Pregenerated sensors for GPD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026827Ensembl transcript IDs: ENSMUST00000028167.3, ENSMUST00000112618.9, ENSMUST00000169687.8
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGTaGTTTATGGATCAGTTCACAAAGCTGAGACACAGCCTGTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: AERHNVCTGRIAAQG*FMDQFTKLRHSLCK Trigger: CTTGCACAGGCTGTGTCTCAGCTTTGTGAACTGATCCATAAAGCACCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR GCA 90 bp | CACCGTACCTCCCGGCAAATGTCAGGGCTGTCTTTATCTTACGCCTaGAAATCTGGAAGCTTTTGGAGGTTCTCTTTTAGAAATGTAACC | + |
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Preference number: 1 (lower is better) Translates to: HRTSRQMSGLSLSYA*KSGSFWRFSFRNVT Trigger: GGTTACATTTCTAAAAGAGAACCTCCAAAAGCTTCCAGATTTGCAGGCGTAAGATAAAGACAGCCCTGACATTTGCCGGGAGGTACGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR CCA 90 bp | TGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGAGATTTaGTCTCATCCCATTATATCCAACTTGCCACTCAAATGCTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: WKLCPIIAPRRNGEI*SHPIISNLPLKCWL Trigger: CAACCAGCATTTGAGTGGCAAGTTGGATATAATGGGATGAGACCAAATCTCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR GCA 90 bp | CTACAAGATTCAGAACTTGTGGGACTGGAAATTGTGTCCCATCATTaGTCCCAGGAGGAATGGAGAGATTTGGTCTCATCCCATTATATC | + |
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Preference number: 1 (lower is better) Translates to: LQDSELVGLEIVSHH*SQEEWRDLVSSHYI Trigger: GATATAATGGGATGAGACCAAATCTCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTCTGAATCTTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR TCA 90 bp | CTCCCAGCTCATATTATGATATGTGGACTCATAACCCATAATGAATaGGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACA | + |
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Preference number: 1 (lower is better) Translates to: LPAHIMICGLITHNE*GRETQCLHRQNSST Trigger: TGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCATTATGGGTTATGAGTCCACATATCATAATATGAGCTGGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR TCA 90 bp | TCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTaGTTTGTGTGTATTCCTACGTATATGTCTGATGTCTATCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: SVHYLLSSKDTDFGV*FVCIPTYMSDVYLG Trigger: TCCAAGATAGACATCAGACATATACGTAGGAATACACACAAATCAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR CCA 90 bp | ATGTCAGGGCTGTCTTTATCTTACGCCTGCAAATCTGGAAGCTTTTaGAGGTTCTCTTTTAGAAATGTAACCAAATCTCAACCAGATCTA | + |
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Preference number: 1 (lower is better) Translates to: MSGLSLSYACKSGSF*RFSFRNVTKSQPDL Trigger: TAGATCTGGTTGAGATTTGGTTACATTTCTAAAAGAGAACCTCCAAAAGCTTCCAGATTTGCAGGCGTAAGATAAAGACAGCCCTGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCAGAGAGTTTTTCCAGTaGGTACACAAAGAGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: ACARKAAGREVGTKGSTSREFFQ*VHKEKG Trigger: GCCCTTCTCTTTGTGTACTCACTGGAAAAACTCTCT...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCAAAGGACACCGACTTTaGGGTTTGATTTGTGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: ACARKAAGREVGTKGSTSKGHRL*GLICVY Trigger: ATACACACAAATCAAACCCCAAAGTCGGTGTCCTTT...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR CAA 90 bp | GACAAGAACAGGCCTGACAGTGCTACACGCTACAAGATTCAGAACTaGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: DKNRPDSATRYKIQN*WDWKLCPIIAPRRN Trigger: ATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTCTGAATCTTGTAGCGTGTAGCACTGTCAGGCCTGTTCTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR GCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGACCAGACAGAAAAGTGTaGAGTTTTAATCGGAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRPDRKV*SFNRKG Trigger: CCCCTTCCGATTAAAACTGCACACTTTTCTGTCTGG...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGAGAGAGTTTTTCCAGTaGGTACACAAAGAGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: MNEAERHNVCTGRIAAQGREFFQ*VHKEKG Trigger: GCCCTTCTCTTTGTGTACTCACTGGAAAAACTCTCT...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGCTGTGCATTATTTGCTaGGTTCAAAGGACACCGACT | + |
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Preference number: 2 (lower is better) Translates to: MNEAERHNVCTGRIAAQGLCIIC*VQRTPT Trigger: AGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAG...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR TCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGAGGGGTCCACCTCCTATaGTGCACAGGGATCTCATCA | + |
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Preference number: 2 (lower is better) Translates to: FTHRNVIKVFHVQRESLGGVHLL*CTGISS Trigger: TGATGAGATCCCTGTGCATCATAGGAGGTGGACCCC...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR GCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGACTGTGCAAGAAAGGCTaGCGGGAGAGAAGTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: FTHRNVIKVFHVQRESLGLCKKG*RERSGN Trigger: GTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAG...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGACTAGTTTGAATGAATaGATGAGCAGGCAGAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: MNEAERHNVCTGRIAAQGTSLNE*MSRQSV Trigger: GACACTCTGCCTGCTCATTCATTCATTCAAACTAGT...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGCCAGACAGAAAAGTGTaGAGTTTTAATCGGAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGPDRKV*SFNRKG Trigger: CCCCTTCCGATTAAAACTGCACACTTTTCTGTCTGG...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGCAGAACTTGTGGGACTaGAAATTGTGTCCCATCATT | + |
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Preference number: 2 (lower is better) Translates to: MNEAERHNVCTGRIAAQGQNLWD*KLCPII Trigger: AATGATGGGACACAATTTCCAGTCCCACAAGTTCTG...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR CAA 90 bp | GCTACAAGATTCAGAACTTGTGGGACTGGAAATTGTGTCCCATCATaGCTCCCAGGAGGAATGGAGAGATTTGGTCTCATCCCATTATAT | + |
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Preference number: 2 (lower is better) Translates to: ATRFRTCGTGNCVPS*LPGGMERFGLIPLY Trigger: ATATAATGGGATGAGACCAAATCTCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTCTGAATCTTGTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGACTAGTTTGAATGAATaGATGAGCAGGCAGAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGTSLNE*MSRQSV Trigger: GACACTCTGCCTGCTCATTCATTCATTCAAACTAGT...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR GCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACGAGAGACACAATGTTTaGACAGGCAGAATAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: YRFNWELRKIPGCFTHRNERHNV*TGRIAA Trigger: TGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTC...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGCAGAACTTGTGGGACTaGAAATTGTGTCCCATCATT | + |
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Preference number: 2 (lower is better) Translates to: SPVCALFAEFKGHRLWGLQNLWD*KLCPII Trigger: AATGATGGGACACAATTTCCAGTCCCACAAGTTCTG...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGAAGATTCAGAACTTGTaGGACTGGAAATTGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SPVCALFAEFKGHRLWGLKIQNL*DWKLCP Trigger: GGGACACAATTTCCAGTCCCACAAGTTCTGAATCTT...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR TCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGAGCAGATATGCTCAAATaGAGCACAGTGCACTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: FTHRNVIKVFHVQRESLGADMLK*STVHFP Trigger: AGGGAAGTGCACTGTGCTTCATTTGAGCATATCTGC...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR GCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGACCAGTGTTGTTTATTTaGTTATCCCTTTCCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRPVLFI*LSLSFL Trigger: AAGAAAGGAAAGGGATAAGCAAATAAACAACACTGG...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR GCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGATCTATTCCTGAAGTCTaGATATTTCAGGGGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: FTHRNVIKVFHVQRESLGSIPEV*IFQGWG Trigger: CCCCCACCCCTGAAATATGCAGACTTCAGGAATAGA...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR CAA 90 bp | CCCGGAAATAGAAGTGGAAGTATCGATACTTCATTTAATAATGAGTaGAGCTGTCTATTCCTGAAGTCTGCATATTTCAGGGGTGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PGNRSGSIDTSFNNE*SCLFLKSAYFRGGG Trigger: ACCCCCACCCCTGAAATATGCAGACTTCAGGAATAGACAGCTCAACTCATTATTAAATGAAGTATCGATACTTCCACTTCTATTTCCGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR TCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGAAGAGAGTTTTTCCAGTaGGTACACAAAGAGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: FTHRNVIKVFHVQRESLGREFFQ*VHKEKG Trigger: GCCCTTCTCTTTGTGTACTCACTGGAAAAACTCTCT...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR TCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGAACCGACTTTGGGGTTTaGTTTGTGTGTATTCCTACG | + |
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Preference number: 2 (lower is better) Translates to: FTHRNVIKVFHVQRESLGTDFGV*FVCIPT Trigger: CGTAGGAATACACACAAATCAAACCCCAAAGTCGGT...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACATAACCCATAATGAATaGGGCAGAGAGACACAATGT | + |
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Preference number: 2 (lower is better) Translates to: YRFNWELRKIPGCFTHRNITHNE*GRETQC Trigger: ACATTGTGTCTCTCTGCCTCATTCATTATGGGTTAT...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR GCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGAGAGAGACACAATGTTTaGACAGGCAGAATAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: FTHRNVIKVFHVQRESLGERHNV*TGRIAA Trigger: TGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTC...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR GCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGAAAGCCAAGGCAGATATaGTCAAATGAAGCACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: FTHRNVIKVFHVQRESLGKPRQI*SNEAQC Trigger: GCACTGTGCTTCATTTGAGCATATCTGCCTTGGCTT...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGCCAGTGTTGTTTATTTaGTTATCCCTTTCCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SPVCALFAEFKGHRLWGLPVLFI*LSLSFL Trigger: AAGAAAGGAAAGGGATAAGCAAATAAACAACACTGG...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGCCAGTGTTGTTTATTTaGTTATCCCTTTCCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGPVLFI*LSLSFL Trigger: AAGAAAGGAAAGGGATAAGCAAATAAACAACACTGG...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR CCA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTAGGAATGGAGAGATTTaGTCTCATCCCATTATATCC | + |
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Preference number: 2 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSRNGEI*SHPIIS Trigger: GGATATAATGGGATGAGACCAAATCTCTCCATTCCT...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCTTGTGGGACTGGAAATaGTGTCCCATCATTGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: ACARKAAGREVGTKGSTSLWDWK*CPIIAP Trigger: GGGAGCAATGATGGGACACAATTTCCAGTCCCACAA...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCCCCATTATATCCAACTaGCCACTCAAATGCTGGTTG | + |
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Preference number: 3 (lower is better) Translates to: ACARKAAGREVGTKGSTSPIISN*PLKCWL Trigger: CAACCAGCATTTGAGTGGCAAGTTGGATATAATGGG...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCTACAAGATTCAGAACTaGTGGGACTGGAAATTGTGT | + |
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Preference number: 3 (lower is better) Translates to: ACARKAAGREVGTKGSTSYKIQN*WDWKLC Trigger: ACACAATTTCCAGTCCCACAAGTTCTGAATCTTGTA...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCTCCAGTGTTGTTTATTaGCTTATCCCTTTCCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: ACARKAAGREVGTKGSTSSSVVY*LIPFLS Trigger: AGAAAGGAAAGGGATAAGCAAATAAACAACACTGGA...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCACTTTGGGGTTTGATTaGTGTGTATTCCTACGTATA | + |
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Preference number: 3 (lower is better) Translates to: ACARKAAGREVGTKGSTSTLGFD*CVFLRI Trigger: TATACGTAGGAATACACACAAATCAAACCCCAAAGT...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR-3UTR CAA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGCAAAGAGAAGGGCCTTaGGCAAACAGACCAGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: MNEAERHNVCTGRIAAQGQREGP*ANRPAS Trigger: GGAGGCTGGTCTGTTTGCCAAAGGCCCTTCTCTTTG...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| 3UTR CCA 72 bp | CCTGACAGTGCTACACGCTACAAGATTCAGAACTTGTaGGACTGGAAATTGTGTCCCATCATTGCTCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PDSATRYKIQNL*DWKLCPIIAPR Trigger: CCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTCTGAATCTTGTAGCGTGTAGCACTGTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACCGAGCTCCTGAGCTCTaGGGTGCTCACAAAGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: YRFNWELRKIPGCFTHRNRAPEL*GAHKVF Trigger: AAAGACTTTGTGAGCACCCAAGAGCTCAGGAGCTCG...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGTTGTGGGACTGGAAATaGTGTCCCATCATTGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SPVCALFAEFKGHRLWGLLWDWK*CPIIAP Trigger: GGGAGCAATGATGGGACACAATTTCCAGTCCCACAA...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACAATTGTGTCCCATCATaGCTCCCAGGAGGAATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: YRFNWELRKIPGCFTHRNNCVPS*LPGGME Trigger: CTCCATTCCTCCTGGGAGCAATGATGGGACACAATT...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGACAAAGAGAAGGGCCTTaGGCAAACAGACCAGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FTHRNVIKVFHVQRESLGQREGP*ANRPAS Trigger: GGAGGCTGGTCTGTTTGCCAAAGGCCCTTCTCTTTG...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR TCA 72 bp | TCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTaGGTCTCTGGGACGGGTGAAGGAGCGTGTCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SQERDKSISCPT*VSGTGEGACLR Trigger: TCTAAGACACGCTCCTTCACCCGTCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR GCA 72 bp | CACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGTaGTTTATGGATCAGTTCACAAAGCTGAGACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: HNVCTGRIAAQG*FMDQFTKLRHS Trigger: GCTGTGTCTCAGCTTTGTGAACTGATCCATAAAGCACCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR CCA 72 bp | AGTGCTACACGCTACAAGATTCAGAACTTGTGGGACTaGAAATTGTGTCCCATCATTGCTCCCAGGAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SATRYKIQNLWD*KLCPIIAPRRN Trigger: ATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTCTGAATCTTGTAGCGTGTAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACAGAGAGACACAATGTTaGCACAGGCAGAATAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: YRFNWELRKIPGCFTHRNRETQC*HRQNSS Trigger: GCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCT...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR GCA 72 bp | TCCCGGCAAATGTCAGGGCTGTCTTTATCTTACGCCTaGAAATCTGGAAGCTTTTGGAGGTTCTCTTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SRQMSGLSLSYA*KSGSFWRFSFR Trigger: TCTAAAAGAGAACCTCCAAAAGCTTCCAGATTTGCAGGCGTAAGATAAAGACAGCCCTGACATTTGCCGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR CCA 72 bp | TGTCCCATCATTGCTCCCAGGAGGAATGGAGAGATTTaGTCTCATCCCATTATATCCAACTTGCCACTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: CPIIAPRRNGEI*SHPIISNLPLK Trigger: TTTGAGTGGCAAGTTGGATATAATGGGATGAGACCAAATCTCTCCATTCCTCCTGGGAGCAATGATGGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGATCCAGTGTTGTTTATTaGCTTATCCCTTTCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRSSVVY*LIPFLS Trigger: AGAAAGGAAAGGGATAAGCAAATAAACAACACTGGA...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACCCCATTATATCCAACTaGCCACTCAAATGCTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: YRFNWELRKIPGCFTHRNPIISN*PLKCWL Trigger: CAACCAGCATTTGAGTGGCAAGTTGGATATAATGGG...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACCAGTCTGTGCATTATTaGCTGAGTTCAAAGGACACC | + |
|
Preference number: 3 (lower is better) Translates to: YRFNWELRKIPGCFTHRNQSVHY*LSSKDT Trigger: GGTGTCCTTTGAACTCAGCAAATAATGCACAGACTG...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR TCA 72 bp | TATACGGGGTCTGCCTCTAAAACTAGTTTGAATGAATaGATGAGCAGGCAGAGTGTCAAGTCTGACAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: YTGSASKTSLNE*MSRQSVKSDRV Trigger: TACCCTGTCAGACTTGACACTCTGCCTGCTCATTCATTCATTCAAACTAGTTTTAGAGGCAGACCCCGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGTATTGGCAAAGTAAGTaGGCAAACACACCAACATCT | + |
|
Preference number: 3 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGYWQSK*ANTPTS Trigger: AGATGTTGGTGTGTTTGCCAACTTACTTTGCCAATA...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTCGAGCTCCTGAGCTCTaGGGTGCTCACAAAGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSRAPEL*GAHKVF Trigger: AAAGACTTTGTGAGCACCCAAGAGCTCAGGAGCTCG...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGAAGAGAGACACAATGTTaGCACAGGCAGAATAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FTHRNVIKVFHVQRESLGRETQC*HRQNSS Trigger: GCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCT...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGTCCAGTGTTGTTTATTaGCTTATCCCTTTCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGSSVVY*LIPFLS Trigger: AGAAAGGAAAGGGATAAGCAAATAAACAACACTGGA...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGACAGTCTGTGCATTATTaGCTGAGTTCAAAGGACACC | + |
|
Preference number: 3 (lower is better) Translates to: FTHRNVIKVFHVQRESLGQSVHY*LSSKDT Trigger: GGTGTCCTTTGAACTCAGCAAATAATGCACAGACTG...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACACTTTGGGGTTTGATTaGTGTGTATTCCTACGTATA | + |
|
Preference number: 3 (lower is better) Translates to: YRFNWELRKIPGCFTHRNTLGFD*CVFLRI Trigger: TATACGTAGGAATACACACAAATCAAACCCCAAAGT...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTCCCATTATATCCAACTaGCCACTCAAATGCTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSPIISN*PLKCWL Trigger: CAACCAGCATTTGAGTGGCAAGTTGGATATAATGGG...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR TCA 72 bp | TATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTaGTTTGTGTGTATTCCTACGTATATGTCTGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: YLLSSKDTDFGV*FVCIPTYMSDV Trigger: GACATCAGACATATACGTAGGAATACACACAAATCAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR CCA 72 bp | TGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTaGGGTTTGATTTGTGTGTATTCCTACGTATATGTC | + |
|
Preference number: 3 (lower is better) Translates to: CALFAEFKGHRL*GLICVYSYVYV Trigger: GACATATACGTAGGAATACACACAAATCAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR GCA 72 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTaGTTTACTCACAGGAACGTGATAAAAGTATTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: YRFNWELRKIPG*FTHRNVIKVFH Trigger: ATGAAATACTTTTATCACGTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTTATTGGCAAAGTAAGTaGGCAAACACACCAACATCT | + |
|
Preference number: 3 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSYWQSK*ANTPTS Trigger: AGATGTTGGTGTGTTTGCCAACTTACTTTGCCAATA...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTTACAAGATTCAGAACTaGTGGGACTGGAAATTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSYKIQN*WDWKLC Trigger: ACACAATTTCCAGTCCCACAAGTTCTGAATCTTGTA...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR TCA 72 bp | AGGGAAAGAGAAATCAATGACAACCTCTATTTGTACTaGGTTAAAACCAGAATGAACATTTTTGTTGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: REREINDNLYLY*VKTRMNIFVVH Trigger: GTGGACAACAAAAATGTTCATTCTGGTTTTAACTCAGTACAAATAGAGGTTGTCATTGATTTCTCTTTCCCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCCCGGGCATCACAATATaGACCCCGGCACTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ACARKAAGREVGTKGSTSPGITI*TPALGW Trigger: CCAGCCCAGTGCCGGGGTCCATATTGTGATGCCCGG...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCCCACCTCCATGTAATTaGCCGTGGCAGCCCCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: ACARKAAGREVGTKGSTSPPPCN*PWQPRT Trigger: GGTACGGGGCTGCCACGGCCAATTACATGGAGGTGG...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCCGGGGATTGGAACTCTaGGGTCCAAGTTCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ACARKAAGREVGTKGSTSRGLEL*GPSSPR Trigger: CCGAGGAGAACTTGGACCGCAGAGTTCCAATCCCCG...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCTATGGACCCCGGCACTaGGCTGGCAGATGGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: ACARKAAGREVGTKGSTSYGPRH*AGRWEQ Trigger: TTGTTCCCATCTGCCAGCCCAGTGCCGGGGTCCATA...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCGGCGAGGTTCATCCGTaGATCGTTGTGTTGTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ACARKAAGREVGTKGSTSGEVHP*IVVLSV Trigger: GACGGACAACACAACGATGCACGGATGAACCTCGCC...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCTTTTCAGTCCTCTGGTaGCGGCATCTAGTGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACARKAAGREVGTKGSTSFSVLW*RHLVHS Trigger: GCTGTGCACTAGATGCCGTCACCAGAGGACTGAAAA...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCATCCACGGTATCTTCTaGCATGGAGCGGTAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ACARKAAGREVGTKGSTSIHGIF*HGAVGG Trigger: ACCACCTACCGCTCCATGGCAGAAGATACCGTGGAT...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCTGCTGCTTCCACATATaGCAGGCTCACTTGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ACARKAAGREVGTKGSTSCCFHI*QAHLLP Trigger: AGGAAGCAAGTGAGCCTGGCATATGTGGAAGCAGCA...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCCTCACGTCAAATTCCTaGCCTGTGAGCACATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ACARKAAGREVGTKGSTSLTSNS*PVSTSL Trigger: CAAGGATGTGCTCACAGGGCAGGAATTTGACGTGAG...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCAGGCAGGGCTTCCTCTaGAGCCTGAACATTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ACARKAAGREVGTKGSTSRQGFL*SLNIEK Trigger: TTTCTCAATGTTCAGGCTGCAGAGGAAGCCCTGCCT...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCTCTGCCATCACTGGTTaGAGGATCAAGAAGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ACARKAAGREVGTKGSTSSAITG*RIKKSH Trigger: ATGGGACTTCTTGATCCTGCAACCAGTGATGGCAGA...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCGTGAAACTTGACAGCTaGATCCACGGTATCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACARKAAGREVGTKGSTSVKLDS*IHGIFC Trigger: GCAGAAGATACCGTGGATGCAGCTGTCAAGTTTCAC...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGACGTACCTGGCAGCAGTaGGGGCGATGGCGAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRRTWQQ*GRWRGS Trigger: TGAACCTCGCCATCGCCCTCACTGCTGCCAGGTACG...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGACCGGGCATCACAATATaGACCCCGGCACTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRPGITI*TPALGW Trigger: CCAGCCCAGTGCCGGGGTCCATATTGTGATGCCCGG...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGACTGCAGCCTGAACATTaGGAAAGGCCAGGCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRLQPEH*ERPGGC Trigger: GCACCCGCCTGGCCTTTCTCAATGTTCAGGCTGCAG...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCAGAAGAAAATCACTCTaGCATCACTGGTTGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ACARKAAGREVGTKGSTSRRKSL*HHWLQD Trigger: ATCCTGCAACCAGTGATGGCAGAGTGATTTTCTTCT...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGCGTACCTGGCAGCAGTaGGGGCGATGGCGAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGRTWQQ*GRWRGS Trigger: TGAACCTCGCCATCGCCCTCACTGCTGCCAGGTACG...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGAGAAAGGCCAGGCGGGTaGGCCGTGAGATCATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRERPGG*AVRSCQ Trigger: TTGACATGATCTCACGGCGCACCCGCCTGGCCTTTC...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGACGGGGATTGGAACTCTaGGGTCCAAGTTCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRRGLEL*GPSSPR Trigger: CCGAGGAGAACTTGGACCGCAGAGTTCCAATCCCCG...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGAACCCCGGCACTGGGCTaGCAGATGGGAACAACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRTPALG*QMGTTF Trigger: AAACGTTGTTCCCATCTGCCAGCCCAGTGCCGGGGT...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGCCATGTAATTGGCCGTaGCAGCCCCGTACCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPVCALFAEFKGHRLWGLPCNWP*QPRTWQ Trigger: CTGCCAGGTACGGGGCTGCCACGGCCAATTACATGG...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGCTGCTCTTCAGGCATTaGCTCCCTGCAACCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MNEAERHNVCTGRIAAQGLLFRH*LPATRS Trigger: TGACCTGGTTGCAGGGAGTCAATGCCTGAAGAGCAG...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGAGATACCACTCCAGGCTaGCAAGACATCCCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRDTTPG*QDIPSS Trigger: AGAAGAGGGGATGTCTTGGCAGCCTGGAGTGGTATC...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGCGGGGATTGGAACTCTaGGGTCCAAGTTCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGRGLEL*GPSSPR Trigger: CCGAGGAGAACTTGGACCGCAGAGTTCCAATCCCCG...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACCCATGTAATTGGCCGTaGCAGCCCCGTACCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRFNWELRKIPGCFTHRNPCNWP*QPRTWQ Trigger: CTGCCAGGTACGGGGCTGCCACGGCCAATTACATGG...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACCCACCTCCATGTAATTaGCCGTGGCAGCCCCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: YRFNWELRKIPGCFTHRNPPPCN*PWQPRT Trigger: GGTACGGGGCTGCCACGGCCAATTACATGGAGGTGG...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGACCCCGGCACTGGGCTaGCAGATGGGAACAACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGTPALG*QMGTTF Trigger: AAACGTTGTTCCCATCTGCCAGCCCAGTGCCGGGGT...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGTATGGACCCCGGCACTaGGCTGGCAGATGGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SPVCALFAEFKGHRLWGLYGPRH*AGRWEQ Trigger: TTGTTCCCATCTGCCAGCCCAGTGCCGGGGTCCATA...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGATCTGAAGGAATAGGATaGTGCGTGACGTCCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRSEGIG*CVTSVG Trigger: GCCAACGGACGTCACGCACCATCCTATTCCTTCAGA...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGCGGTATCTTCTGCCATaGAGCGGTAGGTGGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: MNEAERHNVCTGRIAAQGRYLLP*SGRWST Trigger: AGTGGACCACCTACCGCTCCATGGCAGAAGATACCG...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGATTCAAAGTCATGAGCTaGGCTTCTCTGGAGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRFKVMS*ASLEGG Trigger: ACCTCCCTCCAGAGAAGCTCAGCTCATGACTTTGAA...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGTTTTCAGTCCTCTGGTaGCGGCATCTAGTGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: MNEAERHNVCTGRIAAQGFSVLW*RHLVHS Trigger: GCTGTGCACTAGATGCCGTCACCAGAGGACTGAAAA...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGAAAGTTGGCACGTTCGTaGAGGGCTTCTTTCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRKLARS*RASFTI Trigger: GATGGTGAAAGAAGCCCTTCACGAACGTGCCAACTT...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGATGCTGCTTCCACATATaGCAGGCTCACTTGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRCCFHI*QAHLLP Trigger: AGGAAGCAAGTGAGCCTGGCATATGTGGAAGCAGCA...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGGGCGAGGTTCATCCGTaGATCGTTGTGTTGTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGGEVHP*IVVLSV Trigger: GACGGACAACACAACGATGCACGGATGAACCTCGCC...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGACTCACGTCAAATTCCTaGCCTGTGAGCACATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRLTSNS*PVSTSL Trigger: CAAGGATGTGCTCACAGGGCAGGAATTTGACGTGAG...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR GCA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGGATACCACTCCAGGCTaGCAAGACATCCCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MNEAERHNVCTGRIAAQGDTTPG*QDIPSS Trigger: AGAAGAGGGGATGTCTTGGCAGCCTGGAGTGGTATC...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGATCCACGGTATCTTCTaGCATGGAGCGGTAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MNEAERHNVCTGRIAAQGIHGIF*HGAVGG Trigger: ACCACCTACCGCTCCATGGCAGAAGATACCGTGGAT...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGAAGGCAGGGCTTCCTCTaGAGCCTGAACATTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRRQGFL*SLNIEK Trigger: TTTCTCAATGTTCAGGCTGCAGAGGAAGCCCTGCCT...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACACCCCGGCACTGGGCTaGCAGATGGGAACAACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YRFNWELRKIPGCFTHRNTPALG*QMGTTF Trigger: AAACGTTGTTCCCATCTGCCAGCCCAGTGCCGGGGT...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR CAA 72 bp | AGGCCTGACAGTGCTACACGCTACAAGATTCAGAACTaGTGGGACTGGAAATTGTGTCCCATCATTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPDSATRYKIQN*WDWKLCPIIAP Trigger: GGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTCTGAATCTTGTAGCGTGTAGCACTGTCAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGACTGCAGCCTGAACATTaGGAAAGGCCAGGCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTHRNVIKVFHVQRESLGLQPEH*ERPGGC Trigger: GCACCCGCCTGGCCTTTCTCAATGTTCAGGCTGCAG...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGATCCACGGTATCTTCTaGCATGGAGCGGTAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPVCALFAEFKGHRLWGLIHGIF*HGAVGG Trigger: ACCACCTACCGCTCCATGGCAGAAGATACCGTGGAT...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGTCTGAAGGAATAGGATaGTGCGTGACGTCCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPVCALFAEFKGHRLWGLSEGIG*CVTSVG Trigger: GCCAACGGACGTCACGCACCATCCTATTCCTTCAGA...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR CAA 72 bp | AAAGAATGCTCTCTCCAGGCTCGAGCTCCTGAGCTCTaGGGTGCTCACAAAGTCTTTCTAGCATCATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KECSLQARAPEL*GAHKVFLASFQ Trigger: TTGGAATGATGCTAGAAAGACTTTGTGAGCACCCAAGAGCTCAGGAGCTCGAGCCTGGAGAGAGCATTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGTTCAAAGTCATGAGCTaGGCTTCTCTGGAGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPVCALFAEFKGHRLWGLFKVMS*ASLEGG Trigger: ACCTCCCTCCAGAGAAGCTCAGCTCATGACTTTGAA...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGAAGTTGGCACGTTCGTaGAGGGCTTCTTTCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: SPVCALFAEFKGHRLWGLKLARS*RASFTI Trigger: GATGGTGAAAGAAGCCCTTCACGAACGTGCCAACTT...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTCGTACCTGGCAGCAGTaGGGGCGATGGCGAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSRTWQQ*GRWRGS Trigger: TGAACCTCGCCATCGCCCTCACTGCTGCCAGGTACG...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGCCCGCATTCAAGTTGTaGAACTTGACAGCTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGPAFKL*NLTAAS Trigger: GGATGCAGCTGTCAAGTTTCACAACTTGAATGCGGG...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGGTACCTATCGATGTCTaGAGGCAGCAGGCTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGVPIDV*RQQADF Trigger: GAAATCAGCCTGCTGCCTTCAGACATCGATAGGTAC...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGACGTCCATTTGTACATTaGTACTCTCTAGGACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRRPFVH*YSLGHA Trigger: AGCGTGTCCTAGAGAGTATCAATGTACAAATGGACG...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGTGCTGCTTCCACATATaGCAGGCTCACTTGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGCCFHI*QAHLLP Trigger: AGGAAGCAAGTGAGCCTGGCATATGTGGAAGCAGCA...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGCTCACGTCAAATTCCTaGCCTGTGAGCACATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGLTSNS*PVSTSL Trigger: CAAGGATGTGCTCACAGGGCAGGAATTTGACGTGAG...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGGTGAAACTTGACAGCTaGATCCACGGTATCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MNEAERHNVCTGRIAAQGVKLDS*IHGIFC Trigger: GCAGAAGATACCGTGGATGCAGCTGTCAAGTTTCAC...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGCTTTCCAGTCACACTTaGCATTTTGGCCACCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: MNEAERHNVCTGRIAAQGLSSHT*HFGHLE Trigger: TTCGAGGTGGCCAAAATGGCAAGTGTGACTGGAAAG...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACACTGCGCTCATCAGCTaGAGAAACTCGTGCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YRFNWELRKIPGCFTHRNTALIS*RNSCSS Trigger: TGAGCTGCACGAGTTTCTGCAGCTGATGAGCGCAGT...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTCTGCAGCCTGAACATTaGGAAAGGCCAGGCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSLQPEH*ERPGGC Trigger: GCACCCGCCTGGCCTTTCTCAATGTTCAGGCTGCAG...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACGTACCTATCGATGTCTaGAGGCAGCAGGCTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: YRFNWELRKIPGCFTHRNVPIDV*RQQADF Trigger: GAAATCAGCCTGCTGCCTTCAGACATCGATAGGTAC...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGCAGGCATTGACTCCCTaGAACCAGGTCATACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGQALTP*NQVIHL Trigger: AAGATGTATGACCTGGTTGCAGGGAGTCAATGCCTG...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGCAGGCATTGACTCCCTaGAACCAGGTCATACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPVCALFAEFKGHRLWGLQALTP*NQVIHL Trigger: AAGATGTATGACCTGGTTGCAGGGAGTCAATGCCTG...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGTCTGCCATCACTGGTTaGAGGATCAAGAAGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGSAITG*RIKKSH Trigger: ATGGGACTTCTTGATCCTGCAACCAGTGATGGCAGA...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGCTTTCCAGTCACACTTaGCATTTTGGCCACCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPVCALFAEFKGHRLWGLLSSHT*HFGHLE Trigger: TTCGAGGTGGCCAAAATGGCAAGTGTGACTGGAAAG...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTCCACCTCCATGTAATTaGCCGTGGCAGCCCCGTACC | + |
|
Preference number: 4 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSPPPCN*PWQPRT Trigger: GGTACGGGGCTGCCACGGCCAATTACATGGAGGTGG...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGACGGTATCTTCTGCCATaGAGCGGTAGGTGGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FTHRNVIKVFHVQRESLGRYLLP*SGRWST Trigger: AGTGGACCACCTACCGCTCCATGGCAGAAGATACCG...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR CAA 72 bp | GTGTCCCATCATTGCTCCCAGGAGGAATGGAGAGATTaGGTCTCATCCCATTATATCCAACTTGCCACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSHHCSQEEWRD*VSSHYIQLATQ Trigger: TTGAGTGGCAAGTTGGATATAATGGGATGAGACCAAATCTCTCCATTCCTCCTGGGAGCAATGATGGGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| 3UTR CAA 72 bp | TTCAGAACTTGTGGGACTGGAAATTGTGTCCCATCATaGCTCCCAGGAGGAATGGAGAGATTTGGTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FRTCGTGNCVPS*LPGGMERFGLI Trigger: GATGAGACCAAATCTCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGCCAGGTCATACATCTTaGTTCCCACCCAGTAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGPGHTS*FPPSNK Trigger: CTTATTACTGGGTGGGAATCAAGATGTATGACCTGG...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGCCAGGTCATACATCTTaGTTCCCACCCAGTAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPVCALFAEFKGHRLWGLPGHTS*FPPSNK Trigger: CTTATTACTGGGTGGGAATCAAGATGTATGACCTGG...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGTCAAGTTGTGAAACTTaGCAGCTGCATCCACGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGSSCET*QLHPRY Trigger: ATACCGTGGATGCAGCTGTCAAGTTTCACAACTTGA...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGCTCTCTAGGACACGCTaGACATCAACAATGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: SPVCALFAEFKGHRLWGLLSRTR*TSTMVM Trigger: CATTACCATTGTTGATGTTCAGCGTGTCCTAGAGAG...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGCGTCCATTTGTACATTaGTACTCTCTAGGACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGRPFVH*YSLGHA Trigger: AGCGTGTCCTAGAGAGTATCAATGTACAAATGGACG...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACGTGAAACTTGACAGCTaGATCCACGGTATCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YRFNWELRKIPGCFTHRNVKLDS*IHGIFC Trigger: GCAGAAGATACCGTGGATGCAGCTGTCAAGTTTCAC...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTGAAAGGCCAGGCGGGTaGGCCGTGAGATCATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSERPGG*AVRSCQ Trigger: TTGACATGATCTCACGGCGCACCCGCCTGGCCTTTC...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGAACTGCGCTCATCAGCTaGAGAAACTCGTGCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FTHRNVIKVFHVQRESLGTALIS*RNSCSS Trigger: TGAGCTGCACGAGTTTCTGCAGCTGATGAGCGCAGT...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTTATGGACCCCGGCACTaGGCTGGCAGATGGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSYGPRH*AGRWEQ Trigger: TTGTTCCCATCTGCCAGCCCAGTGCCGGGGTCCATA...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGATCTGAAGGAATAGGATaGTGCGTGACGTCCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTHRNVIKVFHVQRESLGSEGIG*CVTSVG Trigger: GCCAACGGACGTCACGCACCATCCTATTCCTTCAGA...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGATTCAAAGTCATGAGCTaGGCTTCTCTGGAGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FTHRNVIKVFHVQRESLGFKVMS*ASLEGG Trigger: ACCTCCCTCCAGAGAAGCTCAGCTCATGACTTTGAA...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTCTGCTCTTCAGGCATTaGCTCCCTGCAACCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSLLFRH*LPATRS Trigger: TGACCTGGTTGCAGGGAGTCAATGCCTGAAGAGCAG...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGGTTAATGTCTTCTTCTaGAGGAATAGGATGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SPVCALFAEFKGHRLWGLVNVFF*RNRMVR Trigger: ACGCACCATCCTATTCCTTCAGAAGAAGACATTAAC...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACTCAAGTTGTGAAACTTaGCAGCTGCATCCACGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YRFNWELRKIPGCFTHRNSSCET*QLHPRY Trigger: ATACCGTGGATGCAGCTGTCAAGTTTCACAACTTGA...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGACCCGCATTCAAGTTGTaGAACTTGACAGCTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FTHRNVIKVFHVQRESLGPAFKL*NLTAAS Trigger: GGATGCAGCTGTCAAGTTTCACAACTTGAATGCGGG...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGAGTACCTATCGATGTCTaGAGGCAGCAGGCTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTHRNVIKVFHVQRESLGVPIDV*RQQADF Trigger: GAAATCAGCCTGCTGCCTTCAGACATCGATAGGTAC...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACCTCTCTAGGACACGCTaGACATCAACAATGGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: YRFNWELRKIPGCFTHRNLSRTR*TSTMVM Trigger: CATTACCATTGTTGATGTTCAGCGTGTCCTAGAGAG...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGAGAAGAAAATCACTCTaGCATCACTGGTTGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGRRKSL*HHWLQD Trigger: ATCCTGCAACCAGTGATGGCAGAGTGATTTTCTTCT...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACGTTAATGTCTTCTTCTaGAGGAATAGGATGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: YRFNWELRKIPGCFTHRNVNVFF*RNRMVR Trigger: ACGCACCATCCTATTCCTTCAGAAGAAGACATTAAC...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACAGAAGAAAATCACTCTaGCATCACTGGTTGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YRFNWELRKIPGCFTHRNRRKSL*HHWLQD Trigger: ATCCTGCAACCAGTGATGGCAGAGTGATTTTCTTCT...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTGATACCACTCCAGGCTaGCAAGACATCCCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSDTTPG*QDIPSS Trigger: AGAAGAGGGGATGTCTTGGCAGCCTGGAGTGGTATC...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTAAGTTGGCACGTTCGTaGAGGGCTTCTTTCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSKLARS*RASFTI Trigger: GATGGTGAAAGAAGCCCTTCACGAACGTGCCAACTT...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGACCAGGTCATACATCTTaGTTCCCACCCAGTAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTHRNVIKVFHVQRESLGPGHTS*FPPSNK Trigger: CTTATTACTGGGTGGGAATCAAGATGTATGACCTGG...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGACGTCCATTTGTACATTaGTACTCTCTAGGACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTHRNVIKVFHVQRESLGRPFVH*YSLGHA Trigger: AGCGTGTCCTAGAGAGTATCAATGTACAAATGGACG...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACCCCGTATTTCACCTCTaGTTCAATGTATGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: YRFNWELRKIPGCFTHRNPVFHL*FNVWKF Trigger: GAATTTCCATACATTGAAGCAGAGGTGAAATACGGG...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACAGTACAGAAATCTCGTaGCTGTTTCAAGTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YRFNWELRKIPGCFTHRNSTEIS*LFQVLP Trigger: AGGAAGAACTTGAAACAGCCACGAGATTTCTGTACT...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028167.3 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTCTTTCCAGTCACACTTaGCATTTTGGCCACCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSLSSHT*HFGHLE Trigger: TTCGAGGTGGCCAAAATGGCAAGTGTGACTGGAAAG...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR GCA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTCCCGTATTTCACCTCTaGTTCAATGTATGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSPVFHL*FNVWKF Trigger: GAATTTCCATACATTGAAGCAGAGGTGAAATACGGG...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CCA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTAGTACAGAAATCTCGTaGCTGTTTCAAGTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSSTEIS*LFQVLP Trigger: AGGAAGAACTTGAAACAGCCACGAGATTTCTGTACT...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028167.3 ENSMUST00000169687.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCCCTGTGAGCACATCCTaGCACCGCGCACCGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: ACARKAAGREVGTKGSTSPVSTS*HRAPLT Trigger: AGTGAGCGGTGCGCGGTGCAAGGATGTGCTCACAGG...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGTGCAAGAAAGGCTGCCGGGAGAGAAGTGGGAACGAAGGGGTCCACCTCCGCTTTCCAGTCACACTaGCCATTTTGGCCACCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: ACARKAAGREVGTKGSTSAFQSH*PFWPPR Trigger: TCGAGGTGGCCAAAATGGCAAGTGTGACTGGAAAGC...GGAGGTGGACCCCTTCGTTCCCACTTCTCTCCCGGCAGCCTTTCTTGCACAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS TCA 90 bp | ACAGCCCAACAGTCCTACTCGGTCCCGCATTCAAGTTGTGAAACTTaGCAGCTGCATCCACGGTATCTTCTGCCATGGAGCGGTAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TAQQSYSVPHSSCET*QLHPRYLLPWSGRW Trigger: CCACCTACCGCTCCATGGCAGAAGATACCGTGGATGCAGCTGTCAAGTTTCACAACTTGAATGCGGGACCGAGTAGGACTGTTGGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGCCTGTGAGCACATCCTaGCACCGCGCACCGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: MNEAERHNVCTGRIAAQGPVSTS*HRAPLT Trigger: AGTGAGCGGTGCGCGGTGCAAGGATGTGCTCACAGG...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGATCAGGGTCTGTCTTCTaGAGCAAGCTCACCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRSGSVF*SKLTTS Trigger: GGAGGTGGTGAGCTTGCTCAAGAAGACAGACCCTGA...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGACAGTGGTGCCAGCAATaGTCATCTTCTCCCAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRQWCQQ*SSSPKA Trigger: TGCCTTGGGAGAAGATGACAATTGCTGGCACCACTG...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGACCAGTCTTTGCCTCCTaGAAGGAACAGCCCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRPVFAS*KEQPNS Trigger: ACTGTTGGGCTGTTCCTTCAAGGAGGCAAAGACTGG...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGAGGTTTTGGCCAGATGTaGTGCAACCTCGCTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRGFGQM*CNLALK Trigger: CTTGAGAGCGAGGTTGCACAACATCTGGCCAAAACC...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGTCAGGGTCTGTCTTCTaGAGCAAGCTCACCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPVCALFAEFKGHRLWGLSGSVF*SKLTTS Trigger: GGAGGTGGTGAGCTTGCTCAAGAAGACAGACCCTGA...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGACCTGTGAGCACATCCTaGCACCGCGCACCGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FTHRNVIKVFHVQRESLGPVSTS*HRAPLT Trigger: AGTGAGCGGTGCGCGGTGCAAGGATGTGCTCACAGG...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGCTCTGCCATCACTGGTaGCAGGATCAAGAAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: MNEAERHNVCTGRIAAQGLCHHW*QDQEVP Trigger: TGGGACTTCTTGATCCTGCAACCAGTGATGGCAGAG...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGCAGTGGTGCCAGCAATaGTCATCTTCTCCCAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MNEAERHNVCTGRIAAQGQWCQQ*SSSPKA Trigger: TGCCTTGGGAGAAGATGACAATTGCTGGCACCACTG...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGCCAGTCTTTGCCTCCTaGAAGGAACAGCCCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: MNEAERHNVCTGRIAAQGPVFAS*KEQPNS Trigger: ACTGTTGGGCTGTTCCTTCAAGGAGGCAAAGACTGG...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | GAACTTGTGGGACTGGAAATTGTGTCCCATCATTGCTCCCAGGAGGAATGGAGACCGTGCATCGTTGTGTaGTCCGTCATAGTAGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: ELVGLEIVSHHCSQEEWRPCIVV*SVIVDN Trigger: ATTGTCTACTATGACGGACAACACAACGATGCACGG...TCTCCATTCCTCCTGGGAGCAATGATGGGACACAATTTCCAGTCCCACAAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGAAAGGGCCGGAGGCATaGATAACGCATTTGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPVCALFAEFKGHRLWGLKGPEA*ITHLAL Trigger: GAGAGCCAAATGCGTTATCAATGCCTCCGGCCCTTT...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGCTCTGCCATCACTGGTaGCAGGATCAAGAAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGLCHHW*QDQEVP Trigger: TGGGACTTCTTGATCCTGCAACCAGTGATGGCAGAG...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGCCAGTCTTTGCCTCCTaGAAGGAACAGCCCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGPVFAS*KEQPNS Trigger: ACTGTTGGGCTGTTCCTTCAAGGAGGCAAAGACTGG...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGGGTTTTGGCCAGATGTaGTGCAACCTCGCTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPVCALFAEFKGHRLWGLGFGQM*CNLALK Trigger: CTTGAGAGCGAGGTTGCACAACATCTGGCCAAAACC...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGATTTTTCTGGCAACTATAATAGTCAAAGGAAGCCAGCAGTGCCTGGGGCTTTCCAGTCACACTaGCCATTTTGGCCACCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SKDFSGNYNSQRKPAVPGAFQSH*PFWPPR Trigger: TCGAGGTGGCCAAAATGGCAAGTGTGACTGGAAAGC...CCCAGGCACTGCTGGCTTCCTTTGACTATTATAGTTGCCAGAAAAATCCTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGCCGTGCATCGTTGTGTaGTCCGTCATAGTAGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: SPVCALFAEFKGHRLWGLPCIVV*SVIVDN Trigger: ATTGTCTACTATGACGGACAACACAACGATGCACGG...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGTCGTCCATTTGTACATaGATACTCTCTAGGACACGC | + |
|
Preference number: 5 (lower is better) Translates to: MNEAERHNVCTGRIAAQGSSICT*ILSRTR Trigger: GCGTGTCCTAGAGAGTATCAATGTACAAATGGACGA...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS CCA 90 bp | GTTCTGTTCGAGACTTGTAGCCCATTTCATAGTACAGAAATCTCGTaGCTGTTTCAAGTTCTTCTTGGGATGACCAGGACGTTGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: VLFETCSPFHSTEIS*LFQVLLGMTRTLLQ Trigger: CTGTAGCAACGTCCTGGTCATCCCAAGAAGAACTTGAAACAGCCACGAGATTTCTGTACTATGAAATGGGCTACAAGTCTCGAACAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112618.9 |
||
| CDS-3UTR CAA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGAAAAGGGCCGGAGGCATaGATAACGCATTTGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FTHRNVIKVFHVQRESLGKGPEA*ITHLAL Trigger: GAGAGCCAAATGCGTTATCAATGCCTCCGGCCCTTT...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CAA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGAGGTTTTGGCCAGATGTaGTGCAACCTCGCTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTHRNVIKVFHVQRESLGGFGQM*CNLALK Trigger: CTTGAGAGCGAGGTTGCACAACATCTGGCCAAAACC...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | TTTACTCACAGGAACGTGATAAAAGTATTTCATGTCCAACGTGAGTCTCTGGGAGCTTTCCAGTCACACTaGCCATTTTGGCCACCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: FTHRNVIKVFHVQRESLGAFQSH*PFWPPR Trigger: TCGAGGTGGCCAAAATGGCAAGTGTGACTGGAAAGC...TCCCAGAGACTCACGTTGGACATGAAATACTTTTATCACGTTCCTGTGAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGTCGTCCATTTGTACATaGATACTCTCTAGGACACGC | + |
|
Preference number: 5 (lower is better) Translates to: SPVCALFAEFKGHRLWGLSSICT*ILSRTR Trigger: GCGTGTCCTAGAGAGTATCAATGTACAAATGGACGA...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CAA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTTCAGGGTCTGTCTTCTaGAGCAAGCTCACCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSSGSVF*SKLTTS Trigger: GGAGGTGGTGAGCTTGCTCAAGAAGACAGACCCTGA...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | ATGAATGAGGCAGAGAGACACAATGTTTGCACAGGCAGAATAGCAGCACAAGGGAGTGCTATCTGTAAGTaGTTCTGTTCGAGACTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: MNEAERHNVCTGRIAAQGSAICK*FCSRLV Trigger: TACAAGTCTCGAACAGAACAACTTACAGATAGCACT...CCCTTGTGCTGCTATTCTGCCTGTGCAAACATTGTGTCTCTCTGCCTCATTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACTCGTCCATTTGTACATaGATACTCTCTAGGACACGC | + |
|
Preference number: 5 (lower is better) Translates to: YRFNWELRKIPGCFTHRNSSICT*ILSRTR Trigger: GCGTGTCCTAGAGAGTATCAATGTACAAATGGACGA...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS-3UTR CAA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTAAAGGGCCGGAGGCATaGATAACGCATTTGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSKGPEA*ITHLAL Trigger: GAGAGCCAAATGCGTTATCAATGCCTCCGGCCCTTT...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CAA 90 bp | GGCATGCCTTATTTCAATTTCATAATTAAAGTTAACGGAAGTCTGCCCAGTTCTCAGTGGTGCCAGCAATaGTCATCTTCTCCCAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GMPYFNFIIKVNGSLPSSQWCQQ*SSSPKA Trigger: TGCCTTGGGAGAAGATGACAATTGCTGGCACCACTG...AGAACTGGGCAGACTTCCGTTAACTTTAATTATGAAATTGAAATAAGGCATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGTCTGTGCATTATTTGCTGAGTTCAAAGGACACCGACTTTGGGGTTTGAGTGCTATCTGTAAGTaGTTCTGTTCGAGACTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SPVCALFAEFKGHRLWGLSAICK*FCSRLV Trigger: TACAAGTCTCGAACAGAACAACTTACAGATAGCACT...CAAACCCCAAAGTCGGTGTCCTTTGAACTCAGCAAATAATGCACAGACTGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS-3UTR CAA 90 bp | TACAGGTTTAATTGGGAACTCAGGAAAATCCCGGGTTGCTTTACTCACAGGAACAGTGCTATCTGTAAGTaGTTCTGTTCGAGACTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: YRFNWELRKIPGCFTHRNSAICK*FCSRLV Trigger: TACAAGTCTCGAACAGAACAACTTACAGATAGCACT...GTTCCTGTGAGTAAAGCAACCCGGGATTTTCCTGAGTTCCCAATTAAACCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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| CDS TCA 72 bp | CTTCTCTGGAGGGAGGTTCCCTGTTCACAGGCTCCGTaGGGTATCCTGCTGCTTCCACATATGCCAGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLWREVPCSQAP*GILLLPHMPGS Trigger: TGAGCCTGGCATATGTGGAAGCAGCAGGATACCTCACGGAGCCTGTGAACAGGGAACCTCCCTCCAGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS GCA 72 bp | GGGAGGTTCCCTGTTCACAGGCTCCGTGAGGTATCCTaGTGCTTCCACATATGCCAGGCTCACTTGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRFPVHRLREVS*CFHICQAHLLP Trigger: AGGAAGCAAGTGAGCCTGGCATATGTGGAAGCAGCAGGATACCTCACGGAGCCTGTGAACAGGGAACCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS TCA 72 bp | GGAGCATGGGAAAATGCTCCAGGGCTCGGGATTTGCTaGGGACGTAACTGCTCTTCAGGCATTGACTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GAWENAPGLGIC*GRNCSSGIDSL Trigger: CAGGGAGTCAATGCCTGAAGAGCAGTTACGTCCTCAGCAAATCCCGAGCCCTGGAGCATTTTCCCATGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS TCA 72 bp | AGCCTGAACATTGAGAAAGGCCAGGCGGGTGCGCCGTaGGATCATGTCAACTGCAGTGCAGGCATACTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLNIEKGQAGAP*DHVNCSAGILL Trigger: AAGGAGTATGCCTGCACTGCAGTTGACATGATCTCACGGCGCACCCGCCTGGCCTTTCTCAATGTTCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS GCA 72 bp | AGGTTCCCTGTTCACAGGCTCCGTGAGGTATCCTGCTaGTTCCACATATGCCAGGCTCACTTGCTTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RFPVHRLREVSC*FHICQAHLLPS Trigger: AGAAGGAAGCAAGTGAGCCTGGCATATGTGGAAGCAGCAGGATACCTCACGGAGCCTGTGAACAGGGAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS CAA 72 bp | GCACTCCAACAACAGGCCACCGCTTTCCAGTCACACTaGCCATTTTGGCCACCTCGAAAGCCTTGTCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: ALQQQATAFQSH*PFWPPRKPCHH Trigger: ATGGTGACAAGGCTTTCGAGGTGGCCAAAATGGCAAGTGTGACTGGAAAGCGGTGGCCTGTTGTTGGAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS TCA 72 bp | CAGTCCTACTCGGTCCCGCATTCAAGTTGTGAAACTTaGCAGCTGCATCCACGGTATCTTCTGCCATGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QSYSVPHSSCET*QLHPRYLLPWS Trigger: GCTCCATGGCAGAAGATACCGTGGATGCAGCTGTCAAGTTTCACAACTTGAATGCGGGACCGAGTAGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS TCA 72 bp | AGCCCAACAGTCCTACTCGGTCCCGCATTCAAGTTGTaGAACTTGACAGCTGCATCCACGGTATCTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPTVLLGPAFKL*NLTAASTVSSA Trigger: GGCAGAAGATACCGTGGATGCAGCTGTCAAGTTTCACAACTTGAATGCGGGACCGAGTAGGACTGTTGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS GCA 72 bp | CACTCCAACAACAGGCCACCGCTTTCCAGTCACACTTaGCATTTTGGCCACCTCGAAAGCCTTGTCACCATA | + |
|
Preference number: 6 (lower is better) Translates to: HSNNRPPLSSHT*HFGHLESLVTI Trigger: TATGGTGACAAGGCTTTCGAGGTGGCCAAAATGGCAAGTGTGACTGGAAAGCGGTGGCCTGTTGTTGGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
||
| CDS TCA 72 bp | ATGTCAAATTCGGGTGTGTTCTTCAAAGTCATGAGCTaGGCTTCTCTGGAGGGAGGTTCCCTGTTCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: MSNSGVFFKVMS*ASLEGGSLFTG Trigger: GCCTGTGAACAGGGAACCTCCCTCCAGAGAAGCTCAGCTCATGACTTTGAAGAACACACCCGAATTTGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028167.3 ENSMUST00000112618.9 ENSMUST00000169687.8 |
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