Pregenerated sensors for GPIHBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022579Ensembl transcript IDs: ENSMUST00000023243.11, ENSMUST00000189874.2, ENSMUST00000189944.7
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTTGGCCCATGTGCAGCCAGGATCCCTGCCCACTCAAGGAGGGATaGACACCTCCTGGGGGCCTCTCCTCACCAGAGATACCCATCCAC | + |
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Preference number: 1 (lower is better) Translates to: GWPMCSQDPCPLKEG*TPPGGLSSPEIPIH Trigger: GTGGATGGGTATCTCTGGTGAGGAGAGGCCCCCAGGAGGTGTGCATCCCTCCTTGAGTGGGCAGGGATCCTGGCTGCACATGGGCCAACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 90 bp | GAGCCATACCCAATCAAGGGTTGGCCCATGTGCAGCCAGGATCCCTaGCCACTCAAGGAGGGATGCACACCTCCTGGGGGCCTCTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: EPYPIKGWPMCSQDP*PLKEGCTPPGGLSS Trigger: TGAGGAGAGGCCCCCAGGAGGTGTGCATCCCTCCTTGAGTGGGCAGGGATCCTGGCTGCACATGGGCCAACCCTTGATTGGGTATGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR TCA 90 bp | GCTGGATCTGAGGCTGACATGTTACCCACACTGCTGCCCATGGGTTaGGGAGAGAGGAAGGCCAGGAGGCCTGAGGGTGAAACTGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: AGSEADMLPTLLPMG*GERKARRPEGETEG Trigger: GCCCTCAGTTTCACCCTCAGGCCTCCTGGCCTTCCTCTCTCCTCAACCCATGGGCAGCAGTGTGGGTAACATGTCAGCCTCAGATCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 90 bp | ACAGGCGATAGACAGCTGGATCTGAGGCTGACATGTTACCCACACTaGTGCCCATGGGTTGAGGAGAGAGGAAGGCCAGGAGGCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: TGDRQLDLRLTCYPH*CPWVEERGRPGGLR Trigger: CCTCAGGCCTCCTGGCCTTCCTCTCTCCTCAACCCATGGGCAGCAGTGTGGGTAACATGTCAGCCTCAGATCCAGCTGTCTATCGCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CCA 90 bp | CCCTGCCTTAGCTGCAGTCACTGTACCTCAGCCCTGCAATATTCTTaGATTCCTTCCAACACCCCCTCCCTCCAGGTCTCCGGAGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: PCLSCSHCTSALQYS*IPSNTPSLQVSGGS Trigger: TGAGCCTCCGGAGACCTGGAGGGAGGGGGTGTTGGAAGGAATCCAAGAATATTGCAGGGCTGAGGTACAGTGACTGCAGCTAAGGCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 90 bp | TGTCTGCCTAAGGAGCCCTGGGGACTTTTTGGCATTTCCCAGACCTaGTGTCCATTTCAGGCTCCCAGAATCCTCCCGGAGGCCTACACT | + |
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Preference number: 1 (lower is better) Translates to: CLPKEPWGLFGISQT*CPFQAPRILPEAYT Trigger: AGTGTAGGCCTCCGGGAGGATTCTGGGAGCCTGAAATGGACAGCAGGTCTGGGAAATGCCAAAAAGTCCCCAGGGCTCCTTAGGCAGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CCA 90 bp | GAGAGGAAGGCCAGGAGGCCTGAGGGTGAAACTGAGGGCAGAGAATaGCCGAAGGAGCTGCAACGAGCTAGATGGCAAACGACATTCAAG | + |
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Preference number: 1 (lower is better) Translates to: ERKARRPEGETEGRE*PKELQRARWQTTFK Trigger: CTTGAATGTCGTTTGCCATCTAGCTCGTTGCAGCTCCTTCGGCCATTCTCTGCCCTCAGTTTCACCCTCAGGCCTCCTGGCCTTCCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 90 bp | GATACCCATCCACCCAGGCGAGAATGGGTGTGTCGTCTATTTGTCTaGCTAAGGAGCCCTGGGGACTTTTTGGCATTTCCCAGACCTGCT | + |
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Preference number: 1 (lower is better) Translates to: DTHPPRREWVCRLFV*LRSPGDFLAFPRPA Trigger: AGCAGGTCTGGGAAATGCCAAAAAGTCCCCAGGGCTCCTTAGGCAGACAAATAGACGACACACCCATTCTCGCCTGGGTGGATGGGTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 90 bp | TCTTGCAACACTGAGCTACTGGGGACCCAGGAGTCCCTTAAGCCATaGTCCTTGTTGCACTGTGGGGAAACTGAGTTCCATCCAAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: SCNTELLGTQESLKP*SLLHCGETEFHPSQ Trigger: CTGACTTGGATGGAACTCAGTTTCCCCACAGTGCAACAAGGAGCATGGCTTAAGGGACTCCTGGGTCCCCAGTAGCTCAGTGTTGCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CCA 90 bp | TATTGGTGTTCCAGAACTTTTTCCCATGTTCCCTTACCATCCTCATaGTGTTACCTTGTAGTAGAAAGGGCTGCTGCATTCCCGTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: YWCSRTFSHVPLPSS*CYLVVERAAAFPSA Trigger: TGCTGACGGGAATGCAGCAGCCCTTTCTACTACAAGGTAACACCATGAGGATGGTAAGGGAACATGGGAAAAAGTTCTGGAACACCAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CCA 90 bp | CTAAGAAAGGGCATCCTGAGCTACACGGTACAATGTCTTGTTTATTaGTGTTCCAGAACTTTTTCCCATGTTCCCTTACCATCCTCATGG | + |
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Preference number: 1 (lower is better) Translates to: LRKGILSYTVQCLVY*CSRTFSHVPLPSSW Trigger: CCATGAGGATGGTAAGGGAACATGGGAAAAAGTTCTGGAACACCAATAAACAAGACATTGTACCGTGTAGCTCAGGATGCCCTTTCTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGGGACCCAGGAGTCCCTTAAGCCATGCTCCTTGTTGCACTGTGGGGAAACTCCACTCAAGGAGGGATaGACACCTCCTGGGGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LGTQESLKPCSLLHCGETPLKEG*TPPGGL Trigger: GAGGCCCCCAGGAGGTGTGCATCCCTCCTTGAGTGG...AGTTTCCCCACAGTGCAACAAGGAGCATGGCTTAAGGGACTCCTGGGTCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCCAGAGCTCTGCTCTGGCACCAACTGCTGGTGGAGGTCTAGCTTGGTGCAGAAGGGTTGGCCCATGTaGAGCCAGGATCCCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: IPELCSGTNCWWRSSLVQKGWPM*SQDPCP Trigger: TGGGCAGGGATCCTGGCTGCACATGGGCCAACCCTT...CTGCACCAAGCTAGACCTCCACCAGCAGTTGGTGCCAGAGCAGAGCTCTGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGAGTCCCTTAAGCCATGCTCCTTGTTGCACTGTGGGGAAACTGAGTTCCCTGCTGCCCATGGGTTaGGGAGAGAGGAAGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PRSPLSHAPCCTVGKLSSLLPMG*GERKAR Trigger: CCTGGCCTTCCTCTCTCCTCAACCCATGGGCAGCAG...GGAACTCAGTTTCCCCACAGTGCAACAAGGAGCATGGCTTAAGGGACTCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCCAGAGCTCTGCTCTGGCACCAACTGCTGGTGGAGGTCTAGCTTGGTGCAGGCTTGTTACTCTCTCTaGGTAGCTGAGCAGATGGGG | + |
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Preference number: 2 (lower is better) Translates to: IPELCSGTNCWWRSSLVQACYSL*VAEQMG Trigger: CCCCATCTGCTCAGCTACGCAGAGAGAGTAACAAGC...CTGCACCAAGCTAGACCTCCACCAGCAGTTGGTGCCAGAGCAGAGCTCTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCATACCCAATCAAGGGTTGGCCCATGTGCAGCCAGGATCCCTGCCCACTCACTGCCTAAGGAGCCCTaGGGACTTTTTGGCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: SHTQSRVGPCAARIPAHSLPKEP*GLFGIS Trigger: GGAAATGCCAAAAAGTCCCCAGGGCTCCTTAGGCAG...TGAGTGGGCAGGGATCCTGGCTGCACATGGGCCAACCCTTGATTGGGTATGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CAA 90 bp | ATCCCAGAGCTCTGCTCTGGCACCAACTGCTGGTGGAGGTCTAGCTaGGTGCAGTCAAGGAAGCCAAGAGCTCAGCCAATAGGAGCCATA | + |
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Preference number: 2 (lower is better) Translates to: IPELCSGTNCWWRSS*VQSRKPRAQPIGAI Trigger: TATGGCTCCTATTGGCTGAGCTCTTGGCTTCCTTGACTGCACCAAGCTAGACCTCCACCAGCAGTTGGTGCCAGAGCAGAGCTCTGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CAA 90 bp | ACTGAGCTACTGGGGACCCAGGAGTCCCTTAAGCCATGCTCCTTGTaGCACTGTGGGGAAACTGAGTTCCATCCAAGTCAGCGATGGAAC | + |
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Preference number: 2 (lower is better) Translates to: TELLGTQESLKPCSL*HCGETEFHPSQRWN Trigger: GTTCCATCGCTGACTTGGATGGAACTCAGTTTCCCCACAGTGCAACAAGGAGCATGGCTTAAGGGACTCCTGGGTCCCCAGTAGCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCTCATGGTGTTACCTTGTAGTAGAAAGGGCTGCTGCATTCCCGTCAGCAGGGGACAGAGGAAGAGTTaGCTCCTCCACCCAAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: ILMVLPCSRKGCCIPVSRGQRKS*LLHPRA Trigger: AGCCCTTGGGTGGAGGAGGCAACTCTTCCTCTGTCC...CCTGCTGACGGGAATGCAGCAGCCCTTTCTACTACAAGGTAACACCATGAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCTCATGGTGTTACCTTGTAGTAGAAAGGGCTGCTGCATTCCCGTCAGCAGGCCACACTGCTGCCCATaGGTTGAGGAGAGAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: ILMVLPCSRKGCCIPVSRPHCCP*VEERGR Trigger: CCTTCCTCTCTCCTCAACCCATGGGCAGCAGTGTGG...CCTGCTGACGGGAATGCAGCAGCCCTTTCTACTACAAGGTAACACCATGAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATGGTGTTACCTTGTAGTAGAAAGGGCTGCTGCATTCCCGTCAGCAGGAAGGCCCTGGGGACTTTTTaGCATTTCCCAGACCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LMVLPCSRKGCCIPVSRKALGTF*HFPDLL Trigger: CAGCAGGTCTGGGAAATGCCAAAAAGTCCCCAGGGC...CTTCCTGCTGACGGGAATGCAGCAGCCCTTTCTACTACAAGGTAACACCATGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCTAAGAAAGGGCATCCTGAGCTACACGGTACAATGTCTTGTTTATTGGCTCTCTCTGCGTAGCTaGGCAGATGGGGCCCCTATA | + |
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Preference number: 2 (lower is better) Translates to: PLLRKGILSYTVQCLVYWLSLRS*ADGAPI Trigger: TATAGGGGCCCCATCTGCTCAGCTACGCAGAGAGAG...CCAATAAACAAGACATTGTACCGTGTAGCTCAGGATGCCCTTTCTTAGGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCCAGAGCTCTGCTCTGGCACCAACTGCTGGTGGAGGTCTAGCTTGGTGCAGACTGTACCTCAGCCCTaGAATATTCTTGGATTCCTT | + |
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Preference number: 2 (lower is better) Translates to: IPELCSGTNCWWRSSLVQTVPQP*NILGFL Trigger: AAGGAATCCAAGAATATTGCAGGGCTGAGGTACAGT...CTGCACCAAGCTAGACCTCCACCAGCAGTTGGTGCCAGAGCAGAGCTCTGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGACCCAGGAGTCCCTTAAGCCATGCTCCTTGTTGCACTGTGGGGAAACTGAATCCAGAAAAGGATaGATTTCTGTGCCAGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LGTQESLKPCSLLHCGETESRKG*ISVPGC Trigger: ACAGCCTGGCACAGAAATCCATCCTTTTCTGGATTC...AGTTTCCCCACAGTGCAACAAGGAGCATGGCTTAAGGGACTCCTGGGTCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTCCTAAGAAAGGGCATCCTGAGCTACACGGTACAATGTCTTGTTTATTGGTCTATCCCAGAGCTCTaGTCTGGCACCAACTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PLLRKGILSYTVQCLVYWSIPEL*SGTNCW Trigger: CCAGCAGTTGGTGCCAGAGCAGAGCTCTGGGATAGA...CCAATAAACAAGACATTGTACCGTGTAGCTCAGGATGCCCTTTCTTAGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAAGCCATGCTCCTTGTTGCACTGTGGGGAAACTGAGTTCCATCCAAGTCAGGGTGGAGGTCTAGCTTaGTGCAGTCAAGGAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LKPCSLLHCGETEFHPSQGGGLA*CSQGSQ Trigger: TTGGCTTCCTTGACTGCACCAAGCTAGACCTCCACC...CTGACTTGGATGGAACTCAGTTTCCCCACAGTGCAACAAGGAGCATGGCTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCTAAGAAAGGGCATCCTGAGCTACACGGTACAATGTCTTGTTTATTGGACTTCCTCTAGATGTTaGCTCTGGGGAAGATTCTCG | + |
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Preference number: 2 (lower is better) Translates to: PLLRKGILSYTVQCLVYWTSSRC*LWGRFS Trigger: CGAGAATCTTCCCCAGAGCCAACATCTAGAGGAAGT...CCAATAAACAAGACATTGTACCGTGTAGCTCAGGATGCCCTTTCTTAGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CAA 90 bp | TTATTAACAGGAAATCGAGAGATAAGGTTTGCTAGGGGTTTCTTATaGCACATCAACAAACAGACGTGGCTTTTTGGAAAGGCCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: LLTGNREIRFARGFL*HINKQTWLFGKASR Trigger: TCTAGAGGCCTTTCCAAAAAGCCACGTCTGTTTGTTGATGTGCAATAAGAAACCCCTAGCAAACCTTATCTCTCGATTTCCTGTTAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 72 bp | CCAATCAAGGGTTGGCCCATGTGCAGCCAGGATCCCTaGCCACTCAAGGAGGGATGCACACCTCCTGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: PIKGWPMCSQDP*PLKEGCTPPGG Trigger: GCCCCCAGGAGGTGTGCATCCCTCCTTGAGTGGGCAGGGATCCTGGCTGCACATGGGCCAACCCTTGATTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CCA 72 bp | GGATCCCTGCCCACTCAAGGAGGGATGCACACCTCCTaGGGGCCTCTCCTCACCAGAGATACCCATCCACCC | + |
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Preference number: 3 (lower is better) Translates to: GSLPTQGGMHTS*GPLLTRDTHPP Trigger: GGGTGGATGGGTATCTCTGGTGAGGAGAGGCCCCCAGGAGGTGTGCATCCCTCCTTGAGTGGGCAGGGATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 72 bp | ATGTGCAGCCAGGATCCCTGCCCACTCAAGGAGGGATaGACACCTCCTGGGGGCCTCTCCTCACCAGAGATA | + |
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Preference number: 3 (lower is better) Translates to: MCSQDPCPLKEG*TPPGGLSSPEI Trigger: TATCTCTGGTGAGGAGAGGCCCCCAGGAGGTGTGCATCCCTCCTTGAGTGGGCAGGGATCCTGGCTGCACAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR TCA 72 bp | GAGGCTGACATGTTACCCACACTGCTGCCCATGGGTTaGGGAGAGAGGAAGGCCAGGAGGCCTGAGGGTGAA | + |
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Preference number: 3 (lower is better) Translates to: EADMLPTLLPMG*GERKARRPEGE Trigger: TTCACCCTCAGGCCTCCTGGCCTTCCTCTCTCCTCAACCCATGGGCAGCAGTGTGGGTAACATGTCAGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CCA 72 bp | GCCAGGAGGCCTGAGGGTGAAACTGAGGGCAGAGAATaGCCGAAGGAGCTGCAACGAGCTAGATGGCAAACG | + |
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Preference number: 3 (lower is better) Translates to: ARRPEGETEGRE*PKELQRARWQT Trigger: CGTTTGCCATCTAGCTCGTTGCAGCTCCTTCGGCCATTCTCTGCCCTCAGTTTCACCCTCAGGCCTCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 72 bp | AAGGAGCCCTGGGGACTTTTTGGCATTTCCCAGACCTaGTGTCCATTTCAGGCTCCCAGAATCCTCCCGGAG | + |
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Preference number: 3 (lower is better) Translates to: KEPWGLFGISQT*CPFQAPRILPE Trigger: CTCCGGGAGGATTCTGGGAGCCTGAAATGGACAGCAGGTCTGGGAAATGCCAAAAAGTCCCCAGGGCTCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 72 bp | CTCCCTGCCTTAGCTGCAGTCACTGTACCTCAGCCCTaGAATATTCTTGGATTCCTTCCAACACCCCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LPALAAVTVPQP*NILGFLPTPPP Trigger: GGGAGGGGGTGTTGGAAGGAATCCAAGAATATTGCAGGGCTGAGGTACAGTGACTGCAGCTAAGGCAGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 72 bp | CCACCCAGGCGAGAATGGGTGTGTCGTCTATTTGTCTaGCTAAGGAGCCCTGGGGACTTTTTGGCATTTCCC | + |
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Preference number: 3 (lower is better) Translates to: PPRREWVCRLFV*LRSPGDFLAFP Trigger: GGGAAATGCCAAAAAGTCCCCAGGGCTCCTTAGGCAGACAAATAGACGACACACCCATTCTCGCCTGGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 72 bp | TGGGGACCCAGGAGTCCCTTAAGCCATGCTCCTTGTTaGACTGTGGGGAAACTGAGTTCCATCCAAGTCAGC | + |
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Preference number: 3 (lower is better) Translates to: WGPRSPLSHAPC*TVGKLSSIQVS Trigger: GCTGACTTGGATGGAACTCAGTTTCCCCACAGTGCAACAAGGAGCATGGCTTAAGGGACTCCTGGGTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CCA 72 bp | AGCTGCAGTCACTGTACCTCAGCCCTGCAATATTCTTaGATTCCTTCCAACACCCCCTCCCTCCAGGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: SCSHCTSALQYS*IPSNTPSLQVS Trigger: GGAGACCTGGAGGGAGGGGGTGTTGGAAGGAATCCAAGAATATTGCAGGGCTGAGGTACAGTGACTGCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CCA 72 bp | TCTATCCCAGAGCTCTGCTCTGGCACCAACTGCTGGTaGAGGTCTAGCTTGGTGCAGTCAAGGAAGCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: SIPELCSGTNCW*RSSLVQSRKPR Trigger: TCTTGGCTTCCTTGACTGCACCAAGCTAGACCTCCACCAGCAGTTGGTGCCAGAGCAGAGCTCTGGGATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 72 bp | TCTCCTCCTAAGCAGTCAGGCTTTCTTTACCCTTTCTaGCTCCCTCCCTGCCTTAGCTGCAGTCACTGTACC | + |
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Preference number: 3 (lower is better) Translates to: SPPKQSGFLYPF*LPPCLSCSHCT Trigger: GGTACAGTGACTGCAGCTAAGGCAGGGAGGGAGGCAGAAAGGGTAAAGAAAGCCTGACTGCTTAGGAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 72 bp | ACTGAGCTACTGGGGACCCAGGAGTCCCTTAAGCCATaGTCCTTGTTGCACTGTGGGGAAACTGAGTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: TELLGTQESLKP*SLLHCGETEFH Trigger: ATGGAACTCAGTTTCCCCACAGTGCAACAAGGAGCATGGCTTAAGGGACTCCTGGGTCCCCAGTAGCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCTCCTAAGAAAGGGCATCCTGAGCTACACGGTACAATGTCTTGTTTATTGGACTGCTGCCCATGGGTaGAGGAGAGAGGAAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: PLLRKGILSYTVQCLVYWTAAHG*RREEGQ Trigger: CTGGCCTTCCTCTCTCCTCAACCCATGGGCAGCAGT...CCAATAAACAAGACATTGTACCGTGTAGCTCAGGATGCCCTTTCTTAGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CCA 72 bp | CACTGTGGGGAAACTGAGTTCCATCCAAGTCAGCGATaGAACAGTGGCCTAGGCATGGTCTCCTTCCTCTAT | + |
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Preference number: 3 (lower is better) Translates to: HCGETEFHPSQR*NSGLGMVSFLY Trigger: ATAGAGGAAGGAGACCATGCCTAGGCCACTGTTCCATCGCTGACTTGGATGGAACTCAGTTTCCCCACAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CCA 72 bp | GCCTCTAGACTTCTAGTTCTTGCAACACTGAGCTACTaGGGACCCAGGAGTCCCTTAAGCCATGCTCCTTGT | + |
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Preference number: 3 (lower is better) Translates to: ASRLLVLATLSY*GPRSPLSHAPC Trigger: ACAAGGAGCATGGCTTAAGGGACTCCTGGGTCCCCAGTAGCTCAGTGTTGCAAGAACTAGAAGTCTAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 72 bp | ATCCTCATGGTGTTACCTTGTAGTAGAAAGGGCTGCTaGATTCCCGTCAGCAGGAAGGAGAAAGGGGACAGA | + |
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Preference number: 3 (lower is better) Translates to: ILMVLPCSRKGC*IPVSRKEKGDR Trigger: TCTGTCCCCTTTCTCCTTCCTGCTGACGGGAATGCAGCAGCCCTTTCTACTACAAGGTAACACCATGAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR-3UTR CAA 90 bp | CTCATGGTGTTACCTTGTAGTAGAAAGGGCTGCTGCATTCCCGTCAGCAGGAAGGCTAGGGGTTTCTTATaGCACATCAACAAACAGACG | + |
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Preference number: 3 (lower is better) Translates to: LMVLPCSRKGCCIPVSRKARGFL*HINKQT Trigger: CGTCTGTTTGTTGATGTGCAATAAGAAACCCCTAGC...CTTCCTGCTGACGGGAATGCAGCAGCCCTTTCTACTACAAGGTAACACCATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR GCA 72 bp | ACTTCCTCTAGATGTTGGCTCTGGGGAAGATTCTCGTaGCGGCAAATTCAAGATGAGAATGAGCCTTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: TSSRCWLWGRFS*RQIQDENEPSR Trigger: CCTAGAAGGCTCATTCTCATCTTGAATTTGCCGGCACGAGAATCTTCCCCAGAGCCAACATCTAGAGGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CCA 72 bp | TACACTAGAAGGGAGGTCCTAGAATCCAGAAAAGGATaGATTTCTGTGCCAGGCTGTAGCTGGAGAATCTCC | + |
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Preference number: 3 (lower is better) Translates to: YTRREVLESRKG*ISVPGCSWRIS Trigger: GGAGATTCTCCAGCTACAGCCTGGCACAGAAATCCATCCTTTTCTGGATTCTAGGACCTCCCTTCTAGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CCA 72 bp | TCCAGAACTTTTTCCCATGTTCCCTTACCATCCTCATaGTGTTACCTTGTAGTAGAAAGGGCTGCTGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: SRTFSHVPLPSS*CYLVVERAAAF Trigger: GAATGCAGCAGCCCTTTCTACTACAAGGTAACACCATGAGGATGGTAAGGGAACATGGGAAAAAGTTCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| 3UTR CCA 72 bp | GGCATCCTGAGCTACACGGTACAATGTCTTGTTTATTaGTGTTCCAGAACTTTTTCCCATGTTCCCTTACCA | + |
|
Preference number: 3 (lower is better) Translates to: GILSYTVQCLVY*CSRTFSHVPLP Trigger: TGGTAAGGGAACATGGGAAAAAGTTCTGGAACACCAATAAACAAGACATTGTACCGTGTAGCTCAGGATGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAGCTGGTTGTCAGGAAGGAGAGGCCAGGGCGTCCTGGTTGGAGGAGAACGGAGCAGCTCTGTGTCTaGTTGCAGCTCTCCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKLVVRKERPGRPGWRRTEQLCV*LQLSPL Trigger: CAGCGGGGAGAGCTGCAATCAGACACAGAGCTGCTC...CGTTCTCCTCCAACCAGGACGCCCTGGCCTCTCCTTCCTGACAACCAGCTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
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| CDS-3UTR CCA 90 bp | AAGCTGGTTGTCAGGAAGGAGAGGCCAGGGCGTCCTGGTTGGAGGAGAACGGGTCCACCCAGAGGGTTCTaGACTTGGGGGTTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLVVRKERPGRPGWRRTGPPRGF*TWGFCQ Trigger: CTGGCAGAACCCCCAAGTCCAGAACCCTCTGGGTGG...ACCCGTTCTCCTCCAACCAGGACGCCCTGGCCTCTCCTTCCTGACAACCAGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
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| CDS-3UTR GCA 90 bp | AGCTGGTTGTCAGGAAGGAGAGGCCAGGGCGTCCTGGTTGGAGGAGAACGGGTCGCCAGGGTGGAATATTaGACAGTGTGGACTGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SWLSGRRGQGVLVGGERVARVEY*TVWTGN Trigger: GTTGCCAGTCCACACTGTGCAATATTCCACCCTGGC...GACCCGTTCTCCTCCAACCAGGACGCCCTGGCCTCTCCTTCCTGACAACCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
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| CDS-3UTR GCA 90 bp | GCATTTCCCAGACCTGCTGTCCATTTCAGGCTCCCAGAATCCTCCCGGAGGCCTGAGGTGCTCTGTCCCTaGTTCCAGGGATCATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AFPRPAVHFRLPESSRRPEVLCP*FQGSCW Trigger: CCAACATGATCCCTGGAAGCAGGGACAGAGCACCTC...AGGCCTCCGGGAGGATTCTGGGAGCCTGAAATGGACAGCAGGTCTGGGAAATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
||
| 3UTR CAA 72 bp | AGAGCTCAGCCAATAGGAGCCATACCCAATCAAGGGTaGGCCCATGTGCAGCCAGGATCCCTGCCCACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RAQPIGAIPNQG*AHVQPGSLPTQ Trigger: TTGAGTGGGCAGGGATCCTGGCTGCACATGGGCCAACCCTTGATTGGGTATGGCTCCTATTGGCTGAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTCAAGGAAGCCAAGAGCTCAGCCAATAGGAGCCATACCCAATCAAGGGTTGAGCAGCTCTGTGTCTaGTTGCAGCTCTCCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVKEAKSSANRSHTQSRVEQLCV*LQLSPL Trigger: CAGCGGGGAGAGCTGCAATCAGACACAGAGCTGCTC...AACCCTTGATTGGGTATGGCTCCTATTGGCTGAGCTCTTGGCTTCCTTGACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
||
| 3UTR CAA 72 bp | CTCTGCTCTGGCACCAACTGCTGGTGGAGGTCTAGCTaGGTGCAGTCAAGGAAGCCAAGAGCTCAGCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: LCSGTNCWWRSS*VQSRKPRAQPI Trigger: TATTGGCTGAGCTCTTGGCTTCCTTGACTGCACCAAGCTAGACCTCCACCAGCAGTTGGTGCCAGAGCAGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| CDS-3UTR CCA 90 bp | GGCAAACGACATTCAAGTTTATTCTCTGAAGCTGGTTGTCAGGAAGGAGAGGCCCCTGCCCCACTTCCCTaGGGCTGGTTAGCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKRHSSLFSEAGCQEGEAPAPLP*GWLALP Trigger: TGGCAAGGCTAACCAGCCCCAGGGAAGTGGGGCAGG...GGCCTCTCCTTCCTGACAACCAGCTTCAGAGAATAAACTTGAATGTCGTTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| 3UTR CAA 72 bp | CTACTGGGGACCCAGGAGTCCCTTAAGCCATGCTCCTaGTTGCACTGTGGGGAAACTGAGTTCCATCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGTQESLKPCS*LHCGETEFHPS Trigger: ACTTGGATGGAACTCAGTTTCCCCACAGTGCAACAAGGAGCATGGCTTAAGGGACTCCTGGGTCCCCAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
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| CDS-3UTR GCA 90 bp | CGACATTCAAGTTTATTCTCTGAAGCTGGTTGTCAGGAAGGAGAGGCCAGGGCGGAGGTGCTCTGTCCCTaGTTCCAGGGATCATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RHSSLFSEAGCQEGEARAEVLCP*FQGSCW Trigger: CCAACATGATCCCTGGAAGCAGGGACAGAGCACCTC...CGCCCTGGCCTCTCCTTCCTGACAACCAGCTTCAGAGAATAAACTTGAATGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS-3UTR TCA 90 bp | CATTCAAGTTTATTCTCTGAAGCTGGTTGTCAGGAAGGAGAGGCCAGGGCGTCCAAATTTGGTCCAGCCTaGAGGGTATCCTGCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: HSSLFSEAGCQEGEARASKFGPA*RVSCPT Trigger: AGTGGGGCAGGATACCCTTCAGGCTGGACCAAATTT...GGACGCCCTGGCCTCTCCTTCCTGACAACCAGCTTCAGAGAATAAACTTGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS-3UTR CCA 90 bp | AAACGACATTCAAGTTTATTCTCTGAAGCTGGTTGTCAGGAAGGAGAGGCCAGGAGAGGGTTCTGGACTTaGGGGTTCTGCCAGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRHSSLFSEAGCQEGEARRGFWT*GFCQGG Trigger: TCCACCCTGGCAGAACCCCCAAGTCCAGAACCCTCT...CCTGGCCTCTCCTTCCTGACAACCAGCTTCAGAGAATAAACTTGAATGTCGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS-3UTR GCA 90 bp | TCTCGTGCCGGCAAATTCAAGATGAGAATGAGCCTTCTAGGCTTGTTACTCTCTATCACCATCTTCTTGTaGCCAGCCACTCCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAGKFKMRMSLLGLLLSITIFL*PATPWL Trigger: CAGCCAGGGAGTGGCTGGGCACAAGAAGATGGTGAT...AGAGAGTAACAAGCCTAGAAGGCTCATTCTCATCTTGAATTTGCCGGCACGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
||
| CDS-3UTR GCA 90 bp | ATGGCAAACGACATTCAAGTTTATTCTCTGAAGCTGGTTGTCAGGAAGGAGAGGATCACCATCTTCTTGTaGCCAGCCACTCCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MANDIQVYSLKLVVRKERITIFL*PATPWL Trigger: CAGCCAGGGAGTGGCTGGGCACAAGAAGATGGTGAT...CCTCTCCTTCCTGACAACCAGCTTCAGAGAATAAACTTGAATGTCGTTTGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS-3UTR CCA 90 bp | CTTAAGCCATGCTCCTTGTTGCACTGTGGGGAAACTGAGTTCCATCCAAGTCAGTTCCAGGGATCATGTTaGTCTCCTCCTCTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKPCSLLHCGETEFHPSQFQGSC*SPPLPL Trigger: AAGAGGAAGAGGAGGAGACCAACATGATCCCTGGAA...CTGACTTGGATGGAACTCAGTTTCCCCACAGTGCAACAAGGAGCATGGCTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
||
| CDS-3UTR CCA 90 bp | GCAAACGACATTCAAGTTTATTCTCTGAAGCTGGTTGTCAGGAAGGAGAGGCCATTCCAGGGATCATGTTaGTCTCCTCCTCTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ANDIQVYSLKLVVRKERPFQGSC*SPPLPL Trigger: AAGAGGAAGAGGAGGAGACCAACATGATCCCTGGAA...TGGCCTCTCCTTCCTGACAACCAGCTTCAGAGAATAAACTTGAATGTCGTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS-3UTR CCA 90 bp | CATTCAAGTTTATTCTCTGAAGCTGGTTGTCAGGAAGGAGAGGCCAGGGCGTCCCTATATTACCAAATTTaGTCCAGCCTGAAGGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: HSSLFSEAGCQEGEARASLYYQI*SSLKGI Trigger: GATACCCTTCAGGCTGGACCAAATTTGGTAATATAG...GGACGCCCTGGCCTCTCCTTCCTGACAACCAGCTTCAGAGAATAAACTTGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS TCA 90 bp | GAGGCCAGGGCGTCCTGGTTGGAGGAGAACGGGTCTTCAGGCCCCTaGCGCCCACAGACAAGTGAAGAAGCGGTTCCGCTGTGGGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: EARASWLEENGSSGP*RPQTSEEAVPLWET Trigger: CGTCTCCCACAGCGGAACCGCTTCTTCACTTGTCTGTGGGCGTCAGGGGCCTGAAGACCCGTTCTCCTCCAACCAGGACGCCCTGGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189944.7 |
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| CDS GCA 90 bp | CTTGCCACCCTGAGGATGTCTAGTCCCACTTTCCAGGGGGCTGTCTaGCCGGCCACCCAGAGGGTTCTGGACTTGGGGGTTCTGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LATLRMSSPTFQGAV*PATQRVLDLGVLPG Trigger: CCCTGGCAGAACCCCCAAGTCCAGAACCCTCTGGGTGGCCGGGCAGACAGCCCCCTGGAAAGTGGGACTAGACATCCTCAGGGTGGCAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS TCA 90 bp | GGAAGGAGAGGCCAGGGCGTCCGGTTCCGCTGTGGGAGACGAGCGTaGTGCAGAAGGGTTTGCTGCTGGAGCAGCTCTGTGTCTGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: GRRGQGVRFRCGRRA*CRRVCCWSSSVSDC Trigger: GCAATCAGACACAGAGCTGCTCCAGCAGCAAACCCTTCTGCATCACGCTCGTCTCCCACAGCGGAACCGGACGCCCTGGCCTCTCCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAGCTGGTTGTCAGGAAGGAGAGGCCAGGGCGTCCTGGTTGGAGGAGAACGCGCATCACCATCTTCTaGTGCCCAGCCACTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LKLVVRKERPGRPGWRRTRITIF*CPATPW Trigger: CCAGGGAGTGGCTGGGCACAAGAAGATGGTGATGCG...CGTTCTCCTCCAACCAGGACGCCCTGGCCTCTCCTTCCTGACAACCAGCTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
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| CDS-3UTR CAA 90 bp | ATCCCTGCCCACTCAAGGAGGGATGCACACCTCCTGGGGGCCTCTCCTCACCAGCTTCCAGGGATCATGTaGGTCTCCTCCTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IPAHSRRDAHLLGASPHQLPGIM*VSSSSS Trigger: AGAGGAAGAGGAGGAGACCAACATGATCCCTGGAAG...CTGGTGAGGAGAGGCCCCCAGGAGGTGTGCATCCCTCCTTGAGTGGGCAGGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
||
| CDS-3UTR CAA 90 bp | CTGGATCTGAGGCTGACATGTTACCCACACTGCTGCCCATGGGTTGAGGAGAGACGCATCACCATCTTCTaGTGCCCAGCCACTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LDLRLTCYPHCCPWVEERRITIF*CPATPW Trigger: CCAGGGAGTGGCTGGGCACAAGAAGATGGTGATGCG...TCTCTCCTCAACCCATGGGCAGCAGTGTGGGTAACATGTCAGCCTCAGATCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTGAAGCTGGTTGTCAGGAAGGAGAGGCCAGGGCGTCCTGGTTGGAGGAGATGCCAGGGTGGAATATaGCACAGTGTGGACTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SLKLVVRKERPGRPGWRRCQGGI*HSVDWQ Trigger: TTGCCAGTCCACACTGTGCAATATTCCACCCTGGCA...TCTCCTCCAACCAGGACGCCCTGGCCTCTCCTTCCTGACAACCAGCTTCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
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| CDS TCA 90 bp | GAAGAAGCTGAGCAGGAGGGCTATATTACCAAATTTGGTCCAGCCTaGAGGGTATCCTGCCCCACTTCCCTGGGGCTGGTTAGCCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EEAEQEGYITKFGPA*RVSCPTSLGLVSLA Trigger: GGCAAGGCTAACCAGCCCCAGGGAAGTGGGGCAGGATACCCTTCAGGCTGGACCAAATTTGGTAATATAGCCCTCCTGCTCAGCTTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
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| CDS-3UTR CAA 90 bp | ATTCAAGTTTATTCTCTGAAGCTGGTTGTCAGGAAGGAGAGGCCAGGGCGTCCTCTTCCAGGGATCATGTaGGTCTCCTCCTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IQVYSLKLVVRKERPGRPLPGIM*VSSSSS Trigger: AGAGGAAGAGGAGGAGACCAACATGATCCCTGGAAG...AGGACGCCCTGGCCTCTCCTTCCTGACAACCAGCTTCAGAGAATAAACTTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
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| CDS GCA 90 bp | TGTGAAGCACTTGACAGAAGTAGCATTGTAGAGGTGCTCTGTCCCTaGTTCCAGGGATCATGTTGGTCTCCTCCTCTTCCTCTTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: CEALDRSSIVEVLCP*FQGSCWSPPLPLHH Trigger: ATGATGAAGAGGAAGAGGAGGAGACCAACATGATCCCTGGAAGCAGGGACAGAGCACCTCTACAATGCTACTTCTGTCAAGTGCTTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023243.11 ENSMUST00000189874.2 ENSMUST00000189944.7 |
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| CDS-3UTR CAA 90 bp | GATGGCAAACGACATTCAAGTTTATTCTCTGAAGCTGGTTGTCAGGAAGGAGAGGTGATGCAGAAGGGTTaGCTGCTGGAGCAGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DGKRHSSLFSEAGCQEGEVMQKG*LLEQLC Trigger: ACAGAGCTGCTCCAGCAGCAAACCCTTCTGCATCAC...CTCTCCTTCCTGACAACCAGCTTCAGAGAATAAACTTGAATGTCGTTTGCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS TCA 72 bp | GGCCAGGGCGTCCGGTTCCGCTGTGGGAGACGAGCGTaGTGCAGAAGGGTTTGCTGCTGGAGCAGCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GQGVRFRCGRRA*CRRVCCWSSSV Trigger: CACAGAGCTGCTCCAGCAGCAAACCCTTCTGCATCACGCTCGTCTCCCACAGCGGAACCGGACGCCCTGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
||
| CDS CCA 72 bp | GTCAGGAAGGAGAGGCCAGGGCGTCCGGTTCCGCTGTaGGAGACGAGCGTGATGCAGAAGGGTTTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VRKERPGRPVPL*ETSVMQKGLLL Trigger: CAGCAGCAAACCCTTCTGCATCACGCTCGTCTCCCACAGCGGAACCGGACGCCCTGGCCTCTCCTTCCTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189874.2 |
||
| CDS TCA 72 bp | GCGTCCTGGTTGGAGGAGAACGGGTCTTCAGGCCCCTaGCGCCCACAGACAAGTGAAGAAGCGGTTCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASWLEENGSSGP*RPQTSEEAVPL Trigger: CAGCGGAACCGCTTCTTCACTTGTCTGTGGGCGTCAGGGGCCTGAAGACCCGTTCTCCTCCAACCAGGACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189944.7 |
||
| CDS GCA 72 bp | CTGAGGATGTCTAGTCCCACTTTCCAGGGGGCTGTCTaGCCGGCCACCCAGAGGGTTCTGGACTTGGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LRMSSPTFQGAV*PATQRVLDLGV Trigger: AACCCCCAAGTCCAGAACCCTCTGGGTGGCCGGGCAGACAGCCCCCTGGAAAGTGGGACTAGACATCCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS TCA 72 bp | GAACGGGTCTTCAGGCCCCTGACGCCCACAGACAAGTaGAGAAGCGGTTCCGCTGTGGGAGACGAGCGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: ERVFRPLTPTDK*RSGSAVGDERD Trigger: ATCACGCTCGTCTCCCACAGCGGAACCGCTTCTTCACTTGTCTGTGGGCGTCAGGGGCCTGAAGACCCGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189944.7 |
||
| CDS GCA 72 bp | GCCCGGCCACCCAGAGGGTTCTGGACTTGGGGGTTCTaGCAGGGTGGAATATTGCACAGTGTGGACTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ARPPRGFWTWGF*QGGILHSVDWQ Trigger: TTGCCAGTCCACACTGTGCAATATTCCACCCTGGCAGAACCCCCAAGTCCAGAACCCTCTGGGTGGCCGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS TCA 72 bp | GCCTTGACAACCTGGGGGTGGCTAAACTTGCCACCCTaGGGATGTCTAGTCCCACTTTCCAGGGGGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALTTWGWLNLPP*GCLVPLSRGLS Trigger: AGACAGCCCCCTGGAAAGTGGGACTAGACATCCTCAGGGTGGCAAGTTTAGCCACCCCCAGGTTGTCAAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS TCA 72 bp | CAAGTGAAGAAGCGGTTCCGCTGTGGGAGACGAGCGTaGTGCAGAAGGGTTTGCTGCTGGAGCAGCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QVKKRFRCGRRA*CRRVCCWSSSV Trigger: CACAGAGCTGCTCCAGCAGCAAACCCTTCTGCATCACGCTCGTCTCCCACAGCGGAACCGCTTCTTCACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189944.7 |
||
| CDS CCA 72 bp | TTGGTCCAGCCTGAAGGGTATCCTGCCCCACTTCCCTaGGGCTGGTTAGCCTTGCCACTCTTAGGCAAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LVQPEGYPAPLP*GWLALPLLGKL Trigger: TAACTTGCCTAAGAGTGGCAAGGCTAACCAGCCCCAGGGAAGTGGGGCAGGATACCCTTCAGGCTGGACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS TCA 72 bp | GAGCAGGAGGGCTATATTACCAAATTTGGTCCAGCCTaGAGGGTATCCTGCCCCACTTCCCTGGGGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: EQEGYITKFGPA*RVSCPTSLGLV Trigger: AACCAGCCCCAGGGAAGTGGGGCAGGATACCCTTCAGGCTGGACCAAATTTGGTAATATAGCCCTCCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS CAA 90 bp | CACAGACAAGTGAAGAAGCTGAGCAGGAGGGCTATATTACCAAATTaGGTCCAGCCTGAAGGGTATCCTGCCCCACTTCCCTGGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HRQVKKLSRRAILPN*VQPEGYPAPLPWGW Trigger: CCAGCCCCAGGGAAGTGGGGCAGGATACCCTTCAGGCTGGACCAAATTTGGTAATATAGCCCTCCTGCTCAGCTTCTTCACTTGTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS GCA 72 bp | AGAAGGGTTTGCTGCTGGAGCAGCTCTGTGTCTGATTaGAGCTCTCCCCGCTGTGAAGCACTTGACAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RRVCCWSSSVSD*SSPRCEALDRS Trigger: ACTTCTGTCAAGTGCTTCACAGCGGGGAGAGCTGCAATCAGACACAGAGCTGCTCCAGCAGCAAACCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023243.11 ENSMUST00000189874.2 ENSMUST00000189944.7 |
||
| CDS CAA 72 bp | GTGAAGAAGCTGAGCAGGAGGGCTATATTACCAAATTaGGTCCAGCCTGAAGGGTATCCTGCCCCACTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VKKLSRRAILPN*VQPEGYPAPLP Trigger: GGGAAGTGGGGCAGGATACCCTTCAGGCTGGACCAAATTTGGTAATATAGCCCTCCTGCTCAGCTTCTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023243.11 |
||
| CDS GCA 72 bp | CTTGACAGAAGTAGCATTGTAGAGGTGCTCTGTCCCTaGTTCCAGGGATCATGTTGGTCTCCTCCTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LDRSSIVEVLCP*FQGSCWSPPLP Trigger: AGGAAGAGGAGGAGACCAACATGATCCCTGGAAGCAGGGACAGAGCACCTCTACAATGCTACTTCTGTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023243.11 ENSMUST00000189874.2 ENSMUST00000189944.7 |
||
| CDS CCA 72 bp | CTCTTCATCATCGTCATCATCGTAGTTGTAGTTCTCTaGCTCCGGGTCCGCATCACCATCTTCTTGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LFIIVIIVVVVL*LRVRITIFLCP Trigger: TGGGCACAAGAAGATGGTGATGCGGACCCGGAGCCAGAGAACTACAACTACGATGATGACGATGATGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023243.11 ENSMUST00000189874.2 ENSMUST00000189944.7 |
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