Pregenerated sensors for GPCPD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027346Ensembl transcript IDs: ENSMUST00000028822.14, ENSMUST00000060955.12, ENSMUST00000110136.8, ENSMUST00000110142.8, ENSMUST00000124632.2, ENSMUST00000145694.8, ENSMUST00000148833.8, ENSMUST00000149854.8
Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTAGCTACTACTCCAGTGCCATGCCTGCCTGCTGCCACACCCCCATaGTGGGCATGGGCTCACCGTCTGGAACTGCCAACTGTCACCTTG | + |
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Preference number: 1 (lower is better) Translates to: LATTPVPCLPAATPP*WAWAHRLELPTVTL Trigger: CAAGGTGACAGTTGGCAGTTCCAGACGGTGAGCCCATGCCCATCATGGGGGTGTGGCAGCAGGCAGGCATGGCACTGGAGTAGTAGCTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| 3UTR TCA 90 bp | ATTAGGAGATATGTATGGCCTTGTATGCCACAAGGCAGTAAACTTTaGGGTTTCAAAAGTCCACACCAGGGCCTGTCTGTCTGTCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: IRRYVWPCMPQGSKL*GFKSPHQGLSVCLS Trigger: AGACAGACAGACAGACAGGCCCTGGTGTGGACTTTTGAAACCTCAAAGTTTACTGCCTTGTGGCATACAAGGCCATACATATCTCCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| 3UTR TCA 90 bp | AATACATGCACAAACTGCCTCAGCAGGAGCACTGAGAAAGTGTGGTaGGTCGGCCCATACAAGCAGAATAAAATTTCTATTTGTAAGACA | + |
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Preference number: 1 (lower is better) Translates to: NTCTNCLSRSTEKVW*VGPYKQNKISICKT Trigger: TGTCTTACAAATAGAAATTTTATTCTGCTTGTATGGGCCGACTCACCACACTTTCTCAGTGCTCCTGCTGAGGCAGTTTGTGCATGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR TCA 90 bp | AATTATTCTCTGAAGCAAAAAGAAATAGCCCATGGAGGGATGTTCTaGAAGGAAAGATCTCAGAGGAAAATGGGAGTGAGAGGTGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: NYSLKQKEIAHGGMF*KERSQRKMGVRGER Trigger: TCTTTCACCTCTCACTCCCATTTTCCTCTGAGATCTTTCCTTTCAGAACATCCCTCCATGGGCTATTTCTTTTTGCTTCAGAGAATAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| 3UTR CCA 90 bp | TTCAGTGTACAGGAATTATTCTCTGAAGCAAAAAGAAATAGCCCATaGAGGGATGTTCTGAAAGGAAAGATCTCAGAGGAAAATGGGAGT | + |
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Preference number: 1 (lower is better) Translates to: FSVQELFSEAKRNSP*RDVLKGKISEENGS Trigger: ACTCCCATTTTCCTCTGAGATCTTTCCTTTCAGAACATCCCTCCATGGGCTATTTCTTTTTGCTTCAGAGAATAATTCCTGTACACTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| 3UTR-3UTR TCA 90 bp | TCATCTGCAGGCTGGCTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATCCTCAGCAGGAGCACTaGGAAAGTGTGGTGAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: SSAGWLGSGEKWQQSEVYPQQEH*ESVVSR Trigger: CCGACTCACCACACTTTCTCAGTGCTCCTGCTGAGG...ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | CCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCAAAGCCAGCTGGCTTACAGCTGGCTTACACAGTaGGTTCCAGGACAGCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: PLRRQRQMYLRVQSQLAYSWLTQ*VPGQPR Trigger: CCTTGGCTGTCCTGGAACTCACTGTGTAAGCCAGCT...GTAAGCCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR CAA 90 bp | ACACCAGGGCCTGTCTGTCTGTCTGTCTGTCTCTCTGCTTCCTGCTaGTGGATCAGAAGTAAGCTGTTAGCTACTACTCCAGTGCCATGC | + |
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Preference number: 2 (lower is better) Translates to: TPGPVCLSVCLSASC*WIRSKLLATTPVPC Trigger: GCATGGCACTGGAGTAGTAGCTAACAGCTTACTTCTGATCCACAAGCAGGAAGCAGAGAGACAGACAGACAGACAGACAGGCCCTGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| 3UTR-3UTR TCA 90 bp | TCGATGGTGAAAACTAAACATGAGGGCAGCGGTGTGCCCCTAAATGTCCTCTGTCCCACATTCTGGCTGTaGGTGCCTGCACTTGAACTC | + |
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Preference number: 2 (lower is better) Translates to: SMVKTKHEGSGVPLNVLCPTFWL*VPALEL Trigger: GAGTTCAAGTGCAGGCACTCACAGCCAGAATGTGGG...ACAGAGGACATTTAGGGGCACACCGCTGCCCTCATGTTTAGTTTTCACCATCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGAGGCATGCTGTGCCCACGTGTCCAGGAAGAACATCACCCTGAACTACATAGCAGTGCTCGATGGTaGAAACTAAACATGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TGGMLCPRVQEEHHPELHSSARW*KLNMRA Trigger: TGCCCTCATGTTTAGTTTTCACCATCGAGCACTGCT...ATGTAGTTCAGGGTGATGTTCTTCCTGGACACGTGGGCACAGCATGCCTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCGCATGACTTTAATACCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCCTCAGCAGGAGCACTaGGAAAGTGTGGTGAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: WRMTLIPLRRQRQMYLRVPQQEH*ESVVSR Trigger: CCGACTCACCACACTTTCTCAGTGCTCCTGCTGAGG...AACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGGTATTAAAGTCATGCGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | CCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCAAAGCCAGCTGGCTTACAGCAGTGCTCGATGGTaGAAACTAAACATGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: PLRRQRQMYLRVQSQLAYSSARW*KLNMRA Trigger: TGCCCTCATGTTTAGTTTTCACCATCGAGCACTGCT...GTAAGCCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTGGATCAGAAGTAAGCTGTTAGCTACTACTCCAGTGCCATGCCTGCCTGCTACTGCAGAAAAGTTTTaGCAGCAGGTGTGGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LWIRSKLLATTPVPCLPATAEKF*QQVWER Trigger: CCTTTCCCACACCTGCTGTCAAAACTTTTCTGCAGT...AGCAGGCAGGCATGGCACTGGAGTAGTAGCTAACAGCTTACTTCTGATCCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| 3UTR-3UTR TCA 90 bp | ATCTTTGAATGGTTTATGAGACAAGTTTTGAGGTTCATCTGCAGGCTGGCTTGGCCTCAGCAGGAGCACTaGGAAAGTGTGGTGAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: IFEWFMRQVLRFICRLAWPQQEH*ESVVSR Trigger: CCGACTCACCACACTTTCTCAGTGCTCCTGCTGAGG...CCAAGCCAGCCTGCAGATGAACCTCAAAACTTGTCTCATAAACCATTCAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGCAGCAGGTGAGGTCATaGTACACCACGGGCACAAAG | + |
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Preference number: 2 (lower is better) Translates to: HYCFIGLKNLRGNSSARWQQVRS*YTTGTK Trigger: CTTTGTGCCCGTGGTGTATCATGACCTCACCTGCTG...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR CCA 90 bp | TCATCTGCAGGCTGGCTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATCACTATCAATGCCGTTaGCATCCACGTGGATATCAG | + |
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Preference number: 2 (lower is better) Translates to: SSAGWLGSGEKWQQSEVYHYQCR*HPRGYQ Trigger: CTGATATCCACGTGGATGCCAACGGCATTGATAGTG...ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGGGAAATGTCCTGAGTTGGATACATAAAGTACTGTTAATGCATAAAGATGCCATGCCTGCCTGCTaGCACACCCCCATGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: SQGNVLSWIHKVLLMHKDAMPAC*HTPMMG Trigger: GCCCATCATGGGGGTGTGGCAGCAGGCAGGCATGGC...ATCTTTATGCATTAACAGTACTTTATGTATCCAACTCAGGACATTTCCCTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| 3UTR-3UTR GCA 90 bp | TCATCTGCAGGCTGGCTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTTCTGTCAATACATaGACAAACTGCCTCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SSAGWLGSGEKWQQSEVYTSVNT*TNCLSR Trigger: CCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGT...ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR GCA 90 bp | TCATCTGCAGGCTGGCTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATCTGTGCAAAACTCATTaGAATGGGTGTTGTCCGAGA | + |
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Preference number: 2 (lower is better) Translates to: SSAGWLGSGEKWQQSEVYLCKTH*NGCCPR Trigger: TCTCGGACAACACCCATTGCAATGAGTTTTGCACAG...ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGTATTTTCCTGTACTTTAGCTAGCTTGGCAGTCGTTGTTGAGTTCCCTGCAACAGGAGGCATGCTGTaGCCACGTGTCCAGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: IVFSCTLASLAVVVEFPATGGML*PRVQEE Trigger: TTCTTCCTGGACACGTGGGCACAGCATGCCTCCTGT...TGCAGGGAACTCAACAACGACTGCCAAGCTAGCTAAAGTACAGGAAAATACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCAAAGCCAGCTGGCTTACAGATACCTATGTACATaGATGACACAGACCTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: PLRRQRQMYLRVQSQLAYRYLCT*MTQTCA Trigger: TGCACAGGTCTGTGTCATCCATGTACATAGGTATCT...GTAAGCCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCAGCTGGCTTACACAGTaGGTTCCAGGACAGCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSSWLTQ*VPGQPR Trigger: CCTTGGCTGTCCTGGAACTCACTGTGTAAGCCAGCT...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGAGAGGCAGATGTATCTaGGAGTTCAAAGCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: HYCFIGLKNLRGNSSARWRGRCI*EFKASW Trigger: CCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCT...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTCCCACATTCTGGCTGTaGGTGCCTGCACTTGAACTC | + |
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Preference number: 2 (lower is better) Translates to: LGQVRNGSNLRFILKENGPTFWL*VPALEL Trigger: GAGTTCAAGTGCAGGCACTCACAGCCAGAATGTGGG...ACCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCGCATGACTTTAATACCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTGGAAGAACATCACCCTaGACTACATGCTCACTGAGA | + |
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Preference number: 2 (lower is better) Translates to: WRMTLIPLRRQRQMYLRVGRTSP*TTCSLR Trigger: TCTCAGTGAGCATGTAGTTCAGGGTGATGTTCTTCC...AACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGGTATTAAAGTCATGCGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCCAGCAGGTGAGGTCATaGTACACCACGGGCACAAAG | + |
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Preference number: 2 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSQQVRS*YTTGTK Trigger: CTTTGTGCCCGTGGTGTATCATGACCTCACCTGCTG...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCAAAGAGGCCAGGAAGGAAAAGACACATGGTATAAAGTTACATACATGTATACTACTCCAGTGCCATaGCTGCCTGCTGCCACACCC | + |
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Preference number: 2 (lower is better) Translates to: VQRGQEGKDTWYKVTYMYTTPVP*LPAATP Trigger: GGGTGTGGCAGCAGGCAGGCATGGCACTGGAGTAGT...ATACATGTATGTAACTTTATACCATGTGTCTTTTCCTTCCTGGCCTCTTTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| 3UTR-3UTR GCA 90 bp | CCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCAAAGCCAGCTGGCTTACACTAAAGGAAAATGGTaGGTGTTCCTATCAACCATG | + |
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Preference number: 2 (lower is better) Translates to: PLRRQRQMYLRVQSQLAYTKGKW*VFLSTM Trigger: CATGGTTGATAGGAACACGCACCATTTTCCTTTAGT...GTAAGCCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR CCA 90 bp | TCATCTGCAGGCTGGCTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATAGATACCTATGTACATaGATGACACAGACCTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SSAGWLGSGEKWQQSEVYRYLCT*MTQTCA Trigger: TGCACAGGTCTGTGTCATCCATGTACATAGGTATCT...ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTTTGAATGGTTTATGAGACAAGTTTTGAGGTTCATCTGCAGGCTGGCTTGGAGAGGCAGATGTATCTaGGAGTTCAAAGCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: IFEWFMRQVLRFICRLAWRGRCI*EFKASW Trigger: CCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCT...CCAAGCCAGCCTGCAGATGAACCTCAAAACTTGTCTCATAAACCATTCAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGGGAAGAACATCACCCTaGACTACATGCTCACTGAGA | + |
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Preference number: 2 (lower is better) Translates to: HYCFIGLKNLRGNSSARWGRTSP*TTCSLR Trigger: TCTCAGTGAGCATGTAGTTCAGGGTGATGTTCTTCC...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR GCA 90 bp | TCATCTGCAGGCTGGCTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTaGGTGTTCCTATCAACCATG | + |
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Preference number: 2 (lower is better) Translates to: SSAGWLGSGEKWQQSEVYTKGKW*VFLSTM Trigger: CATGGTTGATAGGAACACGCACCATTTTCCTTTAGT...ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCGCATGACTTTAATACCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTACTTCTGTCAATACATaGACAAACTGCCTCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: WRMTLIPLRRQRQMYLRVTSVNT*TNCLSR Trigger: CCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGT...AACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGGTATTAAAGTCATGCGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGTATTTTCCTGTACTTTAGCTAGCTTGGCAGTCGTTGTTGAGTTCCCTGCAAGCAGTGCTCGATGGTaGAAACTAAACATGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: IVFSCTLASLAVVVEFPASSARW*KLNMRA Trigger: TGCCCTCATGTTTAGTTTTCACCATCGAGCACTGCT...TGCAGGGAACTCAACAACGACTGCCAAGCTAGCTAAAGTACAGGAAAATACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | TCATCTGCAGGCTGGCTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATTGCATTGAGTCAAATTaGTACCTTCTGATCTACACT | + |
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Preference number: 2 (lower is better) Translates to: SSAGWLGSGEKWQQSEVYCIESN*YLLIYT Trigger: AGTGTAGATCAGAAGGTATCAATTTGACTCAATGCA...ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | TCGATGGTGAAAACTAAACATGAGGGCAGCGGTGTGCCCCTAAATGTCCTCTGTTGCATTGAGTCAAATTaGTACCTTCTGATCTACACT | + |
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Preference number: 2 (lower is better) Translates to: SMVKTKHEGSGVPLNVLCCIESN*YLLIYT Trigger: AGTGTAGATCAGAAGGTATCAATTTGACTCAATGCA...ACAGAGGACATTTAGGGGCACACCGCTGCCCTCATGTTTAGTTTTCACCATCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTAGAGGCAGATGTATCTaGGAGTTCAAAGCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LGQVRNGSNLRFILKENGRGRCI*EFKASW Trigger: CCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCT...ACCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR GCA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGATCAAATTCTACAAATaGTGCGCCATGACTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: HYCFIGLKNLRGNSSARWIKFYK*CAMTGS Trigger: GCTGCCAGTCATGGCGCAGCATTTGTAGAATTTGAT...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR CCA 90 bp | AATAGCCCATGGAGGGATGTTCTGAAAGGAAAGATCTCAGAGGAAAATGGGAGTATCACTGAGAGAGTATaGTCCCCAGTTGGTAGACTA | + |
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Preference number: 2 (lower is better) Translates to: NSPWRDVLKGKISEENGSITERV*SPVGRL Trigger: TAGTCTACCAACTGGGGACCATACTCTCTCAGTGAT...ACTCCCATTTTCCTCTGAGATCTTTCCTTTCAGAACATCCCTCCATGGGCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| 3UTR-3UTR CCA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGGGGTCAGGTGAGAAATaGCAGCAATCTGAGGTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: HYCFIGLKNLRGNSSARWGSGEK*QQSEVY Trigger: ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCC...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCAAAGCCAGCTGGCTTACTACCCTGCAGCATTCTaGAACTTTAATATCTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: PLRRQRQMYLRVQSQLAYYPAAF*NFNIFE Trigger: TTCAAAGATATTAAAGTTCCAGAATGCTGCAGGGTA...GTAAGCCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR TCA 90 bp | AATAGCCCATGGAGGGATGTTCTGAAAGGAAAGATCTCAGAGGAAAATGGGAGTGTCAGGGAAATGTCCTaGGTTGGATACATAAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: NSPWRDVLKGKISEENGSVREMS*VGYIKY Trigger: GTACTTTATGTATCCAACTCAGGACATTTCCCTGAC...ACTCCCATTTTCCTCTGAGATCTTTCCTTTCAGAACATCCCTCCATGGGCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCAGCAGTGCTCGATGGTaGAAACTAAACATGAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSSSARW*KLNMRA Trigger: TGCCCTCATGTTTAGTTTTCACCATCGAGCACTGCT...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACGGAAGAACATCACCCTaGACTACATGCTCACTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SYVFNFCQYMHKLPQQEHGRTSP*TTCSLR Trigger: TCTCAGTGAGCATGTAGTTCAGGGTGATGTTCTTCC...GTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGTTCCAGGACAGCCAAGGCTACACAGGTTGTGTCAAAAATTGAAAGAAAAACAAATGCTGCGCCATaGCTGGCAGCATTTCTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: VSSRTAKATQVVSKIERKTNAAP*LAAFLK Trigger: TTTAAGAAATGCTGCCAGTCATGGCGCAGCATTTGT...TTTTCTTTCAATTTTTGACACAACCTGTGTAGCCTTGGCTGTCCTGGAACTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCTTTGAATGGTTTATGAGACAAGTTTTGAGGTTCATCTGCAGGCTGGCTTGGACTTCTGTCAATACATaGACAAACTGCCTCAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: IFEWFMRQVLRFICRLAWTSVNT*TNCLSR Trigger: CCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGT...CCAAGCCAGCCTGCAGATGAACCTCAAAACTTGTCTCATAAACCATTCAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGTTCCAGGACAGCCAAGGCTACACAGGTTGTGTCAAAAATTGAAAGAAAAGGGTCAGGTGAGAAATaGCAGCAATCTGAGGTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: VSSRTAKATQVVSKIERKGSGEK*QQSEVY Trigger: ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCC...TTTTCTTTCAATTTTTGACACAACCTGTGTAGCCTTGGCTGTCCTGGAACTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | TCATCTGCAGGCTGGCTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATTACCCTGCAGCATTCTaGAACTTTAATATCTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SSAGWLGSGEKWQQSEVYYPAAF*NFNIFE Trigger: TTCAAAGATATTAAAGTTCCAGAATGCTGCAGGGTA...ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCCCTTAAAGCAGGTCTGGTCAAAACACTGCTTCCATCAAGTCAATGTTTTCATGGAGGGATGTTCTaGAAGGAAAGATCTCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FSLKAGLVKTLLPSSQCFHGGMF*KERSQR Trigger: CCTCTGAGATCTTTCCTTTCAGAACATCCCTCCATG...AAAACATTGACTTGATGGAAGCAGTGTTTTGACCAGACCTGCTTTAAGGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR-3UTR TCA 90 bp | ATTATACCTGGACAAGTGACAAATAGCATACTTGATATTCTTGCGGGACCTGTAAGCAGTGCTCGATGGTaGAAACTAAACATGAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: IIPGQVTNSILDILAGPVSSARW*KLNMRA Trigger: TGCCCTCATGTTTAGTTTTCACCATCGAGCACTGCT...TACAGGTCCCGCAAGAATATCAAGTATGCTATTTGTCACTTGTCCAGGTATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGCGCATGACTTTAATACCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTTGCATTGAGTCAAATTaGTACCTTCTGATCTACACT | + |
|
Preference number: 2 (lower is better) Translates to: WRMTLIPLRRQRQMYLRVCIESN*YLLIYT Trigger: AGTGTAGATCAGAAGGTATCAATTTGACTCAATGCA...AACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGGTATTAAAGTCATGCGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACTTCTGTCAATACATaGACAAACTGCCTCAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSTSVNT*TNCLSR Trigger: CCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGT...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCCTGTGCAAAACTCATTaGAATGGGTGTTGTCCGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSLCKTH*NGCCPR Trigger: TCTCGGACAACACCCATTGCAATGAGTTTTGCACAG...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCATCAAATTCTACAAATaGTGCGCCATGACTGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSIKFYK*CAMTGS Trigger: GCTGCCAGTCATGGCGCAGCATTTGTAGAATTTGAT...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCTTTGAATGGTTTATGAGACAAGTTTTGAGGTTCATCTGCAGGCTGGCTTGGTTCAGGCGCTCCAACTaGTCCACTTGGAATATATTT | + |
|
Preference number: 2 (lower is better) Translates to: IFEWFMRQVLRFICRLAWFRRSN*STWNIF Trigger: AAATATATTCCAAGTGGAGCAGTTGGAGCGCCTGAA...CCAAGCCAGCCTGCAGATGAACCTCAAAACTTGTCTCATAAACCATTCAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTTTGAATGGTTTATGAGACAAGTTTTGAGGTTCATCTGCAGGCTGGCTTGGAGATACCTATGTACATaGATGACACAGACCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: IFEWFMRQVLRFICRLAWRYLCT*MTQTCA Trigger: TGCACAGGTCTGTGTCATCCATGTACATAGGTATCT...CCAAGCCAGCCTGCAGATGAACCTCAAAACTTGTCTCATAAACCATTCAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACGGGTCAGGTGAGAAATaGCAGCAATCTGAGGTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: SYVFNFCQYMHKLPQQEHGSGEK*QQSEVY Trigger: ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCC...GTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTGGGTCAGGTGAGAAATaGCAGCAATCTGAGGTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: LGQVRNGSNLRFILKENGGSGEK*QQSEVY Trigger: ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCC...ACCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGCACTTGGAATATATTTaGCTGTTCAGGCATCCAATC | + |
|
Preference number: 2 (lower is better) Translates to: HYCFIGLKNLRGNSSARWHLEYI*LFRHPI Trigger: GATTGGATGCCTGAACAGCCAAATATATTCCAAGTG...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCAAAGAGGCCAGGAAGGAAAAGACACATGGTATAAAGTTACATACATGTATAGAGGAAAATGGGAGTaGGAGGTGAAAGACACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VQRGQEGKDTWYKVTYMYRGKWE*EVKDTA Trigger: AGCAGTGTCTTTCACCTCTCACTCCCATTTTCCTCT...ATACATGTATGTAACTTTATACCATGTGTCTTTTCCTTCCTGGCCTCTTTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR-3UTR TCA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGTGCATTGAGTCAAATTaGTACCTTCTGATCTACACT | + |
|
Preference number: 2 (lower is better) Translates to: HYCFIGLKNLRGNSSARWCIESN*YLLIYT Trigger: AGTGTAGATCAGAAGGTATCAATTTGACTCAATGCA...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGAGTTCCAGGACAGCCAAGGCTACACAGGTTGTGTCAAAAATTGAAAGAAAAACTAAAGGAAAATGGTaGGTGTTCCTATCAACCATG | + |
|
Preference number: 2 (lower is better) Translates to: VSSRTAKATQVVSKIERKTKGKW*VFLSTM Trigger: CATGGTTGATAGGAACACGCACCATTTTCCTTTAGT...TTTTCTTTCAATTTTTGACACAACCTGTGTAGCCTTGGCTGTCCTGGAACTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCTCAAGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCATTCTGGCTGTGAGTaGCTGCACTTGAACTCATTG | + |
|
Preference number: 2 (lower is better) Translates to: HLKSYVFNFCQYMHKLPQHSGCE*LHLNSL Trigger: CAATGAGTTCAAGTGCAGGCACTCACAGCCAGAATG...CTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACTTGAGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGTATACTAAAGGAAAATaGTGCGTGTTCCTATCAACC | + |
|
Preference number: 2 (lower is better) Translates to: HYCFIGLKNLRGNSSARWYTKGK*CVFLST Trigger: GGTTGATAGGAACACGCACCATTTTCCTTTAGTATA...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGAGGAGCAGTGCTCGATGGTaGAAACTAAACATGAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: AAFWNFNIFEWFMRQVLRSSARW*KLNMRA Trigger: TGCCCTCATGTTTAGTTTTCACCATCGAGCACTGCT...CCTCAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGTTCCAGGACAGCCAAGGCTACACAGGTTGTGTCAAAAATTGAAAGAAAACCAATACTTGGAAAATaGAGACTGCATAGAACAACT | + |
|
Preference number: 2 (lower is better) Translates to: VSSRTAKATQVVSKIERKPILGK*RLHRTT Trigger: AGTTGTTCTATGCAGTCTTCATTTTCCAAGTATTGG...TTTTCTTTCAATTTTTGACACAACCTGTGTAGCCTTGGCTGTCCTGGAACTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR GCA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGTATTTGTTCTGCTTCTaGCGAACCATTGTACAAATA | + |
|
Preference number: 2 (lower is better) Translates to: HYCFIGLKNLRGNSSARWYLFCF*RTIVQI Trigger: TATTTGTACAATGGTTCGGCAGAAGCAGAACAAATA...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCTCAAGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCTGTGCAAAACTCATTaGAATGGGTGTTGTCCGAGA | + |
|
Preference number: 2 (lower is better) Translates to: HLKSYVFNFCQYMHKLPQLCKTH*NGCCPR Trigger: TCTCGGACAACACCCATTGCAATGAGTTTTGCACAG...CTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACTTGAGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR GCA 90 bp | GAACAACTATATCCAGGTAATGGCTTGATGATGATAAAATCAACTCTGACTTTGCATTCTGGCTGTGAGTaGCTGCACTTGAACTCATTG | + |
|
Preference number: 2 (lower is better) Translates to: EQLYPGNGLMMIKSTLTLHSGCE*LHLNSL Trigger: CAATGAGTTCAAGTGCAGGCACTCACAGCCAGAATG...CAAAGTCAGAGTTGATTTTATCATCATCAAGCCATTACCTGGATATAGTTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTTCCAACTGCTCCACTTaGAATATATTTGGCTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LGQVRNGSNLRFILKENGSNCST*NIFGCS Trigger: TGAACAGCCAAATATATTCCAAGTGGAGCAGTTGGA...ACCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACTCCAACTGCTCCACTTaGAATATATTTGGCTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SYVFNFCQYMHKLPQQEHSNCST*NIFGCS Trigger: TGAACAGCCAAATATATTCCAAGTGGAGCAGTTGGA...GTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTCCAATACTTGGAAAATaGAGACTGCATAGAACAACT | + |
|
Preference number: 2 (lower is better) Translates to: LGQVRNGSNLRFILKENGPILGK*RLHRTT Trigger: AGTTGTTCTATGCAGTCTTCATTTTCCAAGTATTGG...ACCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGAGTTCCAGGACAGCCAAGGCTACACAGGTTGTGTCAAAAATTGAAAGAAAATATTTGTTCTGCTTCTaGCGAACCATTGTACAAATA | + |
|
Preference number: 2 (lower is better) Translates to: VSSRTAKATQVVSKIERKYLFCF*RTIVQI Trigger: TATTTGTACAATGGTTCGGCAGAAGCAGAACAAATA...TTTTCTTTCAATTTTTGACACAACCTGTGTAGCCTTGGCTGTCCTGGAACTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCTCAAGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGAGATACCTATGTACATaGATGACACAGACCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: HLKSYVFNFCQYMHKLPQRYLCT*MTQTCA Trigger: TGCACAGGTCTGTGTCATCCATGTACATAGGTATCT...CTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACTTGAGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACTATACTAAAGGAAAATaGTGCGTGTTCCTATCAACC | + |
|
Preference number: 2 (lower is better) Translates to: SYVFNFCQYMHKLPQQEHYTKGK*CVFLST Trigger: GGTTGATAGGAACACGCACCATTTTCCTTTAGTATA...GTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCTATACTAAAGGAAAATaGTGCGTGTTCCTATCAACC | + |
|
Preference number: 2 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSYTKGK*CVFLST Trigger: GGTTGATAGGAACACGCACCATTTTCCTTTAGTATA...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGTTCCAGGACAGCCAAGGCTACACAGGTTGTGTCAAAAATTGAAAGAAAATACCCTGCAGCATTCTaGAACTTTAATATCTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: VSSRTAKATQVVSKIERKYPAAF*NFNIFE Trigger: TTCAAAGATATTAAAGTTCCAGAATGCTGCAGGGTA...TTTTCTTTCAATTTTTGACACAACCTGTGTAGCCTTGGCTGTCCTGGAACTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTATACCTGGACAAGTGACAAATAGCATACTTGATATTCTTGCGGGACCTGTATTTTGTGAAGAACAGTaGGAGAGACCTTATCGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: IIPGQVTNSILDILAGPVFCEEQ*ERPYRH Trigger: ATGACGATAAGGTCTCTCCCACTGTTCTTCACAAAA...TACAGGTCCCGCAAGAATATCAAGTATGCTATTTGTCACTTGTCCAGGTATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTTTGAATGGTTTATGAGACAAGTTTTGAGGTTCATCTGCAGGCTGGCTTGGATTGTTTCCGGTCTTTaGTTTTTAATGCAGTCACAT | + |
|
Preference number: 2 (lower is better) Translates to: IFEWFMRQVLRFICRLAWIVSGL*FLMQSH Trigger: ATGTGACTGCATTAAAAACCAAAGACCGGAAACAAT...CCAAGCCAGCCTGCAGATGAACCTCAAAACTTGTCTCATAAACCATTCAAAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTGTACAGGAATTATTCTCTGAAGCAAAAAGAAATAGCCCATGGAGGGATGTTTTCTTAAGTGACTTTTaGCATATCTCAACATCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SVQELFSEAKRNSPWRDVFLSDF*HISTSG Trigger: CCCAGATGTTGAGATATGTCAAAAGTCACTTAAGAA...AACATCCCTCCATGGGCTATTTCTTTTTGCTTCAGAGAATAATTCCTGTACACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAGGGAAATGTCCTGAGTTGGATACATAAAGTACTGTTAATGCATAAAGATATTAGGAGATATGTATaGCCTTGTATGCCACAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SQGNVLSWIHKVLLMHKDIRRYV*PCMPQG Trigger: GCCTTGTGGCATACAAGGCCATACATATCTCCTAAT...ATCTTTATGCATTAACAGTACTTTATGTATCCAACTCAGGACATTTCCCTGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCTCATTATTGCTTCATTaGACTGAAAAACCTAAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSSLLLH*TEKPKR Trigger: CCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATGA...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACTCATTATTGCTTCATTaGACTGAAAAACCTAAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SYVFNFCQYMHKLPQQEHSLLLH*TEKPKR Trigger: CCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATGA...GTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTTACCCTGCAGCATTCTaGAACTTTAATATCTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LGQVRNGSNLRFILKENGYPAAF*NFNIFE Trigger: TTCAAAGATATTAAAGTTCCAGAATGCTGCAGGGTA...ACCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCAAAGAGGCCAGGAAGGAAAAGACACATGGTATAAAGTTACATACATGTATTTAGGGCTTCTTAAGTaGCTTTTGACATATCTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: VQRGQEGKDTWYKVTYMYLGLLK*LLTYLN Trigger: GTTGAGATATGTCAAAAGTCACTTAAGAAGCCCTAA...ATACATGTATGTAACTTTATACCATGTGTCTTTTCCTTCCTGGCCTCTTTGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGAGGAGGTCTTCAGTATaGGCATTTATCCCCAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLRRSSV*AFIPKI Trigger: TATTTTGGGGATAAATGCCCATACTGAAGACCTCCT...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGCCAATACTTGGAAAATaGAGACTGCATAGAACAACT | + |
|
Preference number: 2 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLPILGK*RLHRTT Trigger: AGTTGTTCTATGCAGTCTTCATTTTCCAAGTATTGG...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCAAAGAGGCCAGGAAGGAAAAGACACATGGTATAAAGTTACATACATGTATGGAAATGTCCTGAGTTaGATACATAAAGTACTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: VQRGQEGKDTWYKVTYMYGNVLS*IHKVLL Trigger: TAACAGTACTTTATGTATCCAACTCAGGACATTTCC...ATACATGTATGTAACTTTATACCATGTGTCTTTTCCTTCCTGGCCTCTTTGAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGAGGTATTTGTTCTGCTTCTaGCGAACCATTGTACAAATA | + |
|
Preference number: 2 (lower is better) Translates to: AAFWNFNIFEWFMRQVLRYLFCF*RTIVQI Trigger: TATTTGTACAATGGTTCGGCAGAAGCAGAACAAATA...CCTCAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR TCA 72 bp | ACTCCAGTGCCATGCCTGCCTGCTGCCACACCCCCATaGTGGGCATGGGCTCACCGTCTGGAACTGCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: TPVPCLPAATPP*WAWAHRLELPT Trigger: AGTTGGCAGTTCCAGACGGTGAGCCCATGCCCATCATGGGGGTGTGGCAGCAGGCAGGCATGGCACTGGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| 3UTR-3UTR CAA 90 bp | CCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCAAAGCCAGCTGGCTTACCATCTGCAGGCTGGCTaGGGTCAGGTGAGAAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: PLRRQRQMYLRVQSQLAYHLQAG*GQVRNG Trigger: GCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATG...GTAAGCCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR TCA 72 bp | GGCAGCGGTGTGCCCCTAAATGTCCTCTGTGCACTGTaGACTAAGCGTTCTCCACACTATCAATGCCGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GSGVPLNVLCAL*TKRSPHYQCRW Trigger: CCAACGGCATTGATAGTGTGGAGAACGCTTAGTTCACAGTGCACAGAGGACATTTAGGGGCACACCGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCAAAGCCAGCTGGCTTACGCTTGGCAGTCGTTGTaGAGTTCCCTGCACCACGAT | + |
|
Preference number: 3 (lower is better) Translates to: PLRRQRQMYLRVQSQLAYAWQSL*SSLHHD Trigger: ATCGTGGTGCAGGGAACTCAACAACGACTGCCAAGC...GTAAGCCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR CAA 90 bp | TCGATGGTGAAAACTAAACATGAGGGCAGCGGTGTGCCCCTAAATGTCCTCTGTCTAGCTTGGCAGTCGTaGTTGAGTTCCCTGCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: SMVKTKHEGSGVPLNVLCLAWQS*LSSLHH Trigger: GTGGTGCAGGGAACTCAACAACGACTGCCAAGCTAG...ACAGAGGACATTTAGGGGCACACCGCTGCCCTCATGTTTAGTTTTCACCATCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR CAA 90 bp | TGGCGCATGACTTTAATACCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCATCTGCAGGCTGGCTaGGGTCAGGTGAGAAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: WRMTLIPLRRQRQMYLRVHLQAG*GQVRNG Trigger: GCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATG...AACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGGTATTAAAGTCATGCGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR CAA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGCATCTGCAGGCTGGCTaGGGTCAGGTGAGAAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: HYCFIGLKNLRGNSSARWHLQAG*GQVRNG Trigger: GCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATG...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCGCATGACTTTAATACCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTGCTTGGCAGTCGTTGTaGAGTTCCCTGCACCACGAT | + |
|
Preference number: 3 (lower is better) Translates to: WRMTLIPLRRQRQMYLRVAWQSL*SSLHHD Trigger: ATCGTGGTGCAGGGAACTCAACAACGACTGCCAAGC...AACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGGTATTAAAGTCATGCGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCAAAGCCAGCTGGCTTACACACTATCAATGCCGTaGGCATCCACGTGGATATCA | + |
|
Preference number: 3 (lower is better) Translates to: PLRRQRQMYLRVQSQLAYTLSMP*ASTWIS Trigger: TGATATCCACGTGGATGCCAACGGCATTGATAGTGT...GTAAGCCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR TCA 72 bp | TGTCAATACATGCACAAACTGCCTCAGCAGGAGCACTaGGAAAGTGTGGTGAGTCGGCCCATACAAGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: CQYMHKLPQQEH*ESVVSRPIQAE Trigger: TTCTGCTTGTATGGGCCGACTCACCACACTTTCTCAGTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR CCA 72 bp | GTCTGTCTGTCTGTCTGTCTCTCTGCTTCCTGCTTGTaGATCAGAAGTAAGCTGTTAGCTACTACTCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VCLSVCLSASCL*IRSKLLATTPV Trigger: CACTGGAGTAGTAGCTAACAGCTTACTTCTGATCCACAAGCAGGAAGCAGAGAGACAGACAGACAGACAGAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| 3UTR-3UTR CAA 90 bp | CCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCAAAGCCAGCTGGCTTACCCAAGGCTACACAGGTaGTGTCAAAAATTGAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PLRRQRQMYLRVQSQLAYPRLHR*CQKLKE Trigger: TTCTTTCAATTTTTGACACAACCTGTGTAGCCTTGG...GTAAGCCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR CAA 90 bp | TGGCGCATGACTTTAATACCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTACTGTGCAAAACTCATaGCAATGGGTGTTGTCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: WRMTLIPLRRQRQMYLRVTVQNS*QWVLSE Trigger: CTCGGACAACACCCATTGCAATGAGTTTTGCACAGT...AACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGGTATTAAAGTCATGCGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR CAA 90 bp | TCGATGGTGAAAACTAAACATGAGGGCAGCGGTGTGCCCCTAAATGTCCTCTGTCCACTTGGAATATATTaGGCTGTTCAGGCATCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SMVKTKHEGSGVPLNVLCPLGIY*AVQASN Trigger: ATTGGATGCCTGAACAGCCAAATATATTCCAAGTGG...ACAGAGGACATTTAGGGGCACACCGCTGCCCTCATGTTTAGTTTTCACCATCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR GCA 72 bp | CTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTaGTCGATGGTGAAAACTAAACATGAGGGCAGCGGT | + |
|
Preference number: 3 (lower is better) Translates to: LHWTEKPKRQQQ*SMVKTKHEGSG Trigger: ACCGCTGCCCTCATGTTTAGTTTTCACCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR CAA 90 bp | TCATCTGCAGGCTGGCTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATAATAATATGGGATATTaGTTCTGCTTCTGCCGAACC | + |
|
Preference number: 3 (lower is better) Translates to: SSAGWLGSGEKWQQSEVYNNMGY*FCFCRT Trigger: GGTTCGGCAGAAGCAGAACAAATATCCCATATTATT...ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR-3UTR CAA 90 bp | CATCTCAAGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCTAGCTTGGCAGTCGTaGTTGAGTTCCCTGCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: HLKSYVFNFCQYMHKLPQLAWQS*LSSLHH Trigger: GTGGTGCAGGGAACTCAACAACGACTGCCAAGCTAG...CTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACTTGAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| 3UTR TCA 72 bp | ACAAACTGCCTCAGCAGGAGCACTGAGAAAGTGTGGTaGGTCGGCCCATACAAGCAGAATAAAATTTCTATT | + |
|
Preference number: 3 (lower is better) Translates to: TNCLSRSTEKVW*VGPYKQNKISI Trigger: AATAGAAATTTTATTCTGCTTGTATGGGCCGACTCACCACACTTTCTCAGTGCTCCTGCTGAGGCAGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR GCA 72 bp | AAATGTCCTGTCCTTGTGCAACCTACACTCTGTGTATaGATTAGGAAACAGGGAGGTACTAGTTCAAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KCPVLVQPTLCV*IRKQGGTSSKR Trigger: CCTCTTTGAACTAGTACCTCCCTGTTTCCTAATGCATACACAGAGTGTAGGTTGCACAAGGACAGGACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCCCTTAAAGCAGGTCTGGTCAAAACACTGCTTCCATCAAGTCAATGTTTTGAGTATGGTCCCCAGTaGGTAGACTATTTGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FSLKAGLVKTLLPSSQCFEYGPQ*VDYLGR Trigger: CCTTCCCAAATAGTCTACCAACTGGGGACCATACTC...AAAACATTGACTTGATGGAAGCAGTGTTTTGACCAGACCTGCTTTAAGGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR-3UTR CAA 90 bp | TGGCGCATGACTTTAATACCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCCAAGGCTACACAGGTaGTGTCAAAAATTGAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: WRMTLIPLRRQRQMYLRVPRLHR*CQKLKE Trigger: TTCTTTCAATTTTTGACACAACCTGTGTAGCCTTGG...AACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGGTATTAAAGTCATGCGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCGCATGACTTTAATACCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTTACTCCATCCCTGTGTaGGCAAATCCATTTTATTTC | + |
|
Preference number: 3 (lower is better) Translates to: WRMTLIPLRRQRQMYLRVYSIPV*ANPFYF Trigger: GAAATAAAATGGATTTGCCAACACAGGGATGGAGTA...AACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGGTATTAAAGTCATGCGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACACTGTGCAAAACTCATaGCAATGGGTGTTGTCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: SYVFNFCQYMHKLPQQEHTVQNS*QWVLSE Trigger: CTCGGACAACACCCATTGCAATGAGTTTTGCACAGT...GTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACACACTATCAATGCCGTaGGCATCCACGTGGATATCA | + |
|
Preference number: 3 (lower is better) Translates to: SYVFNFCQYMHKLPQQEHTLSMP*ASTWIS Trigger: TGATATCCACGTGGATGCCAACGGCATTGATAGTGT...GTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR TCA 72 bp | CAGGGGAACTACACATTTGGGTTAGGGCTTCTTAAGTaGCTTTTGACATATCTCAACATCTGGGACAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: QGNYTFGLGLLK*LLTYLNIWDKI Trigger: GATCTTGTCCCAGATGTTGAGATATGTCAAAAGTCACTTAAGAAGCCCTAACCCAAATGTGTAGTTCCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR TCA 72 bp | TGTTCTGAAAGGAAAGATCTCAGAGGAAAATGGGAGTaGGAGGTGAAAGACACTGCTATGGAAGATTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: CSERKDLRGKWE*EVKDTAMEDSR Trigger: CCTTGAATCTTCCATAGCAGTGTCTTTCACCTCTCACTCCCATTTTCCTCTGAGATCTTTCCTTTCAGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR-3UTR CAA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGAATAATATGGGATATTaGTTCTGCTTCTGCCGAACC | + |
|
Preference number: 3 (lower is better) Translates to: HYCFIGLKNLRGNSSARWNNMGY*FCFCRT Trigger: GGTTCGGCAGAAGCAGAACAAATATCCCATATTATT...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTACAGGAATTATTCTCTGAAGCAAAAAGAAATAGCCCATGGAGGGATGTTAACTGCAGAAAAGTTTaGACAGCAGGTGTGGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SVQELFSEAKRNSPWRDVNCRKV*TAGVGK Trigger: CTTTCCCACACCTGCTGTCAAAACTTTTCTGCAGTT...AACATCCCTCCATGGGCTATTTCTTTTTGCTTCAGAGAATAATTCCTGTACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGTTCCAGGACAGCCAAGGCTACACAGGTTGTGTCAAAAATTGAAAGAAAACCAAGGCTACACAGGTaGTGTCAAAAATTGAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VSSRTAKATQVVSKIERKPRLHR*CQKLKE Trigger: TTCTTTCAATTTTTGACACAACCTGTGTAGCCTTGG...TTTTCTTTCAATTTTTGACACAACCTGTGTAGCCTTGGCTGTCCTGGAACTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTACTCCATCCCTGTGTaGGCAAATCCATTTTATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LGSGEKWQQSEVYTKGKWYSIPV*ANPFYF Trigger: GAAATAAAATGGATTTGCCAACACAGGGATGGAGTA...CCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTCCACTTGGAATATATTaGGCTGTTCAGGCATCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LGQVRNGSNLRFILKENGPLGIY*AVQASN Trigger: ATTGGATGCCTGAACAGCCAAATATATTCCAAGTGG...ACCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTTGAATGGTTTATGAGACAAGTTTTGAGGTTCATCTGCAGGCTGGCTTGGCTTGGTTTCCAATACTaGGAAAATGAAGACTGCATA | + |
|
Preference number: 3 (lower is better) Translates to: IFEWFMRQVLRFICRLAWLGFQY*ENEDCI Trigger: TATGCAGTCTTCATTTTCCAAGTATTGGAAACCAAG...CCAAGCCAGCCTGCAGATGAACCTCAAAACTTGTCTCATAAACCATTCAAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCGATTGTTTCCGGTCTTaGGTTTTTAATGCAGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSDCFRS*VFNAVT Trigger: TGTGACTGCATTAAAAACCAAAGACCGGAAACAATC...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTGATTGTTTCCGGTCTTaGGTTTTTAATGCAGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LGQVRNGSNLRFILKENGDCFRS*VFNAVT Trigger: TGTGACTGCATTAAAAACCAAAGACCGGAAACAATC...ACCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR GCA 72 bp | ATTTGGGAAGGATTAGGAGATATGTATGGCCTTGTATaGCACAAGGCAGTAAACTTTGAGGTTTCAAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: IWEGLGDMYGLV*HKAVNFEVSKV Trigger: GACTTTTGAAACCTCAAAGTTTACTGCCTTGTGGCATACAAGGCCATACATATCTCCTAATCCTTCCCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR GCA 72 bp | ATCTCAAGTCTTATGTTTTTAACTTCTGTCAATACATaGACAAACTGCCTCAGCAGGAGCACTGAGAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ISSLMFLTSVNT*TNCLSRSTEKV Trigger: CACTTTCTCAGTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACTTGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCAACCTAAAGCATGCATaGAGTCAAATTGATACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSNLKHA*SQIDTF Trigger: GAAGGTATCAATTTGACTCAATGCATGCTTTAGGTT...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTAACCTAAAGCATGCATaGAGTCAAATTGATACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LGQVRNGSNLRFILKENGNLKHA*SQIDTF Trigger: GAAGGTATCAATTTGACTCAATGCATGCTTTAGGTT...ACCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCAAGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGGCTTCTGCCGAACCATaGTACAAATATCTGCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: HLKSYVFNFCQYMHKLPQASAEP*YKYLHQ Trigger: TTGATGCAGATATTTGTACAATGGTTCGGCAGAAGC...CTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACTTGAGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACCTTGGTTTCCAATACTaGGAAAATGAAGACTGCATA | + |
|
Preference number: 3 (lower is better) Translates to: SYVFNFCQYMHKLPQQEHLGFQY*ENEDCI Trigger: TATGCAGTCTTCATTTTCCAAGTATTGGAAACCAAG...GTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCAAGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGTACTCCATCCCTGTGTaGGCAAATCCATTTTATTTC | + |
|
Preference number: 3 (lower is better) Translates to: HLKSYVFNFCQYMHKLPQYSIPV*ANPFYF Trigger: GAAATAAAATGGATTTGCCAACACAGGGATGGAGTA...CTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACTTGAGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGGCTTCTGCCGAACCATaGTACAAATATCTGCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLASAEP*YKYLHQ Trigger: TTGATGCAGATATTTGTACAATGGTTCGGCAGAAGC...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGAGGGCTTCTGCCGAACCATaGTACAAATATCTGCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: AAFWNFNIFEWFMRQVLRASAEP*YKYLHQ Trigger: TTGATGCAGATATTTGTACAATGGTTCGGCAGAAGC...CCTCAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR TCA 72 bp | GTATGTTTGTTGGTGATAAATGATCGTGAGCAAAGTTaGGAAGCTCCCTGTGAACAGAAGCTACTATTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VCLLVINDREQS*EAPCEQKLLFK Trigger: TTTAAATAGTAGCTTCTGTTCACAGGGAGCTTCTCAACTTTGCTCACGATCATTTATCACCAACAAACATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGAATAATATGGGATATTaGTTCTGCTTCTGCCGAACC | + |
|
Preference number: 3 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLNNMGY*FCFCRT Trigger: GGTTCGGCAGAAGCAGAACAAATATCCCATATTATT...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGCTGCCACACCCCCATGATGGGCATGGGCTCACCGTCTGGAACTGCCAACCCCACATTCTGGCTGTaGGTGCCTGCACTTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: ACCHTPMMGMGSPSGTANPTFWL*VPALEL Trigger: GAGTTCAAGTGCAGGCACTCACAGCCAGAATGTGGG...GTTGGCAGTTCCAGACGGTGAGCCCATGCCCATCATGGGGGTGTGGCAGCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR TCA 90 bp | GCCTGCTGCCACACCCCCATGATGGGCATGGGCTCACCGTCTGGAACTGCCAACCAGCAGGTGAGGTCATaGTACACCACGGGCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ACCHTPMMGMGSPSGTANQQVRS*YTTGTK Trigger: CTTTGTGCCCGTGGTGTATCATGACCTCACCTGCTG...GTTGGCAGTTCCAGACGGTGAGCCCATGCCCATCATGGGGGTGTGGCAGCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR TCA 90 bp | CCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCAAAGCCAGCTGGCTTACCCCACATTCTGGCTGTaGGTGCCTGCACTTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PLRRQRQMYLRVQSQLAYPTFWL*VPALEL Trigger: GAGTTCAAGTGCAGGCACTCACAGCCAGAATGTGGG...GTAAGCCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR TCA 90 bp | AAACCTAAGAGGCAACAGCAGTGCTCGATGGTGAAAACTAAACATGAGGGCAGCCAGCAGGTGAGGTCATaGTACACCACGGGCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPKRQQQCSMVKTKHEGSQQVRS*YTTGTK Trigger: CTTTGTGCCCGTGGTGTATCATGACCTCACCTGCTG...GCTGCCCTCATGTTTAGTTTTCACCATCGAGCACTGCTGTTGCCTCTTAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTGTATGCCACAAGGCAGTAAACTTTGAGGTTTCAAAAGTCCACACCAGGACAGGAGGCATGCTGTaGCCACGTGTCCAGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLVCHKAVNFEVSKVHTRTGGML*PRVQEE Trigger: TTCTTCCTGGACACGTGGGCACAGCATGCCTCCTGT...CCTGGTGTGGACTTTTGAAACCTCAAAGTTTACTGCCTTGTGGCATACAAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR TCA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGCCCACATTCTGGCTGTaGGTGCCTGCACTTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: HYCFIGLKNLRGNSSARWPTFWL*VPALEL Trigger: GAGTTCAAGTGCAGGCACTCACAGCCAGAATGTGGG...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR GCA 90 bp | CCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCAAAGCCAGCTGGCTTACCTGTGCAAAACTCATTaGAATGGGTGTTGTCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLRRQRQMYLRVQSQLAYLCKTH*NGCCPR Trigger: TCTCGGACAACACCCATTGCAATGAGTTTTGCACAG...GTAAGCCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCGATGGTGAAAACTAAACATGAGGGCAGCGGTGTGCCCCTAAATGTCCTCCAACACCATTGTGGATaGCAAACTGTCCATCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSMVKTKHEGSGVPLNVLQHHCG*QTVHRQ Trigger: TTGACGATGGACAGTTTGGCATCCACAATGGTGTTG...GAGGACATTTAGGGGCACACCGCTGCCCTCATGTTTAGTTTTCACCATCGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000149854.8 |
||
| CDS-3UTR CCA 90 bp | CCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCAAAGCCAGCTGGCTTACGTTTCAACACCATTGTaGATGCCAAACTGTCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: PLRRQRQMYLRVQSQLAYVSTPL*MPNCPS Trigger: CGATGGACAGTTTGGCATCCACAATGGTGTTGAAAC...GTAAGCCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000149854.8 |
||
| 3UTR CAA 72 bp | CCTGTCTGTCTGTCTGTCTGTCTCTCTGCTTCCTGCTaGTGGATCAGAAGTAAGCTGTTAGCTACTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVCLSVCLSASC*WIRSKLLATTP Trigger: TGGAGTAGTAGCTAACAGCTTACTTCTGATCCACAAGCAGGAAGCAGAGAGACAGACAGACAGACAGACAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR TCA 90 bp | GGCCTTGTATGCCACAAGGCAGTAAACTTTGAGGTTTCAAAAGTCCACACCAGGGGAAGAACATCACCCTaGACTACATGCTCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLVCHKAVNFEVSKVHTRGRTSP*TTCSLR Trigger: TCTCAGTGAGCATGTAGTTCAGGGTGATGTTCTTCC...CCTGGTGTGGACTTTTGAAACCTCAAAGTTTACTGCCTTGTGGCATACAAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR TCA 90 bp | AAACCTAAGAGGCAACAGCAGTGCTCGATGGTGAAAACTAAACATGAGGGCAGCCTGACACTCCTCTATTaGGAGCAATCACTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPKRQQQCSMVKTKHEGSLTLLY*EQSLLS Trigger: GGAAAGCAGTGATTGCTCTCAATAGAGGAGTGTCAG...GCTGCCCTCATGTTTAGTTTTCACCATCGAGCACTGCTGTTGCCTCTTAGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTGTATGCCACAAGGCAGTAAACTTTGAGGTTTCAAAAGTCCACACCAGGCATTCTGGCTGTGAGTaGCTGCACTTGAACTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GLVCHKAVNFEVSKVHTRHSGCE*LHLNSL Trigger: CAATGAGTTCAAGTGCAGGCACTCACAGCCAGAATG...CCTGGTGTGGACTTTTGAAACCTCAAAGTTTACTGCCTTGTGGCATACAAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR GCA 90 bp | TTGTGGATCAGAAGTAAGCTGTTAGCTACTACTCCAGTGCCATGCCTGCCTGCTCTGTGCAAAACTCATTaGAATGGGTGTTGTCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWIRSKLLATTPVPCLPALCKTH*NGCCPR Trigger: TCTCGGACAACACCCATTGCAATGAGTTTTGCACAG...AGCAGGCAGGCATGGCACTGGAGTAGTAGCTAACAGCTTACTTCTGATCCACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR GCA 90 bp | TGCTCGATGGTGAAAACTAAACATGAGGGCAGCGGTGTGCCCCTAAATGTCCTCTTCAGGCGCTCCAACTaGTCCACTTGGAATATATTT | + |
|
Preference number: 4 (lower is better) Translates to: CSMVKTKHEGSGVPLNVLFRRSN*STWNIF Trigger: AAATATATTCCAAGTGGAGCAGTTGGAGCGCCTGAA...GAGGACATTTAGGGGCACACCGCTGCCCTCATGTTTAGTTTTCACCATCGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCCCCACATTCTGGCTGTaGGTGCCTGCACTTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSPTFWL*VPALEL Trigger: GAGTTCAAGTGCAGGCACTCACAGCCAGAATGTGGG...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTCAGCAGGTGAGGTCATaGTACACCACGGGCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGQVRNGSNLRFILKENGQQVRS*YTTGTK Trigger: CTTTGTGCCCGTGGTGTATCATGACCTCACCTGCTG...ACCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR GCA 90 bp | AAACCTAAGAGGCAACAGCAGTGCTCGATGGTGAAAACTAAACATGAGGGCAGCATCAAATTCTACAAATaGTGCGCCATGACTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPKRQQQCSMVKTKHEGSIKFYK*CAMTGS Trigger: GCTGCCAGTCATGGCGCAGCATTTGTAGAATTTGAT...GCTGCCCTCATGTTTAGTTTTCACCATCGAGCACTGCTGTTGCCTCTTAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR GCA 90 bp | AAACCTAAGAGGCAACAGCAGTGCTCGATGGTGAAAACTAAACATGAGGGCAGCCAACACCATTGTGGATaGCAAACTGTCCATCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KPKRQQQCSMVKTKHEGSQHHCG*QTVHRQ Trigger: TTGACGATGGACAGTTTGGCATCCACAATGGTGTTG...GCTGCCCTCATGTTTAGTTTTCACCATCGAGCACTGCTGTTGCCTCTTAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000149854.8 |
||
| CDS-3UTR GCA 90 bp | TCGATGGTGAAAACTAAACATGAGGGCAGCGGTGTGCCCCTAAATGTCCTCTGTTTCAGGCGCTCCAACTaGTCCACTTGGAATATATTT | + |
|
Preference number: 4 (lower is better) Translates to: SMVKTKHEGSGVPLNVLCFRRSN*STWNIF Trigger: AAATATATTCCAAGTGGAGCAGTTGGAGCGCCTGAA...ACAGAGGACATTTAGGGGCACACCGCTGCCCTCATGTTTAGTTTTCACCATCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCGATGGTGAAAACTAAACATGAGGGCAGCGGTGTGCCCCTAAATGTCCTCAGGAGGTCTTCAGTATaGGCATTTATCCCCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: CSMVKTKHEGSGVPLNVLRRSSV*AFIPKI Trigger: TATTTTGGGGATAAATGCCCATACTGAAGACCTCCT...GAGGACATTTAGGGGCACACCGCTGCCCTCATGTTTAGTTTTCACCATCGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CCA 90 bp | CCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCAAAGCCAGCTGGCTTACTTTTGTGAAGAACAGTaGGAGAGACCTTATCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLRRQRQMYLRVQSQLAYFCEEQ*ERPYRH Trigger: ATGACGATAAGGTCTCTCCCACTGTTCTTCACAAAA...GTAAGCCAGCTGGCTTTGAACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCGATGGTGAAAACTAAACATGAGGGCAGCGGTGTGCCCCTAAATGTCCTCCCAATACTTGGAAAATaGAGACTGCATAGAACAACT | + |
|
Preference number: 4 (lower is better) Translates to: CSMVKTKHEGSGVPLNVLPILGK*RLHRTT Trigger: AGTTGTTCTATGCAGTCTTCATTTTCCAAGTATTGG...GAGGACATTTAGGGGCACACCGCTGCCCTCATGTTTAGTTTTCACCATCGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR GCA 90 bp | ATTATACCTGGACAAGTGACAAATAGCATACTTGATATTCTTGCGGGACCTGTAACAGGAGGCATGCTGTaGCCACGTGTCCAGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IIPGQVTNSILDILAGPVTGGML*PRVQEE Trigger: TTCTTCCTGGACACGTGGGCACAGCATGCCTCCTGT...TACAGGTCCCGCAAGAATATCAAGTATGCTATTTGTCACTTGTCCAGGTATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CCA 90 bp | TCATCTGCAGGCTGGCTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATTCCAACTGCTCCACTTaGAATATATTTGGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSAGWLGSGEKWQQSEVYSNCST*NIFGCS Trigger: TGAACAGCCAAATATATTCCAAGTGGAGCAGTTGGA...ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGGATCAGAAGTAAGCTGTTAGCTACTACTCCAGTGCCATGCCTGCCTGCTCCAATACTTGGAAAATaGAGACTGCATAGAACAACT | + |
|
Preference number: 4 (lower is better) Translates to: LWIRSKLLATTPVPCLPAPILGK*RLHRTT Trigger: AGTTGTTCTATGCAGTCTTCATTTTCCAAGTATTGG...AGCAGGCAGGCATGGCACTGGAGTAGTAGCTAACAGCTTACTTCTGATCCACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR TCA 90 bp | GTGAGTTCCAGGACAGCCAAGGCTACACAGGTTGTGTCAAAAATTGAAAGAAAACTGACACTCCTCTATTaGGAGCAATCACTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSSRTAKATQVVSKIERKLTLLY*EQSLLS Trigger: GGAAAGCAGTGATTGCTCTCAATAGAGGAGTGTCAG...TTTTCTTTCAATTTTTGACACAACCTGTGTAGCCTTGGCTGTCCTGGAACTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| CDS-3UTR GCA 90 bp | TGTCACCTTGGTCATGGTGCCTCTAGAAAGGAACTAAGACAACTGCAGAAAAGTATCAAATTCTACAAATaGTGCGCCATGACTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CHLGHGASRKELRQLQKSIKFYK*CAMTGS Trigger: GCTGCCAGTCATGGCGCAGCATTTGTAGAATTTGAT...ACTTTTCTGCAGTTGTCTTAGTTCCTTTCTAGAGGCACCATGACCAAGGTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR CCA 90 bp | CTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGCACTATCAATGCCGTTaGCATCCACGTGGATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSGEKWQQSEVYTKGKWHYQCR*HPRGYQ Trigger: CTGATATCCACGTGGATGCCAACGGCATTGATAGTG...CCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGACAAATGCTGCGCCATaGCTGGCAGCATTTCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGSGEKWQQSEVYTKGKWTNAAP*LAAFLK Trigger: TTTAAGAAATGCTGCCAGTCATGGCGCAGCATTTGT...CCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGCAGCAGGTGAGGTCATaGTACACCACGGGCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLQQVRS*YTTGTK Trigger: CTTTGTGCCCGTGGTGTATCATGACCTCACCTGCTG...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR TCA 90 bp | TCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACCTGACACTCCTCTATTaGGAGCAATCACTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SYVFNFCQYMHKLPQQEHLTLLY*EQSLLS Trigger: GGAAAGCAGTGATTGCTCTCAATAGAGGAGTGTCAG...GTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCCTGACACTCCTCTATTaGGAGCAATCACTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSLTLLY*EQSLLS Trigger: GGAAAGCAGTGATTGCTCTCAATAGAGGAGTGTCAG...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTCATTCTGGCTGTGAGTaGCTGCACTTGAACTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LGQVRNGSNLRFILKENGHSGCE*LHLNSL Trigger: CAATGAGTTCAAGTGCAGGCACTCACAGCCAGAATG...ACCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCCATTCTGGCTGTGAGTaGCTGCACTTGAACTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSHSGCE*LHLNSL Trigger: CAATGAGTTCAAGTGCAGGCACTCACAGCCAGAATG...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTTGAATGGTTTATGAGACAAGTTTTGAGGTTCATCTGCAGGCTGGCTTGGATCAAATTCTACAAATaGTGCGCCATGACTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IFEWFMRQVLRFICRLAWIKFYK*CAMTGS Trigger: GCTGCCAGTCATGGCGCAGCATTTGTAGAATTTGAT...CCAAGCCAGCCTGCAGATGAACCTCAAAACTTGTCTCATAAACCATTCAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR GCA 90 bp | TTGTGGATCAGAAGTAAGCTGTTAGCTACTACTCCAGTGCCATGCCTGCCTGCTTATTTGTTCTGCTTCTaGCGAACCATTGTACAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LWIRSKLLATTPVPCLPAYLFCF*RTIVQI Trigger: TATTTGTACAATGGTTCGGCAGAAGCAGAACAAATA...AGCAGGCAGGCATGGCACTGGAGTAGTAGCTAACAGCTTACTTCTGATCCACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR GCA 90 bp | CTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGCAACACCATTGTGGATaGCAAACTGTCCATCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGSGEKWQQSEVYTKGKWQHHCG*QTVHRQ Trigger: TTGACGATGGACAGTTTGGCATCCACAATGGTGTTG...CCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000149854.8 |
||
| CDS-3UTR GCA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGTTCAGGCGCTCCAACTaGTCCACTTGGAATATATTT | + |
|
Preference number: 4 (lower is better) Translates to: HYCFIGLKNLRGNSSARWFRRSN*STWNIF Trigger: AAATATATTCCAAGTGGAGCAGTTGGAGCGCCTGAA...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGTATGCCACAAGGCAGTAAACTTTGAGGTTTCAAAAGTCCACACCAGGATGTCCAACGTCCAATaGTATTCTTGGTTTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: GLVCHKAVNFEVSKVHTRMSNVQ*YSWFPI Trigger: TATTGGAAACCAAGAATACCATTGGACGTTGGACAT...CCTGGTGTGGACTTTTGAAACCTCAAAGTTTACTGCCTTGTGGCATACAAGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR CCA 90 bp | CTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGGTTTCAACACCATTGTaGATGCCAAACTGTCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: LGSGEKWQQSEVYTKGKWVSTPL*MPNCPS Trigger: CGATGGACAGTTTGGCATCCACAATGGTGTTGAAAC...CCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000149854.8 |
||
| CDS-3UTR CCA 90 bp | TGGCGCATGACTTTAATACCACTTAGGAGGCAGAGGCAGATGTATCTGAGAGTTCACTTGGAATATATTTaGCTGTTCAGGCATCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: WRMTLIPLRRQRQMYLRVHLEYI*LFRHPI Trigger: GATTGGATGCCTGAACAGCCAAATATATTCCAAGTG...AACTCTCAGATACATCTGCCTCTGCCTCCTAAGTGGTATTAAAGTCATGCGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CCA 90 bp | TCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACCACTATCAATGCCGTTaGCATCCACGTGGATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYVFNFCQYMHKLPQQEHHYQCR*HPRGYQ Trigger: CTGATATCCACGTGGATGCCAACGGCATTGATAGTG...GTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGAGGAGGTCTTCAGTATaGGCATTTATCCCCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LGSGEKWQQSEVYTKGKWRRSSV*AFIPKI Trigger: TATTTTGGGGATAAATGCCCATACTGAAGACCTCCT...CCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGTTCCAGGACAGCCAAGGCTACACAGGTTGTGTCAAAAATTGAAAGAAAATCCAACTGCTCCACTTaGAATATATTTGGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSRTAKATQVVSKIERKSNCST*NIFGCS Trigger: TGAACAGCCAAATATATTCCAAGTGGAGCAGTTGGA...TTTTCTTTCAATTTTTGACACAACCTGTGTAGCCTTGGCTGTCCTGGAACTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAAAGAGGCCAGGAAGGAAAAGACACATGGTATAAAGTTACATACATGTATACAAATGCTGCGCCATaGCTGGCAGCATTTCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VQRGQEGKDTWYKVTYMYTNAAP*LAAFLK Trigger: TTTAAGAAATGCTGCCAGTCATGGCGCAGCATTTGT...ATACATGTATGTAACTTTATACCATGTGTCTTTTCCTTCCTGGCCTCTTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGCTGACACTCCTCTATTaGGAGCAATCACTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLLTLLY*EQSLLS Trigger: GGAAAGCAGTGATTGCTCTCAATAGAGGAGTGTCAG...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCCCAATACTTGGAAAATaGAGACTGCATAGAACAACT | + |
|
Preference number: 4 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSPILGK*RLHRTT Trigger: AGTTGTTCTATGCAGTCTTCATTTTCCAAGTATTGG...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGAGGACAAATGCTGCGCCATaGCTGGCAGCATTTCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: AAFWNFNIFEWFMRQVLRTNAAP*LAAFLK Trigger: TTTAAGAAATGCTGCCAGTCATGGCGCAGCATTTGT...CCTCAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGACAAATGCTGCGCCATaGCTGGCAGCATTTCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLTNAAP*LAAFLK Trigger: TTTAAGAAATGCTGCCAGTCATGGCGCAGCATTTGT...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGCTGTGCAAAACTCATTaGAATGGGTGTTGTCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLLCKTH*NGCCPR Trigger: TCTCGGACAACACCCATTGCAATGAGTTTTGCACAG...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGAGCTTTACCTGTGGATaGCAAACTGTCCATCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLSFTCG*QTVHRQ Trigger: TTGACGATGGACAGTTTGGCATCCACAGGTAAAGCT...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148833.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCATGTCCAACGTCCAATaGTATTCTTGGTTTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SLMFLTSVNTCTNCLSRSMSNVQ*YSWFPI Trigger: TATTGGAAACCAAGAATACCATTGGACGTTGGACAT...GCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTACAGGAATTATTCTCTGAAGCAAAAAGAAATAGCCCATGGAGGGATGTTAGGAGGTCTTCAGTATaGGCATTTATCCCCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SVQELFSEAKRNSPWRDVRRSSV*AFIPKI Trigger: TATTTTGGGGATAAATGCCCATACTGAAGACCTCCT...AACATCCCTCCATGGGCTATTTCTTTTTGCTTCAGAGAATAATTCCTGTACACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR CCA 90 bp | ATTATACCTGGACAAGTGACAAATAGCATACTTGATATTCTTGCGGGACCTGTAAGGAGGTCTTCAGTATaGGCATTTATCCCCAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: IIPGQVTNSILDILAGPVRRSSV*AFIPKI Trigger: TATTTTGGGGATAAATGCCCATACTGAAGACCTCCT...TACAGGTCCCGCAAGAATATCAAGTATGCTATTTGTCACTTGTCCAGGTATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGGTTTCAACACCATTGTaGATGCCAAACTGTCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLVSTPL*MPNCPS Trigger: CGATGGACAGTTTGGCATCCACAATGGTGTTGAAAC...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000149854.8 |
||
| CDS-3UTR GCA 90 bp | TCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACTATTTGTTCTGCTTCTaGCGAACCATTGTACAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SYVFNFCQYMHKLPQQEHYLFCF*RTIVQI Trigger: TATTTGTACAATGGTTCGGCAGAAGCAGAACAAATA...GTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CCA 90 bp | ATTATACCTGGACAAGTGACAAATAGCATACTTGATATTCTTGCGGGACCTGTAATGTCCAACGTCCAATaGTATTCTTGGTTTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: IIPGQVTNSILDILAGPVMSNVQ*YSWFPI Trigger: TATTGGAAACCAAGAATACCATTGGACGTTGGACAT...TACAGGTCCCGCAAGAATATCAAGTATGCTATTTGTCACTTGTCCAGGTATAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTACAGGAATTATTCTCTGAAGCAAAAAGAAATAGCCCATGGAGGGATGTTATTGTTTCCGGTCTTTaGTTTTTAATGCAGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SVQELFSEAKRNSPWRDVIVSGL*FLMQSH Trigger: ATGTGACTGCATTAAAAACCAAAGACCGGAAACAAT...AACATCCCTCCATGGGCTATTTCTTTTTGCTTCAGAGAATAATTCCTGTACACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR CCA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGTTTTGTGAAGAACAGTaGGAGAGACCTTATCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLFCEEQ*ERPYRH Trigger: ATGACGATAAGGTCTCTCCCACTGTTCTTCACAAAA...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 |
||
| CDS-3UTR GCA 90 bp | CATCTCAAGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGTATTTGTTCTGCTTCTaGCGAACCATTGTACAAATA | + |
|
Preference number: 4 (lower is better) Translates to: HLKSYVFNFCQYMHKLPQYLFCF*RTIVQI Trigger: TATTTGTACAATGGTTCGGCAGAAGCAGAACAAATA...CTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACTTGAGATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGATGTCCAACGTCCAATaGTATTCTTGGTTTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLMSNVQ*YSWFPI Trigger: TATTGGAAACCAAGAATACCATTGGACGTTGGACAT...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| 3UTR CAA 72 bp | TCAGACTTTCCTTGGGTCAAAAATAATATGGGATATTaGTTCTGCTTCTGCCGAACCATTGTACAAATATCT | + |
|
Preference number: 4 (lower is better) Translates to: SDFPWVKNNMGY*FCFCRTIVQIS Trigger: AGATATTTGTACAATGGTTCGGCAGAAGCAGAACAAATATCCCATATTATTTTTGACCCAAGGAAAGTCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000124632.2 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| 3UTR CAA 72 bp | GAAGACTGCATAGAACAACTATATCCAGGTAATGGCTaGATGATGATAAAATCAACTCTGACTTTGCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: EDCIEQLYPGNG*MMIKSTLTLPI Trigger: TATAGGCAAAGTCAGAGTTGATTTTATCATCATCAAGCCATTACCTGGATATAGTTGTTCTATGCAGTCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGTATTTGTTCTGCTTCTaGCGAACCATTGTACAAATA | + |
|
Preference number: 4 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLYLFCF*RTIVQI Trigger: TATTTGTACAATGGTTCGGCAGAAGCAGAACAAATA...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGCTGCCACACCCCCATGATGGGCATGGGCTCACCGTCTGGAACTGCCAACGCTTCTGCCGAACCATaGTACAAATATCTGCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: ACCHTPMMGMGSPSGTANASAEP*YKYLHQ Trigger: TTGATGCAGATATTTGTACAATGGTTCGGCAGAAGC...GTTGGCAGTTCCAGACGGTGAGCCCATGCCCATCATGGGGGTGTGGCAGCAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR CAA 90 bp | GGCCTTGTATGCCACAAGGCAGTAAACTTTGAGGTTTCAAAAGTCCACACCAGGGCTTGGCAGTCGTTGTaGAGTTCCCTGCACCACGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLVCHKAVNFEVSKVHTRAWQSL*SSLHHD Trigger: ATCGTGGTGCAGGGAACTCAACAACGACTGCCAAGC...CCTGGTGTGGACTTTTGAAACCTCAAAGTTTACTGCCTTGTGGCATACAAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR CAA 90 bp | TGCTCGATGGTGAAAACTAAACATGAGGGCAGCGGTGTGCCCCTAAATGTCCTCACTGTGCAAAACTCATaGCAATGGGTGTTGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSMVKTKHEGSGVPLNVLTVQNS*QWVLSE Trigger: CTCGGACAACACCCATTGCAATGAGTTTTGCACAGT...GAGGACATTTAGGGGCACACCGCTGCCCTCATGTTTAGTTTTCACCATCGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CAA 90 bp | TCGATGGTGAAAACTAAACATGAGGGCAGCGGTGTGCCCCTAAATGTCCTCTGTACTGTGCAAAACTCATaGCAATGGGTGTTGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SMVKTKHEGSGVPLNVLCTVQNS*QWVLSE Trigger: CTCGGACAACACCCATTGCAATGAGTTTTGCACAGT...ACAGAGGACATTTAGGGGCACACCGCTGCCCTCATGTTTAGTTTTCACCATCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | TCGATGGTGAAAACTAAACATGAGGGCAGCGGTGTGCCCCTAAATGTCCTCTGTACTGACACTCCTCTATaGAGAGCAATCACTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SMVKTKHEGSGVPLNVLCTDTPL*RAITAF Trigger: GAAAGCAGTGATTGCTCTCAATAGAGGAGTGTCAGT...ACAGAGGACATTTAGGGGCACACCGCTGCCCTCATGTTTAGTTTTCACCATCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| CDS-3UTR CAA 90 bp | TCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACCTAGCTTGGCAGTCGTaGTTGAGTTCCCTGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SYVFNFCQYMHKLPQQEHLAWQS*LSSLHH Trigger: GTGGTGCAGGGAACTCAACAACGACTGCCAAGCTAG...GTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | TCGATGGTGAAAACTAAACATGAGGGCAGCGGTGTGCCCCTAAATGTCCTCTGTGCTTCTGCCGAACCATaGTACAAATATCTGCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SMVKTKHEGSGVPLNVLCASAEP*YKYLHQ Trigger: TTGATGCAGATATTTGTACAATGGTTCGGCAGAAGC...ACAGAGGACATTTAGGGGCACACCGCTGCCCTCATGTTTAGTTTTCACCATCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | TTGTGGATCAGAAGTAAGCTGTTAGCTACTACTCCAGTGCCATGCCTGCCTGCTGATTGTTTCCGGTCTTaGGTTTTTAATGCAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LWIRSKLLATTPVPCLPADCFRS*VFNAVT Trigger: TGTGACTGCATTAAAAACCAAAGACCGGAAACAATC...AGCAGGCAGGCATGGCACTGGAGTAGTAGCTAACAGCTTACTTCTGATCCACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| CDS-3UTR CAA 90 bp | TCATCTGCAGGCTGGCTTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATGATTGTTTCCGGTCTTaGGTTTTTAATGCAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SSAGWLGSGEKWQQSEVYDCFRS*VFNAVT Trigger: TGTGACTGCATTAAAAACCAAAGACCGGAAACAATC...ATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAAGCCAGCCTGCAGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | AAACCTAAGAGGCAACAGCAGTGCTCGATGGTGAAAACTAAACATGAGGGCAGCGCTTCTGCCGAACCATaGTACAAATATCTGCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: KPKRQQQCSMVKTKHEGSASAEP*YKYLHQ Trigger: TTGATGCAGATATTTGTACAATGGTTCGGCAGAAGC...GCTGCCCTCATGTTTAGTTTTCACCATCGAGCACTGCTGTTGCCTCTTAGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CAA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGACTGTGCAAAACTCATaGCAATGGGTGTTGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: HYCFIGLKNLRGNSSARWTVQNS*QWVLSE Trigger: CTCGGACAACACCCATTGCAATGAGTTTTGCACAGT...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CAA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGACACTATCAATGCCGTaGGCATCCACGTGGATATCA | + |
|
Preference number: 5 (lower is better) Translates to: HYCFIGLKNLRGNSSARWTLSMP*ASTWIS Trigger: TGATATCCACGTGGATGCCAACGGCATTGATAGTGT...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | AGTCAGGGAAATGTCCTGAGTTGGATACATAAAGTACTGTTAATGCATAAAGATCTAGCTTGGCAGTCGTaGTTGAGTTCCCTGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQGNVLSWIHKVLLMHKDLAWQS*LSSLHH Trigger: GTGGTGCAGGGAACTCAACAACGACTGCCAAGCTAG...ATCTTTATGCATTAACAGTACTTTATGTATCCAACTCAGGACATTTCCCTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR CAA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGGCTTCTGCCGAACCATaGTACAAATATCTGCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: HYCFIGLKNLRGNSSARWASAEP*YKYLHQ Trigger: TTGATGCAGATATTTGTACAATGGTTCGGCAGAAGC...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | GTGAGTTCCAGGACAGCCAAGGCTACACAGGTTGTGTCAAAAATTGAAAGAAAAACTGACACTCCTCTATaGAGAGCAATCACTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSSRTAKATQVVSKIERKTDTPL*RAITAF Trigger: GAAAGCAGTGATTGCTCTCAATAGAGGAGTGTCAGT...TTTTCTTTCAATTTTTGACACAACCTGTGTAGCCTTGGCTGTCCTGGAACTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| CDS-3UTR CAA 90 bp | ATAGTATTTTCCTGTACTTTAGCTAGCTTGGCAGTCGTTGTTGAGTTCCCTGCAACTGACACTCCTCTATaGAGAGCAATCACTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IVFSCTLASLAVVVEFPATDTPL*RAITAF Trigger: GAAAGCAGTGATTGCTCTCAATAGAGGAGTGTCAGT...TGCAGGGAACTCAACAACGACTGCCAAGCTAGCTAAAGTACAGGAAAATACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| CDS-3UTR CAA 90 bp | TGTCACCTTGGTCATGGTGCCTCTAGAAAGGAACTAAGACAACTGCAGAAAAGTTACTCCATCCCTGTGTaGGCAAATCCATTTTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: CHLGHGASRKELRQLQKSYSIPV*ANPFYF Trigger: GAAATAAAATGGATTTGCCAACACAGGGATGGAGTA...ACTTTTCTGCAGTTGTCTTAGTTCCTTTCTAGAGGCACCATGACCAAGGTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| CDS-3UTR CAA 90 bp | CATTATTGCTTCATTGGACTGAAAAACCTAAGAGGCAACAGCAGTGCTCGATGGTACTCCATCCCTGTGTaGGCAAATCCATTTTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: HYCFIGLKNLRGNSSARWYSIPV*ANPFYF Trigger: GAAATAAAATGGATTTGCCAACACAGGGATGGAGTA...CCATCGAGCACTGCTGTTGCCTCTTAGGTTTTTCAGTCCAATGAAGCAATAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | TTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTAGTGTTTCAACACCATaGTGGATGCCAAACTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGQVRNGSNLRFILKENGSVSTP*WMPNCP Trigger: TGGACAGTTTGGCATCCACAATGGTGTTGAAACACT...ACCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000149854.8 |
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| CDS-3UTR CAA 90 bp | TCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCAGGAGCACAGTGTTTCAACACCATaGTGGATGCCAAACTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SYVFNFCQYMHKLPQQEHSVSTP*WMPNCP Trigger: TGGACAGTTTGGCATCCACAATGGTGTTGAAACACT...GTGCTCCTGCTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000149854.8 |
||
| CDS-3UTR CAA 90 bp | ATCTTTGAATGGTTTATGAGACAAGTTTTGAGGTTCATCTGCAGGCTGGCTTGGGATTGTTTCCGGTCTTaGGTTTTTAATGCAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: IFEWFMRQVLRFICRLAWDCFRS*VFNAVT Trigger: TGTGACTGCATTAAAAACCAAAGACCGGAAACAATC...CCAAGCCAGCCTGCAGATGAACCTCAAAACTTGTCTCATAAACCATTCAAAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | ATCTTTGAATGGTTTATGAGACAAGTTTTGAGGTTCATCTGCAGGCTGGCTTGGTACTCCATCCCTGTGTaGGCAAATCCATTTTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: IFEWFMRQVLRFICRLAWYSIPV*ANPFYF Trigger: GAAATAAAATGGATTTGCCAACACAGGGATGGAGTA...CCAAGCCAGCCTGCAGATGAACCTCAAAACTTGTCTCATAAACCATTCAAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | ATCTTTGAATGGTTTATGAGACAAGTTTTGAGGTTCATCTGCAGGCTGGCTTGGAATAATATGGGATATTaGTTCTGCTTCTGCCGAACC | + |
|
Preference number: 5 (lower is better) Translates to: IFEWFMRQVLRFICRLAWNNMGY*FCFCRT Trigger: GGTTCGGCAGAAGCAGAACAAATATCCCATATTATT...CCAAGCCAGCCTGCAGATGAACCTCAAAACTTGTCTCATAAACCATTCAAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | CATCTCAAGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGACACTATCAATGCCGTaGGCATCCACGTGGATATCA | + |
|
Preference number: 5 (lower is better) Translates to: HLKSYVFNFCQYMHKLPQTLSMP*ASTWIS Trigger: TGATATCCACGTGGATGCCAACGGCATTGATAGTGT...CTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACTTGAGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | AGTCAGGGAAATGTCCTGAGTTGGATACATAAAGTACTGTTAATGCATAAAGATACTGTGCAAAACTCATaGCAATGGGTGTTGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQGNVLSWIHKVLLMHKDTVQNS*QWVLSE Trigger: CTCGGACAACACCCATTGCAATGAGTTTTGCACAGT...ATCTTTATGCATTAACAGTACTTTATGTATCCAACTCAGGACATTTCCCTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
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| CDS-3UTR CAA 90 bp | TTGGGTCAGGTGAGAAATGGCAGCAATCTGAGGTTTATACTAAAGGAAAATGGTCTTGGTTTCCAATACTaGGAAAATGAAGACTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: LGQVRNGSNLRFILKENGLGFQY*ENEDCI Trigger: TATGCAGTCTTCATTTTCCAAGTATTGGAAACCAAG...ACCATTTTCCTTTAGTATAAACCTCAGATTGCTGCCATTTCTCACCTGACCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | ATTATACCTGGACAAGTGACAAATAGCATACTTGATATTCTTGCGGGACCTGTAGATTGTTTCCGGTCTTaGGTTTTTAATGCAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: IIPGQVTNSILDILAGPVDCFRS*VFNAVT Trigger: TGTGACTGCATTAAAAACCAAAGACCGGAAACAATC...TACAGGTCCCGCAAGAATATCAAGTATGCTATTTGTCACTTGTCCAGGTATAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | GCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGAGGACTGACACTCCTCTATaGAGAGCAATCACTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAFWNFNIFEWFMRQVLRTDTPL*RAITAF Trigger: GAAAGCAGTGATTGCTCTCAATAGAGGAGTGTCAGT...CCTCAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060955.12 ENSMUST00000110142.8 ENSMUST00000145694.8 ENSMUST00000148833.8 ENSMUST00000149854.8 |
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| CDS-3UTR CAA 90 bp | GAACAACTATATCCAGGTAATGGCTTGATGATGATAAAATCAACTCTGACTTTGAGTGTTTCAACACCATaGTGGATGCCAAACTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EQLYPGNGLMMIKSTLTLSVSTP*WMPNCP Trigger: TGGACAGTTTGGCATCCACAATGGTGTTGAAACACT...CAAAGTCAGAGTTGATTTTATCATCATCAAGCCATTACCTGGATATAGTTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149854.8 |
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| CDS-3UTR CAA 90 bp | GCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGAGGCCACTTGGAATATATTaGGCTGTTCAGGCATCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: AAFWNFNIFEWFMRQVLRPLGIY*AVQASN Trigger: ATTGGATGCCTGAACAGCCAAATATATTCCAAGTGG...CCTCAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | CCTGCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGCCACTTGGAATATATTaGGCTGTTCAGGCATCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PAAFWNFNIFEWFMRQVLPLGIY*AVQASN Trigger: ATTGGATGCCTGAACAGCCAAATATATTCCAAGTGG...CAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
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| CDS-3UTR CAA 90 bp | ATTATACCTGGACAAGTGACAAATAGCATACTTGATATTCTTGCGGGACCTGTAATGATTTCACTTTCTTaGGTTCTAAAAAGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IIPGQVTNSILDILAGPVMISLS*VLKSSL Trigger: GAGGCTGCTTTTTAGAACCAAAGAAAGTGAAATCAT...TACAGGTCCCGCAAGAATATCAAGTATGCTATTTGTCACTTGTCCAGGTATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148833.8 ENSMUST00000149854.8 |
||
| CDS-3UTR CAA 90 bp | CATCTCAAGTCTTATGTTTTTAACTTCTGTCAATACATGCACAAACTGCCTCAGCTTGGTTTCCAATACTaGGAAAATGAAGACTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: HLKSYVFNFCQYMHKLPQLGFQY*ENEDCI Trigger: TATGCAGTCTTCATTTTCCAAGTATTGGAAACCAAG...CTGAGGCAGTTTGTGCATGTATTGACAGAAGTTAAAAACATAAGACTTGAGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060955.12 ENSMUST00000110136.8 ENSMUST00000110142.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAGGGAAATGTCCTGAGTTGGATACATAAAGTACTGTTAATGCATAAAGATAATAATATGGGATATTaGTTCTGCTTCTGCCGAACC | + |
|
Preference number: 5 (lower is better) Translates to: SQGNVLSWIHKVLLMHKDNNMGY*FCFCRT Trigger: GGTTCGGCAGAAGCAGAACAAATATCCCATATTATT...ATCTTTATGCATTAACAGTACTTTATGTATCCAACTCAGGACATTTCCCTGACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR CAA 90 bp | AGTCAGGGAAATGTCCTGAGTTGGATACATAAAGTACTGTTAATGCATAAAGATCTTGGTTTCCAATACTaGGAAAATGAAGACTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: SQGNVLSWIHKVLLMHKDLGFQY*ENEDCI Trigger: TATGCAGTCTTCATTTTCCAAGTATTGGAAACCAAG...ATCTTTATGCATTAACAGTACTTTATGTATCCAACTCAGGACATTTCCCTGACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028822.14 |
||
| CDS-3UTR CAA 90 bp | GCAGCATTCTGGAACTTTAATATCTTTGAATGGTTTATGAGACAAGTTTTGAGGATGATTTCACTTTCTTaGGTTCTAAAAAGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAFWNFNIFEWFMRQVLRMISLS*VLKSSL Trigger: GAGGCTGCTTTTTAGAACCAAAGAAAGTGAAATCAT...CCTCAAAACTTGTCTCATAAACCATTCAAAGATATTAAAGTTCCAGAATGCTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000148833.8 ENSMUST00000149854.8 |
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