCAATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 90 bp | CTCCAGCATAAAGCTGGTCAAACGGTAAATGTTCGTGGACCAGAATaGCATGTCATCCAGACCTCCGAGGAAATAGTCTTGGAACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQHKAGQTVNVRGPE*HVIQTSEEIVLELL Trigger: GAGCAGTTCCAAGACTATTTCCTCGGAGGTCTGGATGACATGGCATTCTGGTCCACGAACATTTACCGTTTGACCAGCTTTATGCTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 90 bp | GTACATACTGTGCCTTCTCCTCCGGACATGGAGTCATCCAGGACTTaGATTTGCCGGTCATGTCACCTAAGGTGGTATACATGCCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: VHTVPSPPDMESSRT*ICRSCHLRWYTCHY Trigger: ATAATGGCATGTATACCACCTTAGGTGACATGACCGGCAAATGCAAGTCCTGGATGACTCCATGTCCGGAGGAGAAGGCACAGTATGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CAA 90 bp | CTCCCCAGGAGAAAATGTATACAGCCAGCTAATGTGTTTGCCGACCTCTCAGAAATCCAGGACTTGCATTaGCCGGTCATGTCACCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPRRKCIQPANVFADLSEIQDLH*PVMSPK Trigger: CTTAGGTGACATGACCGGCAAATGCAAGTCCTGGAT...TTCTGAGAGGTCGGCAAACACATTAGCTGGCTGTATACATTTTCTCCTGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 90 bp | ACTGTGCCTTCTCCTCCGGACATGGAGTCATCCAGGACTTGCATTTaGCGGTCATGTCACCTAAGGTGGTATACATGCCATTATAAATGT | + |
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Preference number: 5 (lower is better) Translates to: TVPSPPDMESSRTCI*RSCHLRWYTCHYKC Trigger: ACATTTATAATGGCATGTATACCACCTTAGGTGACATGACCGGCAAATGCAAGTCCTGGATGACTCCATGTCCGGAGGAGAAGGCACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 90 bp | TCCAGTCAGCTTCCTCCAAAGTCAGTAATTCTTTGTCATTCCGTCTaGGGTGAGAATAAAAGGTGGCCACAATTCCTCTCTGCTTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: SSQLPPKSVILCHSV*GENKRWPQFLSASL Trigger: GAGGGAAGCAGAGAGGAATTGTGGCCACCTTTTATTCTCACCCCAGACGGAATGACAAAGAATTACTGACTTTGGAGGAAGCTGACTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 90 bp | ATGGAGTCATCCAGGACTTGCATTTGCCGGTCATGTCACCTAAGGTaGTATACATGCCATTATAAATGTACACTCGCCCATCTTCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: MESSRTCICRSCHLR*YTCHYKCTLAHLLP Trigger: GGGGAGAAGATGGGCGAGTGTACATTTATAATGGCATGTATACCACCTTAGGTGACATGACCGGCAAATGCAAGTCCTGGATGACTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CAA 90 bp | ACAAATCCTCTGGCCATGTTTAGACAGGCTTTTGTCCATCCATTACAGAGCAAAAGAAGACAGCCTCCCTaGCTGGGAACCATAGTAGAC | + |
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Preference number: 5 (lower is better) Translates to: TNPLAMFRQAFVHPLQSKRRQPP*LGTIVD Trigger: GTCTACTATGGTTCCCAGCAAGGGAGGCTGTCTTCT...TTTGCTCTGTAATGGATGGACAAAAGCCTGTCTAAACATGGCCAGAGGATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CAA 90 bp | GAGGACTCAATACAGTCAGTATCCTGTCGACTTGAAGATGTTTGGATTTCTGTAGCGAGCTCCCAAACCTaGAACTTGCCTCTGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: EDSIQSVSCRLEDVWISVASSQT*NLPLEK Trigger: CTTCTCCAGAGGCAAGTTCAAGGTTTGGGAGCTCGC...TACAGAAATCCAAACATCTTCAAGTCGACAGGATACTGACTGTATTGAGTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CAA 90 bp | AGACAGGCTTTTGTCCATCCATTACAGAGCAAAATCACTGGCACTGTGTGGCTGCTATTTCTACATGTGTaGAGAGACCACAAGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: RQAFVHPLQSKITGTVWLLFLHV*RDHKMS Trigger: GCTCATCTTGTGGTCTCTCAACACATGTAGAAATAG...CAGCCACACAGTGCCAGTGATTTTGCTCTGTAATGGATGGACAAAAGCCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS-3UTR CAA 90 bp | ACAAATCCTCTGGCCATGTTTAGACAGGCTTTTGTCCATCCATTACAGAGCAAATCCGAGGAAATAGTCTaGGAACTGCTCCACCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: TNPLAMFRQAFVHPLQSKSEEIV*ELLHQK Trigger: TTTCTGGTGGAGCAGTTCCAAGACTATTTCCTCGGA...TTTGCTCTGTAATGGATGGACAAAAGCCTGTCTAAACATGGCCAGAGGATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS TCA 90 bp | ATCATAAATTCTCAGAAGATCCCTGACGGGCACGTACCAGCGCCGTaGGAGGTAATTAAAATTAAATTCAAACTGGCTCAACACATCTCC | + |
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Preference number: 5 (lower is better) Translates to: IINSQKIPDGHVPAP*EVIKIKFKLAQHIS Trigger: GGAGATGTGTTGAGCCAGTTTGAATTTAATTTTAATTACCTCTCACGGCGCTGGTACGTGCCCGTCAGGGATCTTCTGAGAATTTATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 90 bp | CAGAGGGTAGTTCTCTCGAATATAATGGATGCTGGCGTTAAGAAATaGAGTCCAGTGAGTCCTCTCAGAAACGTCATGATATTTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: QRVVLSNIMDAGVKK*SPVSPLRNVMIFSS Trigger: AGAGGAAAATATCATGACGTTTCTGAGAGGACTCACTGGACTCCATTTCTTAACGCCAGCATCCATTATATTCGAGAGAACTACCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 72 bp | CCGCCCAATCTGGAAGCGGCCAGGGTGGCTGTAGCCTaGTGCACCCACCACGAGGTCTCCGTGCCCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: PPNLEAARVAVA*CTHHEVSVPIL Trigger: CAGGATGGGCACGGAGACCTCGTGGTGGGTGCACCAGGCTACAGCCACCCTGGCCGCTTCCAGATTGGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 72 bp | CCCAATCTGGAAGCGGCCAGGGTGGCTGTAGCCTGGTaGACCCACCACGAGGTCTCCGTGCCCATCCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: PNLEAARVAVAW*THHEVSVPILV Trigger: AACCAGGATGGGCACGGAGACCTCGTGGTGGGTGCACCAGGCTACAGCCACCCTGGCCGCTTCCAGATTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 72 bp | CCTGGTGCACCCACCACGAGGTCTCCGTGCCCATCCTaGTTGAGGTCAGCTGAGGTCATGACCCAGCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: PGAPTTRSPCPS*LRSAEVMTQPS Trigger: GCTCGGCTGGGTCATGACCTCAGCTGACCTCAACCAGGATGGGCACGGAGACCTCGTGGTGGGTGCACCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CAA 72 bp | GGTGCACCCACCACGAGGTCTCCGTGCCCATCCTGGTaGAGGTCAGCTGAGGTCATGACCCAGCCGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GAPTTRSPCPSW*RSAEVMTQPSL Trigger: CAGGCTCGGCTGGGTCATGACCTCAGCTGACCTCAACCAGGATGGGCACGGAGACCTCGTGGTGGGTGCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS TCA 72 bp | CACGAGGTCTCCGTGCCCATCCTGGTTGAGGTCAGCTaGGGTCATGACCCAGCCGAGCCTGGCATAGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: HEVSVPILVEVS*GHDPAEPGIGD Trigger: GTCCCCTATGCCAGGCTCGGCTGGGTCATGACCTCAGCTGACCTCAACCAGGATGGGCACGGAGACCTCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CAA 72 bp | GAAGGCTGGAAGCCCTCCAGGATCCCATGGGCCTCCTaGTCTAAGTCCAGGTCGATGGGAGGCAGGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: EGWKPSRIPWAS*SKSRSMGGRPR Trigger: TCTGGGCCTGCCTCCCATCGACCTGGACTTAGACAAGGAGGCCCATGGGATCCTGGAGGGCTTCCAGCCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CAA 90 bp | AAGCGACCTGAAGGCTGGAAGCCCTCCAGGATCCCATGGGCCTCCTaGTCTAAGTCCAGGTCGATGGGAGGCAGGCCCAGATCGTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: KRPEGWKPSRIPWAS*SKSRSMGGRPRSLP Trigger: TGGCAACGATCTGGGCCTGCCTCCCATCGACCTGGACTTAGACAAGGAGGCCCATGGGATCCTGGAGGGCTTCCAGCCTTCAGGTCGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS TCA 72 bp | GGGAACCATAGTAGACATACACCGAGCCATTGTAGGTaGGCTGCCCTGAGCCCACGGAGGGAGCGCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: GNHSRHTPSHCR*AALSPRRERPQ Trigger: CTGTGGGCGCTCCCTCCGTGGGCTCAGGGCAGCTCACCTACAATGGCTCGGTGTATGTCTACTATGGTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 72 bp | AAGCGACCTGAAGGCTGGAAGCCCTCCAGGATCCCATaGGCCTCCTTGTCTAAGTCCAGGTCGATGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: KRPEGWKPSRIP*ASLSKSRSMGG Trigger: GCCTCCCATCGACCTGGACTTAGACAAGGAGGCCCATGGGATCCTGGAGGGCTTCCAGCCTTCAGGTCGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CAA 90 bp | AGAGAGCCGGGCTCCCCAAGAACTCCTTCCAGCAGCAACAACCACTaGGTTCCTTCCCTTAGACCGCACGGACACCAGCGAGCTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: REPGSPRTPSSSNNH*VPSLRPHGHQRAPK Trigger: TTTGGGAGCTCGCTGGTGTCCGTGCGGTCTAAGGGAAGGAACCAAGTGGTTGTTGCTGCTGGAAGGAGTTCTTGGGGAGCCCGGCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 72 bp | GACCAGATCGTGCCGGCCATCTCCGTCTGCATCTGTTaGCAAGAGGGTCCAGCCCAAGTTACAGTAGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: DQIVPAISVCIC*QEGPAQVTVGV Trigger: GACACCTACTGTAACTTGGGCTGGACCCTCTTGGCAACAGATGCAGACGGAGATGGCCGGCACGATCTGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 72 bp | GGAGCTGATGACCAGATCGTGCCGGCCATCTCCGTCTaGATCTGTTGCCAAGAGGGTCCAGCCCAAGTTACA | + |
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Preference number: 6 (lower is better) Translates to: GADDQIVPAISV*ICCQEGPAQVT Trigger: TGTAACTTGGGCTGGACCCTCTTGGCAACAGATGCAGACGGAGATGGCCGGCACGATCTGGTCATCAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 72 bp | AAAGGTGGCCACAATTCCTCTCTGCTTCCCTCCACCTaGTGCGAAAGGGGAGCTGATGACCAGATCGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: KGGHNSSLLPST*CERGADDQIVP Trigger: CGGCACGATCTGGTCATCAGCTCCCCTTTCGCACCAGGTGGAGGGAAGCAGAGAGGAATTGTGGCCACCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 72 bp | GCTCCCCAAGAACTCCTTCCAGCAGCAACAACCACTTaGTTCCTTCCCTTAGACCGCACGGACACCAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: APQELLPAATTT*FLPLDRTDTSE Trigger: CTCGCTGGTGTCCGTGCGGTCTAAGGGAAGGAACCAAGTGGTTGTTGCTGCTGGAAGGAGTTCTTGGGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CAA 72 bp | GGCTCCCCAAGAACTCCTTCCAGCAGCAACAACCACTaGGTTCCTTCCCTTAGACCGCACGGACACCAGCGA | + |
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Preference number: 6 (lower is better) Translates to: GSPRTPSSSNNH*VPSLRPHGHQR Trigger: TCGCTGGTGTCCGTGCGGTCTAAGGGAAGGAACCAAGTGGTTGTTGCTGCTGGAAGGAGTTCTTGGGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 72 bp | CCAGCAAGCATCAGCCTCAGGTTCCTCTCCAGAGTCTaGTACATAAAGGTGACAGATTCCGGGGCCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PASISLRFLSRV*YIKVTDSGAQE Trigger: CTCCTGGGCCCCGGAATCTGTCACCTTTATGTACCAGACTCTGGAGAGGAACCTGAGGCTGATGCTTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CAA 90 bp | TGGTTCCTGCCATCACAGGAGATGAACAGGGGGTTCTCAGGCAGGTaGCAGTCACTGGTCCCGTTCTCCAGCATAAAGCTGGTCAAACGG | + |
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Preference number: 6 (lower is better) Translates to: WFLPSQEMNRGFSGR*QSLVPFSSIKLVKR Trigger: CCGTTTGACCAGCTTTATGCTGGAGAACGGGACCAGTGACTGCAACCTGCCTGAGAACCCCCTGTTCATCTCCTGTGATGGCAGGAACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CAA 72 bp | CCATCACAGGAGATGAACAGGGGGTTCTCAGGCAGGTaGCAGTCACTGGTCCCGTTCTCCAGCATAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PSQEMNRGFSGR*QSLVPFSSIKL Trigger: CAGCTTTATGCTGGAGAACGGGACCAGTGACTGCAACCTGCCTGAGAACCCCCTGTTCATCTCCTGTGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 72 bp | GGAGCTAGTTCGTACATCCGAGTGGCTCCACCCTGGTaGAGGGTCATGGTTAGGAATGCCATTTTAGACACG | + |
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Preference number: 6 (lower is better) Translates to: GASSYIRVAPPW*RVMVRNAILDT Trigger: CGTGTCTAAAATGGCATTCCTAACCATGACCCTGCACCAGGGTGGAGCCACTCGGATGTACGAACTAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 72 bp | TCGGGAGCTAGTTCGTACATCCGAGTGGCTCCACCCTaGTGCAGGGTCATGGTTAGGAATGCCATTTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: SGASSYIRVAPP*CRVMVRNAILD Trigger: GTCTAAAATGGCATTCCTAACCATGACCCTGCACCAGGGTGGAGCCACTCGGATGTACGAACTAGCTCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 72 bp | ATTGTCCTGAGGAACCCTTGTTCAATACCCAGGCTATaGCAGCTCACGTCAGCGACCATGTGGGAGGTGATT | + |
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Preference number: 6 (lower is better) Translates to: IVLRNPCSIPRL*QLTSATMWEVI Trigger: AATCACCTCCCACATGGTCGCTGACGTGAGCTGGCATAGCCTGGGTATTGAACAAGGGTTCCTCAGGACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 72 bp | ATACCCAGGCTATGCCAGCTCACGTCAGCGACCATGTaGGAGGTGATTCCAAACAAGAAAGCCACCAACTTC | + |
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Preference number: 6 (lower is better) Translates to: IPRLCQLTSATM*EVIPNKKATNF Trigger: GAAGTTGGTGGCTTTCTTGTTTGGAATCACCTCCCACATGGTCGCTGACGTGAGCTGGCATAGCCTGGGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CAA 72 bp | TGTGCCTTCTCCTCCGGACATGGAGTCATCCAGGACTaGCATTTGCCGGTCATGTCACCTAAGGTGGTATAC | + |
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Preference number: 6 (lower is better) Translates to: CAFSSGHGVIQD*HLPVMSPKVVY Trigger: GTATACCACCTTAGGTGACATGACCGGCAAATGCAAGTCCTGGATGACTCCATGTCCGGAGGAGAAGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 72 bp | TCTCCTCCGGACATGGAGTCATCCAGGACTTGCATTTaGCGGTCATGTCACCTAAGGTGGTATACATGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SPPDMESSRTCI*RSCHLRWYTCH Trigger: ATGGCATGTATACCACCTTAGGTGACATGACCGGCAAATGCAAGTCCTGGATGACTCCATGTCCGGAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CAA 72 bp | TTCTCCTCCGGACATGGAGTCATCCAGGACTTGCATTaGCCGGTCATGTCACCTAAGGTGGTATACATGCCA | + |
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Preference number: 6 (lower is better) Translates to: FSSGHGVIQDLH*PVMSPKVVYMP Trigger: TGGCATGTATACCACCTTAGGTGACATGACCGGCAAATGCAAGTCCTGGATGACTCCATGTCCGGAGGAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 72 bp | ATTCTTTGTCATTCCGTCTGGGGTGAGAATAAAAGGTaGCCACAATTCCTCTCTGCTTCCCTCCACCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ILCHSVWGENKR*PQFLSASLHLV Trigger: CACCAGGTGGAGGGAAGCAGAGAGGAATTGTGGCCACCTTTTATTCTCACCCCAGACGGAATGACAAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CAA 72 bp | GTAAAAATCGATAGCTCCCATTGTCCTGAGGAACCCTaGTTCAATACCCAGGCTATGCCAGCTCACGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: VKIDSSHCPEEP*FNTQAMPAHVS Trigger: GCTGACGTGAGCTGGCATAGCCTGGGTATTGAACAAGGGTTCCTCAGGACAATGGGAGCTATCGATTTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CAA 90 bp | GTAAGAGTTGTAAAAATCGATAGCTCCCATTGTCCTGAGGAACCCTaGTTCAATACCCAGGCTATGCCAGCTCACGTCAGCGACCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: VRVVKIDSSHCPEEP*FNTQAMPAHVSDHV Trigger: CACATGGTCGCTGACGTGAGCTGGCATAGCCTGGGTATTGAACAAGGGTTCCTCAGGACAATGGGAGCTATCGATTTTTACAACTCTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CAA 90 bp | AGTACATACTGTGCCTTCTCCTCCGGACATGGAGTCATCCAGGACTaGCATTTGCCGGTCATGTCACCTAAGGTGGTATACATGCCATTA | + |
|
Preference number: 6 (lower is better) Translates to: STYCAFSSGHGVIQD*HLPVMSPKVVYMPL Trigger: TAATGGCATGTATACCACCTTAGGTGACATGACCGGCAAATGCAAGTCCTGGATGACTCCATGTCCGGAGGAGAAGGCACAGTATGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CAA 72 bp | GAATGCCATGTCATCCAGACCTCCGAGGAAATAGTCTaGGAACTGCTCCACCAGAAATGGGGACTTTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: ECHVIQTSEEIV*ELLHQKWGLCR Trigger: TCTACAAAGTCCCCATTTCTGGTGGAGCAGTTCCAAGACTATTTCCTCGGAGGTCTGGATGACATGGCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS GCA 72 bp | AAAGCTGGTCAAACGGTAAATGTTCGTGGACCAGAATaGCATGTCATCCAGACCTCCGAGGAAATAGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KAGQTVNVRGPE*HVIQTSEEIVL Trigger: CAAGACTATTTCCTCGGAGGTCTGGATGACATGGCATTCTGGTCCACGAACATTTACCGTTTGACCAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS TCA 72 bp | TCTCAGAAGATCCCTGACGGGCACGTACCAGCGCCGTaGGAGGTAATTAAAATTAAATTCAAACTGGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SQKIPDGHVPAP*EVIKIKFKLAQ Trigger: TTGAGCCAGTTTGAATTTAATTTTAATTACCTCTCACGGCGCTGGTACGTGCCCGTCAGGGATCTTCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 72 bp | TCCAGGACTTGCATTTGCCGGTCATGTCACCTAAGGTaGTATACATGCCATTATAAATGTACACTCGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SRTCICRSCHLR*YTCHYKCTLAH Trigger: ATGGGCGAGTGTACATTTATAATGGCATGTATACCACCTTAGGTGACATGACCGGCAAATGCAAGTCCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 72 bp | CTTCCTCCAAAGTCAGTAATTCTTTGTCATTCCGTCTaGGGTGAGAATAAAAGGTGGCCACAATTCCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LPPKSVILCHSV*GENKRWPQFLS Trigger: AGAGAGGAATTGTGGCCACCTTTTATTCTCACCCCAGACGGAATGACAAAGAATTACTGACTTTGGAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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| CDS CCA 72 bp | GTTCTCTCGAATATAATGGATGCTGGCGTTAAGAAATaGAGTCCAGTGAGTCCTCTCAGAAACGTCATGATA | + |
|
Preference number: 6 (lower is better) Translates to: VLSNIMDAGVKK*SPVSPLRNVMI Trigger: TATCATGACGTTTCTGAGAGGACTCACTGGACTCCATTTCTTAACGCCAGCATCCATTATATTCGAGAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021773.13 |
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