Pregenerated sensors for GPD1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050627Ensembl transcript IDs: ENSMUST00000084853.4, ENSMUST00000129305.2, ENSMUST00000146623.8
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGCAGGTCAGAGAGGCCCAGGGACATCCTCGCAGGTCCCATCCTaGAGGGATGGAGGAATGTCCCCATGTCCCCAGGTGACCAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: TAGQRGPGTSSQVPS*RDGGMSPCPQVTRY Trigger: GTACCTGGTCACCTGGGGACATGGGGACATTCCTCCATCCCTCCAGGATGGGACCTGCGAGGATGTCCCTGGGCCTCTCTGACCTGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR CCA 90 bp | TCAGAGAGGCCCAGGGACATCCTCGCAGGTCCCATCCTGGAGGGATaGAGGAATGTCCCCATGTCCCCAGGTGACCAGGTACAGCTATGG | + |
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Preference number: 1 (lower is better) Translates to: SERPRDILAGPILEG*RNVPMSPGDQVQLW Trigger: CCATAGCTGTACCTGGTCACCTGGGGACATGGGGACATTCCTCCATCCCTCCAGGATGGGACCTGCGAGGATGTCCCTGGGCCTCTCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR TCA 90 bp | TTCACTGAGGTCGACATCCCCTTGTCTGTGCCTGACCCTGCATCCTaGAAGCTTTCTCAGGGGTTAGGCCAGAACTGCAAAGCCCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: FTEVDIPLSVPDPAS*KLSQGLGQNCKAQA Trigger: GGCCTGGGCTTTGCAGTTCTGGCCTAACCCCTGAGAAAGCTTTCAGGATGCAGGGTCAGGCACAGACAAGGGGATGTCGACCTCAGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR TCA 90 bp | CAGAACTGCAAAGCCCAGGCCACTCAGGAGACAGAGGCAAGAAGGTaGCAAATTCAAGGCCAGCCCAGGCTACATAGAACTCTCACAGGA | + |
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Preference number: 1 (lower is better) Translates to: QNCKAQATQETEARR*QIQGQPRLHRTLTG Trigger: TCCTGTGAGAGTTCTATGTAGCCTGGGCTGGCCTTGAATTTGTCACCTTCTTGCCTCTGTCTCCTGAGTGGCCTGGGCTTTGCAGTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR CCA 90 bp | TGCTGTAGTGAGCATCCGAAATGCATAGAAGGCATGTGGAAACACTaGATTCCTGGAGGAACACCAGGTATCTGGGGCTTGGCAGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: CCSEHPKCIEGMWKH*IPGGTPGIWGLAVG Trigger: TCCCACTGCCAAGCCCCAGATACCTGGTGTTCCTCCAGGAATCCAGTGTTTCCACATGCCTTCTATGCATTTCGGATGCTCACTACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR CCA 90 bp | GTGGCTCTCTGCTGTAGTGAGCATCCGAAATGCATAGAAGGCATGTaGAAACACTGGATTCCTGGAGGAACACCAGGTATCTGGGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: VALCCSEHPKCIEGM*KHWIPGGTPGIWGL Trigger: CAAGCCCCAGATACCTGGTGTTCCTCCAGGAATCCAGTGTTTCCACATGCCTTCTATGCATTTCGGATGCTCACTACAGCAGAGAGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR TCA 90 bp | CCAGCCACTGCAAGGATGTTCCTCCTCTGCCTTGCTGGGTCTGTATaGAAGCCCATTCTAGCAGCAAATGAAGAGGAAAGAGGCAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: PATARMFLLCLAGSV*KPILAANEEERGKE Trigger: TTCCTTGCCTCTTTCCTCTTCATTTGCTGCTAGAATGGGCTTTCATACAGACCCAGCAAGGCAGAGGAGGAACATCCTTGCAGTGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR CCA 90 bp | GTGGAGGAGTGCTTCTCCTGGCACAGAGACAAAGCTGTAACAATTTaGATGTATTCGAAGTACAGTTCAGCAGGATCCCACTGCCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: VEECFSWHRDKAVTI*MYSKYSSAGSHCQA Trigger: GGCTTGGCAGTGGGATCCTGCTGAACTGTACTTCGAATACATCCAAATTGTTACAGCTTTGTCTCTGTGCCAGGAGAAGCACTCCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR TCA 90 bp | CCTCTGCCTTGCTGGGTCTGTATGAAAGCCCATTCTAGCAGCAAATaGAGAGGAAAGAGGCAAGGAATGTGGTCTCTGTATCAAGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: PLPCWVCMKAHSSSK*RGKRQGMWSLYQED Trigger: GTCTTCTTGATACAGAGACCACATTCCTTGCCTCTTTCCTCTTCATTTGCTGCTAGAATGGGCTTTCATACAGACCCAGCAAGGCAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR GCA 90 bp | AAATTCTCTAGTGCAGTGGCTCTCTGCTGTAGTGAGCATCCGAAATaGATAGAAGGCATGTGGAAACACTGGATTCCTGGAGGAACACCA | + |
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Preference number: 1 (lower is better) Translates to: KFSSAVALCCSEHPK*IEGMWKHWIPGGTP Trigger: TGGTGTTCCTCCAGGAATCCAGTGTTTCCACATGCCTTCTATGCATTTCGGATGCTCACTACAGCAGAGAGCCACTGCACTAGAGAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR GCA 90 bp | AGCCGTCAATCCACAACCCAGGAGTTCATGCTGCTGGCTCTGAGATaGTGTTTAAAAGTGTGGTGGTCTTCAAACACACATATATGCAGA | + |
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Preference number: 1 (lower is better) Translates to: SRQSTTQEFMLLALR*CLKVWWSSNTHICR Trigger: TCTGCATATATGTGTGTTTGAAGACCACCACACTTTTAAACAGCATCTCAGAGCCAGCAGCATGAACTCCTGGGTTGTGGATTGACGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR TCA 90 bp | GCAAGGTTCAAGGGTAAACCTTGTAGACAAGGTCATGTCACAACATaGAAAAGTTGGGCATGCTCGACTAAAATTCCATATTCTGTAGCA | + |
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Preference number: 1 (lower is better) Translates to: ARFKGKPCRQGHVTT*KSWACSTKIPYSVA Trigger: TGCTACAGAATATGGAATTTTAGTCGAGCATGCCCAACTTTTTCATGTTGTGACATGACCTTGTCTACAAGGTTTACCCTTGAACCTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
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| 3UTR-3UTR TCA 90 bp | CAAACTTACTTGGCCATTCCAGGGTCCACCTGGCTTAGCCAGGAGACTCCAGGAGTGAAATGCCCCTGCTaGCTGGGGACACCACGTGGG | + |
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Preference number: 2 (lower is better) Translates to: QTYLAIPGSTWLSQETPGVKCPC*LGTPRG Trigger: CCCACGTGGTGTCCCCAGTCAGCAGGGGCATTTCAC...TCCTGGAGTCTCCTGGCTAAGCCAGGTGGACCCTGGAATGGCCAAGTAAGTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCACTCAGGAGACAGAGGCAAGAAGGTGACAAATTCAAGGCCAGCCCAGGCTAATGCCCCTGCTGACTaGGGACACCACGTGGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: GHSGDRGKKVTNSRPAQANAPAD*GHHVGG Trigger: ACCACCCACGTGGTGTCCCCAGTCAGCAGGGGCATT...AGCCTGGGCTGGCCTTGAATTTGTCACCTTCTTGCCTCTGTCTCCTGAGTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCAGGGACATCCTCGCAGGTCCCATCCTGGAGGGATGGAGGAATGTCCCCCTGCTGGCTCTGAGATaGTGTTTAAAAGTGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RPRDILAGPILEGWRNVPLLALR*CLKVWW Trigger: CCACCACACTTTTAAACAGCATCTCAGAGCCAGCAG...GGGGACATTCCTCCATCCCTCCAGGATGGGACCTGCGAGGATGTCCCTGGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCAGGAAGTCCCACCTTCCACTTCATGCCCAGCTAATCGGCCATCTGATTCCCATCCTGGAGGGATaGAGGAATGTCCCCATGTCC | + |
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Preference number: 2 (lower is better) Translates to: PPRKSHLPLHAQLIGHLIPILEG*RNVPMS Trigger: GGACATGGGGACATTCCTCCATCCCTCCAGGATGGG...AATCAGATGGCCGATTAGCTGGGCATGAAGTGGAAGGTGGGACTTCCTGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | GCGTGTGTGTCTGTAGTTGTTACCCGACACATCTTAGCCAGTGGAGGAGTGCTTCCCGGATTCCTCCAGTaGGCACAGCAGAGCTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: ACVSVVVTRHILASGGVLPGFLQ*AQQSCS Trigger: GGAACAGCTCTGCTGTGCCCACTGGAGGAATCCGGG...AAGCACTCCTCCACTGGCTAAGATGTGTCGGGTAACAACTACAGACACACACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR CAA 90 bp | CTAGGAAAGTGTGAAAAGTCAGGCAGCTGGGATGGCCAAACTTACTaGGCCATTCCAGGGTCCACCTGGCTTAGCCAGGAGACTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LGKCEKSGSWDGQTY*AIPGSTWLSQETPG Trigger: TCCTGGAGTCTCCTGGCTAAGCCAGGTGGACCCTGGAATGGCCAAGTAAGTTTGGCCATCCCAGCTGCCTGACTTTTCACACTTTCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR TCA 90 bp | ACATCATTCCTACAAACAGCAGGTCAGAGAGGCCCAGGGACATCCTCGCAGGTCCTATGGCTTCTTACATaGGAAGTGACAGTGGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: TSFLQTAGQRGPGTSSQVLWLLT*EVTVAP Trigger: GGGGGCCACTGTCACTTCTCATGTAAGAAGCCATAG...GACCTGCGAGGATGTCCCTGGGCCTCTCTGACCTGCTGTTTGTAGGAATGATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGACAGAGGCAAGAAGGTGACAAATTCAAGGCCAGCCCAGGCTACATAGAAGGAACACCAGGTATCTaGGGCTTGGCAGTGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: RRQRQEGDKFKASPGYIEGTPGI*GLAVGS Trigger: GGATCCCACTGCCAAGCCCCAGATACCTGGTGTTCC...TTCTATGTAGCCTGGGCTGGCCTTGAATTTGTCACCTTCTTGCCTCTGTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGAATGTCCCCATGTCCCCAGGTGACCAGGTACAGCTATGGCTTCTTACATGAGGAGTGCTTCTCCTaGCACAGAGACAAAGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: GGMSPCPQVTRYSYGFLHEECFS*HRDKAV Trigger: TACAGCTTTGTCTCTGTGCCAGGAGAAGCACTCCTC...ATGTAAGAAGCCATAGCTGTACCTGGTCACCTGGGGACATGGGGACATTCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGCTGAGTGAAATGCCCCTGCTGACTGGGGACACCACGTGGGTGGTGACTAATAGACACCTGATTTaGGTTCAGAGAAACACTCAC | + |
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Preference number: 2 (lower is better) Translates to: ILLSEMPLLTGDTTWVVTNRHLI*VQRNTH Trigger: GTGAGTGTTTCTCTGAACCCAAATCAGGTGTCTATT...AGTCACCACCCACGTGGTGTCCCCAGTCAGCAGGGGCATTTCACTCAGCAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGTCCCCAGCCACTGCAAGGATGTTCCTCCTCTGCCTTGCTGGGTCTGTACTTCACAAGCTGCCCTaGAGGGGAAATTTAAAATGT | + |
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Preference number: 2 (lower is better) Translates to: EVSPATARMFLLCLAGSVLHKLP*RGNLKC Trigger: ACATTTTAAATTTCCCCTCCAGGGCAGCTTGTGAAG...TACAGACCCAGCAAGGCAGAGGAGGAACATCCTTGCAGTGGCTGGGGACACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR TCA 90 bp | TACAAGGCCAGAGAGAGGGTGAATGTACACGAGGATGCAAAACACGTCAACAACCTATGGCTTCTTACATaGGAAGTGACAGTGGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: YKARERVNVHEDAKHVNNLWLLT*EVTVAP Trigger: GGGGGCCACTGTCACTTCTCATGTAAGAAGCCATAG...GTTGTTGACGTGTTTTGCATCCTCGTGTACATTCACCCTCTCTCTGGCCTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| 3UTR-3UTR GCA 90 bp | TTAACCCAGCCACCTAGCCCTATCCAGCCATGTGGCTACTTTCTAGTACCAAAAACATCCCCTTGTCTGTaGCTGACCCTGCATCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LTQPPSPIQPCGYFLVPKTSPCL*LTLHPE Trigger: TTCAGGATGCAGGGTCAGGCACAGACAAGGGGATGT...TTTTGGTACTAGAAAGTAGCCACATGGCTGGATAGGGCTAGGTGGCTGGGTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| 3UTR CAA 90 bp | AGTGGAGGAGTGCTTCTCCTGGCACAGAGACAAAGCTGTAACAATTaGGATGTATTCGAAGTACAGTTCAGCAGGATCCCACTGCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: SGGVLLLAQRQSCNN*DVFEVQFSRIPLPS Trigger: GCTTGGCAGTGGGATCCTGCTGAACTGTACTTCGAATACATCCAAATTGTTACAGCTTTGTCTCTGTGCCAGGAGAAGCACTCCTCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR CAA 90 bp | GCCATTCCAGGGTCCACCTGGCTTAGCCAGGAGACTCCAGGACACTaGTCTCTTATAGAGCATTGTTCAGCAAAGGCTGTAAATTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: AIPGSTWLSQETPGH*SLIEHCSAKAVNSL Trigger: TAGAGAATTTACAGCCTTTGCTGAACAATGCTCTATAAGAGACAAGTGTCCTGGAGTCTCCTGGCTAAGCCAGGTGGACCCTGGAATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | TTAACCCAGCCACCTAGCCCTATCCAGCCATGTGGCTACTTTCTAGTACCAAAAGAGGAGTGCTTCTCCTaGCACAGAGACAAAGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: LTQPPSPIQPCGYFLVPKEECFS*HRDKAV Trigger: TACAGCTTTGTCTCTGTGCCAGGAGAAGCACTCCTC...TTTTGGTACTAGAAAGTAGCCACATGGCTGGATAGGGCTAGGTGGCTGGGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | ACATCATTCCTACAAACAGCAGGTCAGAGAGGCCCAGGGACATCCTCGCAGGTCAATAGACACCTGATTTaGGTTCAGAGAAACACTCAC | + |
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Preference number: 2 (lower is better) Translates to: TSFLQTAGQRGPGTSSQVNRHLI*VQRNTH Trigger: GTGAGTGTTTCTCTGAACCCAAATCAGGTGTCTATT...GACCTGCGAGGATGTCCCTGGGCCTCTCTGACCTGCTGTTTGTAGGAATGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCTAATTCTAGCATCCAAAGCACTCACTCCATATAGTGTGCGTTTCACTGAGACACCACGTGGGTGGTaGCTTTCCCACTCTTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VLILASKALTPYSVRFTETPRGW*LSHSLP Trigger: TGGCAAAGAGTGGGAAAGTCACCACCCACGTGGTGT...CTCAGTGAAACGCACACTATATGGAGTGAGTGCTTTGGATGCTAGAATTAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAAGACTCTCATAGTCTAATGTGTTTGGGACGTATTAGCTTTATGGGTTCCCCCGGATTCCTCCAGTaGGCACAGCAGAGCTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: KQDSHSLMCLGRISFMGSPGFLQ*AQQSCS Trigger: GGAACAGCTCTGCTGTGCCCACTGGAGGAATCCGGG...GGAACCCATAAAGCTAATACGTCCCAAACACATTAGACTATGAGAGTCTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAAGACTCTCATAGTCTAATGTGTTTGGGACGTATTAGCTTTATGGGTTCCCCCATCCTGGAGGGATaGAGGAATGTCCCCATGTCC | + |
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Preference number: 2 (lower is better) Translates to: KQDSHSLMCLGRISFMGSPILEG*RNVPMS Trigger: GGACATGGGGACATTCCTCCATCCCTCCAGGATGGG...GGAACCCATAAAGCTAATACGTCCCAAACACATTAGACTATGAGAGTCTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAAGACTCTCATAGTCTAATGTGTTTGGGACGTATTAGCTTTATGGGTTCCTCGCAGGTCCCATCCTaGAGGGATGGAGGAATGTCC | + |
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Preference number: 2 (lower is better) Translates to: KQDSHSLMCLGRISFMGSSQVPS*RDGGMS Trigger: GGACATTCCTCCATCCCTCCAGGATGGGACCTGCGA...GGAACCCATAAAGCTAATACGTCCCAAACACATTAGACTATGAGAGTCTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAAACAAGACTCTCATAGTCTAATGTGTTTGGGACGTATTAGCTTTATGGGTAATGCCCCTGCTGACTaGGGACACCACGTGGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: EKQDSHSLMCLGRISFMGNAPAD*GHHVGG Trigger: ACCACCCACGTGGTGTCCCCAGTCAGCAGGGGCATT...ACCCATAAAGCTAATACGTCCCAAACACATTAGACTATGAGAGTCTTGTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCTAGCATCCAAAGCACTCACTCCATATAGTGTGCGTTTCACTGAGGTCGACAATTCTCTAGTGCAGTaGCTCTCTGCTGTAGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: ILASKALTPYSVRFTEVDNSLVQ*LSAVVS Trigger: GCTCACTACAGCAGAGAGCCACTGCACTAGAGAATT...GTCGACCTCAGTGAAACGCACACTATATGGAGTGAGTGCTTTGGATGCTAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCTAATTCTAGCATCCAAAGCACTCACTCCATATAGTGTGCGTTTCACTGAGAATTCTCTAGTGCAGTaGCTCTCTGCTGTAGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: VLILASKALTPYSVRFTENSLVQ*LSAVVS Trigger: GCTCACTACAGCAGAGAGCCACTGCACTAGAGAATT...CTCAGTGAAACGCACACTATATGGAGTGAGTGCTTTGGATGCTAGAATTAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCTAATTCTAGCATCCAAAGCACTCACTCCATATAGTGTGCGTTTCACTGAGCATTCTAGCAGCAAATaGAGAGGAAAGAGGCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: VLILASKALTPYSVRFTEHSSSK*RGKRQG Trigger: TCCTTGCCTCTTTCCTCTTCATTTGCTGCTAGAATG...CTCAGTGAAACGCACACTATATGGAGTGAGTGCTTTGGATGCTAGAATTAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAAACAAGACTCTCATAGTCTAATGTGTTTGGGACGTATTAGCTTTATGGGTACACATCTTAGCCAGTaGAGGAGTGCTTCTCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: EKQDSHSLMCLGRISFMGTHLSQ*RSASPG Trigger: GCCAGGAGAAGCACTCCTCCACTGGCTAAGATGTGT...ACCCATAAAGCTAATACGTCCCAAACACATTAGACTATGAGAGTCTTGTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAGAGGCAAGGAATGTGGTCTCTGTATCAAGAAGACACCTGTCTGTGGAGTATGCTGTTTAAAAGTGTaGTGGTCTTCAAACACACAT | + |
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Preference number: 2 (lower is better) Translates to: ERGKECGLCIKKTPVCGVCCLKV*WSSNTH Trigger: ATGTGTGTTTGAAGACCACCACACTTTTAAACAGCA...TACTCCACAGACAGGTGTCTTCTTGATACAGAGACCACATTCCTTGCCTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGGCTCTGAGATGCTGTTTAAAAGTGTGGTGGTCTTCAAACACACATATTCCCTTGCATATAAATaGGTCACAGCCATAACATTT | + |
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Preference number: 2 (lower is better) Translates to: AAGSEMLFKSVVVFKHTYSLAYK*VTAITF Trigger: AAATGTTATGGCTGTGACTCATTTATATGCAAGGGA...ATATGTGTGTTTGAAGACCACCACACTTTTAAACAGCATCTCAGAGCCAGCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR-3UTR TCA 90 bp | AAACAAGACTCTCATAGTCTAATGTGTTTGGGACGTATTAGCTTTATGGGTTCCCATTCTAGCAGCAAATaGAGAGGAAAGAGGCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: KQDSHSLMCLGRISFMGSHSSSK*RGKRQG Trigger: TCCTTGCCTCTTTCCTCTTCATTTGCTGCTAGAATG...GGAACCCATAAAGCTAATACGTCCCAAACACATTAGACTATGAGAGTCTTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR CAA 90 bp | TCTGCATTGTGCTACTTTGTAGACACCACGGTAGCTCTCAGCCCTTaGGATATCTTAAAAAGTAACTCTTTGTTACATATGTACAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: SALCYFVDTTVALSP*DILKSNSLLHMYRV Trigger: AACTCTGTACATATGTAACAAAGAGTTACTTTTTAAGATATCCAAAGGGCTGAGAGCTACCGTGGTGTCTACAAAGTAGCACAATGCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| 3UTR GCA 72 bp | CCCAAGTACCCTGGCCTCATCCCCTCATCCGCCCGCTaGGACTGTCCAAGGACCAGCAGCCCAGGCAACGGG | + |
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Preference number: 3 (lower is better) Translates to: PKYPGLIPSSAR*DCPRTSSPGNG Trigger: CCCGTTGCCTGGGCTGCTGGTCCTTGGACAGTCGCAGCGGGCGGATGAGGGGATGAGGCCAGGGTACTTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
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| 3UTR CCA 72 bp | CCCAGGGACATCCTCGCAGGTCCCATCCTGGAGGGATaGAGGAATGTCCCCATGTCCCCAGGTGACCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: PRDILAGPILEG*RNVPMSPGDQV Trigger: TACCTGGTCACCTGGGGACATGGGGACATTCCTCCATCCCTCCAGGATGGGACCTGCGAGGATGTCCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR TCA 72 bp | TGCGATCTCACCACAGCACCCTTCTTAGGCCAGCTATaGAAACACCAGAAGGCAGGCTCTGCCCCAGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CDLTTAPFLGQL*KHQKAGSAPGV Trigger: CACCCCTGGGGCAGAGCCTGCCTTCTGGTGTTTTCATAGCTGGCCTAAGAAGGGTGCTGTGGTGAGATCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCAGAGAGGCCCAGGGACATCCTCGCAGGTCCCATCCTGGAGGGATGGAGGAGTTCCTCCCTTCCCTaGCATATAAATGAGTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: RSERPRDILAGPILEGWRSSSLP*HINESQ Trigger: CTGTGACTCATTTATATGCAAGGGAAGGGAGGAACT...CCTCCATCCCTCCAGGATGGGACCTGCGAGGATGTCCCTGGGCCTCTCTGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR CCA 72 bp | TCTAAACAGTTCCTTCCTGTCATATCCCAAGTACCCTaGCCTCATCCCCTCATCCGCCCGCTGCGACTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SKQFLPVISQVP*PHPLIRPLRLS Trigger: GGACAGTCGCAGCGGGCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAGGAACTGTTTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCAGGAAGTCCCACCTTCCACTTCATGCCCAGCTAATCGGCCATCTGATTGATGGCCAAACTTACTaGGCCATTCCAGGGTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: PPRKSHLPLHAQLIGHLIDGQTY*AIPGST Trigger: GGTGGACCCTGGAATGGCCAAGTAAGTTTGGCCATC...AATCAGATGGCCGATTAGCTGGGCATGAAGTGGAAGGTGGGACTTCCTGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
||
| 3UTR TCA 72 bp | TCCCCAGGTGACCAGGTACAGCTATGGCTTCTTACATaGGAAGTGACAGTGGCCCCCTTGAGGGTTCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SPGDQVQLWLLT*EVTVAPLRVPS Trigger: GGAAGGAACCCTCAAGGGGGCCACTGTCACTTCTCATGTAAGAAGCCATAGCTGTACCTGGTCACCTGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR GCA 72 bp | GTGTGCGTTTCACTGAGGTCGACATCCCCTTGTCTGTaGCTGACCCTGCATCCTGAAAGCTTTCTCAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VCVSLRSTSPCL*LTLHPESFLRG Trigger: ACCCCTGAGAAAGCTTTCAGGATGCAGGGTCAGGCACAGACAAGGGGATGTCGACCTCAGTGAAACGCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR CCA 72 bp | CTGAGTGAAATGCCCCTGCTGACTGGGGACACCACGTaGGTGGTGACTTTCCCACTCTTTGCCACACAAATC | + |
|
Preference number: 3 (lower is better) Translates to: LSEMPLLTGDTT*VVTFPLFATQI Trigger: GATTTGTGTGGCAAAGAGTGGGAAAGTCACCACCCACGTGGTGTCCCCAGTCAGCAGGGGCATTTCACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR CCA 72 bp | GTGAAAAGTCAGGCAGCTGGGATGGCCAAACTTACTTaGCCATTCCAGGGTCCACCTGGCTTAGCCAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VKSQAAGMAKLT*PFQGPPGLARR Trigger: TCTCCTGGCTAAGCCAGGTGGACCCTGGAATGGCCAAGTAAGTTTGGCCATCCCAGCTGCCTGACTTTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGTGCAGTGGCTCTCTGCTGTAGTGAGCATCCGAAATGCATAGAAGGCATGGTGACAGTGGCCCCCTaGAGGGTTCCTTCCACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSAVALCCSEHPKCIEGMVTVAP*RVPSTS Trigger: GCTTGTGGAAGGAACCCTCAAGGGGGCCACTGTCAC...CATGCCTTCTATGCATTTCGGATGCTCACTACAGCAGAGAGCCACTGCACTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR TCA 72 bp | GTCGACATCCCCTTGTCTGTGCCTGACCCTGCATCCTaGAAGCTTTCTCAGGGGTTAGGCCAGAACTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VDIPLSVPDPAS*KLSQGLGQNCK Trigger: TTTGCAGTTCTGGCCTAACCCCTGAGAAAGCTTTCAGGATGCAGGGTCAGGCACAGACAAGGGGATGTCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR GCA 72 bp | GTCCCCAGCCACTGCAAGGATGTTCCTCCTCTGCCTTaGTGGGTCTGTATGAAAGCCCATTCTAGCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VPSHCKDVPPLP*WVCMKAHSSSK Trigger: TTTGCTGCTAGAATGGGCTTTCATACAGACCCAGCAAGGCAGAGGAGGAACATCCTTGCAGTGGCTGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR CCA 72 bp | GATGGCCAAACTTACTTGGCCATTCCAGGGTCCACCTaGCTTAGCCAGGAGACTCCAGGACACTTGTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: DGQTYLAIPGST*LSQETPGHLSL Trigger: AAGAGACAAGTGTCCTGGAGTCTCCTGGCTAAGCCAGGTGGACCCTGGAATGGCCAAGTAAGTTTGGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR CCA 72 bp | CTCCCCACTCTAGGAAAGTGTGAAAAGTCAGGCAGCTaGGATGGCCAAACTTACTTGGCCATTCCAGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LPTLGKCEKSGS*DGQTYLAIPGS Trigger: GGACCCTGGAATGGCCAAGTAAGTTTGGCCATCCCAGCTGCCTGACTTTTCACACTTTCCTAGAGTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR CCA 72 bp | GAAATGCATAGAAGGCATGTGGAAACACTGGATTCCTaGAGGAACACCAGGTATCTGGGGCTTGGCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EMHRRHVETLDS*RNTRYLGLGSG Trigger: CCCACTGCCAAGCCCCAGATACCTGGTGTTCCTCCAGGAATCCAGTGTTTCCACATGCCTTCTATGCATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR CCA 72 bp | TGTGTCTGTAGTTGTTACCCGACACATCTTAGCCAGTaGAGGAGTGCTTCTCCTGGCACAGAGACAAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CVCSCYPTHLSQ*RSASPGTETKL Trigger: CAGCTTTGTCTCTGTGCCAGGAGAAGCACTCCTCCACTGGCTAAGATGTGTCGGGTAACAACTACAGACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR CCA 72 bp | GAGCATCCGAAATGCATAGAAGGCATGTGGAAACACTaGATTCCTGGAGGAACACCAGGTATCTGGGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: EHPKCIEGMWKH*IPGGTPGIWGL Trigger: CAAGCCCCAGATACCTGGTGTTCCTCCAGGAATCCAGTGTTTCCACATGCCTTCTATGCATTTCGGATGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAAGGCCAGAGAGAGGGTGAATGTACACGAGGATGCAAAACACGTCAACAACTGTTCCTCCTCTGCCTaGCTGGGTCTGTATGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: YKARERVNVHEDAKHVNNCSSSA*LGLYES Trigger: GCTTTCATACAGACCCAGCAAGGCAGAGGAGGAACA...GTTGTTGACGTGTTTTGCATCCTCGTGTACATTCACCCTCTCTCTGGCCTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
||
| 3UTR GCA 72 bp | AGTGCAGTGGCTCTCTGCTGTAGTGAGCATCCGAAATaGATAGAAGGCATGTGGAAACACTGGATTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SAVALCCSEHPK*IEGMWKHWIPG Trigger: TCCAGGAATCCAGTGTTTCCACATGCCTTCTATGCATTTCGGATGCTCACTACAGCAGAGAGCCACTGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR TCA 72 bp | GCAAGGATGTTCCTCCTCTGCCTTGCTGGGTCTGTATaGAAGCCCATTCTAGCAGCAAATGAAGAGGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ARMFLLCLAGSV*KPILAANEEER Trigger: TCTTTCCTCTTCATTTGCTGCTAGAATGGGCTTTCATACAGACCCAGCAAGGCAGAGGAGGAACATCCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR GCA 72 bp | GTCAGAAGTGGCAGAGAAACAATTCTGTTTAGACACTaGGATCTCACCACAGCACCCTTCTTAGGCCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VRSGRETILFRH*DLTTAPFLGQL Trigger: TAGCTGGCCTAAGAAGGGTGCTGTGGTGAGATCGCAGTGTCTAAACAGAATTGTTTCTCTGCCACTTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGACAGAGGCAAGAAGGTGACAAATTCAAGGCCAGCCCAGGCTACATAGAAGAGACTCCAGGACACTaGTCTCTTATAGAGCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: RRQRQEGDKFKASPGYIEETPGH*SLIEHC Trigger: ACAATGCTCTATAAGAGACAAGTGTCCTGGAGTCTC...TTCTATGTAGCCTGGGCTGGCCTTGAATTTGTCACCTTCTTGCCTCTGTCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR GCA 72 bp | AGCAAAGGCTGTAAATTCTCTAGTGCAGTGGCTCTCTaGTGTAGTGAGCATCCGAAATGCATAGAAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: SKGCKFSSAVAL*CSEHPKCIEGM Trigger: CATGCCTTCTATGCATTTCGGATGCTCACTACAGCAGAGAGCCACTGCACTAGAGAATTTACAGCCTTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR TCA 72 bp | TGCTGGGTCTGTATGAAAGCCCATTCTAGCAGCAAATaGAGAGGAAAGAGGCAAGGAATGTGGTCTCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: CWVCMKAHSSSK*RGKRQGMWSLY Trigger: ATACAGAGACCACATTCCTTGCCTCTTTCCTCTTCATTTGCTGCTAGAATGGGCTTTCATACAGACCCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR TCA 72 bp | CACAGGAAGTTAGTCATCCTGAATTCCTGTGGAGAGTaGGGGTCACCTCACTCTATAGGAGTATTCTCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: HRKLVILNSCGE*GSPHSIGVFSR Trigger: TCTAGAGAATACTCCTATAGAGTGAGGTGACCCTCACTCTCCACAGGAATTCAGGATGACTAACTTCCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR GCA 72 bp | CACACACACAAACACTCTCACACACATTCACTCATGTaGGTGTGTGTCTGTAGTTGTTACCCGACACATCTT | + |
|
Preference number: 3 (lower is better) Translates to: HTHKHSHTHSLM*VCVCSCYPTHL Trigger: AAGATGTGTCGGGTAACAACTACAGACACACACGCACATGAGTGAATGTGTGTGAGAGTGTTTGTGTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTGGCTCTGAGATGCTGTTTAAAAGTGTGGTGGTCTTCAAACACACATATAGTTCCTCCCTTCCCTaGCATATAAATGAGTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: AAGSEMLFKSVVVFKHTYSSSLP*HINESQ Trigger: CTGTGACTCATTTATATGCAAGGGAAGGGAGGAACT...ATATGTGTGTTTGAAGACCACCACACTTTTAAACAGCATCTCAGAGCCAGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAAACAAGACTCTCATAGTCTAATGTGTTTGGGACGTATTAGCTTTATGGGTGATGGCCAAACTTACTaGGCCATTCCAGGGTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: EKQDSHSLMCLGRISFMGDGQTY*AIPGST Trigger: GGTGGACCCTGGAATGGCCAAGTAAGTTTGGCCATC...ACCCATAAAGCTAATACGTCCCAAACACATTAGACTATGAGAGTCTTGTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR CCA 72 bp | TTCATGCTGCTGGCTCTGAGATGCTGTTTAAAAGTGTaGTGGTCTTCAAACACACATATATGCAGACGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: FMLLALRCCLKV*WSSNTHICRRF Trigger: AAAACGTCTGCATATATGTGTGTTTGAAGACCACCACACTTTTAAACAGCATCTCAGAGCCAGCAGCATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| 3UTR TCA 72 bp | AAGGGTAAACCTTGTAGACAAGGTCATGTCACAACATaGAAAAGTTGGGCATGCTCGACTAAAATTCCATAT | + |
|
Preference number: 3 (lower is better) Translates to: KGKPCRQGHVTT*KSWACSTKIPY Trigger: ATATGGAATTTTAGTCGAGCATGCCCAACTTTTTCATGTTGTGACATGACCTTGTCTACAAGGTTTACCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| 3UTR GCA 72 bp | TGGGCATGCTCGACTAAAATTCCATATTCTGTAGCATaGTTAATCTATGGAATCACTCTTTTTAACGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: WACSTKIPYSVA*LIYGITLFNEL Trigger: TAATTCGTTAAAAAGAGTGATTCCATAGATTAAGCATGCTACAGAATATGGAATTTTAGTCGAGCATGCCCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR CCA 90 bp | CCCTGGCCTCATCCCCTCATCCGCCCGCTGCGACTGTCCAAGGACCAGCAGCCCTCTCCAGCTCTTCGATaGTCTTCCCAGTCCTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PWPHPLIRPLRLSKDQQPSPALR*SSQSWR Trigger: TCGCCAGGACTGGGAAGACCATCGAAGAGCTGGAGA...GGGCTGCTGGTCCTTGGACAGTCGCAGCGGGCGGATGAGGGGATGAGGCCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR TCA 90 bp | AGGTCAGAGAGGCCCAGGGACATCCTCGCAGGTCCCATCCTGGAGGGATGGAGGAGGACAGCATCTGCGTaGCAGGCCTGCCTTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSERPRDILAGPILEGWRRTASA*QACLHS Trigger: GCTATGAAGGCAGGCCTGTCACGCAGATGCTGTCCT...CCTCCATCCCTCCAGGATGGGACCTGCGAGGATGTCCCTGGGCCTCTCTGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTGGCCTCATCCCCTCATCCGCCCGCTGCGACTGTCCAAGGACCAGCAGCCTCTGCATCACTTTGCTaGCAATGGTGGTCTCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLASSPHPPAATVQGPAASASLC*QWWSRR Trigger: TCTGCGAGACCACCATTGGCAGCAAAGTGATGCAGA...GGCTGCTGGTCCTTGGACAGTCGCAGCGGGCGGATGAGGGGATGAGGCCAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCCTCATCCCCTCATCCGCCCGCTGCGACTGTCCAAGGACCAGCAGCCCAAGAGAAGGCCGTTCTaGATCACTTTGCTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PWPHPLIRPLRLSKDQQPKRRPF*ITLLPM Trigger: CATTGGCAGCAAAGTGATGCAGAACGGCCTTCTCTT...GGGCTGCTGGTCCTTGGACAGTCGCAGCGGGCGGATGAGGGGATGAGGCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR GCA 90 bp | TCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCATCCGCCCGCTGCGACTTCCAGCAGCCCCTTCTaGCTGAGGATGCGGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: SCHIPSTLASSPHPPAATSSSPF*LRMRYT Trigger: GGTGTACCGCATCCTCAGGCAGAAGGGGCTGCTGGA...AGTCGCAGCGGGCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR CCA 90 bp | CCCCTCATCCGCCCGCTGCGACTGTCCAAGGACCAGCAGCCCAGGCAACGGGGATCACTTTGCTGCCAATaGTGGTCTCGCAGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLIRPLRLSKDQQPRQRGSLCCQ*WSRRTS Trigger: AGAAGTTCTGCGAGACCACCATTGGCAGCAAAGTGA...TCCCCGTTGCCTGGGCTGCTGGTCCTTGGACAGTCGCAGCGGGCGGATGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR CCA 90 bp | CAGTTCCTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCATCCGCCCGAGCTCTCCAAGAAGGTaGCCGTGGACACCTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QFLPVISQVPWPHPLIRPSSPRR*PWTPGP Trigger: AGGGCCAGGTGTCCACGGCCACCTTCTTGGAGAGCT...CGGGCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAGGAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR TCA 90 bp | CCCTGGCCTCATCCCCTCATCCGCCCGCTGCGACTGTCCAAGGACCAGCAGCCCTTTCGTGGTCATTGTTaGTTATGTCTGTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PWPHPLIRPLRLSKDQQPFRGHC*LCLSAS Trigger: GGAAGCTGACAGACATAATCAACAATGACCACGAAA...GGGCTGCTGGTCCTTGGACAGTCGCAGCGGGCGGATGAGGGGATGAGGCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR CCA 90 bp | GGCCACTCAGGAGACAGAGGCAAGAAGGTGACAAATTCAAGGCCAGCCCAGGCTCAGATGTGCTCTGGGTaGCTCTGCAGGCAGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHSGDRGKKVTNSRPAQAQMCSG*LCRQDS Trigger: GCTGTCCTGCCTGCAGAGCCACCCAGAGCACATCTG...AGCCTGGGCTGGCCTTGAATTTGTCACCTTCTTGCCTCTGTCTCCTGAGTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTCCTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCATCCGCCCGCCCCCATCAGCACACTaGTGTCGATCCCCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFLPVISQVPWPHPLIRPPPSAH*CRSPSS Trigger: AGAAGATGGGGATCGACATCAGTGTGCTGATGGGGG...CGGGCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAGGAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR GCA 90 bp | AAACAGTTCCTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCATCCGCTCCCCGAGCCCACGATaGACACTTTCAGAGGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KQFLPVISQVPWPHPLIRSPSPR*TLSEAP Trigger: CGGCGCCTCTGAAAGTGTGCATCGTGGGCTCGGGGA...GCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAGGAACTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR GCA 90 bp | CCTCCCAGGAAGTCCCACCTTCCACTTCATGCCCAGCTAATCGGCCATCTGATTTCCAGCAGCCCCTTCTaGCTGAGGATGCGGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: PPRKSHLPLHAQLIGHLISSSPF*LRMRYT Trigger: GGTGTACCGCATCCTCAGGCAGAAGGGGCTGCTGGA...AATCAGATGGCCGATTAGCTGGGCATGAAGTGGAAGGTGGGACTTCCTGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
||
| CDS-3UTR CCA 90 bp | TCATATCCCAAGTACCCTGGCCTCATCCCCTCATCCGCCCGCTGCGACTGTCCACTTTGCTGCCAATGGTaGTCTCGCAGAACTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SYPKYPGLIPSSARCDCPLCCQW*SRRTSP Trigger: CGGAGAAGTTCTGCGAGACCACCATTGGCAGCAAAG...TGGACAGTCGCAGCGGGCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR TCA 90 bp | TCTAGTGCAGTGGCTCTCTGCTGTAGTGAGCATCCGAAATGCATAGAAGGCATGACCTCCGCAGAGGTCTaGGGTCCCTGCAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSAVALCCSEHPKCIEGMTSAEV*GPCSFC Trigger: GCAGAAGCTGCAGGGACCTCAGACCTCTGCGGAGGT...CATGCCTTCTATGCATTTCGGATGCTCACTACAGCAGAGAGCCACTGCACTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGACAGAGGCAAGAAGGTGACAAATTCAAGGCCAGCCCAGGCTACATAGAAACCTCCGCAGAGGTCTaGGGTCCCTGCAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRQRQEGDKFKASPGYIETSAEV*GPCSFC Trigger: GCAGAAGCTGCAGGGACCTCAGACCTCTGCGGAGGT...TTCTATGTAGCCTGGGCTGGCCTTGAATTTGTCACCTTCTTGCCTCTGTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTCCTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCATCCGCCCGGTGGAGGAGAATTTCTaGAGGGTCTTCACGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QFLPVISQVPWPHPLIRPVEENF*RVFTLL Trigger: CAGCAACGTGAAGACCCTGCAGAAATTCTCCTCCAC...CGGGCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAGGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR CCA 90 bp | GGCCACTCAGGAGACAGAGGCAAGAAGGTGACAAATTCAAGGCCAGCCCAGGCTCTTTGCTGCCAATGGTaGTCTCGCAGAACTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GHSGDRGKKVTNSRPAQALCCQW*SRRTSP Trigger: CGGAGAAGTTCTGCGAGACCACCATTGGCAGCAAAG...AGCCTGGGCTGGCCTTGAATTTGTCACCTTCTTGCCTCTGTCTCCTGAGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
||
| 3UTR CAA 72 bp | TGTGAAAAGTCAGGCAGCTGGGATGGCCAAACTTACTaGGCCATTCCAGGGTCCACCTGGCTTAGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CEKSGSWDGQTY*AIPGSTWLSQE Trigger: CTCCTGGCTAAGCCAGGTGGACCCTGGAATGGCCAAGTAAGTTTGGCCATCCCAGCTGCCTGACTTTTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| CDS-3UTR TCA 90 bp | AAATCTAAACAGTTCCTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCACCTCCGCAGAGGTCTaGGGTCCCTGCAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSKQFLPVISQVPWPHPLTSAEV*GPCSFC Trigger: GCAGAAGCTGCAGGGACCTCAGACCTCTGCGGAGGT...GAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAGGAACTGTTTAGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
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| CDS-3UTR CCA 90 bp | AAATCTAAACAGTTCCTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCCCGCAGCGACCTCACTaGCGATGTTGGCCCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KSKQFLPVISQVPWPHPLPQRPH*RCWPPS Trigger: TGATGGGGGCCAACATCGCCAGTGAGGTCGCTGCGG...GAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAGGAACTGTTTAGATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR TCA 90 bp | TCTAGTGCAGTGGCTCTCTGCTGTAGTGAGCATCCGAAATGCATAGAAGGCATGAGGACAGCATCTGCGTaGCAGGCCTGCCTTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSAVALCCSEHPKCIEGMRTASA*QACLHS Trigger: GCTATGAAGGCAGGCCTGTCACGCAGATGCTGTCCT...CATGCCTTCTATGCATTTCGGATGCTCACTACAGCAGAGAGCCACTGCACTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| CDS-3UTR GCA 90 bp | ATTCTAGCATCCAAAGCACTCACTCCATATAGTGTGCGTTTCACTGAGGTCGACTCCCCGAGCCCACGATaGACACTTTCAGAGGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILASKALTPYSVRFTEVDSPSPR*TLSEAP Trigger: CGGCGCCTCTGAAAGTGTGCATCGTGGGCTCGGGGA...GTCGACCTCAGTGAAACGCACACTATATGGAGTGAGTGCTTTGGATGCTAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAGTTCATGCTGCTGGCTCTGAGATGCTGTTTAAAAGTGTGGTGGTCTTCATGCTCTGGGTGGCTCTaGAGGCAGGACAGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QEFMLLALRCCLKVWWSSCSGWL*RQDSIC Trigger: GCAGATGCTGTCCTGCCTGCAGAGCCACCCAGAGCA...TGAAGACCACCACACTTTTAAACAGCATCTCAGAGCCAGCAGCATGAACTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| CDS-3UTR CCA 90 bp | ATGCATAGAAGGCATGTGGAAACACTGGATTCCTGGAGGAACACCAGGTATCTGAGCTCTCCAAGAAGGTaGCCGTGGACACCTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MHRRHVETLDSWRNTRYLSSPRR*PWTPGP Trigger: AGGGCCAGGTGTCCACGGCCACCTTCTTGGAGAGCT...CAGATACCTGGTGTTCCTCCAGGAATCCAGTGTTTCCACATGCCTTCTATGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| CDS-3UTR CCA 90 bp | CAGGAGTTCATGCTGCTGGCTCTGAGATGCTGTTTAAAAGTGTGGTGGTCTTCACAGATGTGCTCTGGGTaGCTCTGCAGGCAGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QEFMLLALRCCLKVWWSSQMCSG*LCRQDS Trigger: GCTGTCCTGCCTGCAGAGCCACCCAGAGCACATCTG...TGAAGACCACCACACTTTTAAACAGCATCTCAGAGCCAGCAGCATGAACTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| CDS-3UTR GCA 90 bp | CATTCCTACAAACAGCAGGTCAGAGAGGCCCAGGGACATCCTCGCAGGTCCCATGCAGATCTGATACACTaGAGTGAAGAGGGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: HSYKQQVREAQGHPRRSHADLIH*SEEGKL Trigger: AAGTTTCCCCTCTTCACTGCAGTGTATCAGATCTGC...ATGGGACCTGCGAGGATGTCCCTGGGCCTCTCTGACCTGCTGTTTGTAGGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGAGGAGTGCTTCTCCTGGCACAGAGACAAAGCTGTAACAATTTGGATGTATGCTCTGGGTGGCTCTaGAGGCAGGACAGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGGVLLLAQRQSCNNLDVCSGWL*RQDSIC Trigger: GCAGATGCTGTCCTGCCTGCAGAGCCACCCAGAGCA...TACATCCAAATTGTTACAGCTTTGTCTCTGTGCCAGGAGAAGCACTCCTCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAGTGCTTCTCCTGGCACAGAGACAAAGCTGTAACAATTTGGATGTATTCGAGCTCTCCAAGAAGGTaGCCGTGGACACCTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EECFSWHRDKAVTIWMYSSSPRR*PWTPGP Trigger: AGGGCCAGGTGTCCACGGCCACCTTCTTGGAGAGCT...CGAATACATCCAAATTGTTACAGCTTTGTCTCTGTGCCAGGAGAAGCACTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGTTCCTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCATCCGCCAAAGACCCACATCTTaGCGGTGGAGGAGAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQFLPVISQVPWPHPLIRQRPTS*RWRRIS Trigger: AGAAATTCTCCTCCACCGTCAAGATGTGGGTCTTTG...GCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAGGAACTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
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| CDS-3UTR CCA 90 bp | CCTCCCAGGAAGTCCCACCTTCCACTTCATGCCCAGCTAATCGGCCATCTGATTTGGCAGCTTGTGTCCTaGGAGATATTTCACGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPRKSHLPLHAQLIGHLIWQLVS*EIFHVF Trigger: GAAAACGTGAAATATCTCCCAGGACACAAGCTGCCA...AATCAGATGGCCGATTAGCTGGGCATGAAGTGGAAGGTGGGACTTCCTGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
||
| CDS-3UTR CCA 90 bp | AATCTAAACAGTTCCTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCAAGCGACCACATTCTCTaGCAGCTTGTGTCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLNSSFLSYPKYPGLIPSSDHIL*QLVSWE Trigger: CTCCCAGGACACAAGCTGCCAGAGAATGTGGTCGCT...TGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAGGAACTGTTTAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
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| 3UTR CAA 72 bp | GGGTCCACCTGGCTTAGCCAGGAGACTCCAGGACACTaGTCTCTTATAGAGCATTGTTCAGCAAAGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSTWLSQETPGH*SLIEHCSAKAV Trigger: TACAGCCTTTGCTGAACAATGCTCTATAAGAGACAAGTGTCCTGGAGTCTCCTGGCTAAGCCAGGTGGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| CDS-3UTR TCA 90 bp | AATCTAAACAGTTCCTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCATCTGCAGCAGCTCTTTaGAGAGAAGGCCGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLNSSFLSYPKYPGLIPSSAAAL*REGRSA Trigger: TGCAGAACGGCCTTCTCTTCAAAGAGCTGCTGCAGA...TGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAGGAACTGTTTAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR CCA 90 bp | AAACAGTTCCTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCATCCGCTGGCAGCTTGTGTCCTaGGAGATATTTCACGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQFLPVISQVPWPHPLIRWQLVS*EIFHVF Trigger: GAAAACGTGAAATATCTCCCAGGACACAAGCTGCCA...GCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAGGAACTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
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| CDS-3UTR CCA 90 bp | GCGTGTGTGTCTGTAGTTGTTACCCGACACATCTTAGCCAGTGGAGGAGTGCTTTCACTTTGCTGCCAATaGTGGTCTCGCAGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ACVSVVVTRHILASGGVLSLCCQ*WSRRTS Trigger: AGAAGTTCTGCGAGACCACCATTGGCAGCAAAGTGA...AAGCACTCCTCCACTGGCTAAGATGTGTCGGGTAACAACTACAGACACACACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| CDS-3UTR CCA 90 bp | GAAAGAGGCAAGGAATGTGGTCTCTGTATCAAGAAGACACCTGTCTGTGGAGTATCTCCAGCTCTTCGATaGTCTTCCCAGTCCTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ERGKECGLCIKKTPVCGVSPALR*SSQSWR Trigger: TCGCCAGGACTGGGAAGACCATCGAAGAGCTGGAGA...TACTCCACAGACAGGTGTCTTCTTGATACAGAGACCACATTCCTTGCCTCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| CDS-3UTR TCA 90 bp | TCTAGTGCAGTGGCTCTCTGCTGTAGTGAGCATCCGAAATGCATAGAAGGCATGCAAAGACCCACATCTTaGCGGTGGAGGAGAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSAVALCCSEHPKCIEGMQRPTS*RWRRIS Trigger: AGAAATTCTCCTCCACCGTCAAGATGTGGGTCTTTG...CATGCCTTCTATGCATTTCGGATGCTCACTACAGCAGAGAGCCACTGCACTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| CDS-3UTR TCA 90 bp | ATTCTAGCATCCAAAGCACTCACTCCATATAGTGTGCGTTTCACTGAGGTCGACTCTGCAGCAGCTCTTTaGAGAGAAGGCCGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILASKALTPYSVRFTEVDSAAAL*REGRSA Trigger: TGCAGAACGGCCTTCTCTTCAAAGAGCTGCTGCAGA...GTCGACCTCAGTGAAACGCACACTATATGGAGTGAGTGCTTTGGATGCTAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| CDS-3UTR CCA 90 bp | GTTCTAATTCTAGCATCCAAAGCACTCACTCCATATAGTGTGCGTTTCACTGAGAGCGACCACATTCTCTaGCAGCTTGTGTCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLILASKALTPYSVRFTESDHIL*QLVSWE Trigger: CTCCCAGGACACAAGCTGCCAGAGAATGTGGTCGCT...CTCAGTGAAACGCACACTATATGGAGTGAGTGCTTTGGATGCTAGAATTAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| CDS-3UTR TCA 90 bp | AGGAGACAGAGGCAAGAAGGTGACAAATTCAAGGCCAGCCCAGGCTACATAGAATTTCGTGGTCATTGTTaGTTATGTCTGTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRQRQEGDKFKASPGYIEFRGHC*LCLSAS Trigger: GGAAGCTGACAGACATAATCAACAATGACCACGAAA...TTCTATGTAGCCTGGGCTGGCCTTGAATTTGTCACCTTCTTGCCTCTGTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| CDS-3UTR GCA 90 bp | GCTGCTGGCTCTGAGATGCTGTTTAAAAGTGTGGTGGTCTTCAAACACACATATGTGGAGGAGAATTTCTaGAGGGTCTTCACGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAGSEMLFKSVVVFKHTYVEENF*RVFTLL Trigger: CAGCAACGTGAAGACCCTGCAGAAATTCTCCTCCAC...ATATGTGTGTTTGAAGACCACCACACTTTTAAACAGCATCTCAGAGCCAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| CDS-3UTR GCA 90 bp | GAAAAACAAGACTCTCATAGTCTAATGTGTTTGGGACGTATTAGCTTTATGGGTTCCAGCAGCCCCTTCTaGCTGAGGATGCGGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: EKQDSHSLMCLGRISFMGSSSPF*LRMRYT Trigger: GGTGTACCGCATCCTCAGGCAGAAGGGGCTGCTGGA...ACCCATAAAGCTAATACGTCCCAAACACATTAGACTATGAGAGTCTTGTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| CDS-3UTR GCA 90 bp | GAAAGAGGCAAGGAATGTGGTCTCTGTATCAAGAAGACACCTGTCTGTGGAGTAGCAGATCTGATACACTaGAGTGAAGAGGGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: ERGKECGLCIKKTPVCGVADLIH*SEEGKL Trigger: AAGTTTCCCCTCTTCACTGCAGTGTATCAGATCTGC...TACTCCACAGACAGGTGTCTTCTTGATACAGAGACCACATTCCTTGCCTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| 3UTR CAA 72 bp | CCAGGAGACTCCAGGACACTTGTCTCTTATAGAGCATaGTTCAGCAAAGGCTGTAAATTCTCTAGTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGDSRTLVSYRA*FSKGCKFSSAV Trigger: CACTGCACTAGAGAATTTACAGCCTTTGCTGAACAATGCTCTATAAGAGACAAGTGTCCTGGAGTCTCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| CDS-3UTR GCA 90 bp | GAAAAACAAGACTCTCATAGTCTAATGTGTTTGGGACGTATTAGCTTTATGGGTAAGAGAAGGCCGTTCTaGATCACTTTGCTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: EKQDSHSLMCLGRISFMGKRRPF*ITLLPM Trigger: CATTGGCAGCAAAGTGATGCAGAACGGCCTTCTCTT...ACCCATAAAGCTAATACGTCCCAAACACATTAGACTATGAGAGTCTTGTTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| 3UTR CAA 72 bp | TGCTACTTTGTAGACACCACGGTAGCTCTCAGCCCTTaGGATATCTTAAAAAGTAACTCTTTGTTACATATG | + |
|
Preference number: 4 (lower is better) Translates to: CYFVDTTVALSP*DILKSNSLLHM Trigger: CATATGTAACAAAGAGTTACTTTTTAAGATATCCAAAGGGCTGAGAGCTACCGTGGTGTCTACAAAGTAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| CDS TCA 90 bp | AGCAGCCCCTTCTGCCTGAGGATGCGGTACACCTCCGCAGAGGTCTaGGGTCCCTGCAGCTTCTGCCCGTTCAGCAGCTCCTTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPFCLRMRYTSAEV*GPCSFCPFSSSFSS Trigger: GCTGGAGAAGGAGCTGCTGAACGGGCAGAAGCTGCAGGGACCTCAGACCTCTGCGGAGGTGTACCGCATCCTCAGGCAGAAGGGGCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084853.4 ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| CDS-3UTR CAA 90 bp | CTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCATCCGCCCGCTGCGACGTATGACGGCCGCCTaGGTGTTGTCCCCACAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LPVISQVPWPHPLIRPLRRMTAA*VLSPQR Trigger: CCGCTGTGGGGACAACACCAAGGCGGCCGTCATACG...TCGCAGCGGGCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
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| CDS TCA 90 bp | GGCACCCTGCCCGTGATCTCATCGCAGATCTTGTGGATGAACTGGTaGGGGATGACGAACACCAGCAGGTCCGCGTCCTGCACGGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GTLPVISSQILWMNW*GMTNTSRSASCTAS Trigger: CGAAGCCGTGCAGGACGCGGACCTGCTGGTGTTCGTCATCCCTCACCAGTTCATCCACAAGATCTGCGATGAGATCACGGGCAGGGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS-3UTR CAA 90 bp | CTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCATCCGCCCGCTGCGAGTCTGCAGCAGCTCTTaGAAGAGAAGGCCGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPVISQVPWPHPLIRPLRVCSSS*KRRPFC Trigger: GCAGAACGGCCTTCTCTTCAAAGAGCTGCTGCAGAC...TCGCAGCGGGCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
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| CDS-3UTR CAA 90 bp | CCCCTCATCCGCCCGCTGCGACTGTCCAAGGACCAGCAGCCCAGGCAACGGGGATTTTCGTGGTCATTGTaGATTATGTCTGTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLIRPLRLSKDQQPRQRGFSWSL*IMSVSF Trigger: GAAGCTGACAGACATAATCAACAATGACCACGAAAA...TCCCCGTTGCCTGGGCTGCTGGTCCTTGGACAGTCGCAGCGGGCGGATGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
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| CDS-3UTR CAA 90 bp | CTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCATCCGCCCGCTGCGAACAGTGATTCTGAAGTaGGGCGTCTGCAGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPVISQVPWPHPLIRPLRTVILK*GVCSSS Trigger: AGAGCTGCTGCAGACGCCCAACTTCAGAATCACTGT...TCGCAGCGGGCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
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| CDS-3UTR CAA 90 bp | GCGTGTGTGTCTGTAGTTGTTACCCGACACATCTTAGCCAGTGGAGGAGTGCTTCGTATGACGGCCGCCTaGGTGTTGTCCCCACAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ACVSVVVTRHILASGGVLRMTAA*VLSPQR Trigger: CCGCTGTGGGGACAACACCAAGGCGGCCGTCATACG...AAGCACTCCTCCACTGGCTAAGATGTGTCGGGTAACAACTACAGACACACACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| CDS-3UTR CAA 90 bp | TCGCAGGTCCCATCCTGGAGGGATGGAGGAATGTCCCCATGTCCCCAGGTGACCACATTCTCTGGCAGCTaGTGTCCTGGGAGATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQVPSWRDGGMSPCPQVTTFSGS*CPGRYF Trigger: GAAATATCTCCCAGGACACAAGCTGCCAGAGAATGT...GGTCACCTGGGGACATGGGGACATTCCTCCATCCCTCCAGGATGGGACCTGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| CDS GCA 90 bp | CAGCATCTGCGTGACAGGCCTGCCTTCATAGCAGATCTGATACACTaGAGTGAAGAGGGGAAACTTGTCCAGCAGCCCCTTCTGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QHLRDRPAFIADLIH*SEEGKLVQQPLLPE Trigger: CTCAGGCAGAAGGGGCTGCTGGACAAGTTTCCCCTCTTCACTGCAGTGTATCAGATCTGCTATGAAGGCAGGCCTGTCACGCAGATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCATCCGCCCGCTGCGATCAAAGACCCACATCTaGACGGTGGAGGAGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPVISQVPWPHPLIRPLRSKTHI*TVEENF Trigger: GAAATTCTCCTCCACCGTCAAGATGTGGGTCTTTGA...TCGCAGCGGGCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS CCA 90 bp | GTCCTGCACGGCTTCGCTGAGGTTTGGGACAGCGACCACATTCTCTaGCAGCTTGTGTCCTGGGAGATATTTCACGTTTTCGTGGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: VLHGFAEVWDSDHIL*QLVSWEIFHVFVVI Trigger: AATGACCACGAAAACGTGAAATATCTCCCAGGACACAAGCTGCCAGAGAATGTGGTCGCTGTCCCAAACCTCAGCGAAGCCGTGCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
||
| CDS-3UTR CAA 90 bp | ACATCATTCCTACAAACAGCAGGTCAGAGAGGCCCAGGGACATCCTCGCAGGTCTCAAAGACCCACATCTaGACGGTGGAGGAGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSFLQTAGQRGPGTSSQVSKTHI*TVEENF Trigger: GAAATTCTCCTCCACCGTCAAGATGTGGGTCTTTGA...GACCTGCGAGGATGTCCCTGGGCCTCTCTGACCTGCTGTTTGTAGGAATGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGTTCCTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCATCCGCACATTCTCTGGCAGCTaGTGTCCTGGGAGATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KQFLPVISQVPWPHPLIRTFSGS*CPGRYF Trigger: GAAATATCTCCCAGGACACAAGCTGCCAGAGAATGT...GCGGATGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAGGAACTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
||
| CDS-3UTR CAA 90 bp | ATGCATAGAAGGCATGTGGAAACACTGGATTCCTGGAGGAACACCAGGTATCTGGTCTGCAGCAGCTCTTaGAAGAGAAGGCCGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MHRRHVETLDSWRNTRYLVCSSS*KRRPFC Trigger: GCAGAACGGCCTTCTCTTCAAAGAGCTGCTGCAGAC...CAGATACCTGGTGTTCCTCCAGGAATCCAGTGTTTCCACATGCCTTCTATGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
||
| CDS GCA 90 bp | ACGGTCTCCTCAAAGACCCACATCTTGACGGTGGAGGAGAATTTCTaGAGGGTCTTCACGTTGCTGCCGATGATTTTTGCAACAGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TVSSKTHILTVEENF*RVFTLLPMIFATAD Trigger: ATCAGCTGTTGCAAAAATCATCGGCAGCAACGTGAAGACCCTGCAGAAATTCTCCTCCACCGTCAAGATGTGGGTCTTTGAGGAGACCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
||
| CDS-3UTR CAA 90 bp | GAGGAGTGCTTCTCCTGGCACAGAGACAAAGCTGTAACAATTTGGATGTATTCGACAGTGATTCTGAAGTaGGGCGTCTGCAGCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: EECFSWHRDKAVTIWMYSTVILK*GVCSSS Trigger: AGAGCTGCTGCAGACGCCCAACTTCAGAATCACTGT...CGAATACATCCAAATTGTTACAGCTTTGTCTCTGTGCCAGGAGAAGCACTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| CDS TCA 90 bp | GCAGCTTGTGTCCTGGGAGATATTTCACGTTTTCGTGGTCATTGTTaGTTATGTCTGTCAGCTTCCTCCCGTTCACGGTCTCCTCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: AACVLGDISRFRGHC*LCLSASSRSRSPQR Trigger: TCTTTGAGGAGACCGTGAACGGGAGGAAGCTGACAGACATAATCAACAATGACCACGAAAACGTGAAATATCTCCCAGGACACAAGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CCA 90 bp | ACATTCTCTGGCAGCTTGTGTCCTGGGAGATATTTCACGTTTTCGTaGTCATTGTTGATTATGTCTGTCAGCTTCCTCCCGTTCACGGTC | + |
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Preference number: 5 (lower is better) Translates to: TFSGSLCPGRYFTFS*SLLIMSVSFLPFTV Trigger: GACCGTGAACGGGAGGAAGCTGACAGACATAATCAACAATGACCACGAAAACGTGAAATATCTCCCAGGACACAAGCTGCCAGAGAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CCA 90 bp | GCTGAGGTTTGGGACAGCGACCACATTCTCTGGCAGCTTGTGTCCTaGGAGATATTTCACGTTTTCGTGGTCATTGTTGATTATGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: AEVWDSDHILWQLVS*EIFHVFVVIVDYVC Trigger: ACAGACATAATCAACAATGACCACGAAAACGTGAAATATCTCCCAGGACACAAGCTGCCAGAGAATGTGGTCGCTGTCCCAAACCTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS-3UTR CAA 90 bp | AATCTAAACAGTTCCTTCCTGTCATATCCCAAGTACCCTGGCCTCATCCCCTCAACGTTTTCGTGGTCATaGTTGATTATGTCTGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: NLNSSFLSYPKYPGLIPSTFSWS*LIMSVS Trigger: GCTGACAGACATAATCAACAATGACCACGAAAACGT...TGAGGGGATGAGGCCAGGGTACTTGGGATATGACAGGAAGGAACTGTTTAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084853.4 |
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| CDS-3UTR CAA 90 bp | GTTCTAATTCTAGCATCCAAAGCACTCACTCCATATAGTGTGCGTTTCACTGAGTTTTCGTGGTCATTGTaGATTATGTCTGTCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: VLILASKALTPYSVRFTEFSWSL*IMSVSF Trigger: GAAGCTGACAGACATAATCAACAATGACCACGAAAA...CTCAGTGAAACGCACACTATATGGAGTGAGTGCTTTGGATGCTAGAATTAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146623.8 |
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| CDS TCA 72 bp | CGAACACCAGCAGGTCCGCGTCCTGCACGGCTTCGCTaGGGTTTGGGACAGCGACCACATTCTCTGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RTPAGPRPARLR*GLGQRPHSLAA Trigger: AGCTGCCAGAGAATGTGGTCGCTGTCCCAAACCTCAGCGAAGCCGTGCAGGACGCGGACCTGCTGGTGTTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CCA 72 bp | CAGCAGGTCCGCGTCCTGCACGGCTTCGCTGAGGTTTaGGACAGCGACCACATTCTCTGGCAGCTTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: QQVRVLHGFAEV*DSDHILWQLVS Trigger: GGACACAAGCTGCCAGAGAATGTGGTCGCTGTCCCAAACCTCAGCGAAGCCGTGCAGGACGCGGACCTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CAA 72 bp | ATCATTTCCATGAGGCCCAGGCGTATGACGGCCGCCTaGGTGTTGTCCCCACAGCGGAGGCCGTCGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: IISMRPRRMTAA*VLSPQRRPSQK Trigger: CTTCTGCGACGGCCTCCGCTGTGGGGACAACACCAAGGCGGCCGTCATACGCCTGGGCCTCATGGAAATGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CAA 72 bp | AAGGTGGCCGTGGACACCTGGCCCTTACAGAAGATCTaGGCGAAAGCGATCATTTCCATGAGGCCCAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: KVAVDTWPLQKI*AKAIISMRPRR Trigger: ACGCCTGGGCCTCATGGAAATGATCGCTTTCGCCAAGATCTTCTGTAAGGGCCAGGTGTCCACGGCCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CAA 90 bp | TCTGTCAGCTTCCTCCCGTTCACGGTCTCCTCAAAGACCCACATCTaGACGGTGGAGGAGAATTTCTGCAGGGTCTTCACGTTGCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: SVSFLPFTVSSKTHI*TVEENFCRVFTLLP Trigger: CGGCAGCAACGTGAAGACCCTGCAGAAATTCTCCTCCACCGTCAAGATGTGGGTCTTTGAGGAGACCGTGAACGGGAGGAAGCTGACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS GCA 72 bp | GGCGTCTGCAGCAGCTCTTTGAAGAGAAGGCCGTTCTaGATCACTTTGCTGCCAATGGTGGTCTCGCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: GVCSSSLKRRPF*ITLLPMVVSQN Trigger: GTTCTGCGAGACCACCATTGGCAGCAAAGTGATGCAGAACGGCCTTCTCTTCAAAGAGCTGCTGCAGACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS GCA 72 bp | CGTGACAGGCCTGCCTTCATAGCAGATCTGATACACTaGAGTGAAGAGGGGAAACTTGTCCAGCAGCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: RDRPAFIADLIH*SEEGKLVQQPL Trigger: AAGGGGCTGCTGGACAAGTTTCCCCTCTTCACTGCAGTGTATCAGATCTGCTATGAAGGCAGGCCTGTCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129305.2 ENSMUST00000146623.8 |
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| CDS CAA 72 bp | TTCCTCCCGTTCACGGTCTCCTCAAAGACCCACATCTaGACGGTGGAGGAGAATTTCTGCAGGGTCTTCACG | + |
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Preference number: 6 (lower is better) Translates to: FLPFTVSSKTHI*TVEENFCRVFT Trigger: CGTGAAGACCCTGCAGAAATTCTCCTCCACCGTCAAGATGTGGGTCTTTGAGGAGACCGTGAACGGGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CAA 72 bp | ACGGTGTCTGCATCGTCTACCACAGTGATTCTGAAGTaGGGCGTCTGCAGCAGCTCTTTGAAGAGAAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: TVSASSTTVILK*GVCSSSLKRRP Trigger: CGGCCTTCTCTTCAAAGAGCTGCTGCAGACGCCCAACTTCAGAATCACTGTGGTAGACGATGCAGACACCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CCA 72 bp | GGCTTCGCTGAGGTTTGGGACAGCGACCACATTCTCTaGCAGCTTGTGTCCTGGGAGATATTTCACGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: GFAEVWDSDHIL*QLVSWEIFHVF Trigger: GAAAACGTGAAATATCTCCCAGGACACAAGCTGCCAGAGAATGTGGTCGCTGTCCCAAACCTCAGCGAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CAA 90 bp | TCGTCTACCACAGTGATTCTGAAGTTGGGCGTCTGCAGCAGCTCTTaGAAGAGAAGGCCGTTCTGCATCACTTTGCTGCCAATGGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSTTVILKLGVCSSS*KRRPFCITLLPMVV Trigger: GACCACCATTGGCAGCAAAGTGATGCAGAACGGCCTTCTCTTCAAAGAGCTGCTGCAGACGCCCAACTTCAGAATCACTGTGGTAGACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CAA 72 bp | TTGACGGTGGAGGAGAATTTCTGCAGGGTCTTCACGTaGCTGCCGATGATTTTTGCAACAGCTGATCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LTVEENFCRVFT*LPMIFATADPQ Trigger: CTGGGGATCAGCTGTTGCAAAAATCATCGGCAGCAACGTGAAGACCCTGCAGAAATTCTCCTCCACCGTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CAA 72 bp | CTGAGGTTTGGGACAGCGACCACATTCTCTGGCAGCTaGTGTCCTGGGAGATATTTCACGTTTTCGTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LRFGTATTFSGS*CPGRYFTFSWS Trigger: TGACCACGAAAACGTGAAATATCTCCCAGGACACAAGCTGCCAGAGAATGTGGTCGCTGTCCCAAACCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS GCA 72 bp | AATGTTCTTAAGAGCACCGCAAAGCTCCACGGTGTCTaGATCGTCTACCACAGTGATTCTGAAGTTGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: NVLKSTAKLHGV*IVYHSDSEVGR Trigger: ACGCCCAACTTCAGAATCACTGTGGTAGACGATGCAGACACCGTGGAGCTTTGCGGTGCTCTTAAGAACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CAA 90 bp | GGCAGCTTGTGTCCTGGGAGATATTTCACGTTTTCGTGGTCATTGTaGATTATGTCTGTCAGCTTCCTCCCGTTCACGGTCTCCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: GSLCPGRYFTFSWSL*IMSVSFLPFTVSSK Trigger: CTTTGAGGAGACCGTGAACGGGAGGAAGCTGACAGACATAATCAACAATGACCACGAAAACGTGAAATATCTCCCAGGACACAAGCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CAA 90 bp | TCTGGCAGCTTGTGTCCTGGGAGATATTTCACGTTTTCGTGGTCATaGTTGATTATGTCTGTCAGCTTCCTCCCGTTCACGGTCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SGSLCPGRYFTFSWS*LIMSVSFLPFTVSS Trigger: TGAGGAGACCGTGAACGGGAGGAAGCTGACAGACATAATCAACAATGACCACGAAAACGTGAAATATCTCCCAGGACACAAGCTGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS GCA 72 bp | TCAAAGACCCACATCTTGACGGTGGAGGAGAATTTCTaGAGGGTCTTCACGTTGCTGCCGATGATTTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: SKTHILTVEENF*RVFTLLPMIFA Trigger: TGCAAAAATCATCGGCAGCAACGTGAAGACCCTGCAGAAATTCTCCTCCACCGTCAAGATGTGGGTCTTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CCA 72 bp | GGCAGCTTGTGTCCTGGGAGATATTTCACGTTTTCGTaGTCATTGTTGATTATGTCTGTCAGCTTCCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: GSLCPGRYFTFS*SLLIMSVSFLP Trigger: CGGGAGGAAGCTGACAGACATAATCAACAATGACCACGAAAACGTGAAATATCTCCCAGGACACAAGCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CCA 72 bp | TGGGACAGCGACCACATTCTCTGGCAGCTTGTGTCCTaGGAGATATTTCACGTTTTCGTGGTCATTGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: WDSDHILWQLVS*EIFHVFVVIVD Trigger: ATCAACAATGACCACGAAAACGTGAAATATCTCCCAGGACACAAGCTGCCAGAGAATGTGGTCGCTGTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS TCA 72 bp | GTCCTGGGAGATATTTCACGTTTTCGTGGTCATTGTTaGTTATGTCTGTCAGCTTCCTCCCGTTCACGGTCT | + |
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Preference number: 6 (lower is better) Translates to: VLGDISRFRGHC*LCLSASSRSRS Trigger: AGACCGTGAACGGGAGGAAGCTGACAGACATAATCAACAATGACCACGAAAACGTGAAATATCTCCCAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CAA 72 bp | TGTCCTGGGAGATATTTCACGTTTTCGTGGTCATTGTaGATTATGTCTGTCAGCTTCCTCCCGTTCACGGTC | + |
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Preference number: 6 (lower is better) Translates to: CPGRYFTFSWSL*IMSVSFLPFTV Trigger: GACCGTGAACGGGAGGAAGCTGACAGACATAATCAACAATGACCACGAAAACGTGAAATATCTCCCAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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| CDS CAA 72 bp | TTGTGTCCTGGGAGATATTTCACGTTTTCGTGGTCATaGTTGATTATGTCTGTCAGCTTCCTCCCGTTCACG | + |
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Preference number: 6 (lower is better) Translates to: LCPGRYFTFSWS*LIMSVSFLPFT Trigger: CGTGAACGGGAGGAAGCTGACAGACATAATCAACAATGACCACGAAAACGTGAAATATCTCCCAGGACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084853.4 ENSMUST00000146623.8 |
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