Pregenerated sensors for GPKOW (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031148Ensembl transcript IDs: ENSMUST00000049896.13, ENSMUST00000154562.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCAACCCGTGCTGTTCATGGGCAGAAGTTCCCCTTTCTCTTCAGTaGATTATCAGCCCAGAGACATTCCTAGAGGTCAAACGTATGTGC | + |
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Preference number: 1 (lower is better) Translates to: ANPCCSWAEVPLSLQ*IISPETFLEVKRMC Trigger: GCACATACGTTTGACCTCTAGGAATGTCTCTGGGCTGATAATGCACTGAAGAGAAAGGGGAACTTCTGCCCATGAACAGCACGGGTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR GCA 90 bp | CGGGGACTAGAAGTGACTAGTCCTTTGGAAACTGGAGCCAACCCGTaGTGTTCATGGGCAGAAGTTCCCCTTTCTCTTCAGTGCATTATC | + |
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Preference number: 1 (lower is better) Translates to: RGLEVTSPLETGANP*CSWAEVPLSLQCII Trigger: GATAATGCACTGAAGAGAAAGGGGAACTTCTGCCCATGAACAGCACGGGTTGGCTCCAGTTTCCAAAGGACTAGTCACTTCTAGTCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR CCA 90 bp | GAAGTGACTAGTCCTTTGGAAACTGGAGCCAACCCGTGCTGTTCATaGGCAGAAGTTCCCCTTTCTCTTCAGTGCATTATCAGCCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: EVTSPLETGANPCCS*AEVPLSLQCIISPE Trigger: CTCTGGGCTGATAATGCACTGAAGAGAAAGGGGAACTTCTGCCCATGAACAGCACGGGTTGGCTCCAGTTTCCAAAGGACTAGTCACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR TCA 90 bp | GCCTCTCAAGTGCTAGATTACAGATATGGGCCACCACACTCTGTGTaGCTCATGTCCTTTTGTCTGTTTATTTTGGCCAGAGAGTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: ASQVLDYRYGPPHSV*LMSFCLFILAREFS Trigger: GCTGAACTCTCTGGCCAAAATAAACAGACAAAAGGACATGAGTCACACAGAGTGTGGTGGCCCATATCTGTAATCTAGCACTTGAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR CCA 90 bp | GAGTTCAGCCCAGTTCTAGCCACATTTACCAGTCTCATTGTGTTCTaGGATGTTTTGATTCTTTTCAGTGTGTGTGGCGGGCTGACAAGT | + |
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Preference number: 1 (lower is better) Translates to: EFSPVLATFTSLIVF*DVLILFSVCGGLTS Trigger: ACTTGTCAGCCCGCCACACACACTGAAAAGAATCAAAACATCCCAGAACACAATGAGACTGGTAAATGTGGCTAGAACTGGGCTGAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR TCA 90 bp | AAAGGGACAATAGGAAGGGAGAAAACCACAGTATCCTTTCCTATTTaGGATAGGTTCTTATTAGGAGTTCTGGCTGGCCTGGGGCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: KGTIGREKTTVSFPI*DRFLLGVLAGLGPV Trigger: AACAGGCCCCAGGCCAGCCAGAACTCCTAATAAGAACCTATCTCAAATAGGAAAGGATACTGTGGTTTTCTCCCTTCCTATTGTCCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR TCA 90 bp | GTTCCAAGGGTAAACTATGTACTGAATGGGGAATTTAACTTGTCCTaGACCCTCAGCAGGGAAATGAGGCTAAGAAATGAAGTGTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: VPRVNYVLNGEFNLS*TLSREMRLRNEVFP Trigger: TGGAAACACTTCATTTCTTAGCCTCATTTCCCTGCTGAGGGTTCAGGACAAGTTAAATTCCCCATTCAGTACATAGTTTACCCTTGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR TCA 90 bp | AGAGCCTTTGAAGACCATTCAAGATCCAAACTCAGGAAGTTGTTCTaGGATGCAACATTGCAGATTCTATTGTGTTTGTCTGGGGACAGA | + |
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Preference number: 1 (lower is better) Translates to: RAFEDHSRSKLRKLF*DATLQILLCLSGDR Trigger: TCTGTCCCCAGACAAACACAATAGAATCTGCAATGTTGCATCTCAGAACAACTTCCTGAGTTTGGATCTTGAATGGTCTTCAAAGGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR TCA 90 bp | ACCCTCAGCAGGGAAATGAGGCTAAGAAATGAAGTGTTTCCACTTTaGTTATCTCAGCTTCCACCCAAATTTACAGTTTACATACTGGTT | + |
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Preference number: 1 (lower is better) Translates to: TLSREMRLRNEVFPL*LSQLPPKFTVYILV Trigger: AACCAGTATGTAAACTGTAAATTTGGGTGGAAGCTGAGATAATCAAAGTGGAAACACTTCATTTCTTAGCCTCATTTCCCTGCTGAGGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR GCA 90 bp | ACCATTCAAGATCCAAACTCAGGAAGTTGTTCTGAGATGCAACATTaGAGATTCTATTGTGTTTGTCTGGGGACAGACTTCATAGATTTC | + |
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Preference number: 1 (lower is better) Translates to: TIQDPNSGSCSEMQH*RFYCVCLGTDFIDF Trigger: GAAATCTATGAAGTCTGTCCCCAGACAAACACAATAGAATCTGCAATGTTGCATCTCAGAACAACTTCCTGAGTTTGGATCTTGAATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR CCA 90 bp | CGGGGACTAGAAGTGACTAGTCCTTTGGAAACTGGAGCCAACCCGTGCTGTTCAGAGTCCTTTACCATATaGGCACAGGAGCTGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RGLEVTSPLETGANPCCSESFTI*AQELER Trigger: CCTCTCCAGCTCCTGTGCCCATATGGTAAAGGACTC...TGAACAGCACGGGTTGGCTCCAGTTTCCAAAGGACTAGTCACTTCTAGTCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR CAA 90 bp | CCAAGTCTGCTCCCATGCAGGGCTCCCATGCAGGGCAGCTTACAATaGTCTGTAACTTCAACTCCTGGGGAACTCAACATTAATGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: PSLLPCRAPMQGSLQ*SVTSTPGELNINGL Trigger: GAGACCATTAATGTTGAGTTCCCCAGGAGTTGAAGTTACAGACAATTGTAAGCTGCCCTGCATGGGAGCCCTGCATGGGAGCAGACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR GCA 90 bp | CTGGGATGTTTTGATTCTTTTCAGTGTGTGTGGCGGGCTGACAAGTTGGGTATTCAAAGGATCCAAGTCTaGTCCCATGCAGGGCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LGCFDSFQCVWRADKLGIQRIQV*SHAGLP Trigger: TGGGAGCCCTGCATGGGAGCAGACTTGGATCCTTTG...AATACCCAACTTGTCAGCCCGCCACACACACTGAAAAGAATCAAAACATCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR GCA 90 bp | ACACTGAGCATTTCCTCGGAAATCAGGAATGAGATGTCCATTGTCCCCTACAGTCCTACTTCTCTCTCCTaGCTGCGAAGCTCAAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: TLSISSEIRNEMSIVPYSPTSLS*LRSSKG Trigger: ACCCTTTGAGCTTCGCAGGCAGGAGAGAGAAGTAGG...ACTGTAGGGGACAATGGACATCTCATTCCTGATTTCCGAGGAAATGCTCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTAGACCAGGCTGGCTTCGCACTCATGGAGATCTGCCTACTTCTCTCTCCGGGTATTTTAACCTGTaGCACAGGCCTAACTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: FCRPGWLRTHGDLPTSLSGYFNL*HRPNLN Trigger: ATTTAAGTTAGGCCTGTGCCACAGGTTAAAATACCC...GGAGAGAGAAGTAGGCAGATCTCCATGAGTGCGAAGCCAGCCTGGTCTACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR GCA 90 bp | CTCAAAGGGTGTGCTACTTCACCTAGCACATTTCCTGCTAGGTTTTTCAGTGAATCGTGGAAATTTTCCTaGCTCAGCCTCTCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LKGCATSPSTFPARFFSESWKFS*LSLSSA Trigger: AGCACTTGAGAGGCTGAGGCAGGAAAATTTCCACGA...TTCACTGAAAAACCTAGCAGGAAATGTGCTAGGTGAAGTAGCACACCCTTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR CCA 90 bp | CTCAAAGGGTGTGCTACTTCACCTAGCACATTTCCTGCTAGGTTTTTCAGTGAAGCTAGATTACAGATATaGGCCACCACACTCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LKGCATSPSTFPARFFSEARLQI*ATTLCV Trigger: CACACAGAGTGTGGTGGCCCATATCTGTAATCTAGC...TTCACTGAAAAACCTAGCAGGAAATGTGCTAGGTGAAGTAGCACACCCTTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR CAA 90 bp | CCAGTTCTAGCCACATTTACCAGTCTCATTGTGTTCTGGGATGTTTaGATTCTTTTCAGTGTGTGTGGCGGGCTGACAAGTTGGGTATTT | + |
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Preference number: 2 (lower is better) Translates to: PVLATFTSLIVFWDV*ILFSVCGGLTSWVF Trigger: AAATACCCAACTTGTCAGCCCGCCACACACACTGAAAAGAATCAAAACATCCCAGAACACAATGAGACTGGTAAATGTGGCTAGAACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAGTGCATTATCAGCCCAGAGACATTCCTAGAGGTCAAACGTATGTGCTAGAAGTGTTTCCACTTTaGTTATCTCAGCTTCCACCC | + |
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Preference number: 2 (lower is better) Translates to: SSVHYQPRDIPRGQTYVLEVFPL*LSQLPP Trigger: GGGTGGAAGCTGAGATAATCAAAGTGGAAACACTTC...TAGCACATACGTTTGACCTCTAGGAATGTCTCTGGGCTGATAATGCACTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR CCA 90 bp | CTCAAAGGGTGTGCTACTTCACCTAGCACATTTCCTGCTAGGTTTTTCAGTGAATTTGTCTGTTTATTTTaGCCAGAGAGTTCAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LKGCATSPSTFPARFFSEFVCLF*PESSAQ Trigger: CTGGGCTGAACTCTCTGGCCAAAATAAACAGACAAA...TTCACTGAAAAACCTAGCAGGAAATGTGCTAGGTGAAGTAGCACACCCTTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR TCA 90 bp | CTCAAAGGGTGTGCTACTTCACCTAGCACATTTCCTGCTAGGTTTTTCAGTGAATGTTCTGGGATGTTTTaGTTCTTTTCAGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LKGCATSPSTFPARFFSECSGMF*FFSVCV Trigger: CACACACACTGAAAAGAATCAAAACATCCCAGAACA...TTCACTGAAAAACCTAGCAGGAAATGTGCTAGGTGAAGTAGCACACCCTTTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR CCA 72 bp | TTCTGGCTGGCCTGGGGCCTGTTTTGTAGACCAGGCTaGCTTCGCACTCATGGAGATCTGCCTACTTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: FWLAWGLFCRPG*LRTHGDLPTSL Trigger: GAGAGAAGTAGGCAGATCTCCATGAGTGCGAAGCCAGCCTGGTCTACAAAACAGGCCCCAGGCCAGCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR GCA 72 bp | TTTGTAGACCAGGCTGGCTTCGCACTCATGGAGATCTaGCTACTTCTCTCTCCTGCCTGCGAAGCTCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: FVDQAGFALMEI*LLLSPACEAQR Trigger: CCTTTGAGCTTCGCAGGCAGGAGAGAGAAGTAGGCAGATCTCCATGAGTGCGAAGCCAGCCTGGTCTACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR GCA 72 bp | CTTCGCACTCATGGAGATCTGCCTACTTCTCTCTCCTaGCTGCGAAGCTCAAAGGGTGTGCTACTTCACCTA | + |
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Preference number: 3 (lower is better) Translates to: LRTHGDLPTSLS*LRSSKGVLLHL Trigger: TAGGTGAAGTAGCACACCCTTTGAGCTTCGCAGGCAGGAGAGAGAAGTAGGCAGATCTCCATGAGTGCGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR GCA 72 bp | CTTACTGTACTTCCAAAGGATCCAAGTCTGCTCCCATaGAGGGCTCCCATGCAGGGCAGCTTACAATTGTCT | + |
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Preference number: 3 (lower is better) Translates to: LTVLPKDPSLLP*RAPMQGSLQLS Trigger: AGACAATTGTAAGCTGCCCTGCATGGGAGCCCTGCATGGGAGCAGACTTGGATCCTTTGGAAGTACAGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR GCA 72 bp | GAAGTGACTAGTCCTTTGGAAACTGGAGCCAACCCGTaGTGTTCATGGGCAGAAGTTCCCCTTTCTCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: EVTSPLETGANP*CSWAEVPLSLQ Trigger: CTGAAGAGAAAGGGGAACTTCTGCCCATGAACAGCACGGGTTGGCTCCAGTTTCCAAAGGACTAGTCACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR CAA 90 bp | CTCAAAGGGTGTGCTACTTCACCTAGCACATTTCCTGCTAGGTTTTTCAGTGAAGTCACATCCCCATCCTaGCATCTCAAAGGAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: LKGCATSPSTFPARFFSEVTSPS*HLKGGQ Trigger: CTGTCCTCCTTTGAGATGCAAGGATGGGGATGTGAC...TTCACTGAAAAACCTAGCAGGAAATGTGCTAGGTGAAGTAGCACACCCTTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR CAA 90 bp | TTTTGTAGACCAGGCTGGCTTCGCACTCATGGAGATCTGCCTACTTCTCTCTCCCAGATTCTATTGTGTTaGTCTGGGGACAGACTTCAT | + |
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Preference number: 3 (lower is better) Translates to: FCRPGWLRTHGDLPTSLSQILLC*SGDRLH Trigger: ATGAAGTCTGTCCCCAGACAAACACAATAGAATCTG...GGAGAGAGAAGTAGGCAGATCTCCATGAGTGCGAAGCCAGCCTGGTCTACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR CAA 90 bp | CGGGGACTAGAAGTGACTAGTCCTTTGGAAACTGGAGCCAACCCGTGCTGTTCATCTCTCTGGAAGCATTaGTATTCACAATCACATACT | + |
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Preference number: 3 (lower is better) Translates to: RGLEVTSPLETGANPCCSSLWKH*YSQSHT Trigger: AGTATGTGATTGTGAATACAAATGCTTCCAGAGAGA...TGAACAGCACGGGTTGGCTCCAGTTTCCAAAGGACTAGTCACTTCTAGTCCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR GCA 72 bp | TGCTGTTCATGGGCAGAAGTTCCCCTTTCTCTTCAGTaGATTATCAGCCCAGAGACATTCCTAGAGGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: CCSWAEVPLSLQ*IISPETFLEVK Trigger: TTTGACCTCTAGGAATGTCTCTGGGCTGATAATGCACTGAAGAGAAAGGGGAACTTCTGCCCATGAACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR CCA 72 bp | TTTTCAGTGAAGCTCCTCAGACTGTCTTGGAACTCGTaGAAATTTTCCTGCCTCAGCCTCTCAAGTGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: FSVKLLRLSWNS*KFSCLSLSSAR Trigger: TCTAGCACTTGAGAGGCTGAGGCAGGAAAATTTCCACGAGTTCCAAGACAGTCTGAGGAGCTTCACTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR CAA 90 bp | TCGGAAATCAGGAATGAGATGTCCATTGTCCCCTACAGTATCAAAGTCTTAGATGAAGTGACTAGTCCTTaGGAAACTGGAGCCAACCCG | + |
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Preference number: 3 (lower is better) Translates to: SEIRNEMSIVPYSIKVLDEVTSP*ETGANP Trigger: CGGGTTGGCTCCAGTTTCCAAAGGACTAGTCACTTC...ATCTAAGACTTTGATACTGTAGGGGACAATGGACATCTCATTCCTGATTTCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR-3UTR CAA 90 bp | CTCAAAGGGTGTGCTACTTCACCTAGCACATTTCCTGCTAGGTTTTTCAGTGAAACATTGCAGATTCTATaGTGTTTGTCTGGGGACAGA | + |
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Preference number: 3 (lower is better) Translates to: LKGCATSPSTFPARFFSETLQIL*CLSGDR Trigger: TCTGTCCCCAGACAAACACAATAGAATCTGCAATGT...TTCACTGAAAAACCTAGCAGGAAATGTGCTAGGTGAAGTAGCACACCCTTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR TCA 72 bp | ATAGGAAGGGAGAAAACCACAGTATCCTTTCCTATTTaGGATAGGTTCTTATTAGGAGTTCTGGCTGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: IGREKTTVSFPI*DRFLLGVLAGL Trigger: CAGGCCAGCCAGAACTCCTAATAAGAACCTATCTCAAATAGGAAAGGATACTGTGGTTTTCTCCCTTCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR GCA 72 bp | GATCCAAACTCAGGAAGTTGTTCTGAGATGCAACATTaGAGATTCTATTGTGTTTGTCTGGGGACAGACTTC | + |
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Preference number: 3 (lower is better) Translates to: DPNSGSCSEMQH*RFYCVCLGTDF Trigger: GAAGTCTGTCCCCAGACAAACACAATAGAATCTGCAATGTTGCATCTCAGAACAACTTCCTGAGTTTGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR GCA 72 bp | CCATTCAAGATCCAAACTCAGGAAGTTGTTCTGAGATaGAACATTGCAGATTCTATTGTGTTTGTCTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: PFKIQTQEVVLR*NIADSIVFVWG Trigger: TCCCCAGACAAACACAATAGAATCTGCAATGTTGCATCTCAGAACAACTTCCTGAGTTTGGATCTTGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR TCA 72 bp | GTAAACTATGTACTGAATGGGGAATTTAACTTGTCCTaGACCCTCAGCAGGGAAATGAGGCTAAGAAATGAA | + |
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Preference number: 3 (lower is better) Translates to: VNYVLNGEFNLS*TLSREMRLRNE Trigger: TTCATTTCTTAGCCTCATTTCCCTGCTGAGGGTTCAGGACAAGTTAAATTCCCCATTCAGTACATAGTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR TCA 72 bp | GAAGACCATTCAAGATCCAAACTCAGGAAGTTGTTCTaGGATGCAACATTGCAGATTCTATTGTGTTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: EDHSRSKLRKLF*DATLQILLCLS Trigger: AGACAAACACAATAGAATCTGCAATGTTGCATCTCAGAACAACTTCCTGAGTTTGGATCTTGAATGGTCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR TCA 72 bp | AGACATGGAAGGACTGGGAAGTGTGACGAGGATGTATaGTGTGAAATTCTCAGAGAGTCAATAAAAATGTTA | + |
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Preference number: 3 (lower is better) Translates to: RHGRTGKCDEDV*CEILRESIKML Trigger: TAACATTTTTATTGACTCTCTGAGAATTTCACATCATACATCCTCGTCACACTTCCCAGTCCTTCCATGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | CGGGGACTAGAAGTGACTAGTCCTTTGGAAACTGGAGCCAACCCGTGCTGTTCAACCACCATCACACGGTaGCCTTCTCCCTTGGGAATC | + |
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Preference number: 4 (lower is better) Translates to: RGLEVTSPLETGANPCCSTTITR*PSPLGI Trigger: GATTCCCAAGGGAGAAGGCCACCGTGTGATGGTGGT...TGAACAGCACGGGTTGGCTCCAGTTTCCAAAGGACTAGTCACTTCTAGTCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR GCA 90 bp | GGCCAGAGAGTTCAGCCCAGTTCTAGCCACATTTACCAGTCTCATTGTGTTCTGGGAGGGTTCACACTCTaGAGCTTCCTCCCTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: GQRVQPSSSHIYQSHCVLGGFTL*SFLPST Trigger: CGTGGAAGGGAGGAAGCTGCAGAGTGTGAACCCTCC...CAGAACACAATGAGACTGGTAAATGTGGCTAGAACTGGGCTGAACTCTCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR CAA 72 bp | CTAAGCCATGTTCGGGGACTAGAAGTGACTAGTCCTTaGGAAACTGGAGCCAACCCGTGCTGTTCATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LSHVRGLEVTSP*ETGANPCCSWA Trigger: TGCCCATGAACAGCACGGGTTGGCTCCAGTTTCCAAAGGACTAGTCACTTCTAGTCCCCGAACATGGCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR TCA 90 bp | ATCCTTGCATCTCAAAGGAGGACAGAACATCTGTCTTCTCCCTGGCATCTGAGCAGTTGGACCAAAGCATaGCTCTGCGCTCTGTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: ILASQRRTEHLSSPWHLSSWTKA*LCALSR Trigger: TCGGGACAGAGCGCAGAGTCATGCTTTGGTCCAACT...GCTCAGATGCCAGGGAGAAGACAGATGTTCTGTCCTCCTTTGAGATGCAAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | GCATTTCCTCGGAAATCAGGAATGAGATGTCCATTGTCCCCTACAGTATCAAAGCCATGCCCCGCAACATaGCCAGCCCATAGGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: AFPRKSGMRCPLSPTVSKPCPAT*PAHRPP Trigger: TGGAGGCCTATGGGCTGGCCATGTTGCGGGGCATGG...CTTTGATACTGTAGGGGACAATGGACATCTCATTCCTGATTTCCGAGGAAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | ATCCTTGCATCTCAAAGGAGGACAGAACATCTGTCTTCTCCCTGGCATCTGAGCCTCTCGATCCCCATCTaGTCTTGGTGGGTGGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ILASQRRTEHLSSPWHLSLSIPI*SWWVVR Trigger: TCTCACCACCCACCAAGACCAGATGGGGATCGAGAG...GCTCAGATGCCAGGGAGAAGACAGATGTTCTGTCCTCCTTTGAGATGCAAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR TCA 90 bp | GGCCAGAGAGTTCAGCCCAGTTCTAGCCACATTTACCAGTCTCATTGTGTTCTGGCTTCACTACCTGACTaGAGGTATTGCCGATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: GQRVQPSSSHIYQSHCVLASLPD*RYCRCP Trigger: AGGGCATCGGCAATACCTTCAGTCAGGTAGTGAAGC...CAGAACACAATGAGACTGGTAAATGTGGCTAGAACTGGGCTGAACTCTCTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR GCA 90 bp | GGCCAGAGAGTTCAGCCCAGTTCTAGCCACATTTACCAGTCTCATTGTGTTCTGTGGACAGAGGTTGCCTaGGAGAGCCATTCTGGATCA | + |
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Preference number: 4 (lower is better) Translates to: GQRVQPSSSHIYQSHCVLWTEVA*ESHSGS Trigger: TGATCCAGAATGGCTCTCGCAGGCAACCTCTGTCCA...CAGAACACAATGAGACTGGTAAATGTGGCTAGAACTGGGCTGAACTCTCTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR GCA 90 bp | GGAAGTTGTTCTGAGATGCAACATTGCAGATTCTATTGTGTTTGTCTGGGGACAGGCCTCCACAGGGACTaGCTCATAGTCGGCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GSCSEMQHCRFYCVCLGTGLHRD*LIVGFL Trigger: GAGGAAGCCGACTATGAGGCAGTCCCTGTGGAGGCC...TGTCCCCAGACAAACACAATAGAATCTGCAATGTTGCATCTCAGAACAACTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR GCA 90 bp | CTAGTCACATCCCCATCCTTGCATCTCAAAGGAGGACAGAACATCTGTCTTCTCTATTGCCGATGCCCTTaGCAGGTTTCCATCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LVTSPSLHLKGGQNICLLYCRCP*QVSIPC Trigger: GCATGGGATGGAAACCTGGCAAGGGCATCGGCAATA...GAGAAGACAGATGTTCTGTCCTCCTTTGAGATGCAAGGATGGGGATGTGACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | ATCCTTGCATCTCAAAGGAGGACAGAACATCTGTCTTCTCCCTGGCATCTGAGCTGTTCTGTGGAAGTTTaGCTCACATGGCCTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILASQRRTEHLSSPWHLSCSVEV*LTWPGF Trigger: GAAGCCAGGCCATGTGAGCCAAACTTCCACAGAACA...GCTCAGATGCCAGGGAGAAGACAGATGTTCTGTCCTCCTTTGAGATGCAAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | TCTTCAGTGCATTATCAGCCCAGAGACATTCCTAGAGGTCAAACGTATGTGCTAGGTGGCCTTCTCCCTTaGGAATCAGGGTCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVHYQPRDIPRGQTYVLGGLLP*ESGSPA Trigger: TGCTGGAGACCCTGATTCCCAAGGGAGAAGGCCACC...TAGCACATACGTTTGACCTCTAGGAATGTCTCTGGGCTGATAATGCACTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | CTGGGATGTTTTGATTCTTTTCAGTGTGTGTGGCGGGCTGACAAGTTGGGTATTCACCTTTCCAGCATGTaGTCCGAGCACCACCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGCFDSFQCVWRADKLGIHLSSM*SEHHHH Trigger: GTGATGGTGGTGCTCGGACCACATGCTGGAAAGGTG...AATACCCAACTTGTCAGCCCGCCACACACACTGAAAAGAATCAAAACATCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | GGCCAGAGAGTTCAGCCCAGTTCTAGCCACATTTACCAGTCTCATTGTGTTCTGCCATGTACTGGCAGATaGCGTTATAGTGGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQRVQPSSSHIYQSHCVLPCTGR*RYSGAP Trigger: TGGAGCTCCACTATAACGCCATCTGCCAGTACATGG...CAGAACACAATGAGACTGGTAAATGTGGCTAGAACTGGGCTGAACTCTCTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR TCA 90 bp | ACACTGAGCATTTCCTCGGAAATCAGGAATGAGATGTCCATTGTCCCCTACAGTGGACAACACACCGTCTaGCATCAACACGGTGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLSISSEIRNEMSIVPYSGQHTV*HQHGAS Trigger: ACTAGCACCGTGTTGATGTCAGACGGTGTGTTGTCC...ACTGTAGGGGACAATGGACATCTCATTCCTGATTTCCGAGGAAATGCTCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR TCA 90 bp | CATCCTTGCATCTCAAAGGAGGACAGAACATCTGTCTTCTCCCTGGCATCTGAGCTTTTGCCTCCTCTTTaGGTCTTCCTGATTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPCISKEDRTSVFSLASELLPPL*VFLILC Trigger: GCACAGAATCAGGAAGACTCAAAGAGGAGGCAAAAG...CTCAGATGCCAGGGAGAAGACAGATGTTCTGTCCTCCTTTGAGATGCAAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR GCA 90 bp | GCATTTCCTCGGAAATCAGGAATGAGATGTCCATTGTCCCCTACAGTATCAAAGTGGCTATCAAACTCCTaGTGGGAAACAGGCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AFPRKSGMRCPLSPTVSKWLSNS*WETGRR Trigger: CCTGCGGCCTGTTTCCCAGCAGGAGTTTGATAGCCA...CTTTGATACTGTAGGGGACAATGGACATCTCATTCCTGATTTCCGAGGAAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR GCA 90 bp | ATCCTTGCATCTCAAAGGAGGACAGAACATCTGTCTTCTCCCTGGCATCTGAGCACACGTAGGTCCCTGTaGAACCAGTGCTTGTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ILASQRRTEHLSSPWHLSTRRSL*NQCLFL Trigger: TAGAAACAAGCACTGGTTGCACAGGGACCTACGTGT...GCTCAGATGCCAGGGAGAAGACAGATGTTCTGTCCTCCTTTGAGATGCAAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | GCATTTCCTCGGAAATCAGGAATGAGATGTCCATTGTCCCCTACAGTATCAAAGTTGGCTCACATGGCCTaGCTTCGAGGTGTGGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: AFPRKSGMRCPLSPTVSKLAHMA*LRGVAI Trigger: GATAGCCACACCTCGAAGCCAGGCCATGTGAGCCAA...CTTTGATACTGTAGGGGACAATGGACATCTCATTCCTGATTTCCGAGGAAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | TCTTCAGTGCATTATCAGCCCAGAGACATTCCTAGAGGTCAAACGTATGTGCTAGAAGTTTGGCTCACATaGCCTGGCTTCGAGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSVHYQPRDIPRGQTYVLEVWLT*PGFEVW Trigger: CCACACCTCGAAGCCAGGCCATGTGAGCCAAACTTC...TAGCACATACGTTTGACCTCTAGGAATGTCTCTGGGCTGATAATGCACTGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR TCA 90 bp | TCTTCAGTGCATTATCAGCCCAGAGACATTCCTAGAGGTCAAACGTATGTGCTAGGACAGACGTGCGAGTaGACCCGAAAGAAATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVHYQPRDIPRGQTYVLGQTCE*TRKKLE Trigger: CTCCAATTTCTTTCGGGTTCACTCGCACGTCTGTCC...TAGCACATACGTTTGACCTCTAGGAATGTCTCTGGGCTGATAATGCACTGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR TCA 90 bp | CTCAAAGGGTGTGCTACTTCACCTAGCACATTTCCTGCTAGGTTTTTCAGTGAACCATGCATCAGCCCTTaGGGTTGGCCTTCCTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: LKGCATSPSTFPARFFSEPCISP*GWPSLS Trigger: TGATAAGGAAGGCCAACCTCAAGGGCTGATGCATGG...TTCACTGAAAAACCTAGCAGGAAATGTGCTAGGTGAAGTAGCACACCCTTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR GCA 90 bp | TCGGAAATCAGGAATGAGATGTCCATTGTCCCCTACAGTATCAAAGTCTTAGATCGTGGGGTCAACACCTaGATTCTCCCTCTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEIRNEMSIVPYSIKVLDRGVNT*ILPLLQ Trigger: CTGGAGGAGAGGGAGAATGCAGGTGTTGACCCCACG...ATCTAAGACTTTGATACTGTAGGGGACAATGGACATCTCATTCCTGATTTCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR GCA 90 bp | GCATTTCCTCGGAAATCAGGAATGAGATGTCCATTGTCCCCTACAGTATCAAAGTCCCTGTGCAACCAGTaGTTGTTTCTAGGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFPRKSGMRCPLSPTVSKSLCNQ*LFLGAA Trigger: AGCAGCCCCTAGAAACAAGCACTGGTTGCACAGGGA...CTTTGATACTGTAGGGGACAATGGACATCTCATTCCTGATTTCCGAGGAAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | CTAGTCACATCCCCATCCTTGCATCTCAAAGGAGGACAGAACATCTGTCTTCTCGGAGTACATCCTTTCTaGATCATGGGGATAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVTSPSLHLKGGQNICLLGVHPF*IMGIVS Trigger: GCTCACTATCCCCATGATCCAGAAAGGATGTACTCC...GAGAAGACAGATGTTCTGTCCTCCTTTGAGATGCAAGGATGGGGATGTGACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | CTCAAAGGGTGTGCTACTTCACCTAGCACATTTCCTGCTAGGTTTTTCAGTGAACTATCAAACTCCTGCTaGGAAACAGGCCGCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKGCATSPSTFPARFFSELSNSC*ETGRRQ Trigger: TTGCCTGCGGCCTGTTTCCCAGCAGGAGTTTGATAG...TTCACTGAAAAACCTAGCAGGAAATGTGCTAGGTGAAGTAGCACACCCTTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR TCA 90 bp | CTCAAAGGGTGTGCTACTTCACCTAGCACATTTCCTGCTAGGTTTTTCAGTGAACACGGTGCTAGTTTCTaGGGATGGCTTAGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKGCATSPSTFPARFFSEHGASF*GWLRVL Trigger: AAGAACCCTAAGCCATCCTCAGAAACTAGCACCGTG...TTCACTGAAAAACCTAGCAGGAAATGTGCTAGGTGAAGTAGCACACCCTTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR TCA 90 bp | CTGGGATGTTTTGATTCTTTTCAGTGTGTGTGGCGGGCTGACAAGTTGGGTATTCTCTTTGAGTCTTCCTaGTTCTGTGCAGCCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGCFDSFQCVWRADKLGILFESS*FCAAFN Trigger: ATTGAAGGCTGCACAGAATCAGGAAGACTCAAAGAG...AATACCCAACTTGTCAGCCCGCCACACACACTGAAAAGAATCAAAACATCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | GCATTTCCTCGGAAATCAGGAATGAGATGTCCATTGTCCCCTACAGTATCAAAGGAAATCTTTCTCCTCTaGGGCCTGTCTTTCGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: AFPRKSGMRCPLSPTVSKEIFLL*GLSFAI Trigger: GATAGCGAAAGACAGGCCCCAGAGGAGAAAGATTTC...CTTTGATACTGTAGGGGACAATGGACATCTCATTCCTGATTTCCGAGGAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | TCGGAAATCAGGAATGAGATGTCCATTGTCCCCTACAGTATCAAAGTCTTAGATCTGCTTTCTCAGTCTTaGGCACAGGTCCATCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SEIRNEMSIVPYSIKVLDLLSQS*AQVHPV Trigger: GACAGGATGGACCTGTGCCCAAGACTGAGAAAGCAG...ATCTAAGACTTTGATACTGTAGGGGACAATGGACATCTCATTCCTGATTTCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| 3UTR CAA 72 bp | GCCACATTTACCAGTCTCATTGTGTTCTGGGATGTTTaGATTCTTTTCAGTGTGTGTGGCGGGCTGACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ATFTSLIVFWDV*ILFSVCGGLTS Trigger: ACTTGTCAGCCCGCCACACACACTGAAAAGAATCAAAACATCCCAGAACACAATGAGACTGGTAAATGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR GCA 90 bp | GCATTTCCTCGGAAATCAGGAATGAGATGTCCATTGTCCCCTACAGTATCAAAGCGAGGCTGTTCCAGTTaGTCTGTTTTGTTGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AFPRKSGMRCPLSPTVSKRGCSS*SVLLFC Trigger: ACAGAACAACAAAACAGAGCAACTGGAACAGCCTCG...CTTTGATACTGTAGGGGACAATGGACATCTCATTCCTGATTTCCGAGGAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | GTAAGTGCTGAAAATCCATTTGACAGTGATAAAAGCTGTGAGACTGTAGAAATAAGTTCCTTCACAGCCTaGGACAACACACCGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSAENPFDSDKSCETVEISSFTA*DNTPSD Trigger: GTCAGACGGTGTGTTGTCCCAGGCTGTGAAGGAACT...TATTTCTACAGTCTCACAGCTTTTATCACTGTCAAATGGATTTTCAGCACTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CCA 90 bp | GGAAGTTGTTCTGAGATGCAACATTGCAGATTCTATTGTGTTTGTCTGGGGACACTTCAATTGTCATCTTaGTGTTATAATAGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSCSEMQHCRFYCVCLGTLQLSS*CYNSGH Trigger: GTGGCCGCTATTATAACACCAAGATGACAATTGAAG...TGTCCCCAGACAAACACAATAGAATCTGCAATGTTGCATCTCAGAACAACTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS TCA 90 bp | CGCTATCTCCGAGGTCTGCCAGTCGCCTCCGGACAGACGTGCGAGTaGACCCGAAAGAAATTGGAGCCATTGACGGGGCAGACGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RYLRGLPVASGQTCE*TRKKLEPLTGQTAA Trigger: CGCCGCCGTCTGCCCCGTCAATGGCTCCAATTTCTTTCGGGTTCACTCGCACGTCTGTCCGGAGGCGACTGGCAGACCTCGGAGATAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS GCA 90 bp | TCCCATGCCCCGCAACATGGCCAGCCCATAGGCCTCCACAGGGACTaGCTCATAGTCGGCTTCCTCCGGCACTGTCTCAGCCTGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHAPQHGQPIGLHRD*LIVGFLRHCLSLRF Trigger: GAACCTCAGGCTGAGACAGTGCCGGAGGAAGCCGACTATGAGGCAGTCCCTGTGGAGGCCTATGGGCTGGCCATGTTGCGGGGCATGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 90 bp | CTGCAGCTTCCTCCCTTCCACGGTCGCCAAGAAATCTTTCTCCTCTaGGGCCTGTCTTTCGCTATCTCCGAGGTCTGCCAGTCGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LQLPPFHGRQEIFLL*GLSFAISEVCQSPP Trigger: CGGAGGCGACTGGCAGACCTCGGAGATAGCGAAAGACAGGCCCCAGAGGAGAAAGATTTCTTGGCGACCGTGGAAGGGAGGAAGCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 90 bp | TATTGCCGATGCCCTTGCCAGGTTTCCATCCCATGCCCCGCAACATaGCCAGCCCATAGGCCTCCACAGGGACTGCCTCATAGTCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: YCRCPCQVSIPCPAT*PAHRPPQGLPHSRL Trigger: AAGCCGACTATGAGGCAGTCCCTGTGGAGGCCTATGGGCTGGCCATGTTGCGGGGCATGGGATGGAAACCTGGCAAGGGCATCGGCAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 90 bp | CTGCGCTCTGTCCCGACTCCTAAGAAGTCCCACCTTTCCAGCATGTaGTCCGAGCACCACCATCACACGGTGGCCTTCTCCCTTGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LRSVPTPKKSHLSSM*SEHHHHTVAFSLGN Trigger: ATTCCCAAGGGAGAAGGCCACCGTGTGATGGTGGTGCTCGGACCACATGCTGGAAAGGTGGGACTTCTTAGGAGTCGGGACAGAGCGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 90 bp | CAGCCCTTGAGGTTGGCCTTCCTTATCATTCTCTCGATCCCCATCTaGTCTTGGTGGGTGGTGAGAGCCTACGGAGGCCAAGTCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QPLRLAFLIILSIPI*SWWVVRAYGGQVLS Trigger: GCTCAGGACTTGGCCTCCGTAGGCTCTCACCACCCACCAAGACCAGATGGGGATCGAGAGAATGATAAGGAAGGCCAACCTCAAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 90 bp | GATGGCTTAGGGTTCTTGGACAGAGGTTGCCTGCGAGAGCCATTCTaGATCAACGGGATAACCAGCTCCTTGGGGGCTTCTGGAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DGLGFLDRGCLREPF*INGITSSLGASGGF Trigger: GAACCCTCCAGAAGCCCCCAAGGAGCTGGTTATCCCGTTGATCCAGAATGGCTCTCGCAGGCAACCTCTGTCCAAGAACCCTAAGCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 90 bp | AGTCCCACCTTTCCAGCATGTGGTCCGAGCACCACCATCACACGGTaGCCTTCTCCCTTGGGAATCAGGGTCTCCAGCATATCTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPTFPACGPSTTITR*PSPLGIRVSSISSL Trigger: GAGAGAAGATATGCTGGAGACCCTGATTCCCAAGGGAGAAGGCCACCGTGTGATGGTGGTGCTCGGACCACATGCTGGAAAGGTGGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CAA 90 bp | CGGGGACTAGAAGTGACTAGTCCTTTGGAAACTGGAGCCAACCCGTGCTGTTCAGGGATAACCAGCTCCTaGGGGGCTTCTGGAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGLEVTSPLETGANPCCSGITSS*GASGGF Trigger: GAACCCTCCAGAAGCCCCCAAGGAGCTGGTTATCCC...TGAACAGCACGGGTTGGCTCCAGTTTCCAAAGGACTAGTCACTTCTAGTCCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS TCA 90 bp | TGGAGCTCCACCACCTGGTTCTCTCTCCTAAGTTGGACCAAAGCATaGCTCTGCGCTCTGTCCCGACTCCTAAGAAGTCCCACCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WSSTTWFSLLSWTKA*LCALSRLLRSPTFP Trigger: TGGAAAGGTGGGACTTCTTAGGAGTCGGGACAGAGCGCAGAGTCATGCTTTGGTCCAACTTAGGAGAGAGAACCAGGTGGTGGAGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS GCA 90 bp | ACGGTGCTAGTTTCTGAGGATGGCTTAGGGTTCTTGGACAGAGGTTaGCTGCGAGAGCCATTCTGGATCAACGGGATAACCAGCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TVLVSEDGLGFLDRG*LREPFWINGITSSL Trigger: CAAGGAGCTGGTTATCCCGTTGATCCAGAATGGCTCTCGCAGGCAACCTCTGTCCAAGAACCCTAAGCCATCCTCAGAAACTAGCACCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS GCA 90 bp | TGTAGTTTGTCAATGAACCGCACACGTAGGTCCCTGTGCAACCAGTaGTTGTTTCTAGGGGCTGCTTTCTCAGTCTTGGGCACAGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CSLSMNRTRRSLCNQ*LFLGAAFSVLGTGP Trigger: TGGACCTGTGCCCAAGACTGAGAAAGCAGCCCCTAGAAACAAGCACTGGTTGCACAGGGACCTACGTGTGCGGTTCATTGACAAACTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049896.13 ENSMUST00000154562.2 |
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| CDS GCA 90 bp | CCACTCTTGTGTAGTTTGTCAATGAACCGCACACGTAGGTCCCTGTaGAACCAGTGCTTGTTTCTAGGGGCTGCTTTCTCAGTCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLLCSLSMNRTRRSL*NQCLFLGAAFSVLG Trigger: GCCCAAGACTGAGAAAGCAGCCCCTAGAAACAAGCACTGGTTGCACAGGGACCTACGTGTGCGGTTCATTGACAAACTACACAAGAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049896.13 ENSMUST00000154562.2 |
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| CDS CCA 90 bp | AGTTGCTCTGTTTTGTTGTTCTGTGGAAGTTTGGCTCACATGGCCTaGCTTCGAGGTGTGGCTATCAAACTCCTGCTGGGAAACAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SCSVLLFCGSLAHMA*LRGVAIKLLLGNRP Trigger: CGGCCTGTTTCCCAGCAGGAGTTTGATAGCCACACCTCGAAGCCAGGCCATGTGAGCCAAACTTCCACAGAACAACAAAACAGAGCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 90 bp | GACGAGGCTGTTCCAGTTGCTCTGTTTTGTTGTTCTGTGGAAGTTTaGCTCACATGGCCTGGCTTCGAGGTGTGGCTATCAAACTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DEAVPVALFCCSVEV*LTWPGFEVWLSNSC Trigger: GCAGGAGTTTGATAGCCACACCTCGAAGCCAGGCCATGTGAGCCAAACTTCCACAGAACAACAAAACAGAGCAACTGGAACAGCCTCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS GCA 90 bp | ACATCCTTTCTGGATCATGGGGATAGTGAGCGTGGGGTCAACACCTaGATTCTCCCTCTCCTCCAGAGACTTCTTGGATTCCTCAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSFLDHGDSERGVNT*ILPLLQRLLGFLNE Trigger: CTCATTGAGGAATCCAAGAAGTCTCTGGAGGAGAGGGAGAATGCAGGTGTTGACCCCACGCTCACTATCCCCATGATCCAGAAAGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CAA 90 bp | ATCCTTGCATCTCAAAGGAGGACAGAACATCTGTCTTCTCCCTGGCATCTGAGCTTCGGCCTTATAGAGTaGACTCGGGGCTTCACTACC | + |
|
Preference number: 5 (lower is better) Translates to: ILASQRRTEHLSSPWHLSFGLIE*TRGFTT Trigger: GGTAGTGAAGCCCCGAGTCAACTCTATAAGGCCGAA...GCTCAGATGCCAGGGAGAAGACAGATGTTCTGTCCTCCTTTGAGATGCAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CAA 90 bp | GGCCAGAGAGTTCAGCCCAGTTCTAGCCACATTTACCAGTCTCATTGTGTTCTGCTGTGCAACCAGTGCTaGTTTCTAGGGGCTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GQRVQPSSSHIYQSHCVLLCNQC*FLGAAF Trigger: GAAAGCAGCCCCTAGAAACAAGCACTGGTTGCACAG...CAGAACACAATGAGACTGGTAAATGTGGCTAGAACTGGGCTGAACTCTCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 90 bp | CCTTCAATGACGAGGCTGTTCCAGTTGCTCTGTTTTGTTGTTCTGTaGAAGTTTGGCTCACATGGCCTGGCTTCGAGGTGTGGCTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: PSMTRLFQLLCFVVL*KFGSHGLASRCGYQ Trigger: TTGATAGCCACACCTCGAAGCCAGGCCATGTGAGCCAAACTTCCACAGAACAACAAAACAGAGCAACTGGAACAGCCTCGTCATTGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 90 bp | GTTCCAGTTGCTCTGTTTTGTTGTTCTGTGGAAGTTTGGCTCACATaGCTAACAGTCACAATGCGGTTGCCCACTGCCAAGCGAACCATG | + |
|
Preference number: 5 (lower is better) Translates to: VPVALFCCSVEVWLT*LTVTMRLPTAKRTM Trigger: CATGGTTCGCTTGGCAGTGGGCAACCGCATTGTGACTGTTAGCCATGTGAGCCAAACTTCCACAGAACAACAAAACAGAGCAACTGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154562.2 |
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| CDS-3UTR CAA 90 bp | TCAGTGCATTATCAGCCCAGAGACATTCCTAGAGGTCAAACGTATGTGCTACTAGATCCCCATCTGGTCTaGGTGGGTGGTGAGAGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: SVHYQPRDIPRGQTYVLLDPHLV*VGGESL Trigger: TAGGCTCTCACCACCCACCAAGACCAGATGGGGATC...TAGTAGCACATACGTTTGACCTCTAGGAATGTCTCTGGGCTGATAATGCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CAA 90 bp | CATCCTTGCATCTCAAAGGAGGACAGAACATCTGTCTTCTCCCTGGCATCTGAGCATCAGCCCTTGAGGTaGGCCTTCCTTATCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HPCISKEDRTSVFSLASEHQPLR*AFLIIL Trigger: GAGAATGATAAGGAAGGCCAACCTCAAGGGCTGATG...CTCAGATGCCAGGGAGAAGACAGATGTTCTGTCCTCCTTTGAGATGCAAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS-3UTR CAA 90 bp | ACACTGAGCATTTCCTCGGAAATCAGGAATGAGATGTCCATTGTCCCCTACAGTACCATGGCCCGTACGTaGTCAGGATCTAGGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TLSISSEIRNEMSIVPYSTMART*SGSRPS Trigger: AGAAGGCCTAGATCCTGACAACGTACGGGCCATGGT...ACTGTAGGGGACAATGGACATCTCATTCCTGATTTCCGAGGAAATGCTCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CAA 90 bp | GGCCAGAGAGTTCAGCCCAGTTCTAGCCACATTTACCAGTCTCATTGTGTTCTGTTGTTCTGTGGAAGTTaGGCTCACATGGCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GQRVQPSSSHIYQSHCVLLFCGS*AHMAWL Trigger: AAGCCAGGCCATGTGAGCCAAACTTCCACAGAACAA...CAGAACACAATGAGACTGGTAAATGTGGCTAGAACTGGGCTGAACTCTCTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CAA 90 bp | TCAGTGCATTATCAGCCCAGAGACATTCCTAGAGGTCAAACGTATGTGCTACTAGATGGCTTAGGGTTCTaGGACAGAGGTTGCCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SVHYQPRDIPRGQTYVLLDGLGF*DRGCLR Trigger: TCGCAGGCAACCTCTGTCCAAGAACCCTAAGCCATC...TAGTAGCACATACGTTTGACCTCTAGGAATGTCTCTGGGCTGATAATGCACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CAA 90 bp | TCAGTGCATTATCAGCCCAGAGACATTCCTAGAGGTCAAACGTATGTGCTACTAGTATTGCCGATGCCCTaGCCAGGTTTCCATCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SVHYQPRDIPRGQTYVLLVLPMP*PGFHPM Trigger: CATGGGATGGAAACCTGGCAAGGGCATCGGCAATAC...TAGTAGCACATACGTTTGACCTCTAGGAATGTCTCTGGGCTGATAATGCACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CAA 90 bp | CTGGGATGTTTTGATTCTTTTCAGTGTGTGTGGCGGGCTGACAAGTTGGGTATTTCCATGCATCAGCCCTaGAGGTTGGCCTTCCTTATC | + |
|
Preference number: 5 (lower is better) Translates to: LGCFDSFQCVWRADKLGISMHQP*RLAFLI Trigger: GATAAGGAAGGCCAACCTCAAGGGCTGATGCATGGA...AATACCCAACTTGTCAGCCCGCCACACACACTGAAAAGAATCAAAACATCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 90 bp | ATCTTCCAGAACTCGGCCTTCATCCGTCCGACACACACATGTGTCTaGGCTCAGGACATCTTCAATTGTCATCTTGGTGTTATAATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: IFQNSAFIRPTHTCV*AQDIFNCHLGVIIA Trigger: CGCTATTATAACACCAAGATGACAATTGAAGATGTCCTGAGCCCAGACACATGTGTGTGTCGGACGGATGAAGGCCGAGTTCTGGAAGAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049896.13 ENSMUST00000154562.2 |
||
| CDS-3UTR CAA 90 bp | CTAGTCACATCCCCATCCTTGCATCTCAAAGGAGGACAGAACATCTGTCTTCTCACGAGGCTGTTCCAGTaGCTCTGTTTTGTTGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVTSPSLHLKGGQNICLLTRLFQ*LCFVVL Trigger: CAGAACAACAAAACAGAGCAACTGGAACAGCCTCGT...GAGAAGACAGATGTTCTGTCCTCCTTTGAGATGCAAGGATGGGGATGTGACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS-3UTR CAA 90 bp | GTAAGTGCTGAAAATCCATTTGACAGTGATAAAAGCTGTGAGACTGTAGAAATACGGTGGCCTTCTCCCTaGGGAATCAGGGTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSAENPFDSDKSCETVEIRWPSP*GIRVSS Trigger: GCTGGAGACCCTGATTCCCAAGGGAGAAGGCCACCG...TATTTCTACAGTCTCACAGCTTTTATCACTGTCAAATGGATTTTCAGCACTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS-3UTR CAA 90 bp | TCAGTGCATTATCAGCCCAGAGACATTCCTAGAGGTCAAACGTATGTGCTACTATCCTCCAGAGACTTCTaGGATTCCTCAATGAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVHYQPRDIPRGQTYVLLSSRDF*DSSMSS Trigger: GGAACTCATTGAGGAATCCAAGAAGTCTCTGGAGGA...TAGTAGCACATACGTTTGACCTCTAGGAATGTCTCTGGGCTGATAATGCACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS-3UTR CAA 90 bp | TCTTCAGTGCATTATCAGCCCAGAGACATTCCTAGAGGTCAAACGTATGTGCTAGTTCTCTCTCCTAAGTaGGACCAAAGCATGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSVHYQPRDIPRGQTYVLVLSPK*DQSMTL Trigger: CAGAGTCATGCTTTGGTCCAACTTAGGAGAGAGAAC...TAGCACATACGTTTGACCTCTAGGAATGTCTCTGGGCTGATAATGCACTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS-3UTR CAA 90 bp | GTAAGTGCTGAAAATCCATTTGACAGTGATAAAAGCTGTGAGACTGTAGAAATAAGTTGCTCTGTTTTGTaGTTCTGTGGAAGTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VSAENPFDSDKSCETVEISCSVL*FCGSLA Trigger: AGCCAAACTTCCACAGAACAACAAAACAGAGCAACT...TATTTCTACAGTCTCACAGCTTTTATCACTGTCAAATGGATTTTCAGCACTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS TCA 72 bp | AGACGTGCGAGTGAACCCGAAAGAAATTGGAGCCATTaGCGGGGCAGACGGCGGCGGACTCTCACGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RRASEPERNWSH*RGRRRRTLTAR Trigger: GCGGGCCGTGAGAGTCCGCCGCCGTCTGCCCCGTCAATGGCTCCAATTTCTTTCGGGTTCACTCGCACGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS GCA 72 bp | CTCCTCTGGGGCCTGTCTTTCGCTATCTCCGAGGTCTaGCAGTCGCCTCCGGACAGACGTGCGAGTGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: LLWGLSFAISEV*QSPPDRRASEP Trigger: GGGTTCACTCGCACGTCTGTCCGGAGGCGACTGGCAGACCTCGGAGATAGCGAAAGACAGGCCCCAGAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS CCA 72 bp | TGCCCTTGCCAGGTTTCCATCCCATGCCCCGCAACATaGCCAGCCCATAGGCCTCCACAGGGACTGCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CPCQVSIPCPAT*PAHRPPQGLPH Trigger: ATGAGGCAGTCCCTGTGGAGGCCTATGGGCTGGCCATGTTGCGGGGCATGGGATGGAAACCTGGCAAGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS TCA 72 bp | CGAGGTCTGCCAGTCGCCTCCGGACAGACGTGCGAGTaGACCCGAAAGAAATTGGAGCCATTGACGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGLPVASGQTCE*TRKKLEPLTGQ Trigger: CTGCCCCGTCAATGGCTCCAATTTCTTTCGGGTTCACTCGCACGTCTGTCCGGAGGCGACTGGCAGACCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS GCA 72 bp | AGGTATTGCCGATGCCCTTGCCAGGTTTCCATCCCATaGCCCGCAACATGGCCAGCCCATAGGCCTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: RYCRCPCQVSIP*PATWPAHRPPQ Trigger: CTGTGGAGGCCTATGGGCTGGCCATGTTGCGGGGCATGGGATGGAAACCTGGCAAGGGCATCGGCAATACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 72 bp | GTCCCGACTCCTAAGAAGTCCCACCTTTCCAGCATGTaGTCCGAGCACCACCATCACACGGTGGCCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VPTPKKSHLSSM*SEHHHHTVAFS Trigger: GGAGAAGGCCACCGTGTGATGGTGGTGCTCGGACCACATGCTGGAAAGGTGGGACTTCTTAGGAGTCGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS GCA 72 bp | ACCAGCTCCTTGGGGGCTTCTGGAGGGTTCACACTCTaGAGCTTCCTCCCTTCCACGGTCGCCAAGAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: TSSLGASGGFTL*SFLPSTVAKKS Trigger: AGATTTCTTGGCGACCGTGGAAGGGAGGAAGCTGCAGAGTGTGAACCCTCCAGAAGCCCCCAAGGAGCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS CCA 72 bp | CCTCCCTTCCACGGTCGCCAAGAAATCTTTCTCCTCTaGGGCCTGTCTTTCGCTATCTCCGAGGTCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PPFHGRQEIFLL*GLSFAISEVCQ Trigger: CTGGCAGACCTCGGAGATAGCGAAAGACAGGCCCCAGAGGAGAAAGATTTCTTGGCGACCGTGGAAGGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CAA 72 bp | GGCCGCAGGCAATACTCACTAACAGTCACAATGCGGTaGCCCACTGCCAAGCGAACCATGGCCCGTACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GRRQYSLTVTMR*PTAKRTMARTL Trigger: CAACGTACGGGCCATGGTTCGCTTGGCAGTGGGCAACCGCATTGTGACTGTTAGTGAGTATTGCCTGCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS CAA 90 bp | CTTGAGGTTGGCCTTCCTTATCATTCTCTCGATCCCCATCTGGTCTaGGTGGGTGGTGAGAGCCTACGGAGGCCAAGTCCTGAGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LEVGLPYHSLDPHLV*VGGESLRRPSPEPP Trigger: TGGAGGCTCAGGACTTGGCCTCCGTAGGCTCTCACCACCCACCAAGACCAGATGGGGATCGAGAGAATGATAAGGAAGGCCAACCTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS GCA 72 bp | GCTCACATGGCTAACAGTCACAATGCGGTTGCCCACTaGCAAGCGAACCATGGCCCGTACGTTGTCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: AHMANSHNAVAH*QANHGPYVVRI Trigger: GATCCTGACAACGTACGGGCCATGGTTCGCTTGGCAGTGGGCAACCGCATTGTGACTGTTAGCCATGTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154562.2 |
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| CDS CCA 72 bp | GGGTTCTTGGACAGAGGTTGCCTGCGAGAGCCATTCTaGATCAACGGGATAACCAGCTCCTTGGGGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GFLDRGCLREPF*INGITSSLGAS Trigger: AGAAGCCCCCAAGGAGCTGGTTATCCCGTTGATCCAGAATGGCTCTCGCAGGCAACCTCTGTCCAAGAACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS CCA 72 bp | CAGTCACAATGCGGTTGCCCACTGCCAAGCGAACCATaGCCCGTACGTTGTCAGGATCTAGGCCTTCTACCT | + |
|
Preference number: 6 (lower is better) Translates to: QSQCGCPLPSEP*PVRCQDLGLLP Trigger: AGGTAGAAGGCCTAGATCCTGACAACGTACGGGCCATGGTTCGCTTGGCAGTGGGCAACCGCATTGTGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049896.13 ENSMUST00000154562.2 |
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| CDS CCA 72 bp | TTTCCAGCATGTGGTCCGAGCACCACCATCACACGGTaGCCTTCTCCCTTGGGAATCAGGGTCTCCAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: FPACGPSTTITR*PSPLGIRVSSI Trigger: TATGCTGGAGACCCTGATTCCCAAGGGAGAAGGCCACCGTGTGATGGTGGTGCTCGGACCACATGCTGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 72 bp | CTTCATCTGAGTCACCGGGGCCCATGTACTGGCAGATaGCGTTATAGTGGAGCTCCACCACCTGGTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHLSHRGPCTGR*RYSGAPPPGSL Trigger: GAGAGAACCAGGTGGTGGAGCTCCACTATAACGCCATCTGCCAGTACATGGGCCCCGGTGACTCAGATGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CAA 72 bp | GGCCTTCCTTATCATTCTCTCGATCCCCATCTGGTCTaGGTGGGTGGTGAGAGCCTACGGAGGCCAAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GLPYHSLDPHLV*VGGESLRRPSP Trigger: AGGACTTGGCCTCCGTAGGCTCTCACCACCCACCAAGACCAGATGGGGATCGAGAGAATGATAAGGAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CAA 72 bp | GGTCCGAGCACCACCATCACACGGTGGCCTTCTCCCTaGGGAATCAGGGTCTCCAGCATATCTTCTCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: GPSTTITRWPSP*GIRVSSISSLT Trigger: TGTGAGAGAAGATATGCTGGAGACCCTGATTCCCAAGGGAGAAGGCCACCGTGTGATGGTGGTGCTCGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049896.13 ENSMUST00000154562.2 |
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| CDS CAA 90 bp | TGGGAAACAGGCCGCAGGCAATACTCACTAACAGTCACAATGCGGTaGCCCACTGCCAAGCGAACCATGGCCCGTACGTTGTCAGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: WETGRRQYSLTVTMR*PTAKRTMARTLSGS Trigger: AGATCCTGACAACGTACGGGCCATGGTTCGCTTGGCAGTGGGCAACCGCATTGTGACTGTTAGTGAGTATTGCCTGCGGCCTGTTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CAA 90 bp | CCAGCATGTGGTCCGAGCACCACCATCACACGGTGGCCTTCTCCCTaGGGAATCAGGGTCTCCAGCATATCTTCTCTCACATCTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PACGPSTTITRWPSP*GIRVSSISSLTSSR Trigger: TCTGGAAGATGTGAGAGAAGATATGCTGGAGACCCTGATTCCCAAGGGAGAAGGCCACCGTGTGATGGTGGTGCTCGGACCACATGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049896.13 ENSMUST00000154562.2 |
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| CDS CCA 72 bp | TTCCTTATCATTCTCTCGATCCCCATCTGGTCTTGGTaGGTGGTGAGAGCCTACGGAGGCCAAGTCCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLIILSIPIWSW*VVRAYGGQVLS Trigger: GCTCAGGACTTGGCCTCCGTAGGCTCTCACCACCCACCAAGACCAGATGGGGATCGAGAGAATGATAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 72 bp | AGGTTGGCCTTCCTTATCATTCTCTCGATCCCCATCTaGTCTTGGTGGGTGGTGAGAGCCTACGGAGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RLAFLIILSIPI*SWWVVRAYGGQ Trigger: TTGGCCTCCGTAGGCTCTCACCACCCACCAAGACCAGATGGGGATCGAGAGAATGATAAGGAAGGCCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CCA 72 bp | TGGCCTGGCTTCGAGGTGTGGCTATCAAACTCCTGCTaGGAAACAGGCCGCAGGCAATACTCACTAACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: WPGFEVWLSNSC*ETGRRQYSLTV Trigger: GACTGTTAGTGAGTATTGCCTGCGGCCTGTTTCCCAGCAGGAGTTTGATAGCCACACCTCGAAGCCAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CAA 72 bp | GAAGTTTGGCTCACATGGCTAACAGTCACAATGCGGTaGCCCACTGCCAAGCGAACCATGGCCCGTACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: EVWLTWLTVTMR*PTAKRTMARTL Trigger: CAACGTACGGGCCATGGTTCGCTTGGCAGTGGGCAACCGCATTGTGACTGTTAGCCATGTGAGCCAAACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154562.2 |
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| CDS TCA 72 bp | ACCACCTGGTTCTCTCTCCTAAGTTGGACCAAAGCATaGCTCTGCGCTCTGTCCCGACTCCTAAGAAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TTWFSLLSWTKA*LCALSRLLRSP Trigger: GGGACTTCTTAGGAGTCGGGACAGAGCGCAGAGTCATGCTTTGGTCCAACTTAGGAGAGAGAACCAGGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS GCA 72 bp | CTGGATCATGGGGATAGTGAGCGTGGGGTCAACACCTaGATTCTCCCTCTCCTCCAGAGACTTCTTGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: LDHGDSERGVNT*ILPLLQRLLGF Trigger: GAATCCAAGAAGTCTCTGGAGGAGAGGGAGAATGCAGGTGTTGACCCCACGCTCACTATCCCCATGATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS GCA 72 bp | GCAATACTCACTAACAGTCACAATGCGGTTGCCCACTaGCAAGCGAACCATGGCCCGTACGTTGTCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: AILTNSHNAVAH*QANHGPYVVRI Trigger: GATCCTGACAACGTACGGGCCATGGTTCGCTTGGCAGTGGGCAACCGCATTGTGACTGTTAGTGAGTATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS GCA 72 bp | ACATGGCCTGGCTTCGAGGTGTGGCTATCAAACTCCTaGTGGGAAACAGGCCGCAGGCAATACTCACTAACA | + |
|
Preference number: 6 (lower is better) Translates to: TWPGFEVWLSNS*WETGRRQYSLT Trigger: TGTTAGTGAGTATTGCCTGCGGCCTGTTTCCCAGCAGGAGTTTGATAGCCACACCTCGAAGCCAGGCCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS GCA 72 bp | TCAATGAACCGCACACGTAGGTCCCTGTGCAACCAGTaGTTGTTTCTAGGGGCTGCTTTCTCAGTCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SMNRTRRSLCNQ*LFLGAAFSVLG Trigger: GCCCAAGACTGAGAAAGCAGCCCCTAGAAACAAGCACTGGTTGCACAGGGACCTACGTGTGCGGTTCATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049896.13 ENSMUST00000154562.2 |
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| CDS CAA 90 bp | TGTTCTGTGGAAGTTTGGCTCACATGGCTAACAGTCACAATGCGGTaGCCCACTGCCAAGCGAACCATGGCCCGTACGTTGTCAGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: CSVEVWLTWLTVTMR*PTAKRTMARTLSGS Trigger: AGATCCTGACAACGTACGGGCCATGGTTCGCTTGGCAGTGGGCAACCGCATTGTGACTGTTAGCCATGTGAGCCAAACTTCCACAGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154562.2 |
||
| CDS GCA 72 bp | GTTTCTGAGGATGGCTTAGGGTTCTTGGACAGAGGTTaGCTGCGAGAGCCATTCTGGATCAACGGGATAACC | + |
|
Preference number: 6 (lower is better) Translates to: VSEDGLGFLDRG*LREPFWINGIT Trigger: GGTTATCCCGTTGATCCAGAATGGCTCTCGCAGGCAACCTCTGTCCAAGAACCCTAAGCCATCCTCAGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
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| CDS CAA 72 bp | AACACGGTGCTAGTTTCTGAGGATGGCTTAGGGTTCTaGGACAGAGGTTGCCTGCGAGAGCCATTCTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: NTVLVSEDGLGF*DRGCLREPFWI Trigger: GATCCAGAATGGCTCTCGCAGGCAACCTCTGTCCAAGAACCCTAAGCCATCCTCAGAAACTAGCACCGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS CAA 90 bp | TCTGACATCAACACGGTGCTAGTTTCTGAGGATGGCTTAGGGTTCTaGGACAGAGGTTGCCTGCGAGAGCCATTCTGGATCAACGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: SDINTVLVSEDGLGF*DRGCLREPFWINGI Trigger: TATCCCGTTGATCCAGAATGGCTCTCGCAGGCAACCTCTGTCCAAGAACCCTAAGCCATCCTCAGAAACTAGCACCGTGTTGATGTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS TCA 72 bp | GAAAGGACAACCACAGCTCTTCCATGCATCAGCCCTTaGGGTTGGCCTTCCTTATCATTCTCTCGATCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ERTTTALPCISP*GWPSLSFSRSP Trigger: TGGGGATCGAGAGAATGATAAGGAAGGCCAACCTCAAGGGCTGATGCATGGAAGAGCTGTGGTTGTCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS CCA 72 bp | CTGTCTGATCCTTCCTCAATGGGAGTACATCCTTTCTaGATCATGGGGATAGTGAGCGTGGGGTCAACACCT | + |
|
Preference number: 6 (lower is better) Translates to: LSDPSSMGVHPF*IMGIVSVGSTP Trigger: AGGTGTTGACCCCACGCTCACTATCCCCATGATCCAGAAAGGATGTACTCCCATTGAGGAAGGATCAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS CCA 72 bp | GCTCTGTTTTGTTGTTCTGTGGAAGTTTGGCTCACATaGCCTGGCTTCGAGGTGTGGCTATCAAACTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALFCCSVEVWLT*PGFEVWLSNSC Trigger: GCAGGAGTTTGATAGCCACACCTCGAAGCCAGGCCATGTGAGCCAAACTTCCACAGAACAACAAAACAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049896.13 |
||
| CDS TCA 72 bp | TTCTCCGAACCCTTTTGCCTCCTCTTTGAGTCTTCCTaGTTCTGTGCAGCCTTCAATGACGAGGCTGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSEPFCLLFESS*FCAAFNDEAVP Trigger: TGGAACAGCCTCGTCATTGAAGGCTGCACAGAATCAGGAAGACTCAAAGAGGAGGCAAAAGGGTTCGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049896.13 ENSMUST00000154562.2 |
||
| CDS TCA 72 bp | TGTTATAATAGCGGCCACTCTTGTGTAGTTTGTCAATaGACCGCACACGTAGGTCCCTGTGCAACCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CYNSGHSCVVCQ*TAHVGPCATSA Trigger: AGCACTGGTTGCACAGGGACCTACGTGTGCGGTTCATTGACAAACTACACAAGAGTGGCCGCTATTATAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049896.13 ENSMUST00000154562.2 |
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| CDS CCA 72 bp | GTTCCAGTTGCTCTGTTTTGTTGTTCTGTGGAAGTTTaGCTCACATGGCTAACAGTCACAATGCGGTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: VPVALFCCSVEV*LTWLTVTMRLP Trigger: GGGCAACCGCATTGTGACTGTTAGCCATGTGAGCCAAACTTCCACAGAACAACAAAACAGAGCAACTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154562.2 |
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| CDS CAA 72 bp | GATTCTGTGCAGCCTTCAATGACGAGGCTGTTCCAGTaGCTCTGTTTTGTTGTTCTGTGGAAGTTTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: DSVQPSMTRLFQ*LCFVVLWKFGS Trigger: TGAGCCAAACTTCCACAGAACAACAAAACAGAGCAACTGGAACAGCCTCGTCATTGAAGGCTGCACAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049896.13 ENSMUST00000154562.2 |
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| CDS CAA 72 bp | TGTTCCAGTTGCTCTGTTTTGTTGTTCTGTGGAAGTTaGGCTCACATGGCTAACAGTCACAATGCGGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: CSSCSVLLFCGS*AHMANSHNAVA Trigger: GGCAACCGCATTGTGACTGTTAGCCATGTGAGCCAAACTTCCACAGAACAACAAAACAGAGCAACTGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154562.2 |
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| CDS CCA 72 bp | ATGTGTCTGGGCTCAGGACATCTTCAATTGTCATCTTaGTGTTATAATAGCGGCCACTCTTGTGTAGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: MCLGSGHLQLSS*CYNSGHSCVVC Trigger: ACAAACTACACAAGAGTGGCCGCTATTATAACACCAAGATGACAATTGAAGATGTCCTGAGCCCAGACACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049896.13 ENSMUST00000154562.2 |
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