Pregenerated sensors for GPC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022112Ensembl transcript IDs: ENSMUST00000022707.7, ENSMUST00000175665.8, ENSMUST00000176912.8
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACGAACAAATGAATGGTTaGAGGAGAGACAGACAATAT | + |
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Preference number: 2 (lower is better) Translates to: HAQTGTGNGAETVRPTVDEQMNG*RRDRQY Trigger: ATATTGTCTGTCTCTCCTTCAACCATTCATTTGTTC...GTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| 3UTR-3UTR TCA 90 bp | GAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAGTATTCAAAAACATGAATTTGAGGGCAAAGAATaGTGGTGGTTTAGGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: EWSRDCKTNCRPSIQKHEFEGKE*WWFRRG Trigger: GCCTCTCCTAAACCACCATCATTCTTTGCCCTCAAA...TTCATGTTTTTGAATACTTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| 3UTR-3UTR TCA 90 bp | AACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAGTATTTGCTACATAACCAATTaGAATTGGACTTCCTGGATT | + |
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Preference number: 2 (lower is better) Translates to: NRNREWSRDCKTNCRPSICYITN*NWTSWI Trigger: AATCCAGGAAGTCCAATTTCAATTGGTTATGTAGCA...AATACTTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| 3UTR-3UTR TCA 90 bp | CAACCCCAAATTTATTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAAAGTATTCAAAAACATaGACCTATGGGGGCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: QPQIYSIRHAQTGTGNGAKYSKT*TYGGHL Trigger: AAGATGGCCCCCATAGGTTCATGTTTTTGAATACTT...TGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAATAAATTTGGGGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| 3UTR-3UTR CCA 90 bp | AGACCAACTGTAGACCAAGTATTCAAAAACATGAACCTATGGGGGCCATCTTCAGAAAGTATTAGGAAATaGAATCATCCTAGAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: RPTVDQVFKNMNLWGPSSESIRK*NHPRGC Trigger: ACATCCTCTAGGATGATTCCATTTCCTAATACTTTC...TGAAGATGGCCCCCATAGGTTCATGTTTTTGAATACTTGGTCTACAGTTGGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR TCA 90 bp | ACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACTCCGCTTTCTCCCCTaGAGCCCTGAGGCTGAGACG | + |
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Preference number: 4 (lower is better) Translates to: TCTNRNREWSRDCKTNCRLRFLP*SPEAET Trigger: CGTCTCAGCCTCAGGGCTTCAGGGGAGAAAGCGGAG...TCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR GCA 90 bp | TTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCCTGGCAAGGGTTCGATaGGCAGGCGGCCACGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FYKTCTNRNREWSRDCKTLARVR*AGGHGK Trigger: CTTCCCGTGGCCGCCTGCGCATCGAACCCTTGCCAG...GGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR TCA 90 bp | CATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACTTGGATAGGCAAACCTaGAGATCAGGTCCTGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HAQTGTGNGAETVRPTVDLDRQT*RSGPAR Trigger: GCGGGCAGGACCTGATCTTCAGGTTTGCCTATCCAA...GTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR TCA 90 bp | CATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCCATACAGGGCTTACTaGGCATCAGGCTCTGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: HAQTGTGNGAETVRPTVDPYRAY*ASGSGS Trigger: ACTGCCAGAGCCTGATGCTCAGTAAGCCCTGTATGG...GTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR TCA 90 bp | GCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAATTCTGCCCATTGAGGTaGGCCTGCAACACGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: AQTGTGNGAETVRPTVDQFCPLR*ACNTAS Trigger: TGATGCCGTGTTGCAGGCTCACCTCAATGGGCAGAA...TTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR GCA 90 bp | CATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACAGCGACCTCCCCATCTaGCCCATGACTCTTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HAQTGTGNGAETVRPTVDSDLPI*PMTLLG Trigger: TCCCAAAAGAGTCATGGGGCAGATGGGGAGGTCGCT...GTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR TCA 90 bp | CATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACTCCGTGCATCGCATCTaGCAACTCTTCCAAAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: HAQTGTGNGAETVRPTVDSVHRI*QLFQRP Trigger: CGGTCTTTGGAAGAGTTGTCAGATGCGATGCACGGA...GTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAGTATTCAAAAACGCGGGGGCTCTGTGTTaGTGTTCTCACTGGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: TGNGAETVRPTVDQVFKNAGALC*CSHWMA Trigger: GGCCATCCAGTGAGAACACCAACACAGAGCCCCCGC...GTTTTTGAATACTTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR GCA 90 bp | ACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGATCAGGAGGGCCCTACTaGACTCCTTGGAGAAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: TCTNRNREWSRDCKTNCRSGGPY*TPWRSV Trigger: TACACTTCTCCAAGGAGTGCAGTAGGGCCCTCCTGA...TCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CCA 90 bp | ACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCCTACTGCACTCCTTaGAGAAGTGTATGTGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TCTNRNREWSRDCKTNCRPYCTP*RSVCGP Trigger: CGGACCACATACACTTCTCCAAGGAGTGCAGTAGGG...TCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CCA 90 bp | TTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCTTAAGCTCAGTCATGTaGGCCAGGCAGCCCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FYKTCTNRNREWSRDCKTLSSVM*ARQPLM Trigger: CATCAGGGGCTGCCTGGCCCACATGACTGAGCTTAA...GGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR GCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGGCATGCCGCCTCCACTaGCTGGCTGAAGGAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPACRLH*LAEGAP Trigger: GGGAGCTCCTTCAGCCAGGCAGTGGAGGCGGCATGC...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR GCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGCTGGCAAGGGTTCGATaGGCAGGCGGCCACGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPLARVR*AGGHGK Trigger: CTTCCCGTGGCCGCCTGCGCATCGAACCCTTGCCAG...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR GCA 90 bp | CATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACGACTGCATGCTTCTCTaGAGTACGCTGTATCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HAQTGTGNGAETVRPTVDDCMLL*STLYPF Trigger: AAAGGGATACAGCGTACTGCAGAGAAGCATGCAGTC...GTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR GCA 90 bp | ACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACTGATGCTGACTGCATaGTTCTCTGCAGTACGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TCTNRNREWSRDCKTNCRLMLTA*FSAVRC Trigger: ACAGCGTACTGCAGAGAAGCATGCAGTCAGCATCAG...TCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CCA 90 bp | AACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAGTATTTGCCGAGCTGCAATCTaGTACCTCTCCTCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRNREWSRDCKTNCRPSICRAAI*YLSSIF Trigger: GAAGATGGAGGAGAGGTACCAGATTGCAGCTCGGCA...AATACTTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR TCA 90 bp | AACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAGTATTGTTGAGCTGGATGTCTaGAGCACCTGCTGCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: NRNREWSRDCKTNCRPSIVELDV*STCCKS Trigger: AGATTTGCAGCAGGTGCTTCAGACATCCAGCTCAAC...AATACTTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR TCA 90 bp | TTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCTCCGTGAAAAATTCCTaGATGGAAGCAGCAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: FYKTCTNRNREWSRDCKTSVKNS*MEAAAS Trigger: GGAGGCTGCTGCTTCCATTCAGGAATTTTTCACGGA...GGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR TCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGCTCCGCTTTCTCCCCTaGAGCCCTGAGGCTGAGACG | + |
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Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPLRFLP*SPEAET Trigger: CGTCTCAGCCTCAGGGCTTCAGGGGAGAAAGCGGAG...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR GCA 90 bp | AACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAGTATTCAAATCTTGCCGAGCTaGAATCTGGTACCTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: NRNREWSRDCKTNCRPSIQILPS*NLVPLL Trigger: GAGGAGAGGTACCAGATTGCAGCTCGGCAAGATTTG...AATACTTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR GCA 90 bp | AACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAGTATTGGCGGGCCATTCGAATaGATTCTGAGTATTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: NRNREWSRDCKTNCRPSIGGPFE*ILSIAE Trigger: CTCTGCAATACTCAGAATGCATTCGAATGGCCCGCC...AATACTTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGGCGGGGGCTCTGTGTTaGTGTTCTCACTGGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKAGALC*CSHWMA Trigger: GGCCATCCAGTGAGAACACCAACACAGAGCCCCCGC...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGGGAGCTCCCACTTGTTaGGCTTGGGTGATCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKGAPTC*AWVISP Trigger: GGGGGAGATCACCCAAGCCCAACAAGTGGGAGCTCC...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGGCCGCCTCCACTGCCTaGCTGAAGGAGCTCCCACTT | + |
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Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPAASTA*LKELPL Trigger: AAGTGGGAGCTCCTTCAGCCAGGCAGTGGAGGCGGC...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR GCA 90 bp | ACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGATGTTCCGGTAGGTGTTaGAGAAAAGGATACTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TCTNRNREWSRDCKTNCRCSGRC*RKGYWC Trigger: ACACCAGTATCCTTTTCTGCAACACCTACCGGAACA...TCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CCA 90 bp | CAACCCCAAATTTATTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCACCCCCAAGCCGCCACTaGAAAAGTTTCCGAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: QPQIYSIRHAQTGTGNGAPPSRH*KSFRTS Trigger: AGAAGTTCGGAAACTTTTCCAGTGGCGGCTTGGGGG...TGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAATAAATTTGGGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CCA 90 bp | CATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACTCCCTTTTCTTCTGTTaGCAAGTGTCTCTTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: HAQTGTGNGAETVRPTVDSLFFC*QVSLHH Trigger: ATGGTGAAGAGACACTTGCCAACAGAAGAAAAGGGA...GTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR TCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGTTGGATAGGCAAACCTaGAGATCAGGTCCTGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKLDRQT*RSGPAR Trigger: GCGGGCAGGACCTGATCTTCAGGTTTGCCTATCCAA...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR TCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGTTCTGCCCATTGAGGTaGGCCTGCAACACGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKFCPLR*ACNTAS Trigger: TGATGCCGTGTTGCAGGCTCACCTCAATGGGCAGAA...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR TCA 90 bp | CAACCCCAAATTTATTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAATAATTTCTGCCCATTaGGGTGAGCCTGCAACACGG | + |
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Preference number: 4 (lower is better) Translates to: QPQIYSIRHAQTGTGNGAIISAH*GEPATR Trigger: CCGTGTTGCAGGCTCACCTCAATGGGCAGAAATTAT...TGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAATAAATTTGGGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR GCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGAGCGACCTCCCCATCTaGCCCATGACTCTTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKSDLPI*PMTLLG Trigger: TCCCAAAAGAGTCATGGGGCAGATGGGGAGGTCGCT...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAGGGAATGTTGCCAAATaGACTAACATCCTGGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: IYSIRHAQTGTGNGAETVGNVAK*TNILAG Trigger: GCCCGCCAGGATGTTAGTCCATTTGGCAACATTCCC...TACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAATAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR TCA 90 bp | AACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAGTATTCATTCGAATGCATTCTaGGTATTGCAGAGAACTGTC | + |
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Preference number: 4 (lower is better) Translates to: NRNREWSRDCKTNCRPSIHSNAF*VLQRTV Trigger: GACAGTTCTCTGCAATACTCAGAATGCATTCGAATG...AATACTTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR TCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGCCATACAGGGCTTACTaGGCATCAGGCTCTGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPPYRAY*ASGSGS Trigger: ACTGCCAGAGCCTGATGCTCAGTAAGCCCTGTATGG...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR TCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGTCCGTGCATCGCATCTaGCAACTCTTCCAAAGACCG | + |
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Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKSVHRI*QLFQRP Trigger: CGGTCTTTGGAAGAGTTGTCAGATGCGATGCACGGA...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR GCA 90 bp | ACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGATTCCATGTTTCTCTTTaGTTGGGTCAAAAGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: TCTNRNREWSRDCKTNCRFHVSL*LGQKYS Trigger: GCTGTACTTTTGACCCAAGCAAAGAGAAACATGGAA...TCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTACTTCCTGATGCTGACTaGATGCTTCTCTGCAGTACG | + |
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Preference number: 4 (lower is better) Translates to: IYSIRHAQTGTGNGAETVLPDAD*MLLCST Trigger: CGTACTGCAGAGAAGCATGCAGTCAGCATCAGGAAG...TACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAATAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGCCCCCAAGCCGCCACTaGAAAAGTTTCCGAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKPPSRH*KSFRTS Trigger: AGAAGTTCGGAAACTTTTCCAGTGGCGGCTTGGGGG...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGTGCCGAGCTGCAATCTaGTACCTCTCCTCCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKCRAAI*YLSSIF Trigger: GAAGATGGAGGAGAGGTACCAGATTGCAGCTCGGCA...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGGGGAATGTTGCCAAATaGACTAACATCCTGGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKGNVAK*TNILAG Trigger: GCCCGCCAGGATGTTAGTCCATTTGGCAACATTCCC...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGCCCTACTGCACTCCTTaGAGAAGTGTATGTGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKPYCTP*RSVCGP Trigger: CGGACCACATACACTTCTCCAAGGAGTGCAGTAGGG...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGTTAAGCTCAGTCATGTaGGCCAGGCAGCCCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPLSSVM*ARQPLM Trigger: CATCAGGGGCTGCCTGGCCCACATGACTGAGCTTAA...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR CCA 90 bp | AGACCAACTGTAGACCAAGTATTCAAAAACATGAACCTATGGGGGCCATCTTCAATGTTTCTCTTTGCTTaGGTCAAAAGTACAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPTVDQVFKNMNLWGPSSMFLFA*VKSTAG Trigger: CCCCGCTGTACTTTTGACCCAAGCAAAGAGAAACAT...TGAAGATGGCCCCCATAGGTTCATGTTTTTGAATACTTGGTCTACAGTTGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS-3UTR TCA 90 bp | ATTTATTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAGTTTCCAGGGTCTCTTaGAAAGCAGCTGCATTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: IYSIRHAQTGTGNGAETVVSRVS*KAAAFR Trigger: TCGAAATGCAGCTGCTTTTCAAGAGACCCTGGAAAC...TACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAATAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS-3UTR TCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGTCCGTGAAAAATTCCTaGATGGAAGCAGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKSVKNS*MEAAAS Trigger: GGAGGCTGCTGCTTCCATTCAGGAATTTTTCACGGA...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR TCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGATAATTTCTGCCCATTaGGGTGAGCCTGCAACACGG | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKIISAH*GEPATR Trigger: CCGTGTTGCAGGCTCACCTCAATGGGCAGAAATTAT...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR TCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGTACTTCTCCGCTTCCTaGTCCTCCACAGCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPYFSAS*SSTAIF Trigger: GAAGATGGCTGTGGAGGATCAGGAAGCGGAGAAGTA...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGTCAGGAGGGCCCTACTaGACTCCTTGGAGAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPSGGPY*TPWRSV Trigger: TACACTTCTCCAAGGAGTGCAGTAGGGCCCTCCTGA...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAGTATTCAAAAACAGCACGTTGGGTTTTTaGATAGGCAAACCTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGNGAETVRPTVDQVFKNSTLGF*IGKPED Trigger: ATCTTCAGGTTTGCCTATCCAAAAACCCAACGTGCT...GTTTTTGAATACTTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS-3UTR CCA 90 bp | GAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAGTATTCAAAAACATGAATCTCCTCCATCTTCCTaGTACAGCACGTTGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EWSRDCKTNCRPSIQKHESPPSS*YSTLGF Trigger: AAAACCCAACGTGCTGTACCAGGAAGATGGAGGAGA...TTCATGTTTTTGAATACTTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS-3UTR CCA 90 bp | AGACCAACTGTAGACCAAGTATTCAAAAACATGAACCTATGGGGGCCATCTTCAATAAGCATGCCAGTGTaGATTAAGCTCAGTCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPTVDQVFKNMNLWGPSSISMPV*IKLSHV Trigger: CACATGACTGAGCTTAATCCACACTGGCATGCTTAT...TGAAGATGGCCCCCATAGGTTCATGTTTTTGAATACTTGGTCTACAGTTGGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS-3UTR CCA 90 bp | AGACCAACTGTAGACCAAGTATTCAAAAACATGAACCTATGGGGGCCATCTTCATCATTAACAAGCAAGTaGAAGTTCAGGAGCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPTVDQVFKNMNLWGPSSSLTSK*KFRSTC Trigger: ACACGTGCTCCTGAACTTCCACTTGCTTGTTAATGA...TGAAGATGGCCCCCATAGGTTCATGTTTTTGAATACTTGGTCTACAGTTGGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS-3UTR TCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGGTTGAGCTGGATGTCTaGAGCACCTGCTGCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPVELDV*STCCKS Trigger: AGATTTGCAGCAGGTGCTTCAGACATCCAGCTCAAC...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR TCA 90 bp | AGACCAACTGTAGACCAAGTATTCAAAAACATGAACCTATGGGGGCCATCTTCACAAATCGTATTCACCTaGTCCAATAATTTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPTVDQVFKNMNLWGPSSQIVFT*SNNFCP Trigger: TGGGCAGAAATTATTGGATCAGGTGAATACGATTTG...TGAAGATGGCCCCCATAGGTTCATGTTTTTGAATACTTGGTCTACAGTTGGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS-3UTR TCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGGCTGAGCATAGCTTTTaGCTATTTCCTCCCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKAEHSF*LFPPHS Trigger: GGAATGGGGAGGAAATAGTCAAAAGCTATGCTCAGC...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGCAAATCTTGCCGAGCTaGAATCTGGTACCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPQILPS*NLVPLL Trigger: GAGGAGAGGTACCAGATTGCAGCTCGGCAAGATTTG...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR GCA 90 bp | CAACCCCAAATTTATTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAACTGGTGTAATTCTCTaGTTGTCTGATGAGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPQIYSIRHAQTGTGNGATGVIL*LSDEGF Trigger: GAAACCCTCATCAGACAAGCAGAGAATTACACCAGT...TGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAATAAATTTGGGGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGGGCGGGCCATTCGAATaGATTCTGAGTATTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPGGPFE*ILSIAE Trigger: CTCTGCAATACTCAGAATGCATTCGAATGGCCCGCC...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CCA 90 bp | CAACCCCAAATTTATTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAACTTTAATGTTGAGCTaGATGTCTGAAGCACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPQIYSIRHAQTGTGNGATLMLS*MSEAPA Trigger: AGCAGGTGCTTCAGACATCCAGCTCAACATTAAAGT...TGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAATAAATTTGGGGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGACGCACATCCGGTGCTaGTTGTATCCAGAGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPTHIRC*LYPEYF Trigger: GAAGTACTCTGGATACAACCAGCACCGGATGTGCGT...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR TCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGCTGGCATCCAGTTTGTaGTCTTCAGGGTCCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPLASSL*SSGSSL Trigger: TAAAGAGGACCCTGAAGATCACAAACTGGATGCCAG...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR GCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGTCTGCTCGATGGACTTaGTTCACATCACTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKSARWT*FTSLKF Trigger: GAACTTCAGTGATGTGAAGCAAGTCCATCGAGCAGA...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGCTCCCCCGTAACAACTaGATGACATGCTTCAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKLPRNN*MTCFSL Trigger: TAAACTGAAGCATGTCATCCAGTTGTTACGGGGGAG...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR TCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGCATTCGAATGCATTCTaGGTATTGCAGAGAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKHSNAF*VLQRTV Trigger: GACAGTTCTCTGCAATACTCAGAATGCATTCGAATG...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR TCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGCCCGTAACAACTGGATaGCATGCTTCAGTTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKPVTTG*HASVYQ Trigger: TTGATAAACTGAAGCATGTCATCCAGTTGTTACGGG...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR GCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGACTGGTGTAATTCTCTaGTTGTCTGATGAGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKTGVIL*LSDEGF Trigger: GAAACCCTCATCAGACAAGCAGAGAATTACACCAGT...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGACTTTAATGTTGAGCTaGATGTCTGAAGCACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKTLMLS*MSEAPA Trigger: AGCAGGTGCTTCAGACATCCAGCTCAACATTAAAGT...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR CCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGATAAGCATGCCAGTGTaGATTAAGCTCAGTCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKISMPV*IKLSHV Trigger: CACATGACTGAGCTTAATCCACACTGGCATGCTTAT...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR CCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGTCATTAACAAGCAAGTaGAAGTTCAGGAGCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKSLTSK*KFRSTC Trigger: ACACGTGCTCCTGAACTTCCACTTGCTTGTTAATGA...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGATGTTTCTCTTTGCTTaGGTCAAAAGTACAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPMFLFA*VKSTAG Trigger: CCCCGCTGTACTTTTGACCCAAGCAAAGAGAAACAT...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR CCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGGAAGTTCATGCTGTCTaGCATCCAGTTTGTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKEVHAV*HPVCDL Trigger: AAGATCACAAACTGGATGCCAGACAGCATGAACTTC...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| 3UTR CAA 72 bp | TCAAGAAGATCTAGTTTGAAAGAGACTATCAGAATCTaGACTGATAGGTACTGTGTGAACATTCCAGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRRSSLKETIRI*TDRYCVNIPVG Trigger: GCCAACTGGAATGTTCACACAGTACCTATCAGTCAAGATTCTGATAGTCTCTTTCAAACTAGATCTTCTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR TCA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGCAAATCGTATTCACCTaGTCCAATAATTTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: THPQMSTFTMLKGKGLIKQIVFT*SNNFCP Trigger: TGGGCAGAAATTATTGGATCAGGTGAATACGATTTG...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGAGCACGTTGGGTTTTTaGATAGGCAAACCTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPSTLGF*IGKPED Trigger: ATCTTCAGGTTTGCCTATCCAAAAACCCAACGTGCT...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGTTCCATGTTTCTCTTTaGTTGGGTCAAAAGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPFHVSL*LGQKYS Trigger: GCTGTACTTTTGACCCAAGCAAAGAGAAACATGGAA...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGATTCTTTTCTTCTGTTaGCAAGTGTCTCTTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPILFFC*QVSLHH Trigger: ATGGTGAAGAGACACTTGCCAACAGAAGAAAAGAAT...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGAACAACTGGATGACATaGTTCAGTTTATCAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPNNWMT*FSLSMI Trigger: GATCATTGATAAACTGAAGCATGTCATCCAGTTGTT...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS CCA 90 bp | GTGCGGGCATCCATCCTCGGTGTTCGGGTCGCGCCCTCCCCGCTGTaGTCCTCACTCTCCAGAGCACCCAGCATCGGCAGCGCGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VRASILGVRVAPSPL*SSLSRAPSIGSAGG Trigger: TCCTCCCGCGCTGCCGATGCTGGGTGCTCTGGAGAGTGAGGACCACAGCGGGGAGGGCGCGACCCGAACACCGAGGATGGATGCCCGCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS GCA 90 bp | CAAGGAGAGCCAGGAGAAGGAGACAGCGCCAGCCCAGACGCCAGGTaGGGGCATCCATCCTCGGTGTTCGGGTCGCGCCCTCCCCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QGEPGEGDSASPDAR*GHPSSVFGSRPPRC Trigger: ACAGCGGGGAGGGCGCGACCCGAACACCGAGGATGGATGCCCGCACCTGGCGTCTGGGCTGGCGCTGTCTCCTTCTCCTGGCTCTCCTTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS CCA 90 bp | CGCGGCGCCTCCGGCAGCCCTTTGACAGCTCCCCCAAGCCGCCACTaGAAAAGTTTCCGAACTTCTTCGCAGCTCTCCACGCCCTCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGASGSPLTAPPSRH*KSFRTSSQLSTPSL Trigger: AAGCGAGGGCGTGGAGAGCTGCGAAGAAGTTCGGAAACTTTTCCAGTGGCGGCTTGGGGGAGCTGTCAAAGGGCTGCCGGAGGCGCCGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS TCA 90 bp | AAACCTGAAGATCAGGTCCTGCCCGCGGCGCCTCCGGCAGCCCTTTaGCAGCTCCCCCAAGCCGCCACTGGAAAAGTTTCCGAACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KPEDQVLPAAPPAAL*QLPQAATGKVSELL Trigger: AAGAAGTTCGGAAACTTTTCCAGTGGCGGCTTGGGGGAGCTGTCAAAGGGCTGCCGGAGGCGCCGCGGGCAGGACCTGATCTTCAGGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS CCA 90 bp | TCTGGTACCTCTCCTCCATCTTCCTGGTACAGCACGTTGGGTTTTTaGATAGGCAAACCTGAAGATCAGGTCCTGCCCGCGGCGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SGTSPPSSWYSTLGF*IGKPEDQVLPAAPP Trigger: CGGAGGCGCCGCGGGCAGGACCTGATCTTCAGGTTTGCCTATCCAAAAACCCAACGTGCTGTACCAGGAAGATGGAGGAGAGGTACCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS CCA 90 bp | TGCATCTTCAGGAGGGCCCTACTGCACTCCTTGGAGAAGTGTATGTaGTCCGTGGTGTTGATGACCTCAATGCCCAGATTAAGCGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CIFRRALLHSLEKCM*SVVLMTSMPRLSAC Trigger: GCAGGCGCTTAATCTGGGCATTGAGGTCATCAACACCACGGACCACATACACTTCTCCAAGGAGTGCAGTAGGGCCCTCCTGAAGATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS CCA 90 bp | CATCCGGTGCTGGTTGTATCCAGAGTACTTCCATGGTCTGCTCGATaGACTTGCTTCACATCACTGAAGTTCATGCTGTCTGGCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HPVLVVSRVLPWSAR*TCFTSLKFMLSGIQ Trigger: CTGGATGCCAGACAGCATGAACTTCAGTGATGTGAAGCAAGTCCATCGAGCAGACCATGGAAGTACTCTGGATACAACCAGCACCGGATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022707.7 ENSMUST00000176912.8 |
||
| CDS CCA 90 bp | GTTCCTGACGCACATCCGGTGCTGGTTGTATCCAGAGTACTTCCATaGTCTGCTCGATGGACTTGCTTCACATCACTGAAGTTCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPDAHPVLVVSRVLP*SARWTCFTSLKFML Trigger: CAGCATGAACTTCAGTGATGTGAAGCAAGTCCATCGAGCAGACCATGGAAGTACTCTGGATACAACCAGCACCGGATGTGCGTCAGGAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022707.7 ENSMUST00000176912.8 |
||
| CDS-3UTR CAA 90 bp | GCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAGCCCTACTGCACTCCTaGGAGAAGTGTATGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQTGTGNGAETVRPTVDQALLHS*EKCMWS Trigger: GGACCACATACACTTCTCCAAGGAGTGCAGTAGGGC...TTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS TCA 90 bp | GTTCAGGAGCACGTGTTCAACGTCGTAGGTTCCGTGCATCGCATCTaGCAACTCTTCCAAAGACCGGATATAAGCATGCCAGTGTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: VQEHVFNVVGSVHRI*QLFQRPDISMPVWI Trigger: AATCCACACTGGCATGCTTATATCCGGTCTTTGGAAGAGTTGTCAGATGCGATGCACGGAACCTACGACGTTGAACACGTGCTCCTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS CCA 90 bp | GCAAATCTTGCCGAGCTGCAATCTGGTACCTCTCCTCCATCTTCCTaGTACAGCACGTTGGGTTTTTGGATAGGCAAACCTGAAGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: ANLAELQSGTSPPSS*YSTLGFWIGKPEDQ Trigger: CTGATCTTCAGGTTTGCCTATCCAAAAACCCAACGTGCTGTACCAGGAAGATGGAGGAGAGGTACCAGATTGCAGCTCGGCAAGATTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS TCA 90 bp | CATCCAGTTTGTGATCTTCAGGGTCCTCTTTACTTCTCCGCTTCCTaGTCCTCCACAGCCATCTTCGTCATCACAGTCTCCACTAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HPVCDLQGPLYFSAS*SSTAIFVITVSTRV Trigger: AACTCTAGTGGAGACTGTGATGACGAAGATGGCTGTGGAGGATCAGGAAGCGGAGAAGTAAAGAGGACCCTGAAGATCACAAACTGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022707.7 ENSMUST00000176912.8 |
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| CDS GCA 90 bp | GTGCTGGTTGTATCCAGAGTACTTCCATGGTCTGCTCGATGGACTTaGTTCACATCACTGAAGTTCATGCTGTCTGGCATCCAGTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLVVSRVLPWSARWT*FTSLKFMLSGIQFV Trigger: CACAAACTGGATGCCAGACAGCATGAACTTCAGTGATGTGAAGCAAGTCCATCGAGCAGACCATGGAAGTACTCTGGATACAACCAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022707.7 ENSMUST00000176912.8 |
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| CDS GCA 90 bp | TGTTCAGCAGTATGGATTCGAGCCAGCTTCCTGATGCTGACTGCATaGTTCTCTGCAGTACGCTGTATCCCTTTTCTTCTGTTGGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CSAVWIRASFLMLTA*FSAVRCIPFLLLAS Trigger: ACTTGCCAACAGAAGAAAAGGGATACAGCGTACTGCAGAGAAGCATGCAGTCAGCATCAGGAAGCTGGCTCGAATCCATACTGCTGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS GCA 90 bp | CTTTTGTTCAGCAGTATGGATTCGAGCCAGCTTCCTGATGCTGACTaGATGCTTCTCTGCAGTACGCTGTATCCCTTTTCTTCTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLFSSMDSSQLPDAD*MLLCSTLYPFSSVG Trigger: GCCAACAGAAGAAAAGGGATACAGCGTACTGCAGAGAAGCATGCAGTCAGCATCAGGAAGCTGGCTCGAATCCATACTGCTGAACAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS GCA 90 bp | CATGTTCCGGTAGGTGTTGCAGAAAAGGATACTGGTGTAATTCTCTaGTTGTCTGATGAGGGTTTCCAGGGTCTCTTGAAAAGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HVPVGVAEKDTGVIL*LSDEGFQGLLKSSC Trigger: GCAGCTGCTTTTCAAGAGACCCTGGAAACCCTCATCAGACAAGCAGAGAATTACACCAGTATCCTTTTCTGCAACACCTACCGGAACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS CCA 90 bp | ATGTTTCTCTTTGCTTGGGTCAAAAGTACAGCGGGGGCTCTGTGTTaGTGTTCTCACTGGATGGCCACAAATCGTATTCACCTGATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: MFLFAWVKSTAGALC*CSHWMATNRIHLIQ Trigger: TTGGATCAGGTGAATACGATTTGTGGCCATCCAGTGAGAACACCAACACAGAGCCCCCGCTGTACTTTTGACCCAAGCAAAGAGAAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS-3UTR CAA 90 bp | ACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGAGGTTTCCAGGGTCTCTaGAAAAGCAGCTGCATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: TCTNRNREWSRDCKTNCRGFQGL*KSSCIS Trigger: CGAAATGCAGCTGCTTTTCAAGAGACCCTGGAAACC...TCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS-3UTR CAA 90 bp | TTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCATGTGGTCCGTGGTGTaGATGACCTCAATGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FYKTCTNRNREWSRDCKTMWSVV*MTSMPR Trigger: TCTGGGCATTGAGGTCATCAACACCACGGACCACAT...GGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAGTATTCAAAAACCAGCCCCTGATGACATaGAGGCAGTACCCCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: TGNGAETVRPTVDQVFKNQPLMT*RQYPIQ Trigger: CTGTATGGGGTACTGCCTCAATGTCATCAGGGGCTG...GTTTTTGAATACTTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS TCA 90 bp | GCTGCATTTCGAGATATTAGCAACTTTAATGTTGAGCTGGATGTCTaGAGCACCTGCTGCAAATCTTGCCGAGCTGCAATCTGGTACCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAFRDISNFNVELDV*STCCKSCRAAIWYL Trigger: GAGGTACCAGATTGCAGCTCGGCAAGATTTGCAGCAGGTGCTTCAGACATCCAGCTCAACATTAAAGTTGCTAATATCTCGAAATGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS TCA 90 bp | GTTGCCAAATGGACTAACATCCTGGCGGGCCATTCGAATGCATTCTaGGTATTGCAGAGAACTGTCAGTCACACCAGGGTTTATAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VAKWTNILAGHSNAF*VLQRTVSHTRVYKM Trigger: CATCTTATAAACCCTGGTGTGACTGACAGTTCTCTGCAATACTCAGAATGCATTCGAATGGCCCGCCAGGATGTTAGTCCATTTGGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS-3UTR CAA 90 bp | ACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGATGCCCCATGACTCTTTaGGGAATGTTGCCAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: TCTNRNREWSRDCKTNCRCPMTL*GMLPNG Trigger: TCCATTTGGCAACATTCCCAAAAGAGTCATGGGGCA...TCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CAA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGAGGAGCTCCCACTTGTaGGGCTTGGGTGATCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: THPQMSTFTMLKGKGLIKRSSHL*GLGDLP Trigger: GGGGAGATCACCCAAGCCCAACAAGTGGGAGCTCCT...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS-3UTR CAA 90 bp | GCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAATCCCTTTTCTTCTGTaGGCAAGTGTCTCTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: AQTGTGNGAETVRPTVDQIPFLL*ASVSSP Trigger: TGGTGAAGAGACACTTGCCAACAGAAGAAAAGGGAT...TTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS CCA 90 bp | AGAAGAGATGTCCATACTCTCTGTTCATTCTTTTGTTCAGCAGTATaGATTCGAGCCAGCTTCCTGATGCTGACTGCATGCTTCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRDVHTLCSFFCSAV*IRASFLMLTACFSA Trigger: TGCAGAGAAGCATGCAGTCAGCATCAGGAAGCTGGCTCGAATCCATACTGCTGAACAAAAGAATGAACAGAGAGTATGGACATCTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
||
| CDS-3UTR CAA 90 bp | TTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCGGTGTAATTCTCTGCTaGTCTGATGAGGGTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FYKTCTNRNREWSRDCKTGVILC*SDEGFQ Trigger: CTGGAAACCCTCATCAGACAAGCAGAGAATTACACC...GGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS CCA 90 bp | GAAAAGCAGCTGCATTTCGAGATATTAGCAACTTTAATGTTGAGCTaGATGTCTGAAGCACCTGCTGCAAATCTTGCCGAGCTGCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: EKQLHFEILATLMLS*MSEAPAANLAELQS Trigger: AGATTGCAGCTCGGCAAGATTTGCAGCAGGTGCTTCAGACATCCAGCTCAACATTAAAGTTGCTAATATCTCGAAATGCAGCTGCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS-3UTR CAA 90 bp | CATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACTTAGCAACTTTAATGTaGAGCTGGATGTCTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HAQTGTGNGAETVRPTVDLATLM*SWMSEA Trigger: TGCTTCAGACATCCAGCTCAACATTAAAGTTGCTAA...GTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CAA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGGCCCTACTGCACTCCTaGGAGAAGTGTATGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPALLHS*EKCMWS Trigger: GGACCACATACACTTCTCCAAGGAGTGCAGTAGGGC...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CAA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGCAGCCCCTGATGACATaGAGGCAGTACCCCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPQPLMT*RQYPIQ Trigger: CTGTATGGGGTACTGCCTCAATGTCATCAGGGGCTG...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CAA 90 bp | AACAGGAACAGGGAATGGAGCAGAGACTGTAAGACCAACTGTAGACCAAGTATTTCTCTTCACCATTCCTaGCAGAGATCTTCATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NRNREWSRDCKTNCRPSISLHHS*QRSSFH Trigger: ATGGAATGAAGATCTCTGCAAGGAATGGTGAAGAGA...AATACTTGGTCTACAGTTGGTCTTACAGTCTCTGCTCCATTCCCTGTTCCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CAA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGGGTTTCCAGGGTCTCTaGAAAAGCAGCTGCATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: THPQMSTFTMLKGKGLIKGFQGL*KSSCIS Trigger: CGAAATGCAGCTGCTTTTCAAGAGACCCTGGAAACC...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CAA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGATGTGGTCCGTGGTGTaGATGACCTCAATGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPMWSVV*MTSMPR Trigger: TCTGGGCATTGAGGTCATCAACACCACGGACCACAT...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CAA 90 bp | ATTTATTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTACATGTTTCTCTTTGCTaGGGTCAAAAGTACAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: IYSIRHAQTGTGNGAETVHVSLC*GQKYSG Trigger: CCCGCTGTACTTTTGACCCAAGCAAAGAGAAACATG...TACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CAA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGCATGTTTCTCTTTGCTaGGGTCAAAAGTACAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: THPQMSTFTMLKGKGLIKHVSLC*GQKYSG Trigger: CCCGCTGTACTTTTGACCCAAGCAAAGAGAAACATG...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CAA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGGTCTGCTCGATGGACTaGCTTCACATCACTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: THPQMSTFTMLKGKGLIKVCSMD*LHITEV Trigger: AACTTCAGTGATGTGAAGCAAGTCCATCGAGCAGAC...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CAA 90 bp | AGACCAACTGTAGACCAAGTATTCAAAAACATGAACCTATGGGGGCCATCTTCATCTCTGTTCATTCTTTaGTTCAGCAGTATGGATTCG | + |
|
Preference number: 5 (lower is better) Translates to: RPTVDQVFKNMNLWGPSSSLFIL*FSSMDS Trigger: CGAATCCATACTGCTGAACAAAAGAATGAACAGAGA...TGAAGATGGCCCCCATAGGTTCATGTTTTTGAATACTTGGTCTACAGTTGGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CAA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGTGCCCCATGACTCTTTaGGGAATGTTGCCAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPCPMTL*GMLPNG Trigger: TCCATTTGGCAACATTCCCAAAAGAGTCATGGGGCA...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CAA 90 bp | ATTTATTCTATAAGACATGCACAAACAGGAACAGGGAATGGAGCAGAGACTGTAATTCCATGTTTCTCTTaGCTTGGGTCAAAAGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: IYSIRHAQTGTGNGAETVIPCFS*LGSKVQ Trigger: CTGTACTTTTGACCCAAGCAAAGAGAAACATGGAAT...TACAGTCTCTGCTCCATTCCCTGTTCCTGTTTGTGCATGTCTTATAGAATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS-3UTR CAA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGTTAGCAACTTTAATGTaGAGCTGGATGTCTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: THPQMSTFTMLKGKGLIKLATLM*SWMSEA Trigger: TGCTTCAGACATCCAGCTCAACATTAAAGTTGCTAA...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CAA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGTCTCTTCACCATTCCTaGCAGAGATCTTCATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPSLHHS*QRSSFH Trigger: ATGGAATGAAGATCTCTGCAAGGAATGGTGAAGAGA...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CAA 90 bp | ACACACCCTCAAATGTCGACATTCACAATGTTAAAAGGAAAGGGTTTGATTAAGTGCAGCCTAAGGCTATaGATGAATTCTTTTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: THPQMSTFTMLKGKGLIKCSLRL*MNSFLL Trigger: CAGAAGAAAAGAATTCATCAATAGCCTTAGGCTGCA...CTTAATCAAACCCTTTCCTTTTAACATTGTGAATGTCGACATTTGAGGGTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CAA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGATTCCATGTTTCTCTTaGCTTGGGTCAAAAGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPIPCFS*LGSKVQ Trigger: CTGTACTTTTGACCCAAGCAAAGAGAAACATGGAAT...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
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| CDS-3UTR CAA 90 bp | TTTAGTGTAAAACATTATGAAGTGCCTTCAGTAAATTTATGTGAAATCGCCCCGAATTCTTTTCTTCTGTaGGCAAGTGTCTCTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: FSVKHYEVPSVNLCEIAPNSFLL*ASVSSP Trigger: TGGTGAAGAGACACTTGCCAACAGAAGAAAAGAATT...CGGGGCGATTTCACATAAATTTACTGAAGGCACTTCATAATGTTTTACACTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176912.8 |
||
| CDS CCA 72 bp | GAGCACCCAGCATCGGCAGCGCGGGAGGAAGATGCGTaGCGGAATCTGGCAAGGGTTCGATGCGCAGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: EHPASAAREEDA*RNLARVRCAGG Trigger: GCCGCCTGCGCATCGAACCCTTGCCAGATTCCGCCACGCATCTTCCTCCCGCGCTGCCGATGCTGGGTGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS TCA 72 bp | GATCAGGTCCTGCCCGCGGCGCCTCCGGCAGCCCTTTaGCAGCTCCCCCAAGCCGCCACTGGAAAAGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: DQVLPAAPPAAL*QLPQAATGKVS Trigger: GGAAACTTTTCCAGTGGCGGCTTGGGGGAGCTGTCAAAGGGCTGCCGGAGGCGCCGCGGGCAGGACCTGATC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS TCA 72 bp | CTGGTACAGCACGTTGGGTTTTTGGATAGGCAAACCTaGAGATCAGGTCCTGCCCGCGGCGCCTCCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LVQHVGFLDRQT*RSGPARGASGS Trigger: GCTGCCGGAGGCGCCGCGGGCAGGACCTGATCTTCAGGTTTGCCTATCCAAAAACCCAACGTGCTGTACCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS GCA 72 bp | GTGGTGTTGATGACCTCAATGCCCAGATTAAGCGCCTaGAAGAATGTGCGGCCAGGCAGCAGCGACCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VVLMTSMPRLSA*KNVRPGSSDLP Trigger: GGGGAGGTCGCTGCTGCCTGGCCGCACATTCTTGCAGGCGCTTAATCTGGGCATTGAGGTCATCAACACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS CAA 72 bp | GGCAGCAGCGACCTCCCCATCTGCCCCATGACTCTTTaGGGAATGTTGCCAAATGGACTAACATCCTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSSDLPICPMTL*GMLPNGLTSWR Trigger: CCGCCAGGATGTTAGTCCATTTGGCAACATTCCCAAAAGAGTCATGGGGCAGATGGGGAGGTCGCTGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS CAA 72 bp | AGCTCAGTCATGTGGGCCAGGCAGCCCCTGATGACATaGAGGCAGTACCCCATACAGGGCTTACTGAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSVMWARQPLMT*RQYPIQGLLSI Trigger: GATGCTCAGTAAGCCCTGTATGGGGTACTGCCTCAATGTCATCAGGGGCTGCCTGGCCCACATGACTGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS CAA 90 bp | TGTGGATTAAGCTCAGTCATGTGGGCCAGGCAGCCCCTGATGACATaGAGGCAGTACCCCATACAGGGCTTACTGAGCATCAGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CGLSSVMWARQPLMT*RQYPIQGLLSIRLW Trigger: CCAGAGCCTGATGCTCAGTAAGCCCTGTATGGGGTACTGCCTCAATGTCATCAGGGGCTGCCTGGCCCACATGACTGAGCTTAATCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS CAA 90 bp | GAGCTGCAATCTGGTACCTCTCCTCCATCTTCCTGGTACAGCACGTaGGGTTTTTGGATAGGCAAACCTGAAGATCAGGTCCTGCCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: ELQSGTSPPSSWYST*GFWIGKPEDQVLPA Trigger: CGCGGGCAGGACCTGATCTTCAGGTTTGCCTATCCAAAAACCCAACGTGCTGTACCAGGAAGATGGAGGAGAGGTACCAGATTGCAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
||
| CDS CAA 90 bp | AGGGCCCTACTGCACTCCTTGGAGAAGTGTATGTGGTCCGTGGTGTaGATGACCTCAATGCCCAGATTAAGCGCCTGCAAGAATGTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RALLHSLEKCMWSVV*MTSMPRLSACKNVR Trigger: CCGCACATTCTTGCAGGCGCTTAATCTGGGCATTGAGGTCATCAACACCACGGACCACATACACTTCTCCAAGGAGTGCAGTAGGGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS CCA 72 bp | TCTCCTCCATCTTCCTGGTACAGCACGTTGGGTTTTTaGATAGGCAAACCTGAAGATCAGGTCCTGCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: SPPSSWYSTLGF*IGKPEDQVLPA Trigger: CGCGGGCAGGACCTGATCTTCAGGTTTGCCTATCCAAAAACCCAACGTGCTGTACCAGGAAGATGGAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS GCA 72 bp | AGTGAGGACAATACTGCATCTTCAGGAGGGCCCTACTaGACTCCTTGGAGAAGTGTATGTGGTCCGTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: SEDNTASSGGPY*TPWRSVCGPWC Trigger: ACACCACGGACCACATACACTTCTCCAAGGAGTGCAGTAGGGCCCTCCTGAAGATGCAGTATTGTCCTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS CCA 72 bp | GCCGAGCTGCAATCTGGTACCTCTCCTCCATCTTCCTaGTACAGCACGTTGGGTTTTTGGATAGGCAAACCT | + |
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Preference number: 6 (lower is better) Translates to: AELQSGTSPPSS*YSTLGFWIGKP Trigger: AGGTTTGCCTATCCAAAAACCCAACGTGCTGTACCAGGAAGATGGAGGAGAGGTACCAGATTGCAGCTCGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS CCA 72 bp | AGGAGGGCCCTACTGCACTCCTTGGAGAAGTGTATGTaGTCCGTGGTGTTGATGACCTCAATGCCCAGATTA | + |
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Preference number: 6 (lower is better) Translates to: RRALLHSLEKCM*SVVLMTSMPRL Trigger: TAATCTGGGCATTGAGGTCATCAACACCACGGACCACATACACTTCTCCAAGGAGTGCAGTAGGGCCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS CCA 72 bp | CAACTCTTCCAAAGACCGGATATAAGCATGCCAGTGTaGATTAAGCTCAGTCATGTGGGCCAGGCAGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: QLFQRPDISMPV*IKLSHVGQAAP Trigger: AGGGGCTGCCTGGCCCACATGACTGAGCTTAATCCACACTGGCATGCTTATATCCGGTCTTTGGAAGAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS CAA 72 bp | CTGCACTCCTTGGAGAAGTGTATGTGGTCCGTGGTGTaGATGACCTCAATGCCCAGATTAAGCGCCTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: LHSLEKCMWSVV*MTSMPRLSACK Trigger: CTTGCAGGCGCTTAATCTGGGCATTGAGGTCATCAACACCACGGACCACATACACTTCTCCAAGGAGTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS CAA 72 bp | CAATACTGCATCTTCAGGAGGGCCCTACTGCACTCCTaGGAGAAGTGTATGTGGTCCGTGGTGTTGATGACC | + |
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Preference number: 6 (lower is better) Translates to: QYCIFRRALLHS*EKCMWSVVLMT Trigger: GGTCATCAACACCACGGACCACATACACTTCTCCAAGGAGTGCAGTAGGGCCCTCCTGAAGATGCAGTATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS TCA 72 bp | TGTGATCTTCAGGGTCCTCTTTACTTCTCCGCTTCCTaGTCCTCCACAGCCATCTTCGTCATCACAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CDLQGPLYFSAS*SSTAIFVITVS Trigger: GGAGACTGTGATGACGAAGATGGCTGTGGAGGATCAGGAAGCGGAGAAGTAAAGAGGACCCTGAAGATCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022707.7 ENSMUST00000176912.8 |
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| CDS GCA 72 bp | TCGAGCCAGCTTCCTGATGCTGACTGCATGCTTCTCTaGAGTACGCTGTATCCCTTTTCTTCTGTTGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: SSQLPDADCMLL*STLYPFSSVGK Trigger: CTTGCCAACAGAAGAAAAGGGATACAGCGTACTGCAGAGAAGCATGCAGTCAGCATCAGGAAGCTGGCTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS CCA 72 bp | GCACATCCGGTGCTGGTTGTATCCAGAGTACTTCCATaGTCTGCTCGATGGACTTGCTTCACATCACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: AHPVLVVSRVLP*SARWTCFTSLK Trigger: CTTCAGTGATGTGAAGCAAGTCCATCGAGCAGACCATGGAAGTACTCTGGATACAACCAGCACCGGATGTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022707.7 ENSMUST00000176912.8 |
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| CDS TCA 72 bp | TGGACTAACATCCTGGCGGGCCATTCGAATGCATTCTaGGTATTGCAGAGAACTGTCAGTCACACCAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: WTNILAGHSNAF*VLQRTVSHTRV Trigger: AACCCTGGTGTGACTGACAGTTCTCTGCAATACTCAGAATGCATTCGAATGGCCCGCCAGGATGTTAGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS TCA 72 bp | CACGTGTTCAACGTCGTAGGTTCCGTGCATCGCATCTaGCAACTCTTCCAAAGACCGGATATAAGCATGCCA | + |
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Preference number: 6 (lower is better) Translates to: HVFNVVGSVHRI*QLFQRPDISMP Trigger: TGGCATGCTTATATCCGGTCTTTGGAAGAGTTGTCAGATGCGATGCACGGAACCTACGACGTTGAACACGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS GCA 72 bp | GTATGGATTCGAGCCAGCTTCCTGATGCTGACTGCATaGTTCTCTGCAGTACGCTGTATCCCTTTTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: VWIRASFLMLTA*FSAVRCIPFLL Trigger: CAGAAGAAAAGGGATACAGCGTACTGCAGAGAAGCATGCAGTCAGCATCAGGAAGCTGGCTCGAATCCATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS GCA 72 bp | AGCAGTATGGATTCGAGCCAGCTTCCTGATGCTGACTaGATGCTTCTCTGCAGTACGCTGTATCCCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SSMDSSQLPDAD*MLLCSTLYPFS Trigger: AGAAAAGGGATACAGCGTACTGCAGAGAAGCATGCAGTCAGCATCAGGAAGCTGGCTCGAATCCATACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS CCA 72 bp | TTTGCTTGGGTCAAAAGTACAGCGGGGGCTCTGTGTTaGTGTTCTCACTGGATGGCCACAAATCGTATTCAC | + |
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Preference number: 6 (lower is better) Translates to: FAWVKSTAGALC*CSHWMATNRIH Trigger: GTGAATACGATTTGTGGCCATCCAGTGAGAACACCAACACAGAGCCCCCGCTGTACTTTTGACCCAAGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS CAA 72 bp | CTTTGCTTGGGTCAAAAGTACAGCGGGGGCTCTGTGTaGGTGTTCTCACTGGATGGCCACAAATCGTATTCA | + |
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Preference number: 6 (lower is better) Translates to: LCLGQKYSGGSV*VFSLDGHKSYS Trigger: TGAATACGATTTGTGGCCATCCAGTGAGAACACCAACACAGAGCCCCCGCTGTACTTTTGACCCAAGCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS CAA 90 bp | CATGTTTCTCTTTGCTTGGGTCAAAAGTACAGCGGGGGCTCTGTGTaGGTGTTCTCACTGGATGGCCACAAATCGTATTCACCTGATCCA | + |
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Preference number: 6 (lower is better) Translates to: HVSLCLGQKYSGGSV*VFSLDGHKSYSPDP Trigger: TGGATCAGGTGAATACGATTTGTGGCCATCCAGTGAGAACACCAACACAGAGCCCCCGCTGTACTTTTGACCCAAGCAAAGAGAAACATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS CAA 90 bp | GGTGCTGGTTGTATCCAGAGTACTTCCATGGTCTGCTCGATGGACTaGCTTCACATCACTGAAGTTCATGCTGTCTGGCATCCAGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: GAGCIQSTSMVCSMD*LHITEVHAVWHPVC Trigger: ACAAACTGGATGCCAGACAGCATGAACTTCAGTGATGTGAAGCAAGTCCATCGAGCAGACCATGGAAGTACTCTGGATACAACCAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022707.7 ENSMUST00000176912.8 |
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| CDS GCA 72 bp | GTATCCAGAGTACTTCCATGGTCTGCTCGATGGACTTaGTTCACATCACTGAAGTTCATGCTGTCTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: VSRVLPWSARWT*FTSLKFMLSGI Trigger: GATGCCAGACAGCATGAACTTCAGTGATGTGAAGCAAGTCCATCGAGCAGACCATGGAAGTACTCTGGATAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022707.7 ENSMUST00000176912.8 |
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| CDS GCA 72 bp | TCCGGTGCTGGTTGTATCCAGAGTACTTCCATGGTCTaGTCGATGGACTTGCTTCACATCACTGAAGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SGAGCIQSTSMV*SMDLLHITEVH Trigger: ATGAACTTCAGTGATGTGAAGCAAGTCCATCGAGCAGACCATGGAAGTACTCTGGATACAACCAGCACCGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022707.7 ENSMUST00000176912.8 |
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| CDS CAA 90 bp | GTTCCGGTAGGTGTTGCAGAAAAGGATACTGGTGTAATTCTCTGCTaGTCTGATGAGGGTTTCCAGGGTCTCTTGAAAAGCAGCTGCATT | + |
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Preference number: 6 (lower is better) Translates to: VPVGVAEKDTGVILC*SDEGFQGLLKSSCI Trigger: AATGCAGCTGCTTTTCAAGAGACCCTGGAAACCCTCATCAGACAAGCAGAGAATTACACCAGTATCCTTTTCTGCAACACCTACCGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS GCA 72 bp | ACATCCTGGCGGGCCATTCGAATGCATTCTGAGTATTaGAGAGAACTGTCAGTCACACCAGGGTTTATAAGA | + |
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Preference number: 6 (lower is better) Translates to: TSWRAIRMHSEY*RELSVTPGFIR Trigger: TCTTATAAACCCTGGTGTGACTGACAGTTCTCTGCAATACTCAGAATGCATTCGAATGGCCCGCCAGGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS CCA 72 bp | CTGGTTGTATCCAGAGTACTTCCATGGTCTGCTCGATaGACTTGCTTCACATCACTGAAGTTCATGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LVVSRVLPWSAR*TCFTSLKFMLS Trigger: AGACAGCATGAACTTCAGTGATGTGAAGCAAGTCCATCGAGCAGACCATGGAAGTACTCTGGATACAACCAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022707.7 ENSMUST00000176912.8 |
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| CDS CCA 72 bp | GCTTCTCTGCAGTACGCTGTATCCCTTTTCTTCTGTTaGCAAGTGTCTCTTCACCATTCCTTGCAGAGATCT | + |
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Preference number: 6 (lower is better) Translates to: ASLQYAVSLFFC*QVSLHHSLQRS Trigger: AGATCTCTGCAAGGAATGGTGAAGAGACACTTGCCAACAGAAGAAAAGGGATACAGCGTACTGCAGAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS CCA 72 bp | GTCCATACTCTCTGTTCATTCTTTTGTTCAGCAGTATaGATTCGAGCCAGCTTCCTGATGCTGACTGCATGC | + |
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Preference number: 6 (lower is better) Translates to: VHTLCSFFCSAV*IRASFLMLTAC Trigger: GCATGCAGTCAGCATCAGGAAGCTGGCTCGAATCCATACTGCTGAACAAAAGAATGAACAGAGAGTATGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175665.8 |
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| CDS CAA 72 bp | TGTATCCAGAGTACTTCCATGGTCTGCTCGATGGACTaGCTTCACATCACTGAAGTTCATGCTGTCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: CIQSTSMVCSMD*LHITEVHAVWH Trigger: ATGCCAGACAGCATGAACTTCAGTGATGTGAAGCAAGTCCATCGAGCAGACCATGGAAGTACTCTGGATACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022707.7 ENSMUST00000176912.8 |
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| CDS GCA 72 bp | GTAGGTGTTGCAGAAAAGGATACTGGTGTAATTCTCTaGTTGTCTGATGAGGGTTTCCAGGGTCTCTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: VGVAEKDTGVIL*LSDEGFQGLLK Trigger: TTTCAAGAGACCCTGGAAACCCTCATCAGACAAGCAGAGAATTACACCAGTATCCTTTTCTGCAACACCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022707.7 ENSMUST00000175665.8 ENSMUST00000176912.8 |
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| CDS CAA 72 bp | TGCAGCCTAAGGCTATTGATGAATTCTTTTCTTCTGTaGGCAAGTGTCTCTTCACCATTCCTTGCAGAGATC | + |
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Preference number: 6 (lower is better) Translates to: CSLRLLMNSFLL*ASVSSPFLAEI Trigger: GATCTCTGCAAGGAATGGTGAAGAGACACTTGCCAACAGAAGAAAAGAATTCATCAATAGCCTTAGGCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022707.7 ENSMUST00000176912.8 |
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