Pregenerated sensors for GPD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023019Ensembl transcript IDs: ENSMUST00000023760.13, ENSMUST00000162194.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGCTGGGTGCAGGCAAGGGAAAGCTGGGAAAGGTCACACAGGGTaGGGAGGCCCTGACAAAGCTCCAGGAACCAGGAAGTCTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: AAGCRQGKAGKGHTG*GGPDKAPGTRKSLG Trigger: TCCCAGAGACTTCCTGGTTCCTGGAGCTTTGTCAGGGCCTCCCCACCCTGTGTGACCTTTCCCAGCTTTCCCTTGCCTGCACCCAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 90 bp | CGCAGCCTCCTGTCCTCAGGGTCCTTCAGAGAGGACTCTGCTAGATaGGGAGTCCTGGAGACAGTCCTGATGACGGGTGTCACGTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: RSLLSSGSFREDSAR*GVLETVLMTGVTCF Trigger: GAAGCACGTGACACCCGTCATCAGGACTGTCTCCAGGACTCCCCATCTAGCAGAGTCCTCTCTGAAGGACCCTGAGGACAGGAGGCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR TCA 90 bp | CAGGCAAGGGAAAGCTGGGAAAGGTCACACAGGGTGGGGAGGCCCTaGCAAAGCTCCAGGAACCAGGAAGTCTCTGGGAAGAATGGAGCG | + |
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Preference number: 1 (lower is better) Translates to: QARESWERSHRVGRP*QSSRNQEVSGKNGA Trigger: CGCTCCATTCTTCCCAGAGACTTCCTGGTTCCTGGAGCTTTGTCAGGGCCTCCCCACCCTGTGTGACCTTTCCCAGCTTTCCCTTGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 90 bp | GAGGCCCTGACAAAGCTCCAGGAACCAGGAAGTCTCTGGGAAGAATaGAGCGCCCCAGGGCCAGAGATGCCTGTGGAGAGCAACTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: EALTKLQEPGSLWEE*SAPGPEMPVESNSC Trigger: ACAAGAGTTGCTCTCCACAGGCATCTCTGGCCCTGGGGCGCTCCATTCTTCCCAGAGACTTCCTGGTTCCTGGAGCTTTGTCAGGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 90 bp | TGTCAGCAGATTAGATTCCTGCTCCCCAAAGAGGGTGCTGGCAGCTaGGTGCAGGCAAGGGAAAGCTGGGAAAGGTCACACAGGGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: CQQIRFLLPKEGAGS*VQARESWERSHRVG Trigger: CCCCACCCTGTGTGACCTTTCCCAGCTTTCCCTTGCCTGCACCCAGCTGCCAGCACCCTCTTTGGGGAGCAGGAATCTAATCTGCTGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 90 bp | GGCATCCAGACCCTTCCCTTGGCAGCCTTTGCCCCATCTTTCCTGTaGCTGAAGTGCTTCTTCAGTCACTTAATGGGACTTGGGACCGGT | + |
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Preference number: 1 (lower is better) Translates to: GIQTLPLAAFAPSFL*LKCFFSHLMGLGTG Trigger: ACCGGTCCCAAGTCCCATTAAGTGACTGAAGAAGCACTTCAGCCACAGGAAAGATGGGGCAAAGGCTGCCAAGGGAAGGGTCTGGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR GCA 90 bp | ACCCTTCCCTTGGCAGCCTTTGCCCCATCTTTCCTGTGGCTGAAGTaGTTCTTCAGTCACTTAATGGGACTTGGGACCGGTTCCCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: TLPLAAFAPSFLWLK*FFSHLMGLGTGSQC Trigger: ACACTGGGAACCGGTCCCAAGTCCCATTAAGTGACTGAAGAAGCACTTCAGCCACAGGAAAGATGGGGCAAAGGCTGCCAAGGGAAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR CCA 90 bp | ATCTTTCCTGTGGCTGAAGTGCTTCTTCAGTCACTTAATGGGACTTaGGACCGGTTCCCAGTGTGTGTGAGGCAGCAACCGGCAGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: IFPVAEVLLQSLNGT*DRFPVCVRQQPAAL Trigger: AAGGGCTGCCGGTTGCTGCCTCACACACACTGGGAACCGGTCCCAAGTCCCATTAAGTGACTGAAGAAGCACTTCAGCCACAGGAAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR GCA 90 bp | GGTCTGTGTCAGCTCAGGCATCCAGACCCTTCCCTTGGCAGCCTTTaGCCCATCTTTCCTGTGGCTGAAGTGCTTCTTCAGTCACTTAAT | + |
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Preference number: 1 (lower is better) Translates to: GLCQLRHPDPSLGSL*PIFPVAEVLLQSLN Trigger: ATTAAGTGACTGAAGAAGCACTTCAGCCACAGGAAAGATGGGGCAAAGGCTGCCAAGGGAAGGGTCTGGATGCCTGAGCTGACACAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR GCA 90 bp | GTTAGTTTAATATCAAGCTGGCCAGAGCCACGGTGTCCCAGTTGCTaGCACACAGGAAATGGAGACCCCTGGTGGAGAGAGAAACCTCCA | + |
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Preference number: 1 (lower is better) Translates to: VSLISSWPEPRCPSC*HTGNGDPWWREKPP Trigger: TGGAGGTTTCTCTCTCCACCAGGGGTCTCCATTTCCTGTGTGGCAGCAACTGGGACACCGTGGCTCTGGCCAGCTTGATATTAAACTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 90 bp | TGCTCCTTAGTTCTAAGCCTACAGATGCCGGGTGGCCTTCCAGGCTaGGTGAGAACGACTTGGGCAAAAGGAAAGGGCAGAGTCAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: CSLVLSLQMPGGLPG*VRTTWAKGKGRVKN Trigger: ATTCTTGACTCTGCCCTTTCCTTTTGCCCAAGTCGTTCTCACCCAGCCTGGAAGGCCACCCGGCATCTGTAGGCTTAGAACTAAGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR TCA 90 bp | GGAGAGAGAAACCTCCAGCTATTTATAGCTAGCGCTCCAGGCTGCTaGTCTGTGACATTCTCTTGCTGCCACCCAACTTTGGAACAGGGC | + |
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Preference number: 1 (lower is better) Translates to: GERNLQLFIASAPGC*SVTFSCCHPTLEQG Trigger: GCCCTGTTCCAAAGTTGGGTGGCAGCAAGAGAATGTCACAGATCAGCAGCCTGGAGCGCTAGCTATAAATAGCTGGAGGTTTCTCTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR GCA 90 bp | TGTGTTAGTTTAATATCAAGCTGGCCAGAGCCACGGTGTCCCAGTTaGTGCCACACAGGAAATGGAGACCCCTGGTGGAGAGAGAAACCT | + |
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Preference number: 1 (lower is better) Translates to: CVSLISSWPEPRCPS*CHTGNGDPWWREKP Trigger: AGGTTTCTCTCTCCACCAGGGGTCTCCATTTCCTGTGTGGCAGCAACTGGGACACCGTGGCTCTGGCCAGCTTGATATTAAACTAACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 90 bp | GAGCTTTGTATTTTGTTAGCAAACAGTGAGATCGTTGATGTTGTGTaGGGCCTGGCAGAGGTCGGCCAAAGGGTCTCTGGGGTCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: ELCILLANSEIVDVV*GLAEVGQRVSGVCV Trigger: GACACAGACCCCAGAGACCCTTTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAACAAAATACAAAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR CCA 90 bp | TGTTCCGAGGACAGCTGGCCTTGGACTAGGACCCACCAACCCTTGTaGAAACCTACTGAACCTTTGAGCTGCTCCTTAGTTCTAAGCCTA | + |
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Preference number: 1 (lower is better) Translates to: CSEDSWPWTRTHQPL*KPTEPLSCSLVLSL Trigger: TAGGCTTAGAACTAAGGAGCAGCTCAAAGGTTCAGTAGGTTTCCACAAGGGTTGGTGGGTCCTAGTCCAAGGCCAGCTGTCCTCGGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CAA 90 bp | AGTTCCCCAGCTCCTGAGGTGTGTGGGTCCGATCTCGCGAGGACCTaGTTCTGTTCCGAGGACAGCTGGCCTTGGACTAGGACCCACCAA | + |
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Preference number: 2 (lower is better) Translates to: SSPAPEVCGSDLART*FCSEDSWPWTRTHQ Trigger: TTGGTGGGTCCTAGTCCAAGGCCAGCTGTCCTCGGAACAGAACAAGGTCCTCGCGAGATCGGACCCACACACCTCAGGAGCTGGGGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTGGCCTTGGACTAGGACCCACCAACCCTTGTGGAAACCTACTGAACCTTGGTTCCCAGTGTGTGTaGGGCAGCAACCGGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: TAGLGLGPTNPCGNLLNLGSQCV*GSNRQP Trigger: GGGCTGCCGGTTGCTGCCTCACACACACTGGGAACC...AAGGTTCAGTAGGTTTCCACAAGGGTTGGTGGGTCCTAGTCCAAGGCCAGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGTGTGTGGGTCCGATCTCGCGAGGACCTTGTTCTGTTCCGAGGACAGCTATCGTTGATGTTGTGTaGGGCCTGGCAGAGGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: LRCVGPISRGPCSVPRTAIVDVV*GLAEVG Trigger: GCCGACCTCTGCCAGGCCCCACACAACATCAACGAT...AGCTGTCCTCGGAACAGAACAAGGTCCTCGCGAGATCGGACCCACACACCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR-3UTR CCA 90 bp | GTGTGGGTCCGATCTCGCGAGGACCTTGTTCTGTTCCGAGGACAGCTGGCCTTGGAACCAGGAAGTCTCTaGGAAGAATGGAGCGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: VWVRSREDLVLFRGQLALEPGSL*EEWSAP Trigger: TGGGGCGCTCCATTCTTCCCAGAGACTTCCTGGTTC...CAAGGCCAGCTGTCCTCGGAACAGAACAAGGTCCTCGCGAGATCGGACCCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCCCTCGAGTTCCCCAGCTCCTGAGGTGTGTGGGTCCGATCTCGCGAGGATGGGTGAGAACGACTTaGGCAAAAGGAAAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: SFPRVPQLLRCVGPISRGWVRTT*AKGKGR Trigger: TCTGCCCTTTCCTTTTGCCCAAGTCGTTCTCACCCA...TCCTCGCGAGATCGGACCCACACACCTCAGGAGCTGGGGAACTCGAGGGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CAA 90 bp | AAGCCTACAGATGCCGGGTGGCCTTCCAGGCTGGGTGAGAACGACTaGGGCAAAAGGAAAGGGCAGAGTCAAGAATATGGGCTGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: KPTDAGWPSRLGEND*GKRKGQSQEYGLTA Trigger: GGCTGTCAGCCCATATTCTTGACTCTGCCCTTTCCTTTTGCCCAAGTCGTTCTCACCCAGCCTGGAAGGCCACCCGGCATCTGTAGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR-3UTR CCA 90 bp | GCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAAAGGGACAGCAAGGAAGTGTaGATTCTGTGGCGAGCATCT | + |
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Preference number: 2 (lower is better) Translates to: ANSEIVDVVWGLAEVGQRDSKEV*ILWRAS Trigger: AGATGCTCGCCACAGAATCCACACTTCCTTGCTGTC...CCTTTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR CAA 90 bp | TTCTGTTCCGAGGACAGCTGGCCTTGGACTAGGACCCACCAACCCTaGTGGAAACCTACTGAACCTTTGAGCTGCTCCTTAGTTCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: FCSEDSWPWTRTHQP*WKPTEPLSCSLVLS Trigger: GCTTAGAACTAAGGAGCAGCTCAAAGGTTCAGTAGGTTTCCACAAGGGTTGGTGGGTCCTAGTCCAAGGCCAGCTGTCCTCGGAACAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CAA 90 bp | CTGAGGACGATAAACTATAAATCCTACATTCTGTTAGACGTGAAGTaGGTGGTGACTGCAGAGAGAAGCGGCCTTGTGGGGAGGACCCTG | + |
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Preference number: 2 (lower is better) Translates to: LRTINYKSYILLDVK*VVTAERSGLVGRTL Trigger: CAGGGTCCTCCCCACAAGGCCGCTTCTCTCTGCAGTCACCACCAACTTCACGTCTAACAGAATGTAGGATTTATAGTTTATCGTCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR-3UTR CCA 90 bp | AAACCTACTGAACCTTTGAGCTGCTCCTTAGTTCTAAGCCTACAGATGCCGGGTGACAGCAAGGAAGTGTaGATTCTGTGGCGAGCATCT | + |
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Preference number: 2 (lower is better) Translates to: KPTEPLSCSLVLSLQMPGDSKEV*ILWRAS Trigger: AGATGCTCGCCACAGAATCCACACTTCCTTGCTGTC...ACCCGGCATCTGTAGGCTTAGAACTAAGGAGCAGCTCAAAGGTTCAGTAGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR-3UTR CAA 90 bp | GGGTCTGTGTCAGCTCAGGCATCCAGACCCTTCCCTTGGCAGCCTTTGCCCCATCCGGCAGCCCTTGACTaGGCGCCTTCCCTTCCCCCA | + |
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Preference number: 3 (lower is better) Translates to: GSVSAQASRPFPWQPLPHPAALD*APSLPP Trigger: TGGGGGAAGGGAAGGCGCCAAGTCAAGGGCTGCCGG...ATGGGGCAAAGGCTGCCAAGGGAAGGGTCTGGATGCCTGAGCTGACACAGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR TCA 72 bp | CATCCCGCCCCAGTCTCCCGGGGAACAGCTCTGAATTaGGTCATGCGTGGGAGGGTTCCAGCCCAGTCGGGA | + |
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Preference number: 3 (lower is better) Translates to: HPAPVSRGTALN*VMRGRVPAQSG Trigger: TCCCGACTGGGCTGGAACCCTCCCACGCATGACTCAATTCAGAGCTGTTCCCCGGGAGACTGGGGCGGGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGTCAGCTCAGGCATCCAGACCCTTCCCTTGGCAGCCTTTGCCCCATCTTCCGGCAGCCCTTGACTaGGCGCCTTCCCTTCCCCCA | + |
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Preference number: 3 (lower is better) Translates to: SVSAQASRPFPWQPLPHLPAALD*APSLPP Trigger: TGGGGGAAGGGAAGGCGCCAAGTCAAGGGCTGCCGG...AAGATGGGGCAAAGGCTGCCAAGGGAAGGGTCTGGATGCCTGAGCTGACACAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR GCA 72 bp | CCCAGGGCCAGAGATGCCTGTGGAGAGCAACTCTTGTaGCAGAGTAGCCTGGGGGAGGGGGAAGTAGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: PRARDACGEQLL*QSSLGEGEVEA Trigger: AGCCTCTACTTCCCCCTCCCCCAGGCTACTCTGGCACAAGAGTTGCTCTCCACAGGCATCTCTGGCCCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR-3UTR CAA 90 bp | GCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAAAGGTTCCGCTTGTCTCCGTaGGGGCAAAGGGGCTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: ANSEIVDVVWGLAEVGQRFRLSP*GQRGCL Trigger: CAGGCAGCCCCTTTGCCCCAACGGAGACAAGCGGAA...CCTTTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR TCA 72 bp | CACTTAATGGGACTTGGGACCGGTTCCCAGTGTGTGTaGGGCAGCAACCGGCAGCCCTTGACTTGGCGCCTT | + |
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Preference number: 3 (lower is better) Translates to: HLMGLGTGSQCV*GSNRQPLTWRL Trigger: AAGGCGCCAAGTCAAGGGCTGCCGGTTGCTGCCTCACACACACTGGGAACCGGTCCCAAGTCCCATTAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAACTTTGGAACAGGGCCAGTGCAAAGCAGTCTCCCATCCCCCTCTGATCTCTGTGGAGAGCAACTCTaGTGCCAGAGTAGCCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: PNFGTGPVQSSLPSPSDLCGEQL*CQSSLG Trigger: CCCCAGGCTACTCTGGCACAAGAGTTGCTCTCCACA...GAGATCAGAGGGGGATGGGAGACTGCTTTGCACTGGCCCTGTTCCAAAGTTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 72 bp | CTGTCCTCAGGGTCCTTCAGAGAGGACTCTGCTAGATaGGGAGTCCTGGAGACAGTCCTGATGACGGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: LSSGSFREDSAR*GVLETVLMTGV Trigger: GACACCCGTCATCAGGACTGTCTCCAGGACTCCCCATCTAGCAGAGTCCTCTCTGAAGGACCCTGAGGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR CCA 72 bp | ATGCCGGGTGGCCTTCCAGGCTGGGTGAGAACGACTTaGGCAAAAGGAAAGGGCAGAGTCAAGAATATGGGC | + |
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Preference number: 3 (lower is better) Translates to: MPGGLPGWVRTT*AKGKGRVKNMG Trigger: GCCCATATTCTTGACTCTGCCCTTTCCTTTTGCCCAAGTCGTTCTCACCCAGCCTGGAAGGCCACCCGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 72 bp | GTTCTAAGCCTACAGATGCCGGGTGGCCTTCCAGGCTaGGTGAGAACGACTTGGGCAAAAGGAAAGGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: VLSLQMPGGLPG*VRTTWAKGKGR Trigger: TCTGCCCTTTCCTTTTGCCCAAGTCGTTCTCACCCAGCCTGGAAGGCCACCCGGCATCTGTAGGCTTAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 72 bp | GAGCTGCTCCTTAGTTCTAAGCCTACAGATGCCGGGTaGCCTTCCAGGCTGGGTGAGAACGACTTGGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: ELLLSSKPTDAG*PSRLGENDLGK Trigger: TTTGCCCAAGTCGTTCTCACCCAGCCTGGAAGGCCACCCGGCATCTGTAGGCTTAGAACTAAGGAGCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 72 bp | GCGAGGACCTTGTTCTGTTCCGAGGACAGCTGGCCTTaGACTAGGACCCACCAACCCTTGTGGAAACCTACT | + |
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Preference number: 3 (lower is better) Translates to: ARTLFCSEDSWP*TRTHQPLWKPT Trigger: AGTAGGTTTCCACAAGGGTTGGTGGGTCCTAGTCCAAGGCCAGCTGTCCTCGGAACAGAACAAGGTCCTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 72 bp | GATCTCGCGAGGACCTTGTTCTGTTCCGAGGACAGCTaGCCTTGGACTAGGACCCACCAACCCTTGTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: DLARTLFCSEDS*PWTRTHQPLWK Trigger: TTTCCACAAGGGTTGGTGGGTCCTAGTCCAAGGCCAGCTGTCCTCGGAACAGAACAAGGTCCTCGCGAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 72 bp | AGAGCCACGGTGTCCCAGTTGCTGCCACACAGGAAATaGAGACCCCTGGTGGAGAGAGAAACCTCCAGCTAT | + |
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Preference number: 3 (lower is better) Translates to: RATVSQLLPHRK*RPLVERETSSY Trigger: ATAGCTGGAGGTTTCTCTCTCCACCAGGGGTCTCCATTTCCTGTGTGGCAGCAACTGGGACACCGTGGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR-3UTR CAA 90 bp | TGCCACACAGGAAATGGAGACCCCTGGTGGAGAGAGAAACCTCCAGCTATTTATTTCCGCTTGTCTCCGTaGGGGCAAAGGGGCTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: CHTGNGDPWWREKPPAIYFRLSP*GQRGCL Trigger: CAGGCAGCCCCTTTGCCCCAACGGAGACAAGCGGAA...ATAAATAGCTGGAGGTTTCTCTCTCCACCAGGGGTCTCCATTTCCTGTGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR TCA 72 bp | GTTTTCAATTGTCCTTCCCTCGAGTTCCCCAGCTCCTaGGGTGTGTGGGTCCGATCTCGCGAGGACCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: VFNCPSLEFPSS*GVWVRSREDLV Trigger: AACAAGGTCCTCGCGAGATCGGACCCACACACCTCAGGAGCTGGGGAACTCGAGGGAAGGACAATTGAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR GCA 72 bp | TTAATATCAAGCTGGCCAGAGCCACGGTGTCCCAGTTaGTGCCACACAGGAAATGGAGACCCCTGGTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: LISSWPEPRCPS*CHTGNGDPWWR Trigger: TCTCCACCAGGGGTCTCCATTTCCTGTGTGGCAGCAACTGGGACACCGTGGCTCTGGCCAGCTTGATATTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 72 bp | GTGGCTGAAGTGCTTCTTCAGTCACTTAATGGGACTTaGGACCGGTTCCCAGTGTGTGTGAGGCAGCAACCG | + |
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Preference number: 3 (lower is better) Translates to: VAEVLLQSLNGT*DRFPVCVRQQP Trigger: CGGTTGCTGCCTCACACACACTGGGAACCGGTCCCAAGTCCCATTAAGTGACTGAAGAAGCACTTCAGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR GCA 72 bp | ATCCTACATTCTGTTAGACGTGAAGTTGGTGGTGACTaGAGAGAGAAGCGGCCTTGTGGGGAGGACCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: ILHSVRREVGGD*REKRPCGEDPE Trigger: CTCAGGGTCCTCCCCACAAGGCCGCTTCTCTCTGCAGTCACCACCAACTTCACGTCTAACAGAATGTAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR GCA 72 bp | TTGGCAGCCTTTGCCCCATCTTTCCTGTGGCTGAAGTaGTTCTTCAGTCACTTAATGGGACTTGGGACCGGT | + |
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Preference number: 3 (lower is better) Translates to: LAAFAPSFLWLK*FFSHLMGLGTG Trigger: ACCGGTCCCAAGTCCCATTAAGTGACTGAAGAAGCACTTCAGCCACAGGAAAGATGGGGCAAAGGCTGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| 3UTR GCA 72 bp | CACCAACCCTTGTGGAAACCTACTGAACCTTTGAGCTaGTCCTTAGTTCTAAGCCTACAGATGCCGGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: HQPLWKPTEPLS*SLVLSLQMPGG Trigger: GCCACCCGGCATCTGTAGGCTTAGAACTAAGGAGCAGCTCAAAGGTTCAGTAGGTTTCCACAAGGGTTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR CCA 72 bp | GACAGCTGGCCTTGGACTAGGACCCACCAACCCTTGTaGAAACCTACTGAACCTTTGAGCTGCTCCTTAGTT | + |
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Preference number: 3 (lower is better) Translates to: DSWPWTRTHQPL*KPTEPLSCSLV Trigger: AACTAAGGAGCAGCTCAAAGGTTCAGTAGGTTTCCACAAGGGTTGGTGGGTCCTAGTCCAAGGCCAGCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| 3UTR-3UTR CAA 90 bp | CAGGAACCAGGAAGTCTCTGGGAAGAATGGAGCGCCCCAGGGCCAGAGATGCCTGAAGTTAGAGTGGGGTaGTTTGAGAGCTTTGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: QEPGSLWEEWSAPGPEMPEVRVG*FESFVF Trigger: AAATACAAAGCTCTCAAACAACCCCACTCTAACTTC...AGGCATCTCTGGCCCTGGGGCGCTCCATTCTTCCCAGAGACTTCCTGGTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| 3UTR CCA 72 bp | ACCCTTCCCTTGGCAGCCTTTGCCCCATCTTTCCTGTaGCTGAAGTGCTTCTTCAGTCACTTAATGGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: TLPLAAFAPSFL*LKCFFSHLMGL Trigger: AAGTCCCATTAAGTGACTGAAGAAGCACTTCAGCCACAGGAAAGATGGGGCAAAGGCTGCCAAGGGAAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | TGGGACCGGTTCCCAGTGTGTGTGAGGCAGCAACCGGCAGCCCTTGACTTGGCGTGGCCGAGGACACAGTaGCACTGCAGAAGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WDRFPVCVRQQPAALDLAWPRTQ*HCRRAW Trigger: CCAAGCTCTTCTGCAGTGGCACTGTGTCCTCGGCCA...CGCCAAGTCAAGGGCTGCCGGTTGCTGCCTCACACACACTGGGAACCGGTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCCTGTCCTCAGGGTCCTTCAGAGAGGACTCTGCTAGATGGGGAGTCCTGGGGTCGTGATGAGGTCTaGGACCCCGCAGCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASCPQGPSERTLLDGESWGRDEV*DPAALQ Trigger: CTGGAGAGCTGCGGGGTCGCAGACCTCATCACGACC...CCAGGACTCCCCATCTAGCAGAGTCCTCTCTGAAGGACCCTGAGGACAGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGGGTCTGTGTCAGCTCAGGCATCCAGACCCTTCCCTTGGCAGCCTTTGTTCAGGAGCTGTCCCTaGGCCGGGTCCTTGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLGSVSAQASRPFPWQPLFRSCP*AGSLQP Trigger: CGGCTGCAAGGACCCGGCCCAGGGACAGCTCCTGAA...CAAAGGCTGCCAAGGGAAGGGTCTGGATGCCTGAGCTGACACAGACCCCAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTGTGTGTGAGGCAGCAACCGGCAGCCCTTGACTTGGCGCCTTCCCTTCCCCCTTCAAGTGGCCCTTaGGCTGGTCACAGATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PVCVRQQPAALDLAPSLPPSSGP*AGHRSC Trigger: GCAAGATCTGTGACCAGCTCAAGGGCCACTTGAAGG...GGGAAGGGAAGGCGCCAAGTCAAGGGCTGCCGGTTGCTGCCTCACACACACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCCAGAGATGCCTGTGGAGAGCAACTCTTGTGCCAGAGTAGCCTGGGGGAGTCTGCAGACAGCGGATaGATTCGCCCACTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RARDACGEQLLCQSSLGESADSG*IRPLAG Trigger: GCCAGCCAGTGGGCGAATTCATCCGCTGTCTGCAGA...CTCCCCCAGGCTACTCTGGCACAAGAGTTGCTCTCCACAGGCATCTCTGGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR GCA 90 bp | CCCAGGGCCAGAGATGCCTGTGGAGAGCAACTCTTGTGCCAGAGTAGCCTGGGGGTGTGCCAGCCGGCCTaGATTGCTACCCACGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRARDACGEQLLCQSSLGVCQPA*IATHDL Trigger: AAGATCGTGGGTAGCAATGCAGGCCGGCTGGCACAC...CCCCAGGCTACTCTGGCACAAGAGTTGCTCTCCACAGGCATCTCTGGCCCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGTCCGATCTCGCGAGGACCTTGTTCTGTTCCGAGGACAGCTGGCCTTGAGCCTGGACCACGTCTaGGATGGCCACCACATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VWVRSREDLVLFRGQLALSLDHV*DGHHIG Trigger: CCCAATGTGGTGGCCATCCCAGACGTGGTCCAGGCT...CAAGGCCAGCTGTCCTCGGAACAGAACAAGGTCCTCGCGAGATCGGACCCACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGGGTCCTTCAGAGAGGACTCTGCTAGATGGGGAGTCCTGGAGACAGTCTTCAGGAGCTGTCCCTaGGCCGGGTCCTTGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSGSFREDSARWGVLETVFRSCP*AGSLQP Trigger: CGGCTGCAAGGACCCGGCCCAGGGACAGCTCCTGAA...GACTGTCTCCAGGACTCCCCATCTAGCAGAGTCCTCTCTGAAGGACCCTGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCTGTGTCAGCTCAGGCATCCAGACCCTTCCCTTGGCAGCCTTTGCCCCATAGCTCTCCAGGAAGGTaGCCGAGGACACAGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSVSAQASRPFPWQPLPHSSPGR*PRTQCH Trigger: GTGGCACTGTGTCCTCGGCCACCTTCCTGGAGAGCT...ATGGGGCAAAGGCTGCCAAGGGAAGGGTCTGGATGCCTGAGCTGACACAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | GCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAAAGGAGCTCCCGGGCTGTCTaGGGCCCCTGTAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ANSEIVDVVWGLAEVGQRSSRAV*GPCSFC Trigger: GCAGAAGCTACAGGGGCCCCAGACAGCCCGGGAGCT...CCTTTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGTCAGCTCAGGCATCCAGACCCTTCCCTTGGCAGCCTTTGCCCCATCTTAGCTCCCGGGCTGTCTaGGGCCCCTGTAGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSAQASRPFPWQPLPHLSSRAV*GPCSFC Trigger: GCAGAAGCTACAGGGGCCCCAGACAGCCCGGGAGCT...AAGATGGGGCAAAGGCTGCCAAGGGAAGGGTCTGGATGCCTGAGCTGACACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGCCAGAGATGCCTGTGGAGAGCAACTCTTGTGCCAGAGTAGCCTGGGGCCTTCAAGTGGCCCTTaGGCTGGTCACAGATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PRARDACGEQLLCQSSLGPSSGP*AGHRSC Trigger: GCAAGATCTGTGACCAGCTCAAGGGCCACTTGAAGG...CCCCAGGCTACTCTGGCACAAGAGTTGCTCTCCACAGGCATCTCTGGCCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR GCA 90 bp | GCCTCCTGTCCTCAGGGTCCTTCAGAGAGGACTCTGCTAGATGGGGAGTCCTGGTGGCTGAGCCCCAGTTaGCAGAGCCGACAATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASCPQGPSERTLLDGESWWLSPS*QSRQCR Trigger: TCTGCATTGTCGGCTCTGGCAACTGGGGCTCAGCCA...CCAGGACTCCCCATCTAGCAGAGTCCTCTCTGAAGGACCCTGAGGACAGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGGGTCCGATCTCGCGAGGACCTTGTTCTGTTCCGAGGACAGCTGGCCTTGGCACGCTCATGGGAATaGCAAGGCGCTCCCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: VWVRSREDLVLFRGQLALARSWE*QGAPQS Trigger: TGATTGGGGAGCGCCTTGGCATTCCCATGAGCGTGC...CAAGGCCAGCTGTCCTCGGAACAGAACAAGGTCCTCGCGAGATCGGACCCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR GCA 90 bp | CCCAGGGCCAGAGATGCCTGTGGAGAGCAACTCTTGTGCCAGAGTAGCCTGGGGAGGACACAGTGCCACTaGAGAAGAGCTTGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRARDACGEQLLCQSSLGRTQCH*RRAWRR Trigger: CCTTCGCCAAGCTCTTCTGCAGTGGCACTGTGTCCT...CCCCAGGCTACTCTGGCACAAGAGTTGCTCTCCACAGGCATCTCTGGCCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR GCA 90 bp | TGGGACCGGTTCCCAGTGTGTGTGAGGCAGCAACCGGCAGCCCTTGACTTGGCGGGCCCCTGTAGCTTCTaGCCATTTAGCATCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WDRFPVCVRQQPAALDLAGPCSF*PFSISF Trigger: GAAGGAGATGCTAAATGGGCAGAAGCTACAGGGGCC...CGCCAAGTCAAGGGCTGCCGGTTGCTGCCTCACACACACTGGGAACCGGTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGTCAGCTCAGGCATCCAGACCCTTCCCTTGGCAGCCTTTGCCCCATCTTGGATGGCCACCACATTaGGGGGCAGCTTGTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSAQASRPFPWQPLPHLGWPPH*GAACAL Trigger: CAGGGCACAAGCTGCCCCCCAATGTGGTGGCCATCC...AAGATGGGGCAAAGGCTGCCAAGGGAAGGGTCTGGATGCCTGAGCTGACACAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTGTGTGAGGCAGCAACCGGCAGCCCTTGACTTGGCGCCTTCCCTTCCCGTATTGGCCTTCAAGTaGCCCTTGAGCTGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PVCVRQQPAALDLAPSLPVLAFK*PLSWSQ Trigger: CTGTGACCAGCTCAAGGGCCACTTGAAGGCCAATAC...GGGAAGGGAAGGCGCCAAGTCAAGGGCTGCCGGTTGCTGCCTCACACACACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | CGGTTCCCAGTGTGTGTGAGGCAGCAACCGGCAGCCCTTGACTTGGCGCCTTCCACAAGGCCCTTGTGTTaGAGAATGCTGTGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RFPVCVRQQPAALDLAPSTRPLC*RMLCSS Trigger: GGAGCTGCACAGCATTCTCCAACACAAGGGCCTTGT...GGAAGGCGCCAAGTCAAGGGCTGCCGGTTGCTGCCTCACACACACTGGGAACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| 3UTR CAA 72 bp | GGGGTCTGTGTCAGCTCAGGCATCCAGACCCTTCCCTaGGCAGCCTTTGCCCCATCTTTCCTGTGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVCVSSGIQTLP*AAFAPSFLWLK Trigger: CTTCAGCCACAGGAAAGATGGGGCAAAGGCTGCCAAGGGAAGGGTCTGGATGCCTGAGCTGACACAGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGGGAAAGGTCACACAGGGTGGGGAGGCCCTGACAAAGCTCCAGGAACCCCAGCCGGCCTGCATTaGTACCCACGATCTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KAGKGHTGWGGPDKAPGTPAGLH*YPRSWQ Trigger: TTGCCAAGATCGTGGGTAGCAATGCAGGCCGGCTGG...GGTTCCTGGAGCTTTGTCAGGGCCTCCCCACCCTGTGTGACCTTTCCCAGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR GCA 90 bp | GCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAAAGGCCGTGGGTCAAAGTGTaGCAGCCGGCCTGCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ANSEIVDVVWGLAEVGQRPWVKV*QPACIA Trigger: AGCAATGCAGGCCGGCTGGCACACTTTGACCCACGG...CCTTTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCCTGTCCTCAGGGTCCTTCAGAGAGGACTCTGCTAGATGGGGAGTCCTGGTGCTACCCACGATCTTaGCAATGGCTGAGCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASCPQGPSERTLLDGESWCYPRS*QWLSPS Trigger: ACTGGGGCTCAGCCATTGCCAAGATCGTGGGTAGCA...CCAGGACTCCCCATCTAGCAGAGTCCTCTCTGAAGGACCCTGAGGACAGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | GCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAAAGGCCACATGGTCACCCGTaGGTCAAAGTGTGCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ANSEIVDVVWGLAEVGQRPHGHP*VKVCQP Trigger: CGGCTGGCACACTTTGACCCACGGGTGACCATGTGG...CCTTTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | CAGACCCTTCCCTTGGCAGCCTTTGCCCCATCTTTCCTGTGGCTGAAGTGCTTCTGGCTGAGCCCCAGTTaGCAGAGCCGACAATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTLPLAAFAPSFLWLKCFWLSPS*QSRQCR Trigger: TCTGCATTGTCGGCTCTGGCAACTGGGGCTCAGCCA...GAAGCACTTCAGCCACAGGAAAGATGGGGCAAAGGCTGCCAAGGGAAGGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTGTGTGTGAGGCAGCAACCGGCAGCCCTTGACTTGGCGCCTTCCCTTCCCTCTCAGTTAGCTTTCTaGCCCCGATGTCTTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PVCVRQQPAALDLAPSLPSQLAF*PRCLPQ Trigger: TTGAGGAAGACATCGGGGGCAGAAAGCTAACTGAGA...GGGAAGGGAAGGCGCCAAGTCAAGGGCTGCCGGTTGCTGCCTCACACACACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | CAGACCCTTCCCTTGGCAGCCTTTGCCCCATCTTTCCTGTGGCTGAAGTGCTTCGCACGCTCATGGGAATaGCAAGGCGCTCCCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: QTLPLAAFAPSFLWLKCFARSWE*QGAPQS Trigger: TGATTGGGGAGCGCCTTGGCATTCCCATGAGCGTGC...GAAGCACTTCAGCCACAGGAAAGATGGGGCAAAGGCTGCCAAGGGAAGGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGGGTCCTTCAGAGAGGACTCTGCTAGATGGGGAGTCCTGGAGACAGTCTGGCCGAGGACACAGTaGCACTGCAGAAGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGSFREDSARWGVLETVWPRTQ*HCRRAW Trigger: CCAAGCTCTTCTGCAGTGGCACTGTGTCCTCGGCCA...GACTGTCTCCAGGACTCCCCATCTAGCAGAGTCCTCTCTGAAGGACCCTGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | CACTTCCCAGAGGACAGCAAGGAAGTGTGGATTCTGTGGCGAGCATCTCTAGGTGGTCGTGATGAGGTCTaGGACCCCGCAGCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HFPEDSKEVWILWRASLGGRDEV*DPAALQ Trigger: CTGGAGAGCTGCGGGGTCGCAGACCTCATCACGACC...ACCTAGAGATGCTCGCCACAGAATCCACACTTCCTTGCTGTCCTCTGGGAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | TGTCAGCTCAGGCATCCAGACCCTTCCCTTGGCAGCCTTTGCCCCATCTTTCCTTGTTGGAGAATGCTGTaGAGCTCCCGGGCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CQLRHPDPSLGSLCPIFPCWRML*SSRAVW Trigger: CCAGACAGCCCGGGAGCTGCACAGCATTCTCCAACA...AGGAAAGATGGGGCAAAGGCTGCCAAGGGAAGGGTCTGGATGCCTGAGCTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCCTGTCCTCAGGGTCCTTCAGAGAGGACTCTGCTAGATGGGGAGTCCTGGGGTCCTTGCAGCCGATaGTCGTCTCACAGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASCPQGPSERTLLDGESWGPCSR*SSHRTS Trigger: AGAAGTTCTGTGAGACGACCATCGGCTGCAAGGACC...CCAGGACTCCCCATCTAGCAGAGTCCTCTCTGAAGGACCCTGAGGACAGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTGTGTGAGGCAGCAACCGGCAGCCCTTGACTTGGCGCCTTCCCTTCCCTCTCCAGCTGCTCAATaGACTTTCCAGTTCGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PVCVRQQPAALDLAPSLPSPAAQ*TFQFEQ Trigger: TTGCTCGAACTGGAAAGTCCATTGAGCAGCTGGAGA...GGGAAGGGAAGGCGCCAAGTCAAGGGCTGCCGGTTGCTGCCTCACACACACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR TCA 90 bp | CACTTCCCAGAGGACAGCAAGGAAGTGTGGATTCTGTGGCGAGCATCTCTAGGTAGGCGATCATCTCCATaGGCCCCAACCGGATCACCG | + |
|
Preference number: 4 (lower is better) Translates to: HFPEDSKEVWILWRASLGRRSSP*APTGSP Trigger: CGGTGATCCGGTTGGGGCTCATGGAGATGATCGCCT...ACCTAGAGATGCTCGCCACAGAATCCACACTTCCTTGCTGTCCTCTGGGAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAAAGGCGATCATCTCCATaGGCCCCAACCGGATCACCG | + |
|
Preference number: 4 (lower is better) Translates to: LANSEIVDVVWGLAEVGQRRSSP*APTGSP Trigger: CGGTGATCCGGTTGGGGCTCATGGAGATGATCGCCT...TTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTCAGAGAGGACTCTGCTAGATGGGGAGTCCTGGAGACAGTCCTGATGACGTGTTGGAGAATGCTGTaGAGCTCCCGGGCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFREDSARWGVLETVLMTCWRML*SSRAVW Trigger: CCAGACAGCCCGGGAGCTGCACAGCATTCTCCAACA...CGTCATCAGGACTGTCTCCAGGACTCCCCATCTAGCAGAGTCCTCTCTGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | CACTTCCCAGAGGACAGCAAGGAAGTGTGGATTCTGTGGCGAGCATCTCTAGGTCCACATGGTCACCCGTaGGTCAAAGTGTGCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HFPEDSKEVWILWRASLGPHGHP*VKVCQP Trigger: CGGCTGGCACACTTTGACCCACGGGTGACCATGTGG...ACCTAGAGATGCTCGCCACAGAATCCACACTTCCTTGCTGTCCTCTGGGAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | ACACTTCCCAGAGGACAGCAAGGAAGTGTGGATTCTGTGGCGAGCATCTCTAGGAGCTCTCCAGGAAGGTaGCCGAGGACACAGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLPRGQQGSVDSVASISRSSPGR*PRTQCH Trigger: GTGGCACTGTGTCCTCGGCCACCTTCCTGGAGAGCT...CCTAGAGATGCTCGCCACAGAATCCACACTTCCTTGCTGTCCTCTGGGAAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGGCCAGAGATGCCTGTGGAGAGCAACTCTTGTGCCAGAGTAGCCTGGGGGATCTCCTTCTCCAGCTaGTCAATGGACTTTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGPEMPVESNSCARVAWGISFSS*SMDFPV Trigger: AACTGGAAAGTCCATTGAGCAGCTGGAGAAGGAGAT...CCCCCAGGCTACTCTGGCACAAGAGTTGCTCTCCACAGGCATCTCTGGCCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR GCA 90 bp | CAGACCCTTCCCTTGGCAGCCTTTGCCCCATCTTTCCTGTGGCTGAAGTGCTTCGGCCCCTGTAGCTTCTaGCCATTTAGCATCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTLPLAAFAPSFLWLKCFGPCSF*PFSISF Trigger: GAAGGAGATGCTAAATGGGCAGAAGCTACAGGGGCC...GAAGCACTTCAGCCACAGGAAAGATGGGGCAAAGGCTGCCAAGGGAAGGGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAACCTTGTGTTGGAGAATaGTGTGCAGCTCCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LANSEIVDVVWGLAEVGQPCVGE*CAAPGL Trigger: CAGCCCGGGAGCTGCACAGCATTCTCCAACACAAGG...TTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | GCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAAAGGGGTCCTTGCAGCCGATaGTCGTCTCACAGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ANSEIVDVVWGLAEVGQRGPCSR*SSHRTS Trigger: AGAAGTTCTGTGAGACGACCATCGGCTGCAAGGACC...CCTTTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCCTGTCCTCAGGGTCCTTCAGAGAGGACTCTGCTAGATGGGGAGTCCTGGTCTCCAGCTGCTCAATaGACTTTCCAGTTCGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASCPQGPSERTLLDGESWSPAAQ*TFQFEQ Trigger: TTGCTCGAACTGGAAAGTCCATTGAGCAGCTGGAGA...CCAGGACTCCCCATCTAGCAGAGTCCTCTCTGAAGGACCCTGAGGACAGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | TGTCAGCTCAGGCATCCAGACCCTTCCCTTGGCAGCCTTTGCCCCATCTTTCCTACAAGGCCCTTGTGTTaGAGAATGCTGTGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQLRHPDPSLGSLCPIFPTRPLC*RMLCSS Trigger: GGAGCTGCACAGCATTCTCCAACACAAGGGCCTTGT...AGGAAAGATGGGGCAAAGGCTGCCAAGGGAAGGGTCTGGATGCCTGAGCTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| 3UTR CAA 72 bp | TTTAATATCAAGCTGGCCAGAGCCACGGTGTCCCAGTaGCTGCCACACAGGAAATGGAGACCCCTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FNIKLARATVSQ*LPHRKWRPLVE Trigger: CTCCACCAGGGGTCTCCATTTCCTGTGTGGCAGCAACTGGGACACCGTGGCTCTGGCCAGCTTGATATTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR GCA 90 bp | GCCCCATCTTTCCTGTGGCTGAAGTGCTTCTTCAGTCACTTAATGGGACTTGGGGTGTGCCAGCCGGCCTaGATTGCTACCCACGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: APSFLWLKCFFSHLMGLGVCQPA*IATHDL Trigger: AAGATCGTGGGTAGCAATGCAGGCCGGCTGGCACAC...CCCAAGTCCCATTAAGTGACTGAAGAAGCACTTCAGCCACAGGAAAGATGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | TGCCACACAGGAAATGGAGACCCCTGGTGGAGAGAGAAACCTCCAGCTATTTATCCGTGGGTCAAAGTGTaGCAGCCGGCCTGCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CHTGNGDPWWREKPPAIYPWVKV*QPACIA Trigger: AGCAATGCAGGCCGGCTGGCACACTTTGACCCACGG...ATAAATAGCTGGAGGTTTCTCTCTCCACCAGGGGTCTCCATTTCCTGTGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR GCA 90 bp | CACTTCCCAGAGGACAGCAAGGAAGTGTGGATTCTGTGGCGAGCATCTCTAGGTAGGACACAGTGCCACTaGAGAAGAGCTTGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFPEDSKEVWILWRASLGRTQCH*RRAWRR Trigger: CCTTCGCCAAGCTCTTCTGCAGTGGCACTGTGTCCT...ACCTAGAGATGCTCGCCACAGAATCCACACTTCCTTGCTGTCCTCTGGGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | ACACTTCCCAGAGGACAGCAAGGAAGTGTGGATTCTGTGGCGAGCATCTCTAGGTGCTACCCACGATCTTaGCAATGGCTGAGCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLPRGQQGSVDSVASISRCYPRS*QWLSPS Trigger: ACTGGGGCTCAGCCATTGCCAAGATCGTGGGTAGCA...CCTAGAGATGCTCGCCACAGAATCCACACTTCCTTGCTGTCCTCTGGGAAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | CACTTCCCAGAGGACAGCAAGGAAGTGTGGATTCTGTGGCGAGCATCTCTAGGTTGCCAGAGCCGACAATaGAGACTTTCTTGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HFPEDSKEVWILWRASLGCQSRQ*RLSCQP Trigger: TGGCTGGCAAGAAAGTCTGCATTGTCGGCTCTGGCA...ACCTAGAGATGCTCGCCACAGAATCCACACTTCCTTGCTGTCCTCTGGGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | GCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAAAGGTCTCAGTTAGCTTTCTaGCCCCGATGTCTTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ANSEIVDVVWGLAEVGQRSQLAF*PRCLPQ Trigger: TTGAGGAAGACATCGGGGGCAGAAAGCTAACTGAGA...CCTTTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTGGGGTCTGTGTCAGCTCAGGCATCCAGACCCTTCCCTTGGCAGCCTTTGATCTCCTTCTCCAGCTaGTCAATGGACTTTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLGSVSAQASRPFPWQPLISFSS*SMDFPV Trigger: AACTGGAAAGTCCATTGAGCAGCTGGAGAAGGAGAT...CAAAGGCTGCCAAGGGAAGGGTCTGGATGCCTGAGCTGACACAGACCCCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTCCGAGGACAGCTGGCCTTGGACTAGGACCCACCAACCCTTGTGGAAAAAGTGGCCCTTGAGCTaGTCACAGATCTTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: FCSEDSWPWTRTHQPLWKKWPLS*SQILPM Trigger: CATTGGCAAGATCTGTGACCAGCTCAAGGGCCACTT...TTTCCACAAGGGTTGGTGGGTCCTAGTCCAAGGCCAGCTGTCCTCGGAACAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR CCA 90 bp | TTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAACACTGCAGAAGAGCTTaGCGAAGGCGATCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LANSEIVDVVWGLAEVGQHCRRA*RRRSSP Trigger: TGGAGATGATCGCCTTCGCCAAGCTCTTCTGCAGTG...TTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | CACTTCCCAGAGGACAGCAAGGAAGTGTGGATTCTGTGGCGAGCATCTCTAGGTAAGTGGCCCTTGAGCTaGTCACAGATCTTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: HFPEDSKEVWILWRASLGKWPLS*SQILPM Trigger: CATTGGCAAGATCTGTGACCAGCTCAAGGGCCACTT...ACCTAGAGATGCTCGCCACAGAATCCACACTTCCTTGCTGTCCTCTGGGAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCATCTTTCCTGTGGCTGAAGTGCTTCTTCAGTCACTTAATGGGACTTGGGGTATTGGCCTTCAAGTaGCCCTTGAGCTGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: APSFLWLKCFFSHLMGLGVLAFK*PLSWSQ Trigger: CTGTGACCAGCTCAAGGGCCACTTGAAGGCCAATAC...CCCAAGTCCCATTAAGTGACTGAAGAAGCACTTCAGCCACAGGAAAGATGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAACACAGATCTTGCCAATaGACTGATGGGGTACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LANSEIVDVVWGLAEVGQHRSCQ*TDGVPQ Trigger: TTGTGGTACCCCATCAGTTCATTGGCAAGATCTGTG...TTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR TCA 90 bp | GAGCTTTGTATTTTGTTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGTCTGCAGACAGCGGATaGATTCGCCCACTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELCILLANSEIVDVVWGLSADSG*IRPLAG Trigger: GCCAGCCAGTGGGCGAATTCATCCGCTGTCTGCAGA...CAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAACAAAATACAAAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTCCTGTGGCTGAAGTGCTTCTTCAGTCACTTAATGGGACTTGGGACCGGTCGAAAGTTGGGTGTCTaGATCAGGTCCTTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFLWLKCFFSHLMGLGTGRKLGV*IRSFRS Trigger: GCTCCTGAAGGACCTGATGCAGACACCCAACTTTCG...ACCGGTCCCAAGTCCCATTAAGTGACTGAAGAAGCACTTCAGCCACAGGAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCCTTTGCCCCATCTTTCCTGTGGCTGAAGTGCTTCTTCAGTCACTTAATGCGAAAGTTGGGTGTCTaGATCAGGTCCTTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAFAPSFLWLKCFFSHLMRKLGV*IRSFRS Trigger: GCTCCTGAAGGACCTGATGCAGACACCCAACTTTCG...CATTAAGTGACTGAAGAAGCACTTCAGCCACAGGAAAGATGGGGCAAAGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | TGCCACACAGGAAATGGAGACCCCTGGTGGAGAGAGAAACCTCCAGCTATTTATCCTCAAACACCCACATaGTCACCCGTGGGTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CHTGNGDPWWREKPPAIYPQTPT*SPVGQS Trigger: ACTTTGACCCACGGGTGACCATGTGGGTGTTTGAGG...ATAAATAGCTGGAGGTTTCTCTCTCCACCAGGGGTCTCCATTTCCTGTGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| 3UTR CAA 72 bp | AGGACCCACCAACCCTTGTGGAAACCTACTGAACCTTaGAGCTGCTCCTTAGTTCTAAGCCTACAGATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RTHQPLWKPTEP*SCSLVLSLQMP Trigger: CGGCATCTGTAGGCTTAGAACTAAGGAGCAGCTCAAAGGTTCAGTAGGTTTCCACAAGGGTTGGTGGGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR TCA 90 bp | ACACTTCCCAGAGGACAGCAAGGAAGTGTGGATTCTGTGGCGAGCATCTCTAGGTTAACATTCTCGTGCTaGGTGTTGATGATCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLPRGQQGSVDSVASISRLTFSC*VLMISV Trigger: AACTGAGATCATCAACACTCAGCACGAGAATGTTAA...CCTAGAGATGCTCGCCACAGAATCCACACTTCCTTGCTGTCCTCTGGGAAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR GCA 90 bp | GAGCTTTGTATTTTGTTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGTGCCAGAGCCGACAATaGAGACTTTCTTGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELCILLANSEIVDVVWGLCQSRQ*RLSCQP Trigger: TGGCTGGCAAGAAAGTCTGCATTGTCGGCTCTGGCA...CAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAACAAAATACAAAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTTTGTATTTTGTTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGCACTGCAGAAGAGCTTaGCGAAGGCGATCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELCILLANSEIVDVVWGLHCRRA*RRRSSP Trigger: TGGAGATGATCGCCTTCGCCAAGCTCTTCTGCAGTG...CAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAACAAAATACAAAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR TCA 90 bp | GAGCTTTGTATTTTGTTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGTTAACATTCTCGTGCTaGGTGTTGATGATCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ELCILLANSEIVDVVWGLLTFSC*VLMISV Trigger: AACTGAGATCATCAACACTCAGCACGAGAATGTTAA...CAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAACAAAATACAAAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS GCA 90 bp | CCCACATGGTCACCCGTGGGTCAAAGTGTGCCAGCCGGCCTGCATTaGTACCCACGATCTTGGCAATGGCTGAGCCCCAGTTGCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PTWSPVGQSVPAGLH*YPRSWQWLSPSCQS Trigger: GCTCTGGCAACTGGGGCTCAGCCATTGCCAAGATCGTGGGTAGCAATGCAGGCCGGCTGGCACACTTTGACCCACGGGTGACCATGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTCCTGTCCTCAGGGTCCTTCAGAGAGGACTCTGCTAGATGGGGAGTCCTTGCTACCCACGATCTaGGCAATGGCTGAGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AASCPQGPSERTLLDGESLLPTI*AMAEPQ Trigger: CTGGGGCTCAGCCATTGCCAAGATCGTGGGTAGCAA...GGACTCCCCATCTAGCAGAGTCCTCTCTGAAGGACCCTGAGGACAGGAGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | TTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAACCCTGGGCCGGGTCCTaGCAGCCGATGGTCGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LANSEIVDVVWGLAEVGQPWAGS*QPMVVS Trigger: TGAGACGACCATCGGCTGCAAGGACCCGGCCCAGGG...TTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGGGTCCTTCAGAGAGGACTCTGCTAGATGGGGAGTCCTGGAGACAGTCACCGCCGCCTTGGTGTaGTCACCGAAGCCAAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSGSFREDSARWGVLETVTAALV*SPKPSP Trigger: TGGGCTTGGCTTCGGTGACAACACCAAGGCGGCGGT...GACTGTCTCCAGGACTCCCCATCTAGCAGAGTCCTCTCTGAAGGACCCTGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS GCA 90 bp | ACTGTGTCCACCTCTTGTACCACAGTGATGCGAAAGTTGGGTGTCTaGATCAGGTCCTTCAGGAGCTGTCCCTGGGCCGGGTCCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TVSTSCTTVMRKLGV*IRSFRSCPWAGSLQ Trigger: CTGCAAGGACCCGGCCCAGGGACAGCTCCTGAAGGACCTGATGCAGACACCCAACTTTCGCATCACTGTGGTACAAGAGGTGGACACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS CCA 90 bp | CTTTCTGCCCCCGATGTCTTCCTCAAACACCCACATGGTCACCCGTaGGTCAAAGTGTGCCAGCCGGCCTGCATTGCTACCCACGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSAPDVFLKHPHGHP*VKVCQPACIATHDL Trigger: AAGATCGTGGGTAGCAATGCAGGCCGGCTGGCACACTTTGACCCACGGGTGACCATGTGGGTGTTTGAGGAAGACATCGGGGGCAGAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGCTGAAGTGCTTCTTCAGTCACTTAATGGGACTTGGGACCGGTTCCCAGCCAGCCGGCCTGCATaGCTACCCACGATCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVAEVLLQSLNGTWDRFPASRPA*LPTILA Trigger: TGCCAAGATCGTGGGTAGCAATGCAGGCCGGCTGGC...TGGGAACCGGTCCCAAGTCCCATTAAGTGACTGAAGAAGCACTTCAGCCACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | TCTTTCCTGTGGCTGAAGTGCTTCTTCAGTCACTTAATGGGACTTGGGACCGGTCCCTGGGCCGGGTCCTaGCAGCCGATGGTCGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFLWLKCFFSHLMGLGTGPWAGS*QPMVVS Trigger: TGAGACGACCATCGGCTGCAAGGACCCGGCCCAGGG...ACCGGTCCCAAGTCCCATTAAGTGACTGAAGAAGCACTTCAGCCACAGGAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | TTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAAACCGCCGCCTTGGTGTaGTCACCGAAGCCAAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LANSEIVDVVWGLAEVGQTAALV*SPKPSP Trigger: TGGGCTTGGCTTCGGTGACAACACCAAGGCGGCGGT...TTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | CCCAACTTTGGAACAGGGCCAGTGCAAAGCAGTCTCCCATCCCCCTCTGATCTCCCACTGCAGAAGAGCTaGGCGAAGGCGATCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PNFGTGPVQSSLPSPSDLPLQKS*AKAIIS Trigger: GGAGATGATCGCCTTCGCCAAGCTCTTCTGCAGTGG...GAGATCAGAGGGGGATGGGAGACTGCTTTGCACTGGCCCTGTTCCAAAGTTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS CCA 90 bp | TCTCAGTTAGCTTTCTGCCCCCGATGTCTTCCTCAAACACCCACATaGTCACCCGTGGGTCAAAGTGTGCCAGCCGGCCTGCATTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SQLAFCPRCLPQTPT*SPVGQSVPAGLHCY Trigger: GTAGCAATGCAGGCCGGCTGGCACACTTTGACCCACGGGTGACCATGTGGGTGTTTGAGGAAGACATCGGGGGCAGAAAGCTAACTGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCTGTGTCAGCTCAGGCATCCAGACCCTTCCCTTGGCAGCCTTTGCCCCATCACTGTGTCCACCTCTaGTACCACAGTGATGCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSVSAQASRPFPWQPLPHHCVHL*YHSDAK Trigger: TTTCGCATCACTGTGGTACAAGAGGTGGACACAGTG...ATGGGGCAAAGGCTGCCAAGGGAAGGGTCTGGATGCCTGAGCTGACACAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | CACTTCCCAGAGGACAGCAAGGAAGTGTGGATTCTGTGGCGAGCATCTCTAGGTTTGCTACCCACGATCTaGGCAATGGCTGAGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HFPEDSKEVWILWRASLGLLPTI*AMAEPQ Trigger: CTGGGGCTCAGCCATTGCCAAGATCGTGGGTAGCAA...ACCTAGAGATGCTCGCCACAGAATCCACACTTCCTTGCTGTCCTCTGGGAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCAGGGTCCTTCAGAGAGGACTCTGCTAGATGGGGAGTCCTGGAGACAGTCACAGTGATGCGAAAGTaGGGTGTCTGCATCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSGSFREDSARWGVLETVTVMRK*GVCIRS Trigger: GGACCTGATGCAGACACCCAACTTTCGCATCACTGT...GACTGTCTCCAGGACTCCCCATCTAGCAGAGTCCTCTCTGAAGGACCCTGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | TTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAACCACTGCAGAAGAGCTaGGCGAAGGCGATCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LANSEIVDVVWGLAEVGQPLQKS*AKAIIS Trigger: GGAGATGATCGCCTTCGCCAAGCTCTTCTGCAGTGG...TTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS TCA 90 bp | GCCTTCAAGTGGCCCTTGAGCTGGTCACAGATCTTGCCAATGAACTaGTGGGGTACCACAAAAACCAGGATGTCAGCGCCTGTTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AFKWPLSWSQILPMN*WGTTKTRMSAPVAA Trigger: GGCTGCAACAGGCGCTGACATCCTGGTTTTTGTGGTACCCCATCAGTTCATTGGCAAGATCTGTGACCAGCTCAAGGGCCACTTGAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS TCA 90 bp | TCAAGGCCCCACAGATCTCCACTGTGTCCACCTCTTGTACCACAGTaGTGCGAAAGTTGGGTGTCTGCATCAGGTCCTTCAGGAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRPHRSPLCPPLVPQ*CESWVSASGPSGAV Trigger: GACAGCTCCTGAAGGACCTGATGCAGACACCCAACTTTCGCATCACTGTGGTACAAGAGGTGGACACAGTGGAGATCTGTGGGGCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGTTCCGAGGACAGCTGGCCTTGGACTAGGACCCACCAACCCTTGTGGAAAACAGTGATGCGAAAGTaGGGTGTCTGCATCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FCSEDSWPWTRTHQPLWKTVMRK*GVCIRS Trigger: GGACCTGATGCAGACACCCAACTTTCGCATCACTGT...TTTCCACAAGGGTTGGTGGGTCCTAGTCCAAGGCCAGCTGTCCTCGGAACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
||
| CDS-3UTR CAA 90 bp | TTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCAGAGGTCGGCCAACACAAGGCCCTTGTGTaGGAGAATGCTGTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LANSEIVDVVWGLAEVGQHKALV*ENAVQL Trigger: GAGCTGCACAGCATTCTCCAACACAAGGGCCTTGTG...TTGGCCGACCTCTGCCAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | CCAGACCCTTCCCTTGGCAGCCTTTGCCCCATCTTTCCTGTGGCTGAAGTGCTTAGCTGGTCACAGATCTaGCCAATGAACACATTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PDPSLGSLCPIFPVAEVLSWSQI*PMNTLG Trigger: CCCCAATGTGTTCATTGGCAAGATCTGTGACCAGCT...AAGCACTTCAGCCACAGGAAAGATGGGGCAAAGGCTGCCAAGGGAAGGGTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | GCCCCATCTTTCCTGTGGCTGAAGTGCTTCTTCAGTCACTTAATGGGACTTGGGCACAAGGCCCTTGTGTaGGAGAATGCTGTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: APSFLWLKCFFSHLMGLGHKALV*ENAVQL Trigger: GAGCTGCACAGCATTCTCCAACACAAGGGCCTTGTG...CCCAAGTCCCATTAAGTGACTGAAGAAGCACTTCAGCCACAGGAAAGATGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
||
| CDS-3UTR CAA 90 bp | GAGCTTTGTATTTTGTTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGCCAGCCGGCCTGCATaGCTACCCACGATCTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: ELCILLANSEIVDVVWGLASRPA*LPTILA Trigger: TGCCAAGATCGTGGGTAGCAATGCAGGCCGGCTGGC...CAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAACAAAATACAAAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS-3UTR CAA 90 bp | GAGCTTTGTATTTTGTTAGCAAACAGTGAGATCGTTGATGTTGTGTGGGGCCTGGGATGTCAGCGCCTGTaGCAGCCTGGACCACGTCTG | + |
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Preference number: 5 (lower is better) Translates to: ELCILLANSEIVDVVWGLGCQRL*QPGPRL Trigger: CAGACGTGGTCCAGGCTGCAACAGGCGCTGACATCC...CAGGCCCCACACAACATCAACGATCTCACTGTTTGCTAACAAAATACAAAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| CDS-3UTR CAA 90 bp | TGCCACACAGGAAATGGAGACCCCTGGTGGAGAGAGAAACCTCCAGCTATTTATCACTGTGTCCACCTCTaGTACCACAGTGATGCGAAA | + |
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Preference number: 5 (lower is better) Translates to: CHTGNGDPWWREKPPAIYHCVHL*YHSDAK Trigger: TTTCGCATCACTGTGGTACAAGAGGTGGACACAGTG...ATAAATAGCTGGAGGTTTCTCTCTCCACCAGGGGTCTCCATTTCCTGTGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| CDS CCA 90 bp | TCTACCCCCTTAATAAGAGATATGCCAATAGTATTGGCCTTCAAGTaGCCCTTGAGCTGGTCACAGATCTTGCCAATGAACACATTGGGG | + |
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Preference number: 5 (lower is better) Translates to: STPLIRDMPIVLAFK*PLSWSQILPMNTLG Trigger: CCCCAATGTGTTCATTGGCAAGATCTGTGACCAGCTCAAGGGCCACTTGAAGGCCAATACTATTGGCATATCTCTTATTAAGGGGGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162194.2 |
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| CDS CAA 90 bp | GCGATCATCTCCATGAGCCCCAACCGGATCACCGCCGCCTTGGTGTaGTCACCGAAGCCAAGCCCATCACAGAAGCCAGCCCCAACGGCC | + |
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Preference number: 6 (lower is better) Translates to: AIISMSPNRITAALV*SPKPSPSQKPAPTA Trigger: GGCCGTTGGGGCTGGCTTCTGTGATGGGCTTGGCTTCGGTGACAACACCAAGGCGGCGGTGATCCGGTTGGGGCTCATGGAGATGATCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CAA 90 bp | GCGAAGGCGATCATCTCCATGAGCCCCAACCGGATCACCGCCGCCTaGGTGTTGTCACCGAAGCCAAGCCCATCACAGAAGCCAGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: AKAIISMSPNRITAA*VLSPKPSPSQKPAP Trigger: TGGGGCTGGCTTCTGTGATGGGCTTGGCTTCGGTGACAACACCAAGGCGGCGGTGATCCGGTTGGGGCTCATGGAGATGATCGCCTTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CCA 72 bp | TTGGGTGTCTGCATCAGGTCCTTCAGGAGCTGTCCCTaGGCCGGGTCCTTGCAGCCGATGGTCGTCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: LGVCIRSFRSCP*AGSLQPMVVSQ Trigger: CTGTGAGACGACCATCGGCTGCAAGGACCCGGCCCAGGGACAGCTCCTGAAGGACCTGATGCAGACACCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CAA 72 bp | GTCACCCGTGGGTCAAAGTGTGCCAGCCGGCCTGCATaGCTACCCACGATCTTGGCAATGGCTGAGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: VTRGSKCASRPA*LPTILAMAEPQ Trigger: CTGGGGCTCAGCCATTGCCAAGATCGTGGGTAGCAATGCAGGCCGGCTGGCACACTTTGACCCACGGGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CAA 72 bp | TCCATGAGCCCCAACCGGATCACCGCCGCCTTGGTGTaGTCACCGAAGCCAAGCCCATCACAGAAGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SMSPNRITAALV*SPKPSPSQKPA Trigger: GGCTGGCTTCTGTGATGGGCTTGGCTTCGGTGACAACACCAAGGCGGCGGTGATCCGGTTGGGGCTCATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CAA 90 bp | ACCCACATGGTCACCCGTGGGTCAAAGTGTGCCAGCCGGCCTGCATaGCTACCCACGATCTTGGCAATGGCTGAGCCCCAGTTGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: THMVTRGSKCASRPA*LPTILAMAEPQLPE Trigger: CTCTGGCAACTGGGGCTCAGCCATTGCCAAGATCGTGGGTAGCAATGCAGGCCGGCTGGCACACTTTGACCCACGGGTGACCATGTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS GCA 72 bp | TCACCCGTGGGTCAAAGTGTGCCAGCCGGCCTGCATTaGTACCCACGATCTTGGCAATGGCTGAGCCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SPVGQSVPAGLH*YPRSWQWLSPS Trigger: ACTGGGGCTCAGCCATTGCCAAGATCGTGGGTAGCAATGCAGGCCGGCTGGCACACTTTGACCCACGGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CCA 72 bp | AGTGTGCCAGCCGGCCTGCATTGCTACCCACGATCTTaGCAATGGCTGAGCCCCAGTTGCCAGAGCCGACAA | + |
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Preference number: 6 (lower is better) Translates to: SVPAGLHCYPRS*QWLSPSCQSRQ Trigger: TTGTCGGCTCTGGCAACTGGGGCTCAGCCATTGCCAAGATCGTGGGTAGCAATGCAGGCCGGCTGGCACACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CAA 72 bp | AAGTGTGCCAGCCGGCCTGCATTGCTACCCACGATCTaGGCAATGGCTGAGCCCCAGTTGCCAGAGCCGACA | + |
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Preference number: 6 (lower is better) Translates to: KCASRPALLPTI*AMAEPQLPEPT Trigger: TGTCGGCTCTGGCAACTGGGGCTCAGCCATTGCCAAGATCGTGGGTAGCAATGCAGGCCGGCTGGCACACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CAA 72 bp | AAGGTGGCCGAGGACACAGTGCCACTGCAGAAGAGCTaGGCGAAGGCGATCATCTCCATGAGCCCCAACCGG | + |
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Preference number: 6 (lower is better) Translates to: KVAEDTVPLQKS*AKAIISMSPNR Trigger: CCGGTTGGGGCTCATGGAGATGATCGCCTTCGCCAAGCTCTTCTGCAGTGGCACTGTGTCCTCGGCCACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CAA 90 bp | CGTGGGTCAAAGTGTGCCAGCCGGCCTGCATTGCTACCCACGATCTaGGCAATGGCTGAGCCCCAGTTGCCAGAGCCGACAATGCAGACT | + |
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Preference number: 6 (lower is better) Translates to: RGSKCASRPALLPTI*AMAEPQLPEPTMQT Trigger: AGTCTGCATTGTCGGCTCTGGCAACTGGGGCTCAGCCATTGCCAAGATCGTGGGTAGCAATGCAGGCCGGCTGGCACACTTTGACCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS TCA 72 bp | CACTGCAGAAGAGCTTGGCGAAGGCGATCATCTCCATaGGCCCCAACCGGATCACCGCCGCCTTGGTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: HCRRAWRRRSSP*APTGSPPPWCC Trigger: ACAACACCAAGGCGGCGGTGATCCGGTTGGGGCTCATGGAGATGATCGCCTTCGCCAAGCTCTTCTGCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS GCA 72 bp | CTCAAACACCCACATGGTCACCCGTGGGTCAAAGTGTaGCAGCCGGCCTGCATTGCTACCCACGATCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LKHPHGHPWVKV*QPACIATHDLG Trigger: GCCAAGATCGTGGGTAGCAATGCAGGCCGGCTGGCACACTTTGACCCACGGGTGACCATGTGGGTGTTTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS GCA 72 bp | AACTTGTCCACAAGGCCCTTGTGTTGGAGAATGCTGTaGAGCTCCCGGGCTGTCTGGGGCCCCTGTAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: NLSTRPLCWRML*SSRAVWGPCSF Trigger: GAAGCTACAGGGGCCCCAGACAGCCCGGGAGCTGCACAGCATTCTCCAACACAAGGGCCTTGTGGACAAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CAA 90 bp | CAGATCTCCACTGTGTCCACCTCTTGTACCACAGTGATGCGAAAGTaGGGTGTCTGCATCAGGTCCTTCAGGAGCTGTCCCTGGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: QISTVSTSCTTVMRK*GVCIRSFRSCPWAG Trigger: CCCGGCCCAGGGACAGCTCCTGAAGGACCTGATGCAGACACCCAACTTTCGCATCACTGTGGTACAAGAGGTGGACACAGTGGAGATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS GCA 72 bp | ACCTCTTGTACCACAGTGATGCGAAAGTTGGGTGTCTaGATCAGGTCCTTCAGGAGCTGTCCCTGGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: TSCTTVMRKLGV*IRSFRSCPWAG Trigger: CCCGGCCCAGGGACAGCTCCTGAAGGACCTGATGCAGACACCCAACTTTCGCATCACTGTGGTACAAGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS GCA 72 bp | ATGGGGTACCACAAAAACCAGGATGTCAGCGCCTGTTaGAGCCTGGACCACGTCTGGGATGGCCACCACATT | + |
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Preference number: 6 (lower is better) Translates to: MGYHKNQDVSAC*SLDHVWDGHHI Trigger: AATGTGGTGGCCATCCCAGACGTGGTCCAGGCTGCAACAGGCGCTGACATCCTGGTTTTTGTGGTACCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023760.13 |
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| CDS TCA 72 bp | CTGGCTGGCCCTCATAGCACACTTTGTACACCGCAGTaGACAAGGGGAACTTGTCCACAAGGCCCTTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: LAGPHSTLCTPQ*TRGTCPQGPCV Trigger: AACACAAGGGCCTTGTGGACAAGTTCCCCTTGTTCACTGCGGTGTACAAAGTGTGCTATGAGGGCCAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CAA 72 bp | ACTGTGTCCACCTCTTGTACCACAGTGATGCGAAAGTaGGGTGTCTGCATCAGGTCCTTCAGGAGCTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: TVSTSCTTVMRK*GVCIRSFRSCP Trigger: GGGACAGCTCCTGAAGGACCTGATGCAGACACCCAACTTTCGCATCACTGTGGTACAAGAGGTGGACACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS TCA 72 bp | CACAGATCTCCACTGTGTCCACCTCTTGTACCACAGTaGTGCGAAAGTTGGGTGTCTGCATCAGGTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: HRSPLCPPLVPQ*CESWVSASGPS Trigger: TGAAGGACCTGATGCAGACACCCAACTTTCGCATCACTGTGGTACAAGAGGTGGACACAGTGGAGATCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CAA 90 bp | TTGGGGCCCTCGTCTACCCCCTTAATAAGAGATATGCCAATAGTATaGGCCTTCAAGTGGCCCTTGAGCTGGTCACAGATCTTGCCAATG | + |
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Preference number: 6 (lower is better) Translates to: LGPSSTPLIRDMPIV*AFKWPLSWSQILPM Trigger: CATTGGCAAGATCTGTGACCAGCTCAAGGGCCACTTGAAGGCCAATACTATTGGCATATCTCTTATTAAGGGGGTAGACGAGGGCCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CAA 90 bp | CACTATATTCTTCAAGGCCCCACAGATCTCCACTGTGTCCACCTCTaGTACCACAGTGATGCGAAAGTTGGGTGTCTGCATCAGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: HYILQGPTDLHCVHL*YHSDAKVGCLHQVL Trigger: AAGGACCTGATGCAGACACCCAACTTTCGCATCACTGTGGTACAAGAGGTGGACACAGTGGAGATCTGTGGGGCCTTGAAGAATATAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS TCA 72 bp | AGCTTGTGCCCTGGCAGGTATTTAACATTCTCGTGCTaGGTGTTGATGATCTCAGTTAGCTTTCTGCCCCCG | + |
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Preference number: 6 (lower is better) Translates to: SLCPGRYLTFSC*VLMISVSFLPP Trigger: CGGGGGCAGAAAGCTAACTGAGATCATCAACACTCAGCACGAGAATGTTAAATACCTGCCAGGGCACAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023760.13 ENSMUST00000162194.2 |
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| CDS CAA 72 bp | AGAGATATGCCAATAGTATTGGCCTTCAAGTGGCCCTaGAGCTGGTCACAGATCTTGCCAATGAACACATTG | + |
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Preference number: 6 (lower is better) Translates to: RDMPIVLAFKWP*SWSQILPMNTL Trigger: CAATGTGTTCATTGGCAAGATCTGTGACCAGCTCAAGGGCCACTTGAAGGCCAATACTATTGGCATATCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162194.2 |
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