Pregenerated sensors for GPC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031119Ensembl transcript IDs: ENSMUST00000033450.3
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGGCTGTCCCCTCAAACTaGATGAGCAAAACAAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: QDHQCTTNYSSVPTLLATAVPSN*MSKTKS Trigger: TGACTTTGTTTTGCTCATTCAGTTTGAGGGGACAGC...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGCATTGCTTAAACCAGTaGCCACACAGTAAAAACTGT | + |
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Preference number: 2 (lower is better) Translates to: QDHQCTTNYSSVPTLLATHCLNQ*PHSKNC Trigger: ACAGTTTTTACTGTGTGGCCACTGGTTTAAGCAATG...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| 3UTR-3UTR TCA 90 bp | TTAATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTCCCCTCAAACTGAATaGGCAAAACAAAGTCAACAT | + |
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Preference number: 2 (lower is better) Translates to: LIFQKYVHVTCQERTLVFSPQTE*AKQSQH Trigger: ATGTTGACTTTGTTTTGCTCATTCAGTTTGAGGGGA...GAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| 3UTR-3UTR CAA 90 bp | AGAAAACAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGAGAACTTGGTGCCTTaGAACTTTCTGATGATGAAC | + |
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Preference number: 3 (lower is better) Translates to: RKQDHQCTTNYSSVPTLLENLVP*NFLMMN Trigger: GTTCATCATCAGAAAGTTCAAAGGCACCAAGTTCTC...TAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTGTTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR TCA 90 bp | CATGCCAAGAAAGGACCCTGGTTTTCTTGTGAGAAACAAGGTGAGACCATAATTCCAGCAGCGAGGCGCTaGGCGCGGCCAGGGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: HAKKGPWFSCEKQGETIIPAARR*ARPGCR Trigger: TCTGCACCCTGGCCGCGCTCAGCGCCTCGCTGCTGG...AATTATGGTCTCACCTTGTTTCTCACAAGAAAACCAGGGTCCTTTCTTGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR TCA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGAGCAACTTTTCGACTTaGGCTCCGCAGCCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: QDHQCTTNYSSVPTLLATSNFST*APQPAA Trigger: CGCTGCTGGCTGCGGAGCTCAAGTCGAAAAGTTGCT...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGGGGTGCACTGAGCTGTaGGGTTCACCACGGACACTT | + |
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Preference number: 4 (lower is better) Translates to: QDHQCTTNYSSVPTLLATGCTEL*GSPRTL Trigger: AAGTGTCCGTGGTGAACCCCACAGCTCAGTGCACCC...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGAGCGAAGGTCCTGGCTaGAACAAATGCGCGGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: QDHQCTTNYSSVPTLLATSEGPG*NKCAGN Trigger: GTTACCCGCGCATTTGTTGCAGCCAGGACCTTCGCT...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR TCA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGTCCGAAGGGCACTGCTaGTATTCACATCCGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QDHQCTTNYSSVPTLLATSEGHC*YSHPLP Trigger: TGGAAGCGGATGTGAATATCAGCAGTGCCCTTCGGA...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | AGTCAACATTGCTTAAACCAGTGGCCACACAGTAAAAACTGTACATTGTTGTCCGGCTTTGCCTCTGCATaGGCACCACCGGCACTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SQHCLNQWPHSKNCTLLSGFASA*APPALS Trigger: TGACAGTGCCGGTGGTGCCCATGCAGAGGCAAAGCC...GGACAACAATGTACAGTTTTTACTGTGTGGCCACTGGTTTAAGCAATGTTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | AGTCAACATTGCTTAAACCAGTGGCCACACAGTAAAAACTGTACATTGTTGTCCAGAAATTCGTCCAGCTaGGAGAGGCTTCGGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQHCLNQWPHSKNCTLLSRNSSS*ERLRRA Trigger: GGCCCTCCGAAGCCTCTCCCAGCTGGACGAATTTCT...GGACAACAATGTACAGTTTTTACTGTGTGGCCACTGGTTTAAGCAATGTTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR TCA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGGGGCATCATTCTTGTTaGAGCCTTTGGACACGTAGA | + |
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Preference number: 4 (lower is better) Translates to: QDHQCTTNYSSVPTLLATGHHSC*SLWTRR Trigger: TCTACGTGTCCAAAGGCTTCAACAAGAATGATGCCC...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR TCA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGGCCTCGCATGATGTTTaGGCAATAGTTGTAACAGGG | + |
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Preference number: 4 (lower is better) Translates to: QDHQCTTNYSSVPTLLATASHDV*AIVVTG Trigger: CCCTGTTACAACTATTGCTCAAACATCATGCGAGGC...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | AGTCAACATTGCTTAAACCAGTGGCCACACAGTAAAAACTGTACATTGTTGTCCAATGCGCGGGTAACCTaGAGCTTCAGTTTCCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: SQHCLNQWPHSKNCTLLSNARVT*SFSFRG Trigger: CCCTCGGAAACTGAAGCTCCAGGTTACCCGCGCATT...GGACAACAATGTACAGTTTTTACTGTGTGGCCACTGGTTTAAGCAATGTTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGATTGCAAACGGTGCTTaGGAGAGAGGACCAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: QDHQCTTNYSSVPTLLATIANGA*ERGPEL Trigger: AAGTTCTGGTCCTCTCTCCCAAGCACCGTTTGCAAT...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR TCA 90 bp | AATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTTAGTGCATGGGTGCACTaGGCTGTGGGGTTCACCACG | + |
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Preference number: 4 (lower is better) Translates to: NISEIRTCYMPRKDPGFLSAWVH*AVGFTT Trigger: CGTGGTGAACCCCACAGCTCAGTGCACCCATGCACT...AAGAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | AGTCAACATTGCTTAAACCAGTGGCCACACAGTAAAAACTGTACATTGTTGTCCGGACTTCTGGGTTGTTaGCCTGGTTGGCCAATCCAT | + |
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Preference number: 4 (lower is better) Translates to: SQHCLNQWPHSKNCTLLSGLLGC*PGWPIH Trigger: ATGGATTGGCCAACCAGGGCAACAACCCAGAAGTCC...GGACAACAATGTACAGTTTTTACTGTGTGGCCACTGGTTTAAGCAATGTTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | TTAATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCGAGGAGGTAGGGCTTTaGCTCTGCATGGGCACCACC | + |
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Preference number: 4 (lower is better) Translates to: LIFQKYVHVTCQERTLVFEEVGL*LCMGTT Trigger: GGTGGTGCCCATGCAGAGGCAAAGCCCTACCTCCTC...GAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | CATGCCAAGAAAGGACCCTGGTTTTCTTGTGAGAAACAAGGTGAGACCATAATTTATCTCCACTCTCCCTaGACAGCGAGAAACAGGATG | + |
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Preference number: 4 (lower is better) Translates to: HAKKGPWFSCEKQGETIIYLHSP*TARNRM Trigger: CATCCTGTTTCTCGCTGTGCAGGGAGAGTGGAGATA...AATTATGGTCTCACCTTGTTTCTCACAAGAAAACCAGGGTCCTTTCTTGGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | CATGCCAAGAAAGGACCCTGGTTTTCTTGTGAGAAACAAGGTGAGACCATAATTTCTGGGTTGTTGCCCTaGTTGGCCAATCCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HAKKGPWFSCEKQGETIISGLLP*LANPFP Trigger: AGGAAATGGATTGGCCAACCAGGGCAACAACCCAGA...AATTATGGTCTCACCTTGTTTCTCACAAGAAAACCAGGGTCCTTTCTTGGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | AATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTTCAAACTAGTGCCAGCTaGCGTGGTTGGGCGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NISEIRTCYMPRKDPGFLQTSAS*RGWALL Trigger: GAGCAACGCCCAACCACGGCAGCTGGCACTAGTTTG...AAGAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGTCCATTTCCTGTCACTaGAAACAGGTACCTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: QDHQCTTNYSSVPTLLATSISCH*KQVPAF Trigger: AAAAGCAGGTACCTGTTTGCAGTGACAGGAAATGGA...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR TCA 90 bp | AGAAAACAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTACGAAGGGCCATGATCTaGCGAAGGATCAGTATGTCT | + |
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Preference number: 4 (lower is better) Translates to: RKQDHQCTTNYSSVPTLLRRAMI*RRISMS Trigger: AGACATACTGATCCTTCGTCAGATCATGGCCCTTCG...TAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | TTAATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTCAGCAGTGCATGGGTaGACTGAGCTGTGGGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LIFQKYVHVTCQERTLVFSAVHG*TELWGS Trigger: TGAACCCCACAGCTCAGTGCACCCATGCACTGCTGA...GAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | AATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTTACCCTCCAGCCTCTCTaGCACCATCAGCATAGCATC | + |
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Preference number: 4 (lower is better) Translates to: NISEIRTCYMPRKDPGFLTLQPL*HHQHSI Trigger: GATGCTATGCTGATGGTGGCAGAGAGGCTGGAGGGT...AAGAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | AGAAAACAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTACCATCCTCTCATCATTaGAAACGGTGCTTGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: RKQDHQCTTNYSSVPTLLPSSHH*KRCLGE Trigger: CTCTCCCAAGCACCGTTTGCAATGATGAGAGGATGG...TAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | CATGCCAAGAAAGGACCCTGGTTTTCTTGTGAGAAACAAGGTGAGACCATAATTTCTGTAAAATGGTACTaGGAGTTCACCAGGCGAAAC | + |
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Preference number: 4 (lower is better) Translates to: HAKKGPWFSCEKQGETIISVKWY*EFTRRN Trigger: GTTTCGCCTGGTGAACTCCCAGTACCATTTTACAGA...AATTATGGTCTCACCTTGTTTCTCACAAGAAAACCAGGGTCCTTTCTTGGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | AGAAAACAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAAAATCAAGGTCTCCTTaGTTGGCCAAACAGCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: RKQDHQCTTNYSSVPTLLKSRSP*LAKQPR Trigger: GCGAGGCTGTTTGGCCAACCAAGGAGACCTTGATTT...TAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | TTAATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCGTCAACCTGGACTTCTaGGTTGTTGCCCTGGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LIFQKYVHVTCQERTLVFVNLDF*VVALVG Trigger: GCCAACCAGGGCAACAACCCAGAAGTCCAGGTTGAC...GAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | AGAAAACAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAAGGCACTTTCAGAGATaGAGCGAGAAATTCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RKQDHQCTTNYSSVPTLLRHFQR*SEKFVQ Trigger: CTGGACGAATTTCTCGCTCCATCTCTGAAAGTGCCT...TAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTGTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | TTAATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTTGCTGGTGTCAACCTaGACTTCTGGGTTGTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LIFQKYVHVTCQERTLVFLLVST*TSGLLP Trigger: GGGCAACAACCCAGAAGTCCAGGTTGACACCAGCAA...GAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | TTAATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCGCACTCTTCCCAGAATaGTCAGTGGCGTTGTACTCG | + |
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Preference number: 4 (lower is better) Translates to: LIFQKYVHVTCQERTLVFALFPE*SVALYS Trigger: CGAGTACAACGCCACTGACCATTCTGGGAAGAGTGC...GAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR TCA 90 bp | AGAAAACAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTACCAAACAGCCTCGCATaGTGTTTGAGCAATAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RKQDHQCTTNYSSVPTLLPNSLA*CLSNSC Trigger: ACAACTATTGCTCAAACATCATGCGAGGCTGTTTGG...TAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTGTTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | AGAAAACAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGATGCAAAGATGGCTTaGAAATGGTTGCACTGTTCG | + |
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Preference number: 4 (lower is better) Translates to: RKQDHQCTTNYSSVPTLLDAKMA*KWLHCS Trigger: CGAACAGTGCAACCATTTGCAAGCCATCTTTGCATC...TAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTGTTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | AGTCAACATTGCTTAAACCAGTGGCCACACAGTAAAAACTGTACATTGTTGTCCCTTCTTGTAACGGGATaGAAAGATGGCTTGCAAATG | + |
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Preference number: 4 (lower is better) Translates to: SQHCLNQWPHSKNCTLLSLLVTG*KDGLQM Trigger: CATTTGCAAGCCATCTTTGCATCCCGTTACAAGAAG...GGACAACAATGTACAGTTTTTACTGTGTGGCCACTGGTTTAAGCAATGTTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | AGTCAACATTGCTTAAACCAGTGGCCACACAGTAAAAACTGTACATTGTTGTCCCCAAAAGGCTTCAGCTaGTCTGTATATTTGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: SQHCLNQWPHSKNCTLLSPKGFS*SVYLLT Trigger: TGTGAGCAAATATACAGAGCAGCTGAAGCCTTTTGG...GGACAACAATGTACAGTTTTTACTGTGTGGCCACTGGTTTAAGCAATGTTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | TTAATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCGGTTGTTGCCCTGGTTaGCCAATCCATTTCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LIFQKYVHVTCQERTLVFGCCPG*PIHFLS Trigger: TGACAGGAAATGGATTGGCCAACCAGGGCAACAACC...GAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | TTAATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCGTATGTCTGGCTTGCTaGTGTCAACCTGGACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LIFQKYVHVTCQERTLVFVCLAC*CQPGLL Trigger: CAGAAGTCCAGGTTGACACCAGCAAGCCAGACATAC...GAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | AGTCAACATTGCTTAAACCAGTGGCCACACAGTAAAAACTGTACATTGTTGTCCATTTTCATTTCCTGCTaGCATCCTCTCATCATTGCA | + |
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Preference number: 4 (lower is better) Translates to: SQHCLNQWPHSKNCTLLSIFISC*HPLIIA Trigger: TGCAATGATGAGAGGATGGCAGCAGGAAATGAAAAT...GGACAACAATGTACAGTTTTTACTGTGTGGCCACTGGTTTAAGCAATGTTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | TTAATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCCTGCAAACAGGTACCTaGTTTTGCCTTTGCCATTCC | + |
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Preference number: 4 (lower is better) Translates to: LIFQKYVHVTCQERTLVFLQTGT*FCLCHS Trigger: GGAATGGCAAAGGCAAAAGCAGGTACCTGTTTGCAG...GAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | TTAATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTCAGTATGTCTGGCTTaGTGGTGTCAACCTGGACTT | + |
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Preference number: 4 (lower is better) Translates to: LIFQKYVHVTCQERTLVFSVCLA*WCQPGL Trigger: AAGTCCAGGTTGACACCAGCAAGCCAGACATACTGA...GAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | AATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTTAAGATGGCTTGCAAATaGTTGCACTGTTCGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: NISEIRTCYMPRKDPGFLKMACK*LHCSLT Trigger: GGTCAGCGAACAGTGCAACCATTTGCAAGCCATCTT...AAGAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | AATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTTAAGGATCAGTATGTCTaGCTTGCTGGTGTCAACCTG | + |
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Preference number: 4 (lower is better) Translates to: NISEIRTCYMPRKDPGFLKDQYV*LAGVNL Trigger: CAGGTTGACACCAGCAAGCCAGACATACTGATCCTT...AAGAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | AGTCAACATTGCTTAAACCAGTGGCCACACAGTAAAAACTGTACATTGTTGTCCAAATCATCTTTACTTTaGAGGCTGTACTTCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SQHCLNQWPHSKNCTLLSKSSLL*RLYFSS Trigger: GGAAGAGAAGTACAGCCTGCAAAGTAAAGATGATTT...GGACAACAATGTACAGTTTTTACTGTGTGGCCACTGGTTTAAGCAATGTTGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | AATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTTTCACCACGGACACTTTaGTTACTACATCCCTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NISEIRTCYMPRKDPGFLSPRTL*LLHPLQ Trigger: TTGCAAGGGATGTAGTAAGCAAAGTGTCCGTGGTGA...AAGAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CCA 90 bp | AATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTTAACGGGATGCAAAGATaGCTTGCAAATGGTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NISEIRTCYMPRKDPGFLNGMQR*LANGCT Trigger: AGTGCAACCATTTGCAAGCCATCTTTGCATCCCGTT...AAGAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR GCA 90 bp | AATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTTCTCATTTTCATTTCCTaGTGCCATCCTCTCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: NISEIRTCYMPRKDPGFLLIFIS*CHPLII Trigger: AATGATGAGAGGATGGCAGCAGGAAATGAAAATGAG...AAGAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS GCA 90 bp | CACAGCGAGAAACAGGATGCAGAGAGCAGCGAGGAGGTAGGGCTTTaGCTCTGCATGGGCACCACCGGCACTGTCAGCTTTCTCGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HSEKQDAESSEEVGL*LCMGTTGTVSFLVG Trigger: GCCAACGAGAAAGCTGACAGTGCCGGTGGTGCCCATGCAGAGGCAAAGCCCTACCTCCTCGCTGCTCTCTGCATCCTGTTTCTCGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS GCA 90 bp | GAGAAACAGGATGCAGAGAGCAGCGAGGAGGTAGGGCTTTGCCTCTaGATGGGCACCACCGGCACTGTCAGCTTTCTCGTTGGCACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EKQDAESSEEVGLCL*MGTTGTVSFLVGTL Trigger: AAGAGTGCCAACGAGAAAGCTGACAGTGCCGGTGGTGCCCATGCAGAGGCAAAGCCCTACCTCCTCGCTGCTCTCTGCATCCTGTTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 90 bp | GCTTTGCCTCTGCATGGGCACCACCGGCACTGTCAGCTTTCTCGTTaGCACTCTTCCCAGAATGGTCAGTGGCGTTGTACTCGAACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ALPLHGHHRHCQLSR*HSSQNGQWRCTRTP Trigger: CGGAGTTCGAGTACAACGCCACTGACCATTCTGGGAAGAGTGCCAACGAGAAAGCTGACAGTGCCGGTGGTGCCCATGCAGAGGCAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 90 bp | AGCACTGAAGGCACTTTCAGAGATGGAGCGAGAAATTCGTCCAGCTaGGAGAGGCTTCGGAGGGCCACAGCCTTGGAAAACCTTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: STEGTFRDGARNSSS*ERLRRATALENLLR Trigger: TCTCAGAAGGTTTTCCAAGGCTGTGGCCCTCCGAAGCCTCTCCCAGCTGGACGAATTTCTCGCTCCATCTCTGAAAGTGCCTTCAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 90 bp | GACATCAGTAACCAGTCGGTCCAAACTAGTGCCAGCTGCCGTGGTTaGGCGTTGCTCTGGATGATAAGGTCTGAATCGAGCACTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DISNQSVQTSASCRG*ALLWMIRSESSTEG Trigger: GCCTTCAGTGCTCGATTCAGACCTTATCATCCAGAGCAACGCCCAACCACGGCAGCTGGCACTAGTTTGGACCGACTGGTTACTGATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 90 bp | GGGAGCAGTAGATCATCTTCAGCAGTGCATGGGTGCACTGAGCTGTaGGGTTCACCACGGACACTTTGCTTACTACATCCCTTGCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: GSSRSSSAVHGCTEL*GSPRTLCLLHPLQL Trigger: CAGTTGCAAGGGATGTAGTAAGCAAAGTGTCCGTGGTGAACCCCACAGCTCAGTGCACCCATGCACTGCTGAAGATGATCTACTGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 90 bp | CAGTCGGTCCAAACTAGTGCCAGCTGCCGTGGTTGGGCGTTGCTCTaGATGATAAGGTCTGAATCGAGCACTGAAGGCACTTTCAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QSVQTSASCRGWALL*MIRSESSTEGTFRD Trigger: ATCTCTGAAAGTGCCTTCAGTGCTCGATTCAGACCTTATCATCCAGAGCAACGCCCAACCACGGCAGCTGGCACTAGTTTGGACCGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
||
| CDS CCA 90 bp | GGTCATAACCCGAAGGGCCATGATCTGACGAAGGATCAGTATGTCTaGCTTGCTGGTGTCAACCTGGACTTCTGGGTTGTTGCCCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GHNPKGHDLTKDQYV*LAGVNLDFWVVALV Trigger: AACCAGGGCAACAACCCAGAAGTCCAGGTTGACACCAGCAAGCCAGACATACTGATCCTTCGTCAGATCATGGCCCTTCGGGTTATGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 90 bp | CGGCACTGTCAGCTTTCTCGTTGGCACTCTTCCCAGAATGGTCAGTaGCGTTGTACTCGAACTCCGAAGGGCACTGCTGATATTCACATC | + |
|
Preference number: 5 (lower is better) Translates to: RHCQLSRWHSSQNGQ*RCTRTPKGTADIHI Trigger: GATGTGAATATCAGCAGTGCCCTTCGGAGTTCGAGTACAACGCCACTGACCATTCTGGGAAGAGTGCCAACGAGAAAGCTGACAGTGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGCGAGGAGGTAGGGCTTaGCCTCTGCATGGGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QDHQCTTNYSSVPTLLATRGGRA*PLHGHH Trigger: GTGGTGCCCATGCAGAGGCAAAGCCCTACCTCCTCG...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS GCA 90 bp | TTTCTCCTTGACATCAGTAACCAGTCGGTCCAAACTAGTGCCAGCTaGCGTGGTTGGGCGTTGCTCTGGATGATAAGGTCTGAATCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLLDISNQSVQTSAS*RGWALLWMIRSESS Trigger: GCTCGATTCAGACCTTATCATCCAGAGCAACGCCCAACCACGGCAGCTGGCACTAGTTTGGACCGACTGGTTACTGATGTCAAGGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 90 bp | ATGTCTGGCTTGCTGGTGTCAACCTGGACTTCTGGGTTGTTGCCCTaGTTGGCCAATCCATTTCCTGTCACTGCAAACAGGTACCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MSGLLVSTWTSGLLP*LANPFPVTANRYLL Trigger: AAGCAGGTACCTGTTTGCAGTGACAGGAAATGGATTGGCCAACCAGGGCAACAACCCAGAAGTCCAGGTTGACACCAGCAAGCCAGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS TCA 90 bp | AAAATCAAGGTCTCCTTGGTTGGCCAAACAGCCTCGCATGATGTTTaGGCAATAGTTGTAACAGGGCTTCACAGTCACCAGGCCCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KIKVSLVGQTASHDV*AIVVTGLHSHQAPA Trigger: TGCCGGGGCCTGGTGACTGTGAAGCCCTGTTACAACTATTGCTCAAACATCATGCGAGGCTGTTTGGCCAACCAAGGAGACCTTGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS TCA 90 bp | TCCACTCAAAATCAAGGTCTCCTTGGTTGGCCAAACAGCCTCGCATaGTGTTTGAGCAATAGTTGTAACAGGGCTTCACAGTCACCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: STQNQGLLGWPNSLA*CLSNSCNRASQSPG Trigger: GCCTGGTGACTGTGAAGCCCTGTTACAACTATTGCTCAAACATCATGCGAGGCTGTTTGGCCAACCAAGGAGACCTTGATTTTGAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS GCA 90 bp | TTTGCCTTTGCCATTCCAGCAGTCATCCTCATTTTCATTTCCTGCTaGCATCCTCTCATCATTGCAAACGGTGCTTGGGAGAGAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: FAFAIPAVILIFISC*HPLIIANGAWERGP Trigger: TGGTCCTCTCTCCCAAGCACCGTTTGCAATGATGAGAGGATGGCAGCAGGAAATGAAAATGAGGATGACTGCTGGAATGGCAAAGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGCATTGCAAACGGTGCTaGGGAGAGAGGACCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: QDHQCTTNYSSVPTLLATHCKRC*GERTRT Trigger: AGTTCTGGTCCTCTCTCCCAAGCACCGTTTGCAATG...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGCTGTCAGCTTTCTCGTaGGCACTCTTCCCAGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: QDHQCTTNYSSVPTLLATLSAFS*ALFPEW Trigger: CCATTCTGGGAAGAGTGCCAACGAGAAAGCTGACAG...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGAAAATCAAGGTCTCCTaGGTTGGCCAAACAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QDHQCTTNYSSVPTLLATKIKVS*VGQTAS Trigger: CGAGGCTGTTTGGCCAACCAAGGAGACCTTGATTTT...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | CAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGCCACGAACAGGTACCTGCTTTaGCCTTTGCCATTCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QDHQCTTNYSSVPTLLATNRYLL*PLPFQQ Trigger: CTGCTGGAATGGCAAAGGCAAAAGCAGGTACCTGTT...CGTGGCTAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | CATGCCAAGAAAGGACCCTGGTTTTCTTGTGAGAAACAAGGTGAGACCATAATTACCTGGACTTCTGGGTaGTTGCCCTGGTTGGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: HAKKGPWFSCEKQGETIITWTSG*LPWLAN Trigger: ATTGGCCAACCAGGGCAACAACCCAGAAGTCCAGGT...AATTATGGTCTCACCTTGTTTCTCACAAGAAAACCAGGGTCCTTTCTTGGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | CATGCCAAGAAAGGACCCTGGTTTTCTTGTGAGAAACAAGGTGAGACCATAATTGAATGGTCAGTGGCGTaGTACTCGAACTCCGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HAKKGPWFSCEKQGETIIEWSVA*YSNSEG Trigger: CCCTTCGGAGTTCGAGTACAACGCCACTGACCATTC...AATTATGGTCTCACCTTGTTTCTCACAAGAAAACCAGGGTCCTTTCTTGGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | AGTCAACATTGCTTAAACCAGTGGCCACACAGTAAAAACTGTACATTGTTGTCCTCAAGGTCTCCTTGGTaGGCCAAACAGCCTCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SQHCLNQWPHSKNCTLLSSRSPW*AKQPRM Trigger: CATGCGAGGCTGTTTGGCCAACCAAGGAGACCTTGA...GGACAACAATGTACAGTTTTTACTGTGTGGCCACTGGTTTAAGCAATGTTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | CATGCCAAGAAAGGACCCTGGTTTTCTTGTGAGAAACAAGGTGAGACCATAATTGCCATCCTCTCATCATaGCAAACGGTGCTTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HAKKGPWFSCEKQGETIIAILSS*QTVLGR Trigger: TCTCCCAAGCACCGTTTGCAATGATGAGAGGATGGC...AATTATGGTCTCACCTTGTTTCTCACAAGAAAACCAGGGTCCTTTCTTGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | AGTCAACATTGCTTAAACCAGTGGCCACACAGTAAAAACTGTACATTGTTGTCCTGGACTTCTGGGTTGTaGCCCTGGTTGGCCAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQHCLNQWPHSKNCTLLSWTSGL*PWLANP Trigger: TGGATTGGCCAACCAGGGCAACAACCCAGAAGTCCA...GGACAACAATGTACAGTTTTTACTGTGTGGCCACTGGTTTAAGCAATGTTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | CATGCCAAGAAAGGACCCTGGTTTTCTTGTGAGAAACAAGGTGAGACCATAATTTACCTGCTTTTGCCTTaGCCATTCCAGCAGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: HAKKGPWFSCEKQGETIIYLLLP*PFQQSS Trigger: GGATGACTGCTGGAATGGCAAAGGCAAAAGCAGGTA...AATTATGGTCTCACCTTGTTTCTCACAAGAAAACCAGGGTCCTTTCTTGGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 90 bp | ATTTTCATTTCCTGCTGCCATCCTCTCATCATTGCAAACGGTGCTTaGGAGAGAGGACCAGAACTTCTTAGCTTGTTTCAGTTTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: IFISCCHPLIIANGA*ERGPELLSLFQFLL Trigger: AAGGAGAAACTGAAACAAGCTAAGAAGTTCTGGTCCTCTCTCCCAAGCACCGTTTGCAATGATGAGAGGATGGCAGCAGGAAATGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | AATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTTGAGCAACTTTTCGACTaGAGCTCCGCAGCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NISEIRTCYMPRKDPGFLEQLFD*SSAASS Trigger: GCTGCTGGCTGCGGAGCTCAAGTCGAAAAGTTGCTC...AAGAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | AATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTTCGGAGGGCCACAGCCTaGGAAAACCTTCTGAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: NISEIRTCYMPRKDPGFLRRATA*ENLLRH Trigger: GTGTCTCAGAAGGTTTTCCAAGGCTGTGGCCCTCCG...AAGAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | TTAATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCGGGTTGTTGCCCTGGTaGGCCAATCCATTTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LIFQKYVHVTCQERTLVFGLLPW*ANPFPV Trigger: GACAGGAAATGGATTGGCCAACCAGGGCAACAACCC...GAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | TTAATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCATGGCTTGCAAATGGTaGCACTGTTCGCTGACCACG | + |
|
Preference number: 5 (lower is better) Translates to: LIFQKYVHVTCQERTLVFMACKW*HCSLTT Trigger: CGTGGTCAGCGAACAGTGCAACCATTTGCAAGCCAT...GAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | AGAAAACAAGATCACCAATGCACAACTAACTACAGTTCTGTACCTACACTGCTAGGATGCAAAGATGGCTaGCAAATGGTTGCACTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RKQDHQCTTNYSSVPTLLGCKDG*QMVALF Trigger: GAACAGTGCAACCATTTGCAAGCCATCTTTGCATCC...TAGCAGTGTAGGTACAGAACTGTAGTTAGTTGTGCATTGGTGATCTTGTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | AGTCAACATTGCTTAAACCAGTGGCCACACAGTAAAAACTGTACATTGTTGTCCTCGCTGACCACGGTTTaGAAATCATCTTTACTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQHCLNQWPHSKNCTLLSSLTTV*KSSLLC Trigger: GCAAAGTAAAGATGATTTCAAAACCGTGGTCAGCGA...GGACAACAATGTACAGTTTTTACTGTGTGGCCACTGGTTTAAGCAATGTTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | AATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCTTATAACGGACTCAATGTaGAAAGGACCCTCCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NISEIRTCYMPRKDPGFLITDSM*KGPSSL Trigger: GAGGCTGGAGGGTCCTTTCAACATTGAGTCCGTTAT...AAGAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | TTAATATTTCAGAAATACGTACATGTTACATGCCAAGAAAGGACCCTGGTTTTCATCAGTATGTCTGGCTaGCTGGTGTCAACCTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LIFQKYVHVTCQERTLVFISMSG*LVSTWT Trigger: AGTCCAGGTTGACACCAGCAAGCCAGACATACTGAT...GAAAACCAGGGTCCTTTCTTGGCATGTAACATGTACGTATTTCTGAAATATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS-3UTR CAA 90 bp | AGTCAACATTGCTTAAACCAGTGGCCACACAGTAAAAACTGTACATTGTTGTCCGAAATCATCTTTACTTaGCAGGCTGTACTTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQHCLNQWPHSKNCTLLSEIIFT*QAVLLF Trigger: GAAGAGAAGTACAGCCTGCAAAGTAAAGATGATTTC...GGACAACAATGTACAGTTTTTACTGTGTGGCCACTGGTTTAAGCAATGTTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CAA 90 bp | GCACAGCGAGAAACAGGATGCAGAGAGCAGCGAGGAGGTAGGGCTTaGCCTCTGCATGGGCACCACCGGCACTGTCAGCTTTCTCGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AQRETGCREQRGGRA*PLHGHHRHCQLSRW Trigger: CCAACGAGAAAGCTGACAGTGCCGGTGGTGCCCATGCAGAGGCAAAGCCCTACCTCCTCGCTGCTCTCTGCATCCTGTTTCTCGCTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CAA 72 bp | GAAACAGGATGCAGAGAGCAGCGAGGAGGTAGGGCTTaGCCTCTGCATGGGCACCACCGGCACTGTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ETGCREQRGGRA*PLHGHHRHCQL Trigger: AAGCTGACAGTGCCGGTGGTGCCCATGCAGAGGCAAAGCCCTACCTCCTCGCTGCTCTCTGCATCCTGTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
||
| CDS CAA 90 bp | GGCTTTGCCTCTGCATGGGCACCACCGGCACTGTCAGCTTTCTCGTaGGCACTCTTCCCAGAATGGTCAGTGGCGTTGTACTCGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: GFASAWAPPALSAFS*ALFPEWSVALYSNS Trigger: GGAGTTCGAGTACAACGCCACTGACCATTCTGGGAAGAGTGCCAACGAGAAAGCTGACAGTGCCGGTGGTGCCCATGCAGAGGCAAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS GCA 72 bp | AAACAGGATGCAGAGAGCAGCGAGGAGGTAGGGCTTTaGCTCTGCATGGGCACCACCGGCACTGTCAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KQDAESSEEVGL*LCMGTTGTVSF Trigger: AAAGCTGACAGTGCCGGTGGTGCCCATGCAGAGGCAAAGCCCTACCTCCTCGCTGCTCTCTGCATCCTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
||
| CDS CCA 72 bp | GGCACTTTCAGAGATGGAGCGAGAAATTCGTCCAGCTaGGAGAGGCTTCGGAGGGCCACAGCCTTGGAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GTFRDGARNSSS*ERLRRATALEN Trigger: GTTTTCCAAGGCTGTGGCCCTCCGAAGCCTCTCCCAGCTGGACGAATTTCTCGCTCCATCTCTGAAAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
||
| CDS CAA 72 bp | TCTGCATGGGCACCACCGGCACTGTCAGCTTTCTCGTaGGCACTCTTCCCAGAATGGTCAGTGGCGTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SAWAPPALSAFS*ALFPEWSVALY Trigger: GTACAACGCCACTGACCATTCTGGGAAGAGTGCCAACGAGAAAGCTGACAGTGCCGGTGGTGCCCATGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
||
| CDS CCA 72 bp | AACCAGTCGGTCCAAACTAGTGCCAGCTGCCGTGGTTaGGCGTTGCTCTGGATGATAAGGTCTGAATCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NQSVQTSASCRG*ALLWMIRSESS Trigger: GCTCGATTCAGACCTTATCATCCAGAGCAACGCCCAACCACGGCAGCTGGCACTAGTTTGGACCGACTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
||
| CDS CCA 72 bp | GCACTGTCAGCTTTCTCGTTGGCACTCTTCCCAGAATaGTCAGTGGCGTTGTACTCGAACTCCGAAGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ALSAFSLALFPE*SVALYSNSEGH Trigger: GTGCCCTTCGGAGTTCGAGTACAACGCCACTGACCATTCTGGGAAGAGTGCCAACGAGAAAGCTGACAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
||
| CDS GCA 72 bp | GGGTGCACTGAGCTGTGGGGTTCACCACGGACACTTTaGTTACTACATCCCTTGCAACTGCTAAGCCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GCTELWGSPRTL*LLHPLQLLSLE Trigger: CTCAAGGCTTAGCAGTTGCAAGGGATGTAGTAAGCAAAGTGTCCGTGGTGAACCCCACAGCTCAGTGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS GCA 72 bp | GACATCAGTAACCAGTCGGTCCAAACTAGTGCCAGCTaGCGTGGTTGGGCGTTGCTCTGGATGATAAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: DISNQSVQTSAS*RGWALLWMIRS Trigger: AGACCTTATCATCCAGAGCAACGCCCAACCACGGCAGCTGGCACTAGTTTGGACCGACTGGTTACTGATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 72 bp | CAAACTAGTGCCAGCTGCCGTGGTTGGGCGTTGCTCTaGATGATAAGGTCTGAATCGAGCACTGAAGGCACT | + |
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Preference number: 6 (lower is better) Translates to: QTSASCRGWALL*MIRSESSTEGT Trigger: AGTGCCTTCAGTGCTCGATTCAGACCTTATCATCCAGAGCAACGCCCAACCACGGCAGCTGGCACTAGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 72 bp | CAGCTTTCTCGTTGGCACTCTTCCCAGAATGGTCAGTaGCGTTGTACTCGAACTCCGAAGGGCACTGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: QLSRWHSSQNGQ*RCTRTPKGTAD Trigger: ATCAGCAGTGCCCTTCGGAGTTCGAGTACAACGCCACTGACCATTCTGGGAAGAGTGCCAACGAGAAAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CAA 72 bp | TCGGTCCAAACTAGTGCCAGCTGCCGTGGTTGGGCGTaGCTCTGGATGATAAGGTCTGAATCGAGCACTGAA | + |
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Preference number: 6 (lower is better) Translates to: SVQTSASCRGWA*LWMIRSESSTE Trigger: TTCAGTGCTCGATTCAGACCTTATCATCCAGAGCAACGCCCAACCACGGCAGCTGGCACTAGTTTGGACCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CAA 90 bp | AGTAACCAGTCGGTCCAAACTAGTGCCAGCTGCCGTGGTTGGGCGTaGCTCTGGATGATAAGGTCTGAATCGAGCACTGAAGGCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: SNQSVQTSASCRGWA*LWMIRSESSTEGTF Trigger: GAAAGTGCCTTCAGTGCTCGATTCAGACCTTATCATCCAGAGCAACGCCCAACCACGGCAGCTGGCACTAGTTTGGACCGACTGGTTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 72 bp | AGATCATCTTCAGCAGTGCATGGGTGCACTGAGCTGTaGGGTTCACCACGGACACTTTGCTTACTACATCCC | + |
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Preference number: 6 (lower is better) Translates to: RSSSAVHGCTEL*GSPRTLCLLHP Trigger: GGGATGTAGTAAGCAAAGTGTCCGTGGTGAACCCCACAGCTCAGTGCACCCATGCACTGCTGAAGATGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 72 bp | TGGTGTCAACCTGGACTTCTGGGTTGTTGCCCTGGTTaGCCAATCCATTTCCTGTCACTGCAAACAGGTACC | + |
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Preference number: 6 (lower is better) Translates to: WCQPGLLGCCPG*PIHFLSLQTGT Trigger: GGTACCTGTTTGCAGTGACAGGAAATGGATTGGCCAACCAGGGCAACAACCCAGAAGTCCAGGTTGACACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 72 bp | CCGAAGGGCCATGATCTGACGAAGGATCAGTATGTCTaGCTTGCTGGTGTCAACCTGGACTTCTGGGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PKGHDLTKDQYV*LAGVNLDFWVV Trigger: AACAACCCAGAAGTCCAGGTTGACACCAGCAAGCCAGACATACTGATCCTTCGTCAGATCATGGCCCTTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CAA 72 bp | CTGGTGTCAACCTGGACTTCTGGGTTGTTGCCCTGGTaGGCCAATCCATTTCCTGTCACTGCAAACAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: LVSTWTSGLLPW*ANPFPVTANRY Trigger: GTACCTGTTTGCAGTGACAGGAAATGGATTGGCCAACCAGGGCAACAACCCAGAAGTCCAGGTTGACACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CAA 90 bp | ACTGAGCTGTGGGGTTCACCACGGACACTTTGCTTACTACATCCCTaGCAACTGCTAAGCCTTGAGCGAAGGTCCTGGCTGCAACAAATG | + |
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Preference number: 6 (lower is better) Translates to: TELWGSPRTLCLLHP*QLLSLERRSWLQQM Trigger: CATTTGTTGCAGCCAGGACCTTCGCTCAAGGCTTAGCAGTTGCAAGGGATGTAGTAAGCAAAGTGTCCGTGGTGAACCCCACAGCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS TCA 72 bp | ACTTTGCTTACTACATCCCTTGCAACTGCTAAGCCTTaGGCGAAGGTCCTGGCTGCAACAAATGCGCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: TLLTTSLATAKP*AKVLAATNARV Trigger: TACCCGCGCATTTGTTGCAGCCAGGACCTTCGCTCAAGGCTTAGCAGTTGCAAGGGATGTAGTAAGCAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS TCA 72 bp | GTCTCCTTGGTTGGCCAAACAGCCTCGCATGATGTTTaGGCAATAGTTGTAACAGGGCTTCACAGTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: VSLVGQTASHDV*AIVVTGLHSHQ Trigger: CTGGTGACTGTGAAGCCCTGTTACAACTATTGCTCAAACATCATGCGAGGCTGTTTGGCCAACCAAGGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 72 bp | TCCTGCTGCCATCCTCTCATCATTGCAAACGGTGCTTaGGAGAGAGGACCAGAACTTCTTAGCTTGTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SCCHPLIIANGA*ERGPELLSLFQ Trigger: CTGAAACAAGCTAAGAAGTTCTGGTCCTCTCTCCCAAGCACCGTTTGCAATGATGAGAGGATGGCAGCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS TCA 72 bp | AATCAAGGTCTCCTTGGTTGGCCAAACAGCCTCGCATaGTGTTTGAGCAATAGTTGTAACAGGGCTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: NQGLLGWPNSLA*CLSNSCNRASQ Trigger: CTGTGAAGCCCTGTTACAACTATTGCTCAAACATCATGCGAGGCTGTTTGGCCAACCAAGGAGACCTTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS TCA 72 bp | TTCATTTTACTGGTCATAACCCGAAGGGCCATGATCTaGCGAAGGATCAGTATGTCTGGCTTGCTGGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: FILLVITRRAMI*RRISMSGLLVS Trigger: TGACACCAGCAAGCCAGACATACTGATCCTTCGTCAGATCATGGCCCTTCGGGTTATGACCAGTAAAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CAA 72 bp | GAGGACCAGAACTTCTTAGCTTGTTTCAGTTTCTCCTaGACATCAGTAACCAGTCGGTCCAAACTAGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: EDQNFLACFSFS*TSVTSRSKLVP Trigger: TGGCACTAGTTTGGACCGACTGGTTACTGATGTCAAGGAGAAACTGAAACAAGCTAAGAAGTTCTGGTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CAA 90 bp | GCAAAGATGGCTTGCAAATGGTTGCACTGTTCGCTGACCACGGTTTaGAAATCATCTTTACTTTGCAGGCTGTACTTCTCTTCCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: AKMACKWLHCSLTTV*KSSLLCRLYFSSIS Trigger: AGAGATGGAAGAGAAGTACAGCCTGCAAAGTAAAGATGATTTCAAAACCGTGGTCAGCGAACAGTGCAACCATTTGCAAGCCATCTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CAA 72 bp | GCTTGCAAATGGTTGCACTGTTCGCTGACCACGGTTTaGAAATCATCTTTACTTTGCAGGCTGTACTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ACKWLHCSLTTV*KSSLLCRLYFS Trigger: AGAGAAGTACAGCCTGCAAAGTAAAGATGATTTCAAAACCGTGGTCAGCGAACAGTGCAACCATTTGCAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CAA 72 bp | TTCATCAAACTTCTTGTAACGGGATGCAAAGATGGCTaGCAAATGGTTGCACTGTTCGCTGACCACGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: FIKLLVTGCKDG*QMVALFADHGF Trigger: AAAACCGTGGTCAGCGAACAGTGCAACCATTTGCAAGCCATCTTTGCATCCCGTTACAAGAAGTTTGATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CCA 72 bp | TCTATGAAATTGTTCCACTCAAAATCAAGGTCTCCTTaGTTGGCCAAACAGCCTCGCATGATGTTTGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: SMKLFHSKSRSP*LAKQPRMMFEQ Trigger: TTGCTCAAACATCATGCGAGGCTGTTTGGCCAACCAAGGAGACCTTGATTTTGAGTGGAACAATTTCATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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| CDS CAA 90 bp | TTTGAAGAATTCATCAAACTTCTTGTAACGGGATGCAAAGATGGCTaGCAAATGGTTGCACTGTTCGCTGACCACGGTTTTGAAATCATC | + |
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Preference number: 6 (lower is better) Translates to: FEEFIKLLVTGCKDG*QMVALFADHGFEII Trigger: GATGATTTCAAAACCGTGGTCAGCGAACAGTGCAACCATTTGCAAGCCATCTTTGCATCCCGTTACAAGAAGTTTGATGAATTCTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033450.3 |
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