Pregenerated sensors for GPER1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053647Ensembl transcript IDs: ENSMUST00000066211.5
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCCTGGTGCCCTTTGAGGTCAGAGGTCAATGTCACGTGGCCCGCTaGCTTGGGACCTTGAATCTGGATGGCAGCATCCATGAGCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: RLVPFEVRGQCHVAR*LGTLNLDGSIHELD Trigger: GTCCAGCTCATGGATGCTGCCATCCAGATTCAAGGTCCCAAGGCAGCGGGCCACGTGACATTGACCTCTGACCTCAAAGGGCACCAGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR CCA 90 bp | CACTCAGGAGTTAGGAGTGGCATCTGGGGTGACCTCACAGCCTTCTaGAAGACAGGAAGAAGGCTCTGGCTGCACTGGACGGTGTATACA | + |
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Preference number: 1 (lower is better) Translates to: HSGVRSGIWGDLTAF*KTGRRLWLHWTVYT Trigger: TGTATACACCGTCCAGTGCAGCCAGAGCCTTCTTCCTGTCTTCCAGAAGGCTGTGAGGTCACCCCAGATGCCACTCCTAACTCCTGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR CCA 90 bp | TTCTCAGTCAGACACGCTGTTCACTCAGGAGTTAGGAGTGGCATCTaGGGTGACCTCACAGCCTTCTGGAAGACAGGAAGAAGGCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: FSVRHAVHSGVRSGI*GDLTAFWKTGRRLW Trigger: CCAGAGCCTTCTTCCTGTCTTCCAGAAGGCTGTGAGGTCACCCCAGATGCCACTCCTAACTCCTGAGTGAACAGCGTGTCTGACTGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR GCA 90 bp | GGGGTGACCTCACAGCCTTCTGGAAGACAGGAAGAAGGCTCTGGCTaGACTGGACGGTGTATACATGGTCAGTTACACATCACAAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: GVTSQPSGRQEEGSG*TGRCIHGQLHITSK Trigger: TTTGCTTGTGATGTGTAACTGACCATGTATACACCGTCCAGTGCAGCCAGAGCCTTCTTCCTGTCTTCCAGAAGGCTGTGAGGTCACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR CCA 90 bp | ATCTGGGGTGACCTCACAGCCTTCTGGAAGACAGGAAGAAGGCTCTaGCTGCACTGGACGGTGTATACATGGTCAGTTACACATCACAAG | + |
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Preference number: 1 (lower is better) Translates to: IWGDLTAFWKTGRRL*LHWTVYTWSVTHHK Trigger: CTTGTGATGTGTAACTGACCATGTATACACCGTCCAGTGCAGCCAGAGCCTTCTTCCTGTCTTCCAGAAGGCTGTGAGGTCACCCCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR CCA 90 bp | GACCTCACAGCCTTCTGGAAGACAGGAAGAAGGCTCTGGCTGCACTaGACGGTGTATACATGGTCAGTTACACATCACAAGCAAAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: DLTAFWKTGRRLWLH*TVYTWSVTHHKQRE Trigger: TTCCCTTTGCTTGTGATGTGTAACTGACCATGTATACACCGTCCAGTGCAGCCAGAGCCTTCTTCCTGTCTTCCAGAAGGCTGTGAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR TCA 90 bp | TTTCACGTTTTAATGAGATCCATTTACAGCTCGCTGTTCCCAGTATaGTTTTCTGTGGTGGTAAGTCCTTCTACCACACATCTTATGGCG | + |
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Preference number: 1 (lower is better) Translates to: FHVLMRSIYSSLFPV*FSVVVSPSTTHLMA Trigger: CGCCATAAGATGTGTGGTAGAAGGACTTACCACCACAGAAAATCATACTGGGAACAGCGAGCTGTAAATGGATCTCATTAAAACGTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR-3UTR TCA 90 bp | CCACCAGCCTGCACAGCAGCACCCAGTCTCCTTCCACCTTCACGGAAGGGCAAAGGTGTGTGCAAGTCCTaGGCACCAGCCTGCGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: PPACTAAPSLLPPSRKGKGVCKS*APACAP Trigger: AGGGGCGCAGGCTGGTGCTCAGGACTTGCACACACC...TTTGCCCTTCCGTGAAGGTGGAAGGAGACTGGGTGCTGCTGTGCAGGCTGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAGACAGGAAGAAGGCTCTGGCTGCACTGGACGGTGTATACATGGTCAGTTACCGCCTGGTGCCCTTTaGGGTCAGAGGTCAATGTCA | + |
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Preference number: 2 (lower is better) Translates to: GRQEEGSGCTGRCIHGQLPPGAL*GQRSMS Trigger: TGACATTGACCTCTGACCTCAAAGGGCACCAGGCGG...TAACTGACCATGTATACACCGTCCAGTGCAGCCAGAGCCTTCTTCCTGTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR-3UTR GCA 90 bp | AGTCCTTCTACCACACATCTTATGGCGGCATCCCACCAGCCTGCACAGCAGCACAGGCATGTAACATGGTaGTCCCATAGCATGGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SPSTTHLMAASHQPAQQHRHVTW*SHSMAC Trigger: ACAGGCCATGCTATGGGAGCACCATGTTACATGCCT...GTGCTGCTGTGCAGGCTGGTGGGATGCCGCCATAAGATGTGTGGTAGAAGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR-3UTR CCA 90 bp | AACACCTTTGTAAACAAACTTTGTGAGAGGAGCATCCCAGAGCAGGAAGGCGTTAGCAGCAGGCCCGCCTaGTGCCCTTTGAGGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: NTFVNKLCERSIPEQEGVSSRPA*CPLRSE Trigger: CTCTGACCTCAAAGGGCACCAGGCGGGCCTGCTGCT...AACGCCTTCCTGCTCTGGGATGCTCCTCTCACAAAGTTTGTTTACAAAGGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTGTGGTGGTAAGTCCTTCTACCACACATCTTATGGCGGCATCCCACCAGAGCAGGCATGTAACATaGTGCTCCCATAGCATGGCC | + |
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Preference number: 2 (lower is better) Translates to: FSVVVSPSTTHLMAASHQSRHVT*CSHSMA Trigger: GGCCATGCTATGGGAGCACCATGTTACATGCCTGCT...CTGGTGGGATGCCGCCATAAGATGTGTGGTAGAAGGACTTACCACCACAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR-3UTR CCA 90 bp | GACACGCTGTTCACTCAGGAGTTAGGAGTGGCATCTGGGGTGACCTCACAGCCTTGGACGGTGTATACATaGTCAGTTACACATCACAAG | + |
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Preference number: 2 (lower is better) Translates to: DTLFTQELGVASGVTSQPWTVYT*SVTHHK Trigger: CTTGTGATGTGTAACTGACCATGTATACACCGTCCA...AGGCTGTGAGGTCACCCCAGATGCCACTCCTAACTCCTGAGTGAACAGCGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR CAA 90 bp | GTAAACAAACTTTGTGAGAGGAGCATCCCAGAGCAGGAAGGCGTTTaGTTAAAGGGCCTTTCTCAGTCAGACACGCTGTTCACTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VNKLCERSIPEQEGV*LKGLSQSDTLFTQE Trigger: CTCCTGAGTGAACAGCGTGTCTGACTGAGAAAGGCCCTTTAACAAAACGCCTTCCTGCTCTGGGATGCTCCTCTCACAAAGTTTGTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR GCA 72 bp | GCTATGGAAAGAAAGCCAAGCAGCAGGCCCGCCTGGTaGCCTTTGAGGTCAGAGGTCAATGTCACGTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: AMERKPSSRPAW*PLRSEVNVTWP Trigger: GGGCCACGTGACATTGACCTCTGACCTCAAAGGGCACCAGGCGGGCCTGCTGCTTGGCTTTCTTTCCATAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR GCA 72 bp | CCCTTTGAGGTCAGAGGTCAATGTCACGTGGCCCGCTaGCTTGGGACCTTGAATCTGGATGGCAGCATCCAT | + |
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Preference number: 3 (lower is better) Translates to: PFEVRGQCHVAR*LGTLNLDGSIH Trigger: ATGGATGCTGCCATCCAGATTCAAGGTCCCAAGGCAGCGGGCCACGTGACATTGACCTCTGACCTCAAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR-3UTR CAA 90 bp | CATGTAACATGGTGCTCCCATAGCATGGCCTGTCCTCGTATCAACAGCAGACTTCCCGCCTGGTGCCCTTaGAGGTCAGAGGTCAATGTC | + |
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Preference number: 3 (lower is better) Translates to: HVTWCSHSMACPRINSRLPAWCP*RSEVNV Trigger: GACATTGACCTCTGACCTCAAAGGGCACCAGGCGGG...AAGTCTGCTGTTGATACGAGGACAGGCCATGCTATGGGAGCACCATGTTACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR TCA 72 bp | GTGACGTCTTCCCCAAGCCACTGGGGTTTGAGAGTATaGCATAGCTTAGCCCACTCACCACCTGTGCTAGGT | + |
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Preference number: 3 (lower is better) Translates to: VTSSPSHWGLRV*HSLAHSPPVLG Trigger: ACCTAGCACAGGTGGTGAGTGGGCTAAGCTATGTCATACTCTCAAACCCCAGTGGCTTGGGGAAGACGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR CCA 72 bp | GCCTTCTGGAAGACAGGAAGAAGGCTCTGGCTGCACTaGACGGTGTATACATGGTCAGTTACACATCACAAG | + |
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Preference number: 3 (lower is better) Translates to: AFWKTGRRLWLH*TVYTWSVTHHK Trigger: CTTGTGATGTGTAACTGACCATGTATACACCGTCCAGTGCAGCCAGAGCCTTCTTCCTGTCTTCCAGAAGGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR CCA 72 bp | ATGGCCTGTCCTCGTATCAACAGCAGACTTGTGTTCTaGGAACGTAGGCTATGGAAAGAAAGCCAAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: MACPRINSRLVF*ERRLWKESQAA Trigger: TGCTGCTTGGCTTTCTTTCCATAGCCTACGTTCCCAGAACACAAGTCTGCTGTTGATACGAGGACAGGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR GCA 90 bp | TGGTGCCCTTTGAGGTCAGAGGTCAATGTCACGTGGCCCGCTGCCTTGGGACCTTCCGTGTGCCGCAGGTaGACCGCTGTGAAGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: WCPLRSEVNVTWPAALGPSVCRR*TAVKGT Trigger: GGTGCCCTTCACAGCGGTGCACCTGCGGCACACGGA...AGGTCCCAAGGCAGCGGGCCACGTGACATTGACCTCTGACCTCAAAGGGCACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR GCA 90 bp | AAGAAAGCCAAGCAGCAGGCCCGCCTGGTGCCCTTTGAGGTCAGAGGTCAATGTTCAGGGCTTTCTGCCTaGGTGGGCGCAGGCCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: KKAKQQARLVPFEVRGQCSGLSA*VGAGRG Trigger: ACCGCGGCCTGCGCCCACGCAGGCAGAAAGCCCTGA...ACATTGACCTCTGACCTCAAAGGGCACCAGGCGGGCCTGCTGCTTGGCTTTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR CAA 72 bp | GAAAGAAAGCCAAGCAGCAGGCCCGCCTGGTGCCCTTaGAGGTCAGAGGTCAATGTCACGTGGCCCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ERKPSSRPAWCP*RSEVNVTWPAA Trigger: GGCAGCGGGCCACGTGACATTGACCTCTGACCTCAAAGGGCACCAGGCGGGCCTGCTGCTTGGCTTTCTTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTTCTACCACACATCTTATGGCGGCATCCCACCAGCCTGCACAGCAGCACCAGCGTGGCGGACACTaGGGCCATCCAGATGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SPSTTHLMAASHQPAQQHQRGGH*GHPDEA Trigger: GGCCTCATCTGGATGGCCTCAGTGTCCGCCACGCTG...GTGCTGCTGTGCAGGCTGGTGGGATGCCGCCATAAGATGTGTGGTAGAAGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CCA 90 bp | GGAAGACAGGAAGAAGGCTCTGGCTGCACTGGACGGTGTATACATGGTCAGTTAAGGCCGCGGTGCCTGTaGGCCCGGATGAGGGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: GRQEEGSGCTGRCIHGQLRPRCL*ARMRAR Trigger: GCGAGCCCTCATCCGGGCCCACAGGCACCGCGGCCT...TAACTGACCATGTATACACCGTCCAGTGCAGCCAGAGCCTTCTTCCTGTCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR TCA 90 bp | GACACGCTGTTCACTCAGGAGTTAGGAGTGGCATCTGGGGTGACCTCACAGCCTGTGCCAGGGACAAGTTaGGGGCCAGAGGGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: DTLFTQELGVASGVTSQPVPGTS*GPEGCC Trigger: ACAGCACCCCTCTGGCCCTCAACTTGTCCCTGGCAC...AGGCTGTGAGGTCACCCCAGATGCCACTCCTAACTCCTGAGTGAACAGCGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR TCA 90 bp | TTTTCTGTGGTGGTAAGTCCTTCTACCACACATCTTATGGCGGCATCCCACCAGGCAGGTGCACCGCTGTaGAGGGCACCAGCGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: FSVVVSPSTTHLMAASHQAGAPL*RAPAWR Trigger: CCGCCACGCTGGTGCCCTTCACAGCGGTGCACCTGC...CTGGTGGGATGCCGCCATAAGATGTGTGGTAGAAGGACTTACCACCACAGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR GCA 90 bp | TGGTGCCCTTTGAGGTCAGAGGTCAATGTCACGTGGCCCGCTGCCTTGGGACCTGAAGGTGCAGAGCACTaGGATGTCGTAGTACTGCTC | + |
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Preference number: 4 (lower is better) Translates to: WCPLRSEVNVTWPAALGPEGAEH*DVVVLL Trigger: GAGCAGTACTACGACATCGCAGTGCTCTGCACCTTC...AGGTCCCAAGGCAGCGGGCCACGTGACATTGACCTCTGACCTCAAAGGGCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTTCTACCACACATCTTATGGCGGCATCCCACCAGCCTGCACAGCAGCACGCAATCACGTACTGCTaGTGCTCAGAGAGGTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SPSTTHLMAASHQPAQQHAITYC*CSERSP Trigger: TGGGGACCTCTCTGAGCATCAGCAGTACGTGATTGC...GTGCTGCTGTGCAGGCTGGTGGGATGCCGCCATAAGATGTGTGGTAGAAGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR GCA 90 bp | GGAAGACAGGAAGAAGGCTCTGGCTGCACTGGACGGTGTATACATGGTCAGTTAGTGCGTGGTGCTTGGTaGGGAAGAGGCCACAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: GRQEEGSGCTGRCIHGQLVRGAW*GRGHSA Trigger: TGCGCTGTGGCCTCTTCCGCACCAAGCACCACGCAC...TAACTGACCATGTATACACCGTCCAGTGCAGCCAGAGCCTTCTTCCTGTCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR GCA 90 bp | GTGCCCTTTGAGGTCAGAGGTCAATGTCACGTGGCCCGCTGCCTTGGGACCTTGAACCTGACCTCTGACTaGTCTGTGCTGTCTGGAATG | + |
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Preference number: 4 (lower is better) Translates to: VPFEVRGQCHVARCLGTLNLTSD*SVLSGM Trigger: CATTCCAGACAGCACAGAGCAGTCAGAGGTCAGGTT...CAAGGTCCCAAGGCAGCGGGCCACGTGACATTGACCTCTGACCTCAAAGGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CCA 90 bp | CATGTAACATGGTGCTCCCATAGCATGGCCTGTCCTCGTATCAACAGCAGACTTCCAGAGGGGTGCTGTTaGAAGGGGCTGGCCACACGG | + |
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Preference number: 4 (lower is better) Translates to: HVTWCSHSMACPRINSRLPEGCC*KGLATR Trigger: CCGTGTGGCCAGCCCCTTCCAACAGCACCCCTCTGG...AAGTCTGCTGTTGATACGAGGACAGGCCATGCTATGGGAGCACCATGTTACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CCA 90 bp | TTTTCTGTGGTGGTAAGTCCTTCTACCACACATCTTATGGCGGCATCCCACCAGGCCGTGCGTGGTGCTTaGTGCGGAAGAGGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: FSVVVSPSTTHLMAASHQAVRGA*CGRGHS Trigger: GCTGTGGCCTCTTCCGCACCAAGCACCACGCACGGC...CTGGTGGGATGCCGCCATAAGATGTGTGGTAGAAGGACTTACCACCACAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR CAA 72 bp | AGAGGTCAATGTCACGTGGCCCGCTGCCTTGGGACCTaGAATCTGGATGGCAGCATCCATGAGCTGGACAGT | + |
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Preference number: 4 (lower is better) Translates to: RGQCHVARCLGT*NLDGSIHELDS Trigger: ACTGTCCAGCTCATGGATGCTGCCATCCAGATTCAAGGTCCCAAGGCAGCGGGCCACGTGACATTGACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTTCTACCACACATCTTATGGCGGCATCCCACCAGCCTGCACAGCAGCACAGAAGGCTGCAAGGTTaGCTATGTGGCCTGTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SPSTTHLMAASHQPAQQHRRLQG*LCGLSR Trigger: CCTTGACAGGCCACATAGTCAACCTTGCAGCCTTCT...GTGCTGCTGTGCAGGCTGGTGGGATGCCGCCATAAGATGTGTGGTAGAAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CCA 90 bp | CATGTAACATGGTGCTCCCATAGCATGGCCTGTCCTCGTATCAACAGCAGACTTCAGCTGAGCCGTGCGTaGTGCTTGGTGCGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: HVTWCSHSMACPRINSRLQLSRA*CLVRKR Trigger: CCTCTTCCGCACCAAGCACCACGCACGGCTCAGCTG...AAGTCTGCTGTTGATACGAGGACAGGCCATGCTATGGGAGCACCATGTTACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR TCA 90 bp | GGAAGACAGGAAGAAGGCTCTGGCTGCACTGGACGGTGTATACATGGTCAGTTAGCAGGAAGAGGGACATaGAGGTGCAGAGCACTGCGA | + |
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Preference number: 4 (lower is better) Translates to: GRQEEGSGCTGRCIHGQLAGRGT*RCRALR Trigger: TCGCAGTGCTCTGCACCTTCATGTCCCTCTTCCTGC...TAACTGACCATGTATACACCGTCCAGTGCAGCCAGAGCCTTCTTCCTGTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR TCA 90 bp | AGCCTTCTGGAAGACAGGAAGAAGGCTCTGGCTGCACTGGACGGTGTATACATGCGAAGCTCATCCAGGTaGGGAAGAAGACGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLLEDRKKALAALDGVYMRSSSR*GRRRCC Trigger: ACAGCAGCGTCTTCTTCCTCACCTGGATGAGCTTCG...CATGTATACACCGTCCAGTGCAGCCAGAGCCTTCTTCCTGTCTTCCAGAAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR TCA 90 bp | AGCCTTCTGGAAGACAGGAAGAAGGCTCTGGCTGCACTGGACGGTGTATACATGCGCTGCTGTACATGTTaGTCTGCAGGAAGAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: SLLEDRKKALAALDGVYMRCCTC*SAGRGT Trigger: TGTCCCTCTTCCTGCAGATCAACATGTACAGCAGCG...CATGTATACACCGTCCAGTGCAGCCAGAGCCTTCTTCCTGTCTTCCAGAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR TCA 90 bp | CATGTAACATGGTGCTCCCATAGCATGGCCTGTCCTCGTATCAACAGCAGACTTGCCACTGCACCTCCCTaGCATCAGCAAAGCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: HVTWCSHSMACPRINSRLATAPP*HQQSRS Trigger: GCTTCTGCTTTGCTGATGTCAGGGAGGTGCAGTGGC...AAGTCTGCTGTTGATACGAGGACAGGCCATGCTATGGGAGCACCATGTTACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR TCA 90 bp | TTTTCTGTGGTGGTAAGTCCTTCTACCACACATCTTATGGCGGCATCCCACCAGGCTGAACCTGACCTCTaGCTGCTCTGTGCTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FSVVVSPSTTHLMAASHQAEPDL*LLCAVW Trigger: CCAGACAGCACAGAGCAGTCAGAGGTCAGGTTCAGC...CTGGTGGGATGCCGCCATAAGATGTGTGGTAGAAGGACTTACCACCACAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR GCA 90 bp | GGAAGACAGGAAGAAGGCTCTGGCTGCACTGGACGGTGTATACATGGTCAGTTAGCTGTTGGAGAAGGCTaGAAGGTTGACTATGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GRQEEGSGCTGRCIHGQLAVGEG*KVDYVA Trigger: GGCCACATAGTCAACCTTGCAGCCTTCTCCAACAGC...TAACTGACCATGTATACACCGTCCAGTGCAGCCAGAGCCTTCTTCCTGTCTTCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR TCA 90 bp | TTTTCTGTGGTGGTAAGTCCTTCTACCACACATCTTATGGCGGCATCCCACCAGTGTTCACCACCAGGATaGGGATGTTGCCCACAAAGC | + |
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Preference number: 4 (lower is better) Translates to: FSVVVSPSTTHLMAASHQCSPPG*GCCPQS Trigger: GCTTTGTGGGCAACATCCTCATCCTGGTGGTGAACA...CTGGTGGGATGCCGCCATAAGATGTGTGGTAGAAGGACTTACCACCACAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CCA 90 bp | GCAAACACCTTTGTAAACAAACTTTGTGAGAGGAGCATCCCAGAGCAGGAAGGCTCCACCCCAACAGTTTaGGCTGGAGTAGTCGCATCC | + |
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Preference number: 4 (lower is better) Translates to: ANTFVNKLCERSIPEQEGSTPTV*AGVVAS Trigger: GGATGCGACTACTCCAGCCCAAACTGTTGGGGTGGA...GCCTTCCTGCTCTGGGATGCTCCTCTCACAAAGTTTGTTTACAAAGGTGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CCA 90 bp | GCAAACACCTTTGTAAACAAACTTTGTGAGAGGAGCATCCCAGAGCAGGAAGGCCTGCTCTGTGCTGTCTaGAATGACGGCCTTGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: ANTFVNKLCERSIPEQEGLLCAV*NDGLER Trigger: ACGCTCAAGGCCGTCATTCCAGACAGCACAGAGCAG...GCCTTCCTGCTCTGGGATGCTCCTCTCACAAAGTTTGTTTACAAAGGTGTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| 3UTR CAA 72 bp | CTTTGTGAGAGGAGCATCCCAGAGCAGGAAGGCGTTTaGTTAAAGGGCCTTTCTCAGTCAGACACGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: LCERSIPEQEGV*LKGLSQSDTLF Trigger: GAACAGCGTGTCTGACTGAGAAAGGCCCTTTAACAAAACGCCTTCCTGCTCTGGGATGCTCCTCTCACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CCA 90 bp | CATGTAACATGGTGCTCCCATAGCATGGCCTGTCCTCGTATCAACAGCAGACTTGATGAAGTACAGGTCTaGGATGGTCATCTTCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: HVTWCSHSMACPRINSRLDEVQV*DGHLLP Trigger: CGGGAGAAGATGACCATCCCAGACCTGTACTTCATC...AAGTCTGCTGTTGATACGAGGACAGGCCATGCTATGGGAGCACCATGTTACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CCA 90 bp | AACACCTTTGTAAACAAACTTTGTGAGAGGAGCATCCCAGAGCAGGAAGGCGTTAGTACAGGTCTGGGATaGTCATCTTCTCCCGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: NTFVNKLCERSIPEQEGVSTGLG*SSSPGS Trigger: GCTTCCGGGAGAAGATGACCATCCCAGACCTGTACT...AACGCCTTCCTGCTCTGGGATGCTCCTCTCACAAAGTTTGTTTACAAAGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CCA 90 bp | AACACCTTTGTAAACAAACTTTGTGAGAGGAGCATCCCAGAGCAGGAAGGCGTTGTCCACTGCAGTAGGTaGACACTGATGAAGACGTTC | + |
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Preference number: 4 (lower is better) Translates to: NTFVNKLCERSIPEQEGVVHCSR*TLMKTF Trigger: GAACGTCTTCATCAGTGTCCACCTACTGCAGTGGAC...AACGCCTTCCTGCTCTGGGATGCTCCTCTCACAAAGTTTGTTTACAAAGGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR GCA 90 bp | GCAAACACCTTTGTAAACAAACTTTGTGAGAGGAGCATCCCAGAGCAGGAAGGCCTGTACATGTTGATCTaGAGGAAGAGGGACATGAAG | + |
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Preference number: 4 (lower is better) Translates to: ANTFVNKLCERSIPEQEGLYMLI*RKRDMK Trigger: CTTCATGTCCCTCTTCCTGCAGATCAACATGTACAG...GCCTTCCTGCTCTGGGATGCTCCTCTCACAAAGTTTGTTTACAAAGGTGTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS TCA 90 bp | GTGCCGCAGGTGCACCGCTGTGAAGGGCACCAGCGTGGCGGACACTaGGGCCATCCAGATGAGGCCACAGCTGAGCCGTGCGTGGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: VPQVHRCEGHQRGGH*GHPDEATAEPCVVL Trigger: AAGCACCACGCACGGCTCAGCTGTGGCCTCATCTGGATGGCCTCAGTGTCCGCCACGCTGGTGCCCTTCACAGCGGTGCACCTGCGGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS CCA 90 bp | GCGGACACTGAGGCCATCCAGATGAGGCCACAGCTGAGCCGTGCGTaGTGCTTGGTGCGGAAGAGGCCACAGCGCATGGCCTTGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ADTEAIQMRPQLSRA*CLVRKRPQRMALAS Trigger: GCTGGCCAAGGCCATGCGCTGTGGCCTCTTCCGCACCAAGCACCACGCACGGCTCAGCTGTGGCCTCATCTGGATGGCCTCAGTGTCCGC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS GCA 90 bp | GACACTGAGGCCATCCAGATGAGGCCACAGCTGAGCCGTGCGTGGTaGTTGGTGCGGAAGAGGCCACAGCGCATGGCCTTGGCCAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: DTEAIQMRPQLSRAW*LVRKRPQRMALASA Trigger: AGCGCTGGCCAAGGCCATGCGCTGTGGCCTCTTCCGCACCAAGCACCACGCACGGCTCAGCTGTGGCCTCATCTGGATGGCCTCAGTGTC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS GCA 90 bp | TGCACCTCCCTGACATCAGCAAAGCAGAAGCAGGCCTCCTCCGTGTaGCGCAGGTGCACCGCTGTGAAGGGCACCAGCGTGGCGGACACT | + |
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Preference number: 5 (lower is better) Translates to: CTSLTSAKQKQASSV*RRCTAVKGTSVADT Trigger: AGTGTCCGCCACGCTGGTGCCCTTCACAGCGGTGCACCTGCGGCACACGGAGGAGGCCTGCTTCTGCTTTGCTGATGTCAGGGAGGTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS GCA 90 bp | ATGAAGAAAACAAGGACCACTGCGAAGATCATCCTCAGGGCTTTCTaGCTGCGTGGGCGCAGGCCGCGGTGCCTGTGGGCCCGGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: MKKTRTTAKIILRAF*LRGRRPRCLWARMR Trigger: CCTCATCCGGGCCCACAGGCACCGCGGCCTGCGCCCACGCAGGCAGAAAGCCCTGAGGATGATCTTCGCAGTGGTCCTTGTTTTCTTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CAA 90 bp | AGTCCTTCTACCACACATCTTATGGCGGCATCCCACCAGCCTGCACAGCAGCACGCCAGAGGGGTGCTGTaGGAAGGGGCTGGCCACACG | + |
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Preference number: 5 (lower is better) Translates to: SPSTTHLMAASHQPAQQHARGVL*EGAGHT Trigger: CGTGTGGCCAGCCCCTTCCAACAGCACCCCTCTGGC...GTGCTGCTGTGCAGGCTGGTGGGATGCCGCCATAAGATGTGTGGTAGAAGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS CCA 90 bp | TCTGACTGCTCTGTGCTGTCTGGAATGACGGCCTTGAGCGTGGCATaGCAGAAGCGGTTCAGAGCCGGCAGGCTCGTCTTCTGCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: SDCSVLSGMTALSVA*QKRFRAGRLVFCST Trigger: TGTGGAGCAGAAGACGAGCCTGCCGGCTCTGAACCGCTTCTGCCATGCCACGCTCAAGGCCGTCATTCCAGACAGCACAGAGCAGTCAGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CAA 90 bp | AAGAAAGCCAAGCAGCAGGCCCGCCTGGTGCCCTTTGAGGTCAGAGGTCAATGTAGTGCCAGGGACAAGTaGAGGGCCAGAGGGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: KKAKQQARLVPFEVRGQCSARDK*RARGVL Trigger: CAGCACCCCTCTGGCCCTCAACTTGTCCCTGGCACT...ACATTGACCTCTGACCTCAAAGGGCACCAGGCGGGCCTGCTGCTTGGCTTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS GCA 90 bp | ATGATGGCGAAGGGCATGATGAAGCCCAGTGTGACCTCCAGCCACTaGACCTCCCTGACATCAGCAAAGCAGAAGCAGGCCTCCTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: MMAKGMMKPSVTSSH*TSLTSAKQKQASSV Trigger: CACGGAGGAGGCCTGCTTCTGCTTTGCTGATGTCAGGGAGGTGCAGTGGCTGGAGGTCACACTGGGCTTCATCATGCCCTTCGCCATCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS CCA 90 bp | GACTGCTTGCAGGGAGTGTCCCCTGGCTGCGTCCACTGCAGTAGGTaGACACTGATGAAGACGTTCTCCGGCAGCCAGCAGATGAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: DCLQGVSPGCVHCSR*TLMKTFSGSQQMKK Trigger: TTTCTTCATCTGCTGGCTGCCGGAGAACGTCTTCATCAGTGTCCACCTACTGCAGTGGACGCAGCCAGGGGACACTCCCTGCAAGCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CAA 90 bp | CATGTAACATGGTGCTCCCATAGCATGGCCTGTCCTCGTATCAACAGCAGACTTCTCCACCCCAACAGTTaGGGCTGGAGTAGTCGCATC | + |
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Preference number: 5 (lower is better) Translates to: HVTWCSHSMACPRINSRLLHPNS*GWSSRI Trigger: GATGCGACTACTCCAGCCCAAACTGTTGGGGTGGAG...AAGTCTGCTGTTGATACGAGGACAGGCCATGCTATGGGAGCACCATGTTACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CAA 90 bp | TTTTCTGTGGTGGTAAGTCCTTCTACCACACATCTTATGGCGGCATCCCACCAGTACTGCTCGTCCAGGTaGAACACCTCAATCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: FSVVVSPSTTHLMAASHQYCSSR*NTSIRE Trigger: CTCCCTGATTGAGGTGTTCAACCTGGACGAGCAGTA...CTGGTGGGATGCCGCCATAAGATGTGTGGTAGAAGGACTTACCACCACAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CAA 90 bp | TTTTCTGTGGTGGTAAGTCCTTCTACCACACATCTTATGGCGGCATCCCACCAGACCAGGATGAGGATGTaGCCCACAAAGCCAATAGGA | + |
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Preference number: 5 (lower is better) Translates to: FSVVVSPSTTHLMAASHQTRMRM*PTKPIG Trigger: TCCTATTGGCTTTGTGGGCAACATCCTCATCCTGGT...CTGGTGGGATGCCGCCATAAGATGTGTGGTAGAAGGACTTACCACCACAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS-3UTR CAA 90 bp | AACACCTTTGTAAACAAACTTTGTGAGAGGAGCATCCCAGAGCAGGAAGGCGTTACGCTGCTGTACATGTaGATCTGCAGGAAGAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: NTFVNKLCERSIPEQEGVTLLYM*ICRKRD Trigger: GTCCCTCTTCCTGCAGATCAACATGTACAGCAGCGT...AACGCCTTCCTGCTCTGGGATGCTCCTCTCACAAAGTTTGTTTACAAAGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS GCA 72 bp | CTCAGGGCTTTCTGCCTGCGTGGGCGCAGGCCGCGGTaGCTGTGGGCCCGGATGAGGGCTCGCACGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: LRAFCLRGRRPR*LWARMRARTMR Trigger: CCTCATCGTGCGAGCCCTCATCCGGGCCCACAGGCACCGCGGCCTGCGCCCACGCAGGCAGAAAGCCCTGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS GCA 72 bp | GGACCACTGCGAAGATCATCCTCAGGGCTTTCTGCCTaGGTGGGCGCAGGCCGCGGTGCCTGTGGGCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: GPLRRSSSGLSA*VGAGRGACGPG Trigger: TCCGGGCCCACAGGCACCGCGGCCTGCGCCCACGCAGGCAGAAAGCCCTGAGGATGATCTTCGCAGTGGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS TCA 72 bp | GTGCACCGCTGTGAAGGGCACCAGCGTGGCGGACACTaGGGCCATCCAGATGAGGCCACAGCTGAGCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: VHRCEGHQRGGH*GHPDEATAEPC Trigger: GCACGGCTCAGCTGTGGCCTCATCTGGATGGCCTCAGTGTCCGCCACGCTGGTGCCCTTCACAGCGGTGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS CCA 72 bp | GAGGCCATCCAGATGAGGCCACAGCTGAGCCGTGCGTaGTGCTTGGTGCGGAAGAGGCCACAGCGCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: EAIQMRPQLSRA*CLVRKRPQRMA Trigger: GGCCATGCGCTGTGGCCTCTTCCGCACCAAGCACCACGCACGGCTCAGCTGTGGCCTCATCTGGATGGCCTC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS GCA 72 bp | CTGACATCAGCAAAGCAGAAGCAGGCCTCCTCCGTGTaGCGCAGGTGCACCGCTGTGAAGGGCACCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: LTSAKQKQASSV*RRCTAVKGTSV Trigger: CACGCTGGTGCCCTTCACAGCGGTGCACCTGCGGCACACGGAGGAGGCCTGCTTCTGCTTTGCTGATGTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS CCA 72 bp | GTGCGTGGTGCTTGGTGCGGAAGAGGCCACAGCGCATaGCCTTGGCCAGCGCTAGGTACCTGTCGAAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: VRGAWCGRGHSA*PWPALGTCRSS Trigger: TGAGCTTCGACAGGTACCTAGCGCTGGCCAAGGCCATGCGCTGTGGCCTCTTCCGCACCAAGCACCACGCAC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS CAA 90 bp | AGCCGTGCGTGGTGCTTGGTGCGGAAGAGGCCACAGCGCATGGCCTaGGCCAGCGCTAGGTACCTGTCGAAGCTCATCCAGGTGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SRAWCLVRKRPQRMA*ASARYLSKLIQVRK Trigger: CTTCCTCACCTGGATGAGCTTCGACAGGTACCTAGCGCTGGCCAAGGCCATGCGCTGTGGCCTCTTCCGCACCAAGCACCACGCACGGCT 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS CCA 72 bp | CAGGGAGTGTCCCCTGGCTGCGTCCACTGCAGTAGGTaGACACTGATGAAGACGTTCTCCGGCAGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: QGVSPGCVHCSR*TLMKTFSGSQQ Trigger: CTGCTGGCTGCCGGAGAACGTCTTCATCAGTGTCCACCTACTGCAGTGGACGCAGCCAGGGGACACTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS CAA 72 bp | TGGTGCTTGGTGCGGAAGAGGCCACAGCGCATGGCCTaGGCCAGCGCTAGGTACCTGTCGAAGCTCATCCAG | + |
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Preference number: 6 (lower is better) Translates to: WCLVRKRPQRMA*ASARYLSKLIQ Trigger: CTGGATGAGCTTCGACAGGTACCTAGCGCTGGCCAAGGCCATGCGCTGTGGCCTCTTCCGCACCAAGCACCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS CCA 72 bp | TCTGTGCTGTCTGGAATGACGGCCTTGAGCGTGGCATaGCAGAAGCGGTTCAGAGCCGGCAGGCTCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SVLSGMTALSVA*QKRFRAGRLVF Trigger: GAAGACGAGCCTGCCGGCTCTGAACCGCTTCTGCCATGCCACGCTCAAGGCCGTCATTCCAGACAGCACAGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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| CDS CAA 90 bp | TCAATCAGGGAGTCAGCCACCAGGATGAGGTCGGCCGCCGCCAGGTaGATGAAGTACAGGTCTGGGATGGTCATCTTCTCCCGGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SIRESATRMRSAAAR*MKYRSGMVIFSRKL Trigger: CAGCTTCCGGGAGAAGATGACCATCCCAGACCTGTACTTCATCAACCTGGCGGCGGCCGACCTCATCCTGGTGGCTGACTCCCTGATTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066211.5 |
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