Pregenerated sensors for GPC6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058571Ensembl transcript IDs: ENSMUST00000078849.12, ENSMUST00000088483.10, ENSMUST00000125435.2
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACATTCCATCACCAGTCACGTCTTGCACACCAGGCTTGTCCCATaGGCTCAGGACAGTTTGGAGCACCAGGGGAAAAGCAAGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: THSITSHVLHTRLVP*AQDSLEHQGKSKCV Trigger: CACACACTTGCTTTTCCCCTGGTGCTCCAAACTGTCCTGAGCTCATGGGACAAGCCTGGTGTGCAAGACGTGACTGGTGATGGAATGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR TCA 90 bp | GCTCTTGATTCTTGGTGCTCGAAGATCACTAAGGAGTCTGTTCTCTaGGCAGCACAGAACAAGACGGGGCGGTTGACAAAACAGTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: ALDSWCSKITKESVL*AAQNKTGRLTKQFC Trigger: ACAGAACTGTTTTGTCAACCGCCCCGTCTTGTTCTGTGCTGCTCAGAGAACAGACTCCTTAGTGATCTTCGAGCACCAAGAATCAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR CCA 90 bp | CAGACCTCAAGACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTaGCATGGTCCATTGTTCAAGAGTGTAAGAAAAGAAGGGTGTTGG | + |
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Preference number: 1 (lower is better) Translates to: QTSRLLSCHRKRLVV*HGPLFKSVRKEGCW Trigger: CCAACACCCTTCTTTTCTTACACTCTTGAACAATGGACCATGCCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTCTTGAGGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGGGGAGGGTCCGGAACACAGGAGCTGAGACATCTGGTTCATGTCCGTCTGAGAAGCAAGCCATCTaGCACCCGGTACTCTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: IWGRVRNTGAETSGSCPSEKQAI*HPVLFG Trigger: CCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTC...AGACGGACATGAACCAGATGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR-3UTR GCA 90 bp | CACCAGGCTTGTCCCATGAGCTCAGGACAGTTTGGAGCACCAGGGGAAAAGCAATGTGTGAGAAGGGTGTaGCCTGGCAAACTTGCCATC | + |
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Preference number: 2 (lower is better) Translates to: HQACPMSSGQFGAPGEKQCVRRV*PGKLAI Trigger: GATGGCAAGTTTGCCAGGGCACACCCTTCTCACACA...TTGCTTTTCCCCTGGTGCTCCAAACTGTCCTGAGCTCATGGGACAAGCCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR CAA 90 bp | ATAGCTGACGGAAAGAGAAGCAAGCCATCTGGCACCCGGTACTCTTaGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: IADGKRSKPSGTRYS*GKQKGEADLKTALL Trigger: CAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCTTTCCGTCAGCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| 3UTR-3UTR CCA 90 bp | GACGGGGCGGTTGACAAAACAGTTCTGTTACAAAGGAGTGTCAACCCTGAGCTTGCACCCGGTACTCTTTaGGAAAGCAAAAAGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: DGAVDKTVLLQRSVNPELAPGTL*ESKKGR Trigger: CCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGC...AAGCTCAGGGTTGACACTCCTTTGTAACAGAACTGTTTTGTCAACCGCCCCGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR-3UTR TCA 90 bp | CACCAGGCTTGTCCCATGAGCTCAGGACAGTTTGGAGCACCAGGGGAAAAGCAAAAAAGTTCTCGCTCTTaGTTCTTGGTGCTCGAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: HQACPMSSGQFGAPGEKQKSSRS*FLVLED Trigger: ATCTTCGAGCACCAAGAATCAAGAGCGAGAACTTTT...TTGCTTTTCCCCTGGTGCTCCAAACTGTCCTGAGCTCATGGGACAAGCCTGGTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR-3UTR TCA 90 bp | GCTTGTCCCATGAGCTCAGGACAGTTTGGAGCACCAGGGGAAAAGCAAGTGTGTTTGGTACGAAAGGTTTaGGTAAGAATTCTCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: ACPMSSGQFGAPGEKQVCLVRKV*VRILSG Trigger: TCCAGAGAGAATTCTTACTCAAACCTTTCGTACCAA...ACACACTTGCTTTTCCCCTGGTGCTCCAAACTGTCCTGAGCTCATGGGACAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR CAA 90 bp | CTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTGGCATGGTCCATaGTTCAAGAGTGTAAGAAAAGAAGGGTGTTGGCCACAGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LLSCHRKRLVVWHGP*FKSVRKEGCWPQKS Trigger: GCTCTTCTGTGGCCAACACCCTTCTTTTCTTACACTCTTGAACAATGGACCATGCCACACAACAAGCCGTTTTCTATGACAAGAGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| 3UTR-3UTR TCA 90 bp | TCACAGAAAAGCTCACTCCAGGAGTTGGCTGTCAGTGCCAAGCCTGATAGCATGTCTTGGGGTTTGGCCTaGTTTGAAACGGAAAATTAT | + |
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Preference number: 2 (lower is better) Translates to: SQKSSLQELAVSAKPDSMSWGLA*FETENY Trigger: ATAATTTTCCGTTTCAAATCAGGCCAAACCCCAAGA...CATGCTATCAGGCTTGGCACTGACAGCCAACTCCTGGAGTGAGCTTTTCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR-3UTR TCA 90 bp | GGGCGGTTGACAAAACAGTTCTGTTACAAAGGAGTGTCAACCCTGAGCTTGGAACCAAGCCTGATAGCATaGAAGTTCCTTTATTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: GRLTKQFCYKGVSTLSLEPSLIA*KFLYFL Trigger: GAGAAAATAAAGGAACTTTCATGCTATCAGGCTTGG...TTCCAAGCTCAGGGTTGACACTCCTTTGTAACAGAACTGTTTTGTCAACCGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR-3UTR CCA 90 bp | TGCAGCATAAAAGCAAACGACGGTAAGAAAACAATCTCTTGGTACGAAAGGTTTAGTAAGAATTCTCTCTaGAATAAACGAGGTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: CSIKANDGKKTISWYERFSKNSL*NKRGPH Trigger: GTGGGGACCTCGTTTATTCCAGAGAGAATTCTTACT...AAACCTTTCGTACCAAGAGATTGTTTTCTTACCGTCGTTTGCTTTTATGCTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| 3UTR TCA 72 bp | ATCACCAGTCACGTCTTGCACACCAGGCTTGTCCCATaGGCTCAGGACAGTTTGGAGCACCAGGGGAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: ITSHVLHTRLVP*AQDSLEHQGKS Trigger: GCTTTTCCCCTGGTGCTCCAAACTGTCCTGAGCTCATGGGACAAGCCTGGTGTGCAAGACGTGACTGGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR TCA 72 bp | AACTCGTATTTGGGGGAGGGTCCGGAACACAGGAGCTaGGACATCTGGTTCATGTCCGTCTGGAGAAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: NSYLGEGPEHRS*DIWFMSVWRKK Trigger: CTTCTTTCTCCAGACGGACATGAACCAGATGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAATACGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR TCA 72 bp | GACAGTTTGGAGCACCAGGGGAAAAGCAAGTGTGTGTaGGAAGGGTGTGCCCTGGCAAACTTGCCATCAATG | + |
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Preference number: 3 (lower is better) Translates to: DSLEHQGKSKCV*EGCALANLPSM Trigger: CATTGATGGCAAGTTTGCCAGGGCACACCCTTCTCACACACACTTGCTTTTCCCCTGGTGCTCCAAACTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR CCA 72 bp | GAAAGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTaGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTG | + |
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Preference number: 3 (lower is better) Translates to: EREASHLAPGTL*ESKKGRQTSRL Trigger: CAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGTCATAGAAAACGGCTaGTTGTGTGGCATGGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: SGTRYSLGKQKGEADLKTVIENG*LCGMVH Trigger: ATGGACCATGCCACACAACAAGCCGTTTTCTATGAC...AGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| 3UTR GCA 72 bp | GCACCAGGGGAAAAGCAAGTGTGTGTGAGAAGGGTGTaGCCTGGCAAACTTGCCATCAATGGACAGTTAGAT | + |
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Preference number: 3 (lower is better) Translates to: APGEKQVCVRRV*PGKLAINGQLD Trigger: ATCTAACTGTCCATTGATGGCAAGTTTGCCAGGGCACACCCTTCTCACACACACTTGCTTTTCCCCTGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR TCA 72 bp | CTGTTCTCTGAGCAGCACAGAACAAGACGGGGCGGTTaGCAAAACAGTTCTGTTACAAAGGAGTGTCAACCC | + |
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Preference number: 3 (lower is better) Translates to: LFSEQHRTRRGG*QNSSVTKECQP Trigger: GGGTTGACACTCCTTTGTAACAGAACTGTTTTGTCAACCGCCCCGTCTTGTTCTGTGCTGCTCAGAGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR TCA 72 bp | TCTTGGTGCTCGAAGATCACTAAGGAGTCTGTTCTCTaGGCAGCACAGAACAAGACGGGGCGGTTGACAAAA | + |
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Preference number: 3 (lower is better) Translates to: SWCSKITKESVL*AAQNKTGRLTK Trigger: TTTTGTCAACCGCCCCGTCTTGTTCTGTGCTGCTCAGAGAACAGACTCCTTAGTGATCTTCGAGCACCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR-3UTR CAA 90 bp | AGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGAAGAAAAGAAGGGTGTaGGCCACAGAAGAGCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: REASHLAPGTLWESKKGRKKRRV*ATEELK Trigger: TTTTAGCTCTTCTGTGGCCAACACCCTTCTTTTCTT...CCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| 3UTR-3UTR CAA 90 bp | GCTTGTCCCATGAGCTCAGGACAGTTTGGAGCACCAGGGGAAAAGCAAGTGTGTGTGGGAAGAGAGACATaGAGTTGTCATAAGATTACC | + |
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Preference number: 3 (lower is better) Translates to: ACPMSSGQFGAPGEKQVCVGRET*SCHKIT Trigger: GGTAATCTTATGACAACTCAATGTCTCTCTTCCCAC...ACACACTTGCTTTTCCCCTGGTGCTCCAAACTGTCCTGAGCTCATGGGACAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR CCA 72 bp | AGGGGAAAAGCAAGTGTGTGTGAGAAGGGTGTGCCCTaGCAAACTTGCCATCAATGGACAGTTAGATACATA | + |
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Preference number: 3 (lower is better) Translates to: RGKASVCEKGVP*QTCHQWTVRYI Trigger: TATGTATCTAACTGTCCATTGATGGCAAGTTTGCCAGGGCACACCCTTCTCACACACACTTGCTTTTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR-3UTR CAA 90 bp | GACGGGGCGGTTGACAAAACAGTTCTGTTACAAAGGAGTGTCAACCCTGAGCTTTGGAGAAAGAAGAGATaGTTACCACTGAAGATGACT | + |
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Preference number: 3 (lower is better) Translates to: DGAVDKTVLLQRSVNPELWRKKR*LPLKMT Trigger: AGTCATCTTCAGTGGTAACAATCTCTTCTTTCTCCA...AAGCTCAGGGTTGACACTCCTTTGTAACAGAACTGTTTTGTCAACCGCCCCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR GCA 72 bp | GCAAGTGTGTGTGAGAAGGGTGTGCCCTGGCAAACTTaGCATCAATGGACAGTTAGATACATAAAAAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: ASVCEKGVPWQT*HQWTVRYIKSS Trigger: AGAACTTTTTATGTATCTAACTGTCCATTGATGGCAAGTTTGCCAGGGCACACCCTTCTCACACACACTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTGGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCATAGAAAACGGCTTGTaGTGTGGCATGGTCCATTGT | + |
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Preference number: 3 (lower is better) Translates to: SLGTKGLSKNSLWNKRGPIENGL*CGMVHC Trigger: ACAATGGACCATGCCACACAACAAGCCGTTTTCTAT...GGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACCAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| 3UTR TCA 72 bp | ATGTTAAGAGAATGCCCTTGTGATGCTGAGACCAATTaGCACAAAGAGTCAGTAACAGAACCTCATGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: MLRECPCDAETN*HKESVTEPHVW Trigger: CCACACATGAGGTTCTGTTACTGACTCTTTGTGTCAATTGGTCTCAGCATCACAAGGGCATTCTCTTAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| 3UTR CCA 72 bp | AGACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTaGCATGGTCCATTGTTCAAGAGTGTAAGAAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: RLLSCHRKRLVV*HGPLFKSVRKE Trigger: TTCTTTTCTTACACTCTTGAACAATGGACCATGCCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| 3UTR-3UTR CAA 90 bp | TGCAGCATAAAAGCAAACGACGGTAAGAAAACAATCTCTTGGTACGAAAGGTTTAAGAAAAGAAGGGTGTaGGCCACAGAAGAGCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: CSIKANDGKKTISWYERFKKRRV*ATEELK Trigger: TTTTAGCTCTTCTGTGGCCAACACCCTTCTTTTCTT...AAACCTTTCGTACCAAGAGATTGTTTTCTTACCGTCGTTTGCTTTTATGCTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| 3UTR CCA 72 bp | AGTCCTAAATTTACTATCAGTACCTTCAAATCAGTTTaGTTAGATTCCAAGACAACGGTGTATTTCCACTAC | + |
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Preference number: 3 (lower is better) Translates to: SPKFTISTFKSV*LDSKTTVYFHY Trigger: GTAGTGGAAATACACCGTTGTCTTGGAATCTAACCAAACTGATTTGAAGGTACTGATAGTAAATTTAGGACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| CDS-3UTR GCA 90 bp | GAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCCCTGACGGACCTCGCTaGAGCTCCGAGCCTTCACGT | + |
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Preference number: 4 (lower is better) Translates to: EKQAIWHPVLFGKAKRGGPDGPR*SSEPSR Trigger: ACGTGAAGGCTCGGAGCTGCAGCGAGGTCCGTCAGG...GCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR TCA 90 bp | ATTTGGGGGAGGGTCCGGAACACAGGAGCTGAGACATCTGGTTCATGTCCGTCTGGATGTCCGCCAGGCTaGATCCCTTGGCACCGTAAG | + |
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Preference number: 4 (lower is better) Translates to: IWGRVRNTGAETSGSCPSGCPPG*IPWHRK Trigger: CTTACGGTGCCAAGGGATTCAGCCTGGCGGACATCC...AGACGGACATGAACCAGATGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| CDS-3UTR GCA 90 bp | CATCACCAGTCACGTCTTGCACACCAGGCTTGTCCCATGAGCTCAGGACAGTTTCCTGACGGACCTCGCTaGAGCTCCGAGCCTTCACGT | + |
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Preference number: 4 (lower is better) Translates to: HHQSRLAHQACPMSSGQFPDGPR*SSEPSR Trigger: ACGTGAAGGCTCGGAGCTGCAGCGAGGTCCGTCAGG...AAACTGTCCTGAGCTCATGGGACAAGCCTGGTGTGCAAGACGTGACTGGTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| CDS-3UTR CCA 90 bp | CAGATAGCTGACGGAAAGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAGAGCGGGAGCAGGTTTaGGCTGGCCACAGCCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: QIADGKRSKPSGTRYSLGEREQV*AGHSPE Trigger: TTCAGGGCTGTGGCCAGCCCAAACCTGCTCCCGCTC...TCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCTTTCCGTCAGCTATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR TCA 90 bp | TGGAGCACCAGGGGAAAAGCAAGTGTGTGTGAGAAGGGTGTGCCCTGGCAAACTGTGTCCAAATCTGCCTaGTTGGCCAGGCAGCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: WSTRGKASVCEKGVPWQTVSKSA*LARQPF Trigger: GAAGGGCTGCCTGGCCAATCAGGCAGATTTGGACAC...AGTTTGCCAGGGCACACCCTTCTCACACACACTTGCTTTTCCCCTGGTGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| CDS-3UTR TCA 90 bp | AGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGGGCTGGCCACAGCCCTaGAAGACCTTTGCTGACACC | + |
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Preference number: 4 (lower is better) Translates to: REASHLAPGTLWESKKGRGWPQP*KTFADT Trigger: GGTGTCAGCAAAGGTCTTTCAGGGCTGTGGCCAGCC...CCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR TCA 90 bp | CAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCAGACCTAGTACAGCATCTTCATaGGAGCCCGGATGCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QAIWHPVLFGKAKRGGRPSTASS*EPGCSQ Trigger: CTGGCTGCATCCGGGCTCTCATGAAGATGCTGTACT...AGGTCTGCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR TCA 90 bp | GAAAGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGACCACTGCCGCTGCCTaGGCCACTGGATTCATCGCT | + |
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Preference number: 4 (lower is better) Translates to: EREASHLAPGTLWESKKGTTAAA*ATGFIA Trigger: AGCGATGAATCCAGTGGCTCAGGCAGCGGCAGTGGT...CCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR GCA 90 bp | GAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCATTCCTGAGGGCAGATaGGTAAGTGCTCCCCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: EKQAIWHPVLFGKAKRGGIPEGR*VSAPLR Trigger: TCGCAGGGGAGCACTTACGCATCTGCCCTCAGGAAT...GCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR GCA 90 bp | TGGAGCACCAGGGGAAAAGCAAGTGTGTGTGAGAAGGGTGTGCCCTGGCAAACTGACACACATCATCCATaGAACCACTGCCGCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: WSTRGKASVCEKGVPWQTDTHHP*NHCRCL Trigger: CAGGCAGCGGCAGTGGTTGCATGGATGATGTGTGTC...AGTTTGCCAGGGCACACCCTTCTCACACACACTTGCTTTTCCCCTGGTGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| CDS-3UTR GCA 90 bp | AGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCAGACGCAGGGCCAAGACCATaGAGACCAGAGACCAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SKPSGTRYSLGKQKGEADAGPRP*RPETRK Trigger: TTTCCTGGTCTCTGGTCTGCATGGTCTTGGCCCTGC...GTCTGCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CCA 90 bp | AGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCAGACCCTTGGAAACTCGGTTaGCAACCTCTCTGCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: SKPSGTRYSLGKQKGEADPWKLG*QPLCPL Trigger: CAGTGGGCAGAGAGGTTGCCAACCGAGTTTCCAAGG...GTCTGCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CCA 90 bp | ATTTGGGGGAGGGTCCGGAACACAGGAGCTGAGACATCTGGTTCATGTCCGTCTAGCACTCCTCCTCGTTaGAGGTTCCTGCTGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: IWGRVRNTGAETSGSCPSSTPPR*RFLLSH Trigger: GTGTGACAGCAGGAACCTCCAACGAGGAGGAGTGCT...AGACGGACATGAACCAGATGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| CDS-3UTR TCA 90 bp | AGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGAGTACAGCATCTTCATaGGAGCCCGGATGCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: REASHLAPGTLWESKKGRSTASS*EPGCSQ Trigger: CTGGCTGCATCCGGGCTCTCATGAAGATGCTGTACT...CCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR TCA 90 bp | GAAAGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGGTGTCCAAATCTGCCTaGTTGGCCAGGCAGCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: EREASHLAPGTLWESKKGVSKSA*LARQPF Trigger: GAAGGGCTGCCTGGCCAATCAGGCAGATTTGGACAC...CCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR TCA 90 bp | GACGGGGCGGTTGACAAAACAGTTCTGTTACAAAGGAGTGTCAACCCTGAGCTTCTGAGCGAGCAGATCTaGGAGCGGGAGCAGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DGAVDKTVLLQRSVNPELLSEQI*EREQVW Trigger: CCAAACCTGCTCCCGCTCTCAGATCTGCTCGCTCAG...AAGCTCAGGGTTGACACTCCTTTGTAACAGAACTGTTTTGTCAACCGCCCCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR GCA 90 bp | AGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGTGCAACCACTGCCGCTaGCTGAGCCACTGGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: REASHLAPGTLWESKKGRCNHCR*LSHWIH Trigger: ATGAATCCAGTGGCTCAGGCAGCGGCAGTGGTTGCA...CCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGTGCAAGGTCTCACAGTaGGCAAGCCTCGGCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: REASHLAPGTLWESKKGRCKVSQ*ASLGSM Trigger: CATACTGCCGAGGCTTGCCCACTGTGAGACCTTGCA...CCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CCA 90 bp | GCTTGTCCCATGAGCTCAGGACAGTTTGGAGCACCAGGGGAAAAGCAAGTGTGTTGCCCGCTGCAGTTGTaGGTCTTTCCTCAGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACPMSSGQFGAPGEKQVCCPLQL*VFPQGC Trigger: ACAACCCTGAGGAAAGACCCACAACTGCAGCGGGCA...ACACACTTGCTTTTCCCCTGGTGCTCCAAACTGTCCTGAGCTCATGGGACAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR TCA 90 bp | AGACCTCAAGACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTGGCATGGTCGGCTGGCCACAGCCCTaGAAGACCTTTGCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: RPQDCSLVIENGLLCGMVGWPQP*KTFADT Trigger: GGTGTCAGCAAAGGTCTTTCAGGGCTGTGGCCAGCC...GACCATGCCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTCTTGAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR TCA 90 bp | CATCACCAGTCACGTCTTGCACACCAGGCTTGTCCCATGAGCTCAGGACAGTTTTCTCTTTTATGTCTGTaGCCAGCCGGTCCAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HHQSRLAHQACPMSSGQFSLLCL*PAGPSS Trigger: CGAGCTTGGACCGGCTGGTCACAGACATAAAAGAGA...AAACTGTCCTGAGCTCATGGGACAAGCCTGGTGTGCAAGACGTGACTGGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCGGTGTAGGGCAATGCTaGCCAGACCTTTTTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EKQAIWHPVLFGKAKRGGGVGQC*PDLFRE Trigger: CTCTCTAAAAAGGTCTGGTCAGCATTGCCCTACACC...GCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR GCA 90 bp | GGGCGGTTGACAAAACAGTTCTGTTACAAAGGAGTGTCAACCCTGAGCTTGGAACATCCATGCAACCACTaGCGCTGCCTGAGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRLTKQFCYKGVSTLSLEHPCNH*RCLSHW Trigger: CCAGTGGCTCAGGCAGCGGCAGTGGTTGCATGGATG...TTCCAAGCTCAGGGTTGACACTCCTTTGTAACAGAACTGTTTTGTCAACCGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCAGACCTTGGCACGTCTCCAAATaGCTTCAGCTGGTCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QAIWHPVLFGKAKRGGRPWHVSK*LQLVCV Trigger: TACACAGACCAGCTGAAGCCATTTGGAGACGTGCCA...AGGTCTGCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CCA 90 bp | TCACAGAAAAGCTCACTCCAGGAGTTGGCTGTCAGTGCCAAGCCTGATAGCATGCCTTGGAAACTCGGTTaGCAACCTCTCTGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SQKSSLQELAVSAKPDSMPWKLG*QPLCPL Trigger: CAGTGGGCAGAGAGGTTGCCAACCGAGTTTCCAAGG...CATGCTATCAGGCTTGGCACTGACAGCCAACTCCTGGAGTGAGCTTTTCTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGTGCCCGCTGCAGTTGTaGGTCTTTCCTCAGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EREASHLAPGTLWESKKGCPLQL*VFPQGC Trigger: ACAACCCTGAGGAAAGACCCACAACTGCAGCGGGCA...CCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGTCTGATGAAAGTGTCTaGCCGCGTGATGTCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: REASHLAPGTLWESKKGRSDESV*PRDVHL Trigger: GAGGTGGACATCACGCGGCCAGACACTTTCATCAGA...CCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| 3UTR CAA 72 bp | GGAAAGAGAAGCAAGCCATCTGGCACCCGGTACTCTTaGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GKRSKPSGTRYS*GKQKGEADLKT Trigger: AGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGCAGCAGGTATATTCCTaGGGGCAGATGCGTAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EREASHLAPGTLWESKKGQQVYS*GQMRKC Trigger: GCACTTACGCATCTGCCCTCAGGAATATACCTGCTG...CCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTGGCAGCAGGTATATTCCTaGGGGCAGATGCGTAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRQTSRLLSCHRKRLVVWQQVYS*GQMRKC Trigger: GCACTTACGCATCTGCCCTCAGGAATATACCTGCTG...CCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR TCA 90 bp | GCTTGTCCCATGAGCTCAGGACAGTTTGGAGCACCAGGGGAAAAGCAAGTGTGTACCGCTTTAGCTCAGTaGAGAGGTCCTGGAATACCT | + |
|
Preference number: 4 (lower is better) Translates to: ACPMSSGQFGAPGEKQVCTALAQ*RGPGIP Trigger: AGGTATTCCAGGACCTCTTCACTGAGCTAAAGCGGT...ACACACTTGCTTTTCCCCTGGTGCTCCAAACTGTCCTGAGCTCATGGGACAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR TCA 90 bp | AGACCTCAAGACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTGGCATGGTCAAGGCGCGGGTGACCTaGATCTTCAGTTTCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPQDCSLVIENGLLCGMVKARVT*IFSFRG Trigger: GCCACGGAAACTGAAGATTCAGGTCACCCGCGCCTT...GACCATGCCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTCTTGAGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR TCA 90 bp | CTTTGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAAGGCGCGGGTGACCTaGATCTTCAGTTTCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LWESKKGRQTSRLLSCHRKARVT*IFSFRG Trigger: GCCACGGAAACTGAAGATTCAGGTCACCCGCGCCTT...TCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCTATTGGGTCCATGACTaGCTCAATGTTGAATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EKQAIWHPVLFGKAKRGGYWVHD*LNVEWP Trigger: GGGCCATTCAACATTGAGTCAGTCATGGACCCAATA...GCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR TCA 90 bp | CAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCAGACCTTATTGGGTCCATGACTaGCTCAATGTTGAATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QAIWHPVLFGKAKRGGRPYWVHD*LNVEWP Trigger: GGGCCATTCAACATTGAGTCAGTCATGGACCCAATA...AGGTCTGCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCAAAATTTTCTGGAGCTaGGCGAGCAGATCTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EKQAIWHPVLFGKAKRGGKIFWS*ASRSES Trigger: GCTCTCAGATCTGCTCGCTCAGCTCCAGAAAATTTT...GCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR GCA 90 bp | GACGGGGCGGTTGACAAAACAGTTCTGTTACAAAGGAGTGTCAACCCTGAGCTTCTCAGTGTCCAAATCTaGCTGATTGGCCAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DGAVDKTVLLQRSVNPELLSVQI*LIGQAA Trigger: GGCTGCCTGGCCAATCAGGCAGATTTGGACACTGAG...AAGCTCAGGGTTGACACTCCTTTGTAACAGAACTGTTTTGTCAACCGCCCCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR GCA 90 bp | GAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCACCTTTGCTGACACCTaGATGCTGTTTTCCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: EKQAIWHPVLFGKAKRGGTFADT*MLFSCM Trigger: CATGCAGGAAAACAGCATGCAGGTGTCAGCAAAGGT...GCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR GCA 90 bp | GACGGGGCGGTTGACAAAACAGTTCTGTTACAAAGGAGTGTCAACCCTGAGCTTGCAGGGCCAAGACCATaGAGACCAGAGACCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DGAVDKTVLLQRSVNPELAGPRP*RPETRK Trigger: TTTCCTGGTCTCTGGTCTGCATGGTCTTGGCCCTGC...AAGCTCAGGGTTGACACTCCTTTGTAACAGAACTGTTTTGTCAACCGCCCCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR CCA 90 bp | ATTTGGGGGAGGGTCCGGAACACAGGAGCTGAGACATCTGGTTCATGTCCGTCTGTGGTCCTCACAAAGTaGCTTGTCTCTTCTACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IWGRVRNTGAETSGSCPSVVLTK*LVSSTR Trigger: CCTTGTAGAAGAGACAAGCCACTTTGTGAGGACCAC...AGACGGACATGAACCAGATGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCGTGGTCCTCACAAAGTaGCTTGTCTCTTCTACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKQAIWHPVLFGKAKRGGVVLTK*LVSSTR Trigger: CCTTGTAGAAGAGACAAGCCACTTTGTGAGGACCAC...GCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CCA 90 bp | GCTTGTCCCATGAGCTCAGGACAGTTTGGAGCACCAGGGGAAAAGCAAGTGTGTTGGCACGTCTCCAAATaGCTTCAGCTGGTCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ACPMSSGQFGAPGEKQVCWHVSK*LQLVCV Trigger: TACACAGACCAGCTGAAGCCATTTGGAGACGTGCCA...ACACACTTGCTTTTCCCCTGGTGCTCCAAACTGTCCTGAGCTCATGGGACAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR TCA 90 bp | GAAAGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGACCGCTTTAGCTCAGTaGAGAGGTCCTGGAATACCT | + |
|
Preference number: 4 (lower is better) Translates to: EREASHLAPGTLWESKKGTALAQ*RGPGIP Trigger: AGGTATTCCAGGACCTCTTCACTGAGCTAAAGCGGT...CCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR TCA 90 bp | GGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCCACAGACTGAGCGAGCAGATCTaGGAGCGGGAGCAGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTKGLSKNSLWNKRGPHRLSEQI*EREQVW Trigger: CCAAACCTGCTCCCGCTCTCAGATCTGCTCGCTCAG...TCTGTGGGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTGGGGTGTAGGGCAATGCTaGCCAGACCTTTTTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRQTSRLLSCHRKRLVVWGVGQC*PDLFRE Trigger: CTCTCTAAAAAGGTCTGGTCAGCATTGCCCTACACC...CCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR TCA 90 bp | GGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCCACAGAACCACTGCCGCTGCCTaGGCCACTGGATTCATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTKGLSKNSLWNKRGPHRTTAAA*ATGFIA Trigger: AGCGATGAATCCAGTGGCTCAGGCAGCGGCAGTGGT...TCTGTGGGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR GCA 90 bp | AGACCTCAAGACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTGGCATGGTCATTCCTGAGGGCAGATaGGTAAGTGCTCCCCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RPQDCSLVIENGLLCGMVIPEGR*VSAPLR Trigger: TCGCAGGGGAGCACTTACGCATCTGCCCTCAGGAAT...GACCATGCCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTCTTGAGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR GCA 90 bp | GACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTGGCATGGTCCATTGTTCACAAGCTCGTGCCCGCTaGAGTTGTGGGTCTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DCSLVIENGLLCGMVHCSQARAR*SCGSFL Trigger: GAGGAAAGACCCACAACTGCAGCGGGCACGAGCTTG...TGAACAATGGACCATGCCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR GCA 90 bp | TGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAAACAAGCTCGTGCCCGCTaGAGTTGTGGGTCTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WESKKGRQTSRLLSCHRKQARAR*SCGSFL Trigger: GAGGAAAGACCCACAACTGCAGCGGGCACGAGCTTG...TTTTCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR GCA 90 bp | CTTTGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGATGCAACCACTGCCGCTaGCTGAGCCACTGGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWESKKGRQTSRLLSCHRCNHCR*LSHWIH Trigger: ATGAATCCAGTGGCTCAGGCAGCGGCAGTGGTTGCA...TCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CCA 90 bp | ATTTGGGGGAGGGTCCGGAACACAGGAGCTGAGACATCTGGTTCATGTCCGTCTCCAAATGGCTTCAGCTaGTCTGTGTACTTGCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: IWGRVRNTGAETSGSCPSPNGFS*SVYLLT Trigger: TGTAAGCAAGTACACAGACCAGCTGAAGCCATTTGG...AGACGGACATGAACCAGATGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR CCA 90 bp | TCACAGAAAAGCTCACTCCAGGAGTTGGCTGTCAGTGCCAAGCCTGATAGCATGCAAGCCTCGGCAGTATaGGCAGTACAGCATCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQKSSLQELAVSAKPDSMQASAV*AVQHLH Trigger: ATGAAGATGCTGTACTGCCCATACTGCCGAGGCTTG...CATGCTATCAGGCTTGGCACTGACAGCCAACTCCTGGAGTGAGCTTTTCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR TCA 90 bp | GGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTGGAAAATTTTCTGGAGCTaGGCGAGCAGATCTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRQTSRLLSCHRKRLVVWKIFWS*ASRSES Trigger: GCTCTCAGATCTGCTCGCTCAGCTCCAGAAAATTTT...CCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR GCA 90 bp | GACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTGGCATGGTCCATTGTTCACTCAGTGTCCAAATCTaGCTGATTGGCCAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DCSLVIENGLLCGMVHCSLSVQI*LIGQAA Trigger: GGCTGCCTGGCCAATCAGGCAGATTTGGACACTGAG...TGAACAATGGACCATGCCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGACCTTTGCTGACACCTaGATGCTGTTTTCCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: EREASHLAPGTLWESKKGTFADT*MLFSCM Trigger: CATGCAGGAAAACAGCATGCAGGTGTCAGCAAAGGT...CCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGCATAAAAGCAAACGACGGTAAGAAAACAATCTCTTGGTACGAAAGGTTTGCCGGTCCAAGCTCGTaGCCGCTGCAGTTGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSIKANDGKKTISWYERFAGPSS*PLQLWV Trigger: GACCCACAACTGCAGCGGGCACGAGCTTGGACCGGC...AAACCTTTCGTACCAAGAGATTGTTTTCTTACCGTCGTTTGCTTTTATGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGAATCTTCAGTTTCCGTaGCACGTCTCCAAATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: REASHLAPGTLWESKKGRNLQFP*HVSKWL Trigger: AAGCCATTTGGAGACGTGCCACGGAAACTGAAGATT...CCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CCA 90 bp | GACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTGGCATGGTCCATTGTTCATGCAAGGTCTCACAGTaGGCAAGCCTCGGCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: DCSLVIENGLLCGMVHCSCKVSQ*ASLGSM Trigger: CATACTGCCGAGGCTTGCCCACTGTGAGACCTTGCA...TGAACAATGGACCATGCCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CCA 90 bp | GACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTGGCATGGTCCATTGTTCAAGCACTCCTCCTCGTTaGAGGTTCCTGCTGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: DCSLVIENGLLCGMVHCSSTPPR*RFLLSH Trigger: GTGTGACAGCAGGAACCTCCAACGAGGAGGAGTGCT...TGAACAATGGACCATGCCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CCA 90 bp | TCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTTCATCGCTTGTGTCTTaGAAGTTGACGTCATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGTRYSLGKQKGEADLKTSSLVS*KLTSLP Trigger: TGGCAATGACGTCAACTTCCAAGACACAAGCGATGA...AGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR TCA 90 bp | CAGATAGCTGACGGAAAGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAGAGCATTGCATCTATaGAGAGATTCCACTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QIADGKRSKPSGTRYSLGRALHL*RDSTQC Trigger: ACACTGAGTGGAATCTCTTCATAGATGCAATGCTCT...TCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCTTTCCGTCAGCTATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR TCA 90 bp | AGAAAACTCGTATTTGGGGGAGGGTCCGGAACACAGGAGCTGAGACATCTGGTTTTGTGTCTTGGAAGTTaGCGTCATTGCCATTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: RKLVFGGGSGTQELRHLVLCLGS*RHCHCT Trigger: CGTACAATGGCAATGACGTCAACTTCCAAGACACAA...AACCAGATGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAATACGAGTTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| CDS-3UTR GCA 90 bp | GAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCTGCATGCTGTTTTCCTaGATGTTCATAATGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EKQAIWHPVLFGKAKRGGCMLFS*MFIMAS Trigger: TGAAGCCATTATGAACATGCAGGAAAACAGCATGCA...GCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR GCA 90 bp | GGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCCACAGAGACACACATCATCCATaGAACCACTGCCGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTKGLSKNSLWNKRGPHRDTHHP*NHCRCL Trigger: CAGGCAGCGGCAGTGGTTGCATGGATGATGTGTGTC...TCTGTGGGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CCA 90 bp | AGAAAACTCGTATTTGGGGGAGGGTCCGGAACACAGGAGCTGAGACATCTGGTTAATCTTCAGTTTCCGTaGCACGTCTCCAAATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKLVFGGGSGTQELRHLVNLQFP*HVSKWL Trigger: AAGCCATTTGGAGACGTGCCACGGAAACTGAAGATT...AACCAGATGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAATACGAGTTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR CCA 90 bp | TGCAGCATAAAAGCAAACGACGGTAAGAAAACAATCTCTTGGTACGAAAGGTTTGAGCGGGAGCAGGTTTaGGCTGGCCACAGCCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSIKANDGKKTISWYERFEREQV*AGHSPE Trigger: TTCAGGGCTGTGGCCAGCCCAAACCTGCTCCCGCTC...AAACCTTTCGTACCAAGAGATTGTTTTCTTACCGTCGTTTGCTTTTATGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CCA 90 bp | GTCAGTAAGAAAACTCGTATTTGGGGGAGGGTCCGGAACACAGGAGCTGAGACATCATCGCTTGTGTCTTaGAAGTTGACGTCATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSKKTRIWGRVRNTGAETSSLVS*KLTSLP Trigger: TGGCAATGACGTCAACTTCCAAGACACAAGCGATGA...TGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAATACGAGTTTTCTTACTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| 3UTR CAA 72 bp | AAACCTCGCTTGTCACAGAAAAGCTCACTCCAGGAGTaGGCTGTCAGTGCCAAGCCTGATAGCATGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KPRLSQKSSLQE*AVSAKPDSMKV Trigger: AACTTTCATGCTATCAGGCTTGGCACTGACAGCCAACTCCTGGAGTGAGCTTTTCTGTGACAAGCGAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| CDS-3UTR TCA 90 bp | TGCAGCATAAAAGCAAACGACGGTAAGAAAACAATCTCTTGGTACGAAAGGTTTGGATGTCCGCCAGGCTaGATCCCTTGGCACCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSIKANDGKKTISWYERFGCPPG*IPWHRK Trigger: CTTACGGTGCCAAGGGATTCAGCCTGGCGGACATCC...AAACCTTTCGTACCAAGAGATTGTTTTCTTACCGTCGTTTGCTTTTATGCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR TCA 90 bp | CTTTGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGATCTCTTTTATGTCTGTaGCACTGTGCTGCATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LWESKKGRQTSRLLSCHRSLLCL*HCAAWS Trigger: GGACCATGCAGCACAGTGTCACAGACATAAAAGAGA...TCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125435.2 |
||
| CDS-3UTR GCA 90 bp | GACGGGGCGGTTGACAAAACAGTTCTGTTACAAAGGAGTGTCAACCCTGAGCTTCTTCCATTTCTGTGGTaGAGCAGGTATATTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGAVDKTVLLQRSVNPELLPFLW*SRYIPE Trigger: CTCAGGAATATACCTGCTGCACCACAGAAATGGAAG...AAGCTCAGGGTTGACACTCCTTTGTAACAGAACTGTTTTGTCAACCGCCCCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| CDS-3UTR GCA 90 bp | TGTAAACCTCGCTTGTCACAGAAAAGCTCACTCCAGGAGTTGGCTGTCAGTGCCTCATCAAATTTCTTGTaGCTCGACACAAACGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CKPRLSQKSSLQELAVSASSNFL*LDTNVV Trigger: GACCACGTTTGTGTCGAGGCACAAGAAATTTGATGA...GGCACTGACAGCCAACTCCTGGAGTGAGCTTTTCTGTGACAAGCGAGGTTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR GCA 90 bp | TGCAGCATAAAAGCAAACGACGGTAAGAAAACAATCTCTTGGTACGAAAGGTTTCATCCATGCAACCACTaGCGCTGCCTGAGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSIKANDGKKTISWYERFHPCNH*RCLSHW Trigger: CCAGTGGCTCAGGCAGCGGCAGTGGTTGCATGGATG...AAACCTTTCGTACCAAGAGATTGTTTTCTTACCGTCGTTTGCTTTTATGCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CCA 90 bp | GTCAGTAAGAAAACTCGTATTTGGGGGAGGGTCCGGAACACAGGAGCTGAGACATGTCTTCCATTTCTGTaGTGCAGCAGGTATATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSKKTRIWGRVRNTGAETCLPFL*CSRYIP Trigger: AGGAATATACCTGCTGCACCACAGAAATGGAAGACA...TGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAATACGAGTTTTCTTACTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR TCA 90 bp | TGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAAACTGAAAGACCTTTGCTaGCACCTGCATGCTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WESKKGRQTSRLLSCHRKLKDLC*HLHAVF Trigger: GAAAACAGCATGCAGGTGTCAGCAAAGGTCTTTCAG...TTTTCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR GCA 90 bp | TGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAAAGCTGGTCTGTGTACTTaGTTACACACTCCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: WESKKGRQTSRLLSCHRKAGLCT*LHTPGS Trigger: ACTACCTGGAGTGTGTAAGCAAGTACACAGACCAGC...TTTTCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGTAAGAAAACTCGTATTTGGGGGAGGGTCCGGAACACAGGAGCTGAGACATGCATGCTGTTTTCCTaGATGTTCATAATGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSKKTRIWGRVRNTGAETCMLFS*MFIMAS Trigger: TGAAGCCATTATGAACATGCAGGAAAACAGCATGCA...TGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAATACGAGTTTTCTTACTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| CDS-3UTR CCA 90 bp | GGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCCACAGACAAGCCTCGGCAGTATaGGCAGTACAGCATCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTKGLSKNSLWNKRGPHRQASAV*AVQHLH Trigger: ATGAAGATGCTGTACTGCCCATACTGCCGAGGCTTG...TCTGTGGGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CCA 90 bp | CTTTGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGATCAGGATTGTTGATTTaGTTGGTCAGCCCATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWESKKGRQTSRLLSCHRSGLLI*LVSPSF Trigger: GAACGATGGGCTGACCAACCAAATCAACAATCCTGA...TCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CCA 90 bp | TCTCTTGGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCTCTGATGAAAGTGTCTaGCCGCGTGATGTCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLGTKGLSKNSLWNKRGPSDESV*PRDVHL Trigger: GAGGTGGACATCACGCGGCCAGACACTTTCATCAGA...GGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACCAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR TCA 90 bp | TGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAAAGTCCTGGAATACCTCTaGATTCTGCATGTACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WESKKGRQTSRLLSCHRKVLEYL*ILHVQH Trigger: ATGCTGTACATGCAGAATTCAGAGGTATTCCAGGAC...TTTTCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR TCA 90 bp | CTTTGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAGAGCATTGCATCTATaGAGAGATTCCACTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LWESKKGRQTSRLLSCHRRALHL*RDSTQC Trigger: ACACTGAGTGGAATCTCTTCATAGATGCAATGCTCT...TCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR TCA 90 bp | TGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAAATTGTGTCTTGGAAGTTaGCGTCATTGCCATTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: WESKKGRQTSRLLSCHRKLCLGS*RHCHCT Trigger: CGTACAATGGCAATGACGTCAACTTCCAAGACACAA...TTTTCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CCA 90 bp | GGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCCACAGATCAGGATTGTTGATTTaGTTGGTCAGCCCATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTKGLSKNSLWNKRGPHRSGLLI*LVSPSF Trigger: GAACGATGGGCTGACCAACCAAATCAACAATCCTGA...TCTGTGGGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CCA 90 bp | GGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCCACAGACATTCTTCAGTTTGTTaGTCATCACACGGAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTKGLSKNSLWNKRGPHRHSSVC*SSHGEP Trigger: TGGCTCTCCGTGTGATGACCAACAAACTGAAGAATG...TCTGTGGGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| 3UTR CAA 72 bp | TGTCATAGAAAACGGCTTGTTGTGTGGCATGGTCCATaGTTCAAGAGTGTAAGAAAAGAAGGGTGTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CHRKRLVVWHGP*FKSVRKEGCWP Trigger: TGGCCAACACCCTTCTTTTCTTACACTCTTGAACAATGGACCATGCCACACAACAAGCCGTTTTCTATGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| 3UTR CAA 72 bp | GACATCTGGTTCATGTCCGTCTGGAGAAAGAAGAGATaGTTACCACTGAAGATGACTTTTGAGTCAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: DIWFMSVWRKKR*LPLKMTFESRP Trigger: AGGTCTTGACTCAAAAGTCATCTTCAGTGGTAACAATCTCTTCTTTCTCCAGACGGACATGAACCAGATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| CDS-3UTR TCA 90 bp | TGCAGCATAAAAGCAAACGACGGTAAGAAAACAATCTCTTGGTACGAAAGGTTTCTGAAAGACCTTTGCTaGCACCTGCATGCTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSIKANDGKKTISWYERFLKDLC*HLHAVF Trigger: GAAAACAGCATGCAGGTGTCAGCAAAGGTCTTTCAG...AAACCTTTCGTACCAAGAGATTGTTTTCTTACCGTCGTTTGCTTTTATGCTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR GCA 90 bp | TCTCTTGGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCTCATCAAATTTCTTGTaGCTCGACACAAACGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLGTKGLSKNSLWNKRGPSSNFL*LDTNVV Trigger: GACCACGTTTGTGTCGAGGCACAAGAAATTTGATGA...GGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACCAAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CCA 90 bp | TCTCTTGGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCTGTCTTCCATTTCTGTaGTGCAGCAGGTATATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLGTKGLSKNSLWNKRGPCLPFL*CSRYIP Trigger: AGGAATATACCTGCTGCACCACAGAAATGGAAGACA...GGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACCAAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| 3UTR CAA 72 bp | ACGACGGTAAGAAAACAATCTCTTGGTACGAAAGGTTaGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TTVRKQSLGTKG*SKNSLWNKRGP Trigger: GGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACCAAGAGATTGTTTTCTTACCGTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CCA 90 bp | TGCAGCATAAAAGCAAACGACGGTAAGAAAACAATCTCTTGGTACGAAAGGTTTCATTCTTCAGTTTGTTaGTCATCACACGGAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSIKANDGKKTISWYERFHSSVC*SSHGEP Trigger: TGGCTCTCCGTGTGATGACCAACAAACTGAAGAATG...AAACCTTTCGTACCAAGAGATTGTTTTCTTACCGTCGTTTGCTTTTATGCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR GCA 90 bp | CAAAGGAGTGTCAACCCTGAGCTTGGAATTAAGAAGTTAAAATCTGTGATTTATGCTGGTCTGTGTACTTaGTTACACACTCCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRSVNPELGIKKLKSVIYAGLCT*LHTPGS Trigger: ACTACCTGGAGTGTGTAAGCAAGTACACAGACCAGC...ATAAATCACAGATTTTAACTTCTTAATTCCAAGCTCAGGGTTGACACTCCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| CDS CCA 90 bp | GAGCCCGGATGCAGCCAGGGGTGGGGCTCACCTTGGAAACTCGGTTaGCAACCTCTCTGCCCACTGTCAGGCCCTGGACAAAGGTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: EPGCSQGWGSPWKLG*QPLCPLSGPGQRCE Trigger: CTCGCACCTTTGTCCAGGGCCTGACAGTGGGCAGAGAGGTTGCCAACCGAGTTTCCAAGGTGAGCCCCACCCCTGGCTGCATCCGGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS TCA 90 bp | GTAAGTGCTCCCCTGCGATCTCCTGGTAGGGGATGTCCGCCAGGCTaGATCCCTTGGCACCGTAAGCCTGACGGACCTCGCTGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSAPLRSPGRGCPPG*IPWHRKPDGPRCSS Trigger: GGAGCTGCAGCGAGGTCCGTCAGGCTTACGGTGCCAAGGGATTCAGCCTGGCGGACATCCCCTACCAGGAGATCGCAGGGGAGCACTTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS TCA 90 bp | ATTCCTCTTCTCTGCGGTCCGGGTCCACCGCCGGGGCCTCGGTGGTaGCAAACTCGAACTCCGTGGGACACACATCATCCATGCAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: IPLLCGPGPPPGPRW*QTRTPWDTHHPCNH Trigger: GTGGTTGCATGGATGATGTGTGTCCCACGGAGTTCGAGTTTGTCACCACCGAGGCCCCGGCGGTGGACCCGGACCGCAGAGAAGAGGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS GCA 90 bp | CATGGTCCTCCACACAGTCCTCAGCCGGTCCAAGCTCGTGCCCGCTaGAGTTGTGGGTCTTTCCTCAGGGTTGTAGGGCCGAAAACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HGPPHSPQPVQARAR*SCGSFLRVVGPKTG Trigger: ACCCGTTTTCGGCCCTACAACCCTGAGGAAAGACCCACAACTGCAGCGGGCACGAGCTTGGACCGGCTGAGGACTGTGTGGAGGACCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125435.2 |
||
| CDS TCA 90 bp | TCACAGTGGGCAAGCCTCGGCAGTATGGGCAGTACAGCATCTTCATaGGAGCCCGGATGCAGCCAGGGGTGGGGCTCACCTTGGAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: SQWASLGSMGSTASS*EPGCSQGWGSPWKL Trigger: GAGTTTCCAAGGTGAGCCCCACCCCTGGCTGCATCCGGGCTCTCATGAAGATGCTGTACTGCCCATACTGCCGAGGCTTGCCCACTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS TCA 90 bp | GGGCCAAGACCATGCAGACCAGAGACCAGGAAATCAAGGAGGAGCTaGACTTCGAGGCCGAAGATTCCTCTTCTCTGCGGTCCGGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPRPCRPETRKSRRS*TSRPKIPLLCGPGP Trigger: TGGACCCGGACCGCAGAGAAGAGGAATCTTCGGCCTCGAAGTTCAGCTCCTCCTTGATTTCCTGGTCTCTGGTCTGCATGGTCTTGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS GCA 90 bp | CTTCTCTTTTATGTCTGTGACCAGCCGGTCCAAGCTCGTGCCCGCTaGAGTTGTGGGTCTTTCCTCAGGGTTGTAGGGCCGAAAACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLFYVCDQPVQARAR*SCGSFLRVVGPKTG Trigger: ACCCGTTTTCGGCCCTACAACCCTGAGGAAAGACCCACAACTGCAGCGGGCACGAGCTTGGACCGGCTGGTCACAGACATAAAAGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 |
||
| CDS-3UTR CAA 90 bp | AGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGTCGTGCCCGCTGCAGTaGTGGGTCTTTCCTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: REASHLAPGTLWESKKGRSCPLQ*WVFPQG Trigger: ACCCTGAGGAAAGACCCACAACTGCAGCGGGCACGA...CCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CAA 90 bp | CAGATAGCTGACGGAAAGAGAAGCAAGCCATCTGGCACCCGGTACTCTTTGGGATCGTGCCCGCTGCAGTaGTGGGTCTTTCCTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QIADGKRSKPSGTRYSLGSCPLQ*WVFPQG Trigger: ACCCTGAGGAAAGACCCACAACTGCAGCGGGCACGA...TCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCTTTCCGTCAGCTATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS CCA 90 bp | GGCGCGGGTGACCTGAATCTTCAGTTTCCGTGGCACGTCTCCAAATaGCTTCAGCTGGTCTGTGTACTTGCTTACACACTCCAGGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GAGDLNLQFPWHVSK*LQLVCVLAYTLQVV Trigger: GACTACCTGGAGTGTGTAAGCAAGTACACAGACCAGCTGAAGCCATTTGGAGACGTGCCACGGAAACTGAAGATTCAGGTCACCCGCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS TCA 90 bp | GAACTCCGTGGGACACACATCATCCATGCAACCACTGCCGCTGCCTaGGCCACTGGATTCATCGCTTGTGTCTTGGAAGTTGACGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: ELRGTHIIHATTAAA*ATGFIACVLEVDVI Trigger: AATGACGTCAACTTCCAAGACACAAGCGATGAATCCAGTGGCTCAGGCAGCGGCAGTGGTTGCATGGATGATGTGTGTCCCACGGAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTCGAGCCCAGAAGTCATaGAGCATCTCTTCCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGTRYSLGKQKGEADLKTRAQKS*SISSRL Trigger: CAACCTGGAAGAGATGCTCAATGACTTCTGGGCTCG...AGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCAGACCTACCTCCACCTCAGGATaGTTGATTTGGTTGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QAIWHPVLFGKAKRGGRPTSTSG*LIWLVS Trigger: GCTGACCAACCAAATCAACAATCCTGAGGTGGAGGT...AGGTCTGCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS GCA 90 bp | TTTTTAGAGAGCTTCAGCTTCTCTTTTATGTCTGTGACACTGTGCTaGATGGTCCTCCACACAGTCCTCAGCCGGTCCAAGCTCGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLESFSFSFMSVTLC*MVLHTVLSRSKLVP Trigger: GGGCACGAGCTTGGACCGGCTGAGGACTGTGTGGAGGACCATGCAGCACAGTGTCACAGACATAAAAGAGAAGCTGAAGCTCTCTAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125435.2 |
||
| CDS-3UTR CAA 90 bp | ATTTGGGGGAGGGTCCGGAACACAGGAGCTGAGACATCTGGTTCATGTCCGTCTATGGCTTCAGAGATCTaGACGTCTATTGGGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: IWGRVRNTGAETSGSCPSMASEI*TSIGSM Trigger: CATGGACCCAATAGACGTCAAGATCTCTGAAGCCAT...AGACGGACATGAACCAGATGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR CAA 90 bp | GTCAGTAAGAAAACTCGTATTTGGGGGAGGGTCCGGAACACAGGAGCTGAGACAAGCCCTGAAAGACCTTaGCTGACACCTGCATGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VSKKTRIWGRVRNTGAETSPERP*LTPACC Trigger: ACAGCATGCAGGTGTCAGCAAAGGTCTTTCAGGGCT...TGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAATACGAGTTTTCTTACTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR CAA 90 bp | CAAGCCATCTGGCACCCGGTACTCTTTGGGAAAGCAAAAAGGGGAGGCAGACCTTTCATCGCTTGTGTCTaGGAAGTTGACGTCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QAIWHPVLFGKAKRGGRPFIACV*EVDVIA Trigger: GGCAATGACGTCAACTTCCAAGACACAAGCGATGAA...AGGTCTGCCTCCCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS GCA 90 bp | ACCTTTTTAGAGAGCTTCAGCTTCTCTTTTATGTCTGTGACACTGTaGTGCATGGTCCTCCACACAGTCCTCAGCCGGTCCAAGCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TFLESFSFSFMSVTL*CMVLHTVLSRSKLV Trigger: CACGAGCTTGGACCGGCTGAGGACTGTGTGGAGGACCATGCAGCACAGTGTCACAGACATAAAAGAGAAGCTGAAGCTCTCTAAAAAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125435.2 |
||
| CDS-3UTR CAA 90 bp | GGGCGGTTGACAAAACAGTTCTGTTACAAAGGAGTGTCAACCCTGAGCTTGGAAACCTTGGAAACTCGGTaGGCAACCTCTCTGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GRLTKQFCYKGVSTLSLETLETR*ATSLPT Trigger: AGTGGGCAGAGAGGTTGCCAACCGAGTTTCCAAGGT...TTCCAAGCTCAGGGTTGACACTCCTTTGTAACAGAACTGTTTTGTCAACCGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR CAA 90 bp | TCACAGAAAAGCTCACTCCAGGAGTTGGCTGTCAGTGCCAAGCCTGATAGCATGACCTCCACCTCAGGATaGTTGATTTGGTTGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQKSSLQELAVSAKPDSMTSTSG*LIWLVS Trigger: GCTGACCAACCAAATCAACAATCCTGAGGTGGAGGT...CATGCTATCAGGCTTGGCACTGACAGCCAACTCCTGGAGTGAGCTTTTCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTGGGCATTCTTCAGTTTGTaGGTCATCACACGGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRQTSRLLSCHRKRLVVWAFFSL*VITRRA Trigger: GGCTCTCCGTGTGATGACCAACAAACTGAAGAATGC...CCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS GCA 90 bp | ACTCCAGTTTACTCTGTTGACTCAGCTTGTCTTCCATTTCTGTGGTaGAGCAGGTATATTCCTGAGGGCAGATGCGTAAGTGCTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPVYSVDSACLPFLW*SRYIPEGRCVSAPL Trigger: CAGGGGAGCACTTACGCATCTGCCCTCAGGAATATACCTGCTGCACCACAGAAATGGAAGACAAGCTGAGTCAACAGAGTAAACTGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CAA 90 bp | CTTTGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGACGAGCCCAGAAGTCATaGAGCATCTCTTCCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LWESKKGRQTSRLLSCHRRAQKS*SISSRL Trigger: CAACCTGGAAGAGATGCTCAATGACTTCTGGGCTCG...TCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAGCCCTGAAAGACCTTaGCTGACACCTGCATGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LWESKKGRQTSRLLSCHRSPERP*LTPACC Trigger: ACAGCATGCAGGTGTCAGCAAAGGTCTTTCAGGGCT...TCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CAA 90 bp | GGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAAACGGCTTGTTGTGTGGTACGCATTCTTCAGTTaGTTGGTCATCACACGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRQTSRLLSCHRKRLVVWYAFFS*LVITRR Trigger: TCTCCGTGTGATGACCAACAAACTGAAGAATGCGTA...CCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CAA 90 bp | GTCAGTAAGAAAACTCGTATTTGGGGGAGGGTCCGGAACACAGGAGCTGAGACACTTGTGTCTTGGAAGTaGACGTCATTGCCATTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VSKKTRIWGRVRNTGAETLVSWK*TSLPLY Trigger: GTACAATGGCAATGACGTCAACTTCCAAGACACAAG...TGTCTCAGCTCCTGTGTTCCGGACCCTCCCCCAAATACGAGTTTTCTTACTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
||
| CDS TCA 90 bp | TCCTGCTGTCACACGTTCGTCCTTGCAGATGGTGTAGGGCAATGCTaGCCAGACCTTTTTAGAGAGCTTCAGCTTCTCTTTTATGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SCCHTFVLADGVGQC*PDLFRELQLLFYVC Trigger: ACAGACATAAAAGAGAAGCTGAAGCTCTCTAAAAAGGTCTGGTCAGCATTGCCCTACACCATCTGCAAGGACGAACGTGTGACAGCAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAGGATTGTTGATTTGGTaGGTCAGCCCATCGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LWESKKGRQTSRLLSCHRGLLIW*VSPSFM Trigger: CATGAACGATGGGCTGACCAACCAAATCAACAATCC...TCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CAA 90 bp | TGCAGCATAAAAGCAAACGACGGTAAGAAAACAATCTCTTGGTACGAAAGGTTTACCTTGGAAACTCGGTaGGCAACCTCTCTGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: CSIKANDGKKTISWYERFTLETR*ATSLPT Trigger: AGTGGGCAGAGAGGTTGCCAACCGAGTTTCCAAGGT...AAACCTTTCGTACCAAGAGATTGTTTTCTTACCGTCGTTTGCTTTTATGCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTTGGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCGCATTCTTCAGTTTGTaGGTCATCACACGGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLGTKGLSKNSLWNKRGPAFFSL*VITRRA Trigger: GGCTCTCCGTGTGATGACCAACAAACTGAAGAATGC...GGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACCAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CAA 90 bp | TGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAAATACGCATTCTTCAGTTaGTTGGTCATCACACGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: WESKKGRQTSRLLSCHRKYAFFS*LVITRR Trigger: TCTCCGTGTGATGACCAACAAACTGAAGAATGCGTA...TTTTCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAAAGCAAAAAGGGGAGGCAGACCTCAAGACTGCTCTCTTGTCATAGAAAACTTGTGTCTTGGAAGTaGACGTCATTGCCATTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WESKKGRQTSRLLSCHRKLVSWK*TSLPLY Trigger: GTACAATGGCAATGACGTCAACTTCCAAGACACAAG...TTTTCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTCCCCTTTTTGCTTTCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CAA 90 bp | GGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCCACAGATTCATCGCTTGTGTCTaGGAAGTTGACGTCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTKGLSKNSLWNKRGPHRFIACV*EVDVIA Trigger: GGCAATGACGTCAACTTCCAAGACACAAGCGATGAA...TCTGTGGGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CAA 90 bp | TCTCTTGGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCGGATTGTTGATTTGGTaGGTCAGCCCATCGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SLGTKGLSKNSLWNKRGPGLLIW*VSPSFM Trigger: CATGAACGATGGGCTGACCAACCAAATCAACAATCC...GGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACCAAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CAA 90 bp | TCTCTTGGTACGAAAGGTTTGAGTAAGAATTCTCTCTGGAATAAACGAGGTCCCCTCAGGATTGTTGATTaGGTTGGTCAGCCCATCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLGTKGLSKNSLWNKRGPLRIVD*VGQPIV Trigger: AACGATGGGCTGACCAACCAAATCAACAATCCTGAG...GGGACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACCAAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CCA 90 bp | GCTCTCGGAAAAACTCATCAAATTTCTTGTGCCTCGACACAAACGTaGTCCTCACAAAGTGGCTTGTCTCTTCTACAAGGTTTTCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: ALGKTHQISCASTQT*SSQSGLSLLQGFQT Trigger: AGTTTGAAAACCTTGTAGAAGAGACAAGCCACTTTGTGAGGACCACGTTTGTGTCGAGGCACAAGAAATTTGATGAGTTTTTCCGAGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CCA 90 bp | TCATCAAATTTCTTGTGCCTCGACACAAACGTGGTCCTCACAAAGTaGCTTGTCTCTTCTACAAGGTTTTCAAACTCCAGTTTACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSNFLCLDTNVVLTK*LVSSTRFSNSSLLC Trigger: ACAGAGTAAACTGGAGTTTGAAAACCTTGTAGAAGAGACAAGCCACTTTGTGAGGACCACGTTTGTGTCGAGGCACAAGAAATTTGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS-3UTR CAA 90 bp | CAAAGGAGTGTCAACCCTGAGCTTGGAATTAAGAAGTTAAAATCTGTGATTTATCTCAGGATTGTTGATTaGGTTGGTCAGCCCATCGTT | + |
|
Preference number: 5 (lower is better) Translates to: QRSVNPELGIKKLKSVIYLRIVD*VGQPIV Trigger: AACGATGGGCTGACCAACCAAATCAACAATCCTGAG...ATAAATCACAGATTTTAACTTCTTAATTCCAAGCTCAGGGTTGACACTCCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088483.10 |
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| CDS TCA 72 bp | CCCCTGCGATCTCCTGGTAGGGGATGTCCGCCAGGCTaGATCCCTTGGCACCGTAAGCCTGACGGACCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: PLRSPGRGCPPG*IPWHRKPDGPR Trigger: GCGAGGTCCGTCAGGCTTACGGTGCCAAGGGATTCAGCCTGGCGGACATCCCCTACCAGGAGATCGCAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS TCA 72 bp | CTCTGCGGTCCGGGTCCACCGCCGGGGCCTCGGTGGTaGCAAACTCGAACTCCGTGGGACACACATCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LCGPGPPPGPRW*QTRTPWDTHHP Trigger: TGGATGATGTGTGTCCCACGGAGTTCGAGTTTGTCACCACCGAGGCCCCGGCGGTGGACCCGGACCGCAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CCA 72 bp | ACTCGGTTGGCAACCTCTCTGCCCACTGTCAGGCCCTaGACAAAGGTGCGAGCCGCGATGAAGGCGCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TRLATSLPTVRP*TKVRAAMKARV Trigger: CACCCGCGCCTTCATCGCGGCTCGCACCTTTGTCCAGGGCCTGACAGTGGGCAGAGAGGTTGCCAACCGAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS GCA 72 bp | CCACACAGTCCTCAGCCGGTCCAAGCTCGTGCCCGCTaGAGTTGTGGGTCTTTCCTCAGGGTTGTAGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PHSPQPVQARAR*SCGSFLRVVGP Trigger: CGGCCCTACAACCCTGAGGAAAGACCCACAACTGCAGCGGGCACGAGCTTGGACCGGCTGAGGACTGTGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125435.2 |
||
| CDS CAA 90 bp | AGAGCCCGGATGCAGCCAGGGGTGGGGCTCACCTTGGAAACTCGGTaGGCAACCTCTCTGCCCACTGTCAGGCCCTGGACAAAGGTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RARMQPGVGLTLETR*ATSLPTVRPWTKVR Trigger: TCGCACCTTTGTCCAGGGCCTGACAGTGGGCAGAGAGGTTGCCAACCGAGTTTCCAAGGTGAGCCCCACCCCTGGCTGCATCCGGGCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS TCA 72 bp | GCAAGCCTCGGCAGTATGGGCAGTACAGCATCTTCATaGGAGCCCGGATGCAGCCAGGGGTGGGGCTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: ASLGSMGSTASS*EPGCSQGWGSP Trigger: AGGTGAGCCCCACCCCTGGCTGCATCCGGGCTCTCATGAAGATGCTGTACTGCCCATACTGCCGAGGCTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS CCA 72 bp | TGCAGCCAGGGGTGGGGCTCACCTTGGAAACTCGGTTaGCAACCTCTCTGCCCACTGTCAGGCCCTGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: CSQGWGSPWKLG*QPLCPLSGPGQ Trigger: TTGTCCAGGGCCTGACAGTGGGCAGAGAGGTTGCCAACCGAGTTTCCAAGGTGAGCCCCACCCCTGGCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS CCA 72 bp | TCCTCAGCCGGTCCAAGCTCGTGCCCGCTGCAGTTGTaGGTCTTTCCTCAGGGTTGTAGGGCCGAAAACGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSAGPSSCPLQL*VFPQGCRAENG Trigger: CCCGTTTTCGGCCCTACAACCCTGAGGAAAGACCCACAACTGCAGCGGGCACGAGCTTGGACCGGCTGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125435.2 |
||
| CDS CAA 72 bp | ATGCAGCCAGGGGTGGGGCTCACCTTGGAAACTCGGTaGGCAACCTCTCTGCCCACTGTCAGGCCCTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: MQPGVGLTLETR*ATSLPTVRPWT Trigger: TGTCCAGGGCCTGACAGTGGGCAGAGAGGTTGCCAACCGAGTTTCCAAGGTGAGCCCCACCCCTGGCTGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS GCA 72 bp | TATGTCTGTGACCAGCCGGTCCAAGCTCGTGCCCGCTaGAGTTGTGGGTCTTTCCTCAGGGTTGTAGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: YVCDQPVQARAR*SCGSFLRVVGP Trigger: CGGCCCTACAACCCTGAGGAAAGACCCACAACTGCAGCGGGCACGAGCTTGGACCGGCTGGTCACAGACATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 |
||
| CDS GCA 72 bp | TGGTCCTCCACACAGTCCTCAGCCGGTCCAAGCTCGTaGCCGCTGCAGTTGTGGGTCTTTCCTCAGGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: WSSTQSSAGPSS*PLQLWVFPQGC Trigger: ACAACCCTGAGGAAAGACCCACAACTGCAGCGGGCACGAGCTTGGACCGGCTGAGGACTGTGTGGAGGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125435.2 |
||
| CDS CAA 72 bp | CAGTCCTCAGCCGGTCCAAGCTCGTGCCCGCTGCAGTaGTGGGTCTTTCCTCAGGGTTGTAGGGCCGAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: QSSAGPSSCPLQ*WVFPQGCRAEN Trigger: GTTTTCGGCCCTACAACCCTGAGGAAAGACCCACAACTGCAGCGGGCACGAGCTTGGACCGGCTGAGGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125435.2 |
||
| CDS TCA 72 bp | ACAAAGGTGCGAGCCGCGATGAAGGCGCGGGTGACCTaGATCTTCAGTTTCCGTGGCACGTCTCCAAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: TKVRAAMKARVT*IFSFRGTSPNG Trigger: GCCATTTGGAGACGTGCCACGGAAACTGAAGATTCAGGTCACCCGCGCCTTCATCGCGGCTCGCACCTTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS GCA 72 bp | GTGTCCGTTCCAGCACTCCTCCTCGTTGGAGGTTCCTaGTGTCACACGTTCGTCCTTGCAGATGGTGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSVPALLLVGGS*CHTFVLADGVG Trigger: CCCTACACCATCTGCAAGGACGAACGTGTGACAGCAGGAACCTCCAACGAGGAGGAGTGCTGGAACGGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS CAA 72 bp | CTGGCTTTGCTGTGTCCGTTCCAGCACTCCTCCTCGTaGGAGGTTCCTGCTGTCACACGTTCGTCCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LALLCPFQHSSS*EVPAVTRSSLQ Trigger: CTGCAAGGACGAACGTGTGACAGCAGGAACCTCCAACGAGGAGGAGTGCTGGAACGGACACAGCAAAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS GCA 72 bp | CCGTGGGACACACATCATCCATGCAACCACTGCCGCTaGCTGAGCCACTGGATTCATCGCTTGTGTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PWDTHHPCNHCR*LSHWIHRLCLG Trigger: TCCAAGACACAAGCGATGAATCCAGTGGCTCAGGCAGCGGCAGTGGTTGCATGGATGATGTGTGTCCCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
||
| CDS GCA 72 bp | CGAACTCCGTGGGACACACATCATCCATGCAACCACTaGCGCTGCCTGAGCCACTGGATTCATCGCTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: RTPWDTHHPCNH*RCLSHWIHRLC Trigger: ACACAAGCGATGAATCCAGTGGCTCAGGCAGCGGCAGTGGTTGCATGGATGATGTGTGTCCCACGGAGTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CCA 72 bp | GTTGCAAGGTCTCACAGTGGGCAAGCCTCGGCAGTATaGGCAGTACAGCATCTTCATGAGAGCCCGGATGCA | + |
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Preference number: 6 (lower is better) Translates to: VARSHSGQASAV*AVQHLHESPDA Trigger: TGCATCCGGGCTCTCATGAAGATGCTGTACTGCCCATACTGCCGAGGCTTGCCCACTGTGAGACCTTGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CCA 72 bp | TGGCTTTGCTGTGTCCGTTCCAGCACTCCTCCTCGTTaGAGGTTCCTGCTGTCACACGTTCGTCCTTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: WLCCVRSSTPPR*RFLLSHVRPCR Trigger: TCTGCAAGGACGAACGTGTGACAGCAGGAACCTCCAACGAGGAGGAGTGCTGGAACGGACACAGCAAAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS TCA 72 bp | GGGACACACATCATCCATGCAACCACTGCCGCTGCCTaGGCCACTGGATTCATCGCTTGTGTCTTGGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: GTHIIHATTAAA*ATGFIACVLEV Trigger: AACTTCCAAGACACAAGCGATGAATCCAGTGGCTCAGGCAGCGGCAGTGGTTGCATGGATGATGTGTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS TCA 72 bp | CCATGCAGACCAGAGACCAGGAAATCAAGGAGGAGCTaGACTTCGAGGCCGAAGATTCCTCTTCTCTGCGGT | + |
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Preference number: 6 (lower is better) Translates to: PCRPETRKSRRS*TSRPKIPLLCG Trigger: ACCGCAGAGAAGAGGAATCTTCGGCCTCGAAGTTCAGCTCCTCCTTGATTTCCTGGTCTCTGGTCTGCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS GCA 72 bp | CCTCGTTGGAGGTTCCTGCTGTCACACGTTCGTCCTTaGAGATGGTGTAGGGCAATGCTGACCAGACCTTTT | + |
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Preference number: 6 (lower is better) Translates to: PRWRFLLSHVRP*RWCRAMLTRPF Trigger: AAAAGGTCTGGTCAGCATTGCCCTACACCATCTGCAAGGACGAACGTGTGACAGCAGGAACCTCCAACGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CCA 72 bp | CCGCTGCCTGAGCCACTGGATTCATCGCTTGTGTCTTaGAAGTTGACGTCATTGCCATTGTACGCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PLPEPLDSSLVS*KLTSLPLYAFF Trigger: GAAGAATGCGTACAATGGCAATGACGTCAACTTCCAAGACACAAGCGATGAATCCAGTGGCTCAGGCAGCGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CAA 72 bp | ATCTTGACGTCTATTGGGTCCATGACTGACTCAATGTaGAATGGCCCTTCCAGTCGCTCAGCCACCAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: ILTSIGSMTDSM*NGPSSRSATKS Trigger: GCTCTTGGTGGCTGAGCGACTGGAAGGGCCATTCAACATTGAGTCAGTCATGGACCCAATAGACGTCAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CAA 90 bp | GCTTCAGAGATCTTGACGTCTATTGGGTCCATGACTGACTCAATGTaGAATGGCCCTTCCAGTCGCTCAGCCACCAAGAGCATTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: ASEILTSIGSMTDSM*NGPSSRSATKSIAS Trigger: AGATGCAATGCTCTTGGTGGCTGAGCGACTGGAAGGGCCATTCAACATTGAGTCAGTCATGGACCCAATAGACGTCAAGATCTCTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS GCA 72 bp | GAATGGCCCTTCCAGTCGCTCAGCCACCAAGAGCATTaGATCTATGAAGAGATTCCACTCAGTGTCCAAATC | + |
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Preference number: 6 (lower is better) Translates to: EWPFQSLSHQEH*IYEEIPLSVQI Trigger: GATTTGGACACTGAGTGGAATCTCTTCATAGATGCAATGCTCTTGGTGGCTGAGCGACTGGAAGGGCCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CCA 72 bp | GACCTGAATCTTCAGTTTCCGTGGCACGTCTCCAAATaGCTTCAGCTGGTCTGTGTACTTGCTTACACACTC | + |
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Preference number: 6 (lower is better) Translates to: DLNLQFPWHVSK*LQLVCVLAYTL Trigger: GAGTGTGTAAGCAAGTACACAGACCAGCTGAAGCCATTTGGAGACGTGCCACGGAAACTGAAGATTCAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS TCA 72 bp | CACACGTTCGTCCTTGCAGATGGTGTAGGGCAATGCTaGCCAGACCTTTTTAGAGAGCTTCAGCTTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: HTFVLADGVGQC*PDLFRELQLLF Trigger: AAAGAGAAGCTGAAGCTCTCTAAAAAGGTCTGGTCAGCATTGCCCTACACCATCTGCAAGGACGAACGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CAA 90 bp | CCACTGGATTCATCGCTTGTGTCTTGGAAGTTGACGTCATTGCCATaGTACGCATTCTTCAGTTTGTTGGTCATCACACGGAGAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: PLDSSLVSWKLTSLP*YAFFSLLVITRRAM Trigger: CATGGCTCTCCGTGTGATGACCAACAAACTGAAGAATGCGTACAATGGCAATGACGTCAACTTCCAAGACACAAGCGATGAATCCAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CAA 90 bp | CCTGAGCCACTGGATTCATCGCTTGTGTCTTGGAAGTTGACGTCATaGCCATTGTACGCATTCTTCAGTTTGTTGGTCATCACACGGAGA | + |
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Preference number: 6 (lower is better) Translates to: PEPLDSSLVSWKLTS*PLYAFFSLLVITRR Trigger: TCTCCGTGTGATGACCAACAAACTGAAGAATGCGTACAATGGCAATGACGTCAACTTCCAAGACACAAGCGATGAATCCAGTGGCTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS GCA 72 bp | TCCAGCAGCTCTCGGAAAAACTCATCAAATTTCTTGTaGCTCGACACAAACGTGGTCCTCACAAAGTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: SSSSRKNSSNFL*LDTNVVLTKWL Trigger: AAGCCACTTTGTGAGGACCACGTTTGTGTCGAGGCACAAGAAATTTGATGAGTTTTTCCGAGAGCTGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CAA 72 bp | CCTGAGCCACTGGATTCATCGCTTGTGTCTTGGAAGTaGACGTCATTGCCATTGTACGCATTCTTCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: PEPLDSSLVSWK*TSLPLYAFFSL Trigger: CAAACTGAAGAATGCGTACAATGGCAATGACGTCAACTTCCAAGACACAAGCGATGAATCCAGTGGCTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS TCA 72 bp | CTGAGCCACTGGATTCATCGCTTGTGTCTTGGAAGTTaGCGTCATTGCCATTGTACGCATTCTTCAGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: LSHWIHRLCLGS*RHCHCTHSSVC Trigger: ACAAACTGAAGAATGCGTACAATGGCAATGACGTCAACTTCCAAGACACAAGCGATGAATCCAGTGGCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CAA 72 bp | TGTGCCTCGACACAAACGTGGTCCTCACAAAGTGGCTaGTCTCTTCTACAAGGTTTTCAAACTCCAGTTTAC | + |
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Preference number: 6 (lower is better) Translates to: CASTQTWSSQSG*SLLQGFQTPVY Trigger: GTAAACTGGAGTTTGAAAACCTTGTAGAAGAGACAAGCCACTTTGTGAGGACCACGTTTGTGTCGAGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CAA 72 bp | TTTTCCAGCAGCTCTCGGAAAAACTCATCAAATTTCTaGTGCCTCGACACAAACGTGGTCCTCACAAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: FSSSSRKNSSNF*CLDTNVVLTKW Trigger: CCACTTTGTGAGGACCACGTTTGTGTCGAGGCACAAGAAATTTGATGAGTTTTTCCGAGAGCTGCTGGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CAA 72 bp | TCATCGCTTGTGTCTTGGAAGTTGACGTCATTGCCATaGTACGCATTCTTCAGTTTGTTGGTCATCACACGG | + |
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Preference number: 6 (lower is better) Translates to: SSLVSWKLTSLP*YAFFSLLVITR Trigger: CCGTGTGATGACCAACAAACTGAAGAATGCGTACAATGGCAATGACGTCAACTTCCAAGACACAAGCGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CAA 72 bp | CTGGATTCATCGCTTGTGTCTTGGAAGTTGACGTCATaGCCATTGTACGCATTCTTCAGTTTGTTGGTCATC | + |
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Preference number: 6 (lower is better) Translates to: LDSSLVSWKLTS*PLYAFFSLLVI Trigger: GATGACCAACAAACTGAAGAATGCGTACAATGGCAATGACGTCAACTTCCAAGACACAAGCGATGAATCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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| CDS CCA 72 bp | AAAACTCATCAAATTTCTTGTGCCTCGACACAAACGTaGTCCTCACAAAGTGGCTTGTCTCTTCTACAAGGT | + |
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Preference number: 6 (lower is better) Translates to: KTHQISCASTQT*SSQSGLSLLQG Trigger: ACCTTGTAGAAGAGACAAGCCACTTTGTGAGGACCACGTTTGTGTCGAGGCACAAGAAATTTGATGAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078849.12 ENSMUST00000088483.10 ENSMUST00000125435.2 |
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