Pregenerated sensors for GPC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055653Ensembl transcript IDs: ENSMUST00000069360.14, ENSMUST00000114857.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGAATATGCAGTTCTTCATGGGCTTCAAAATGAGCAAATTCTCTaGGAGCTACAAGTTATATACAGCATTTGGACCATCATAAATAAA | + |
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Preference number: 1 (lower is better) Translates to: PEYAVLHGLQNEQIL*ELQVIYSIWTIINK Trigger: TTTATTTATGATGGTCCAAATGCTGTATATAACTTGTAGCTCTCAGAGAATTTGCTCATTTTGAAGCCCATGAAGAACTGCATATTCAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| 3UTR-3UTR GCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATATGTAGGGACCACAGGTaGTGCAGGGCAGCACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RKHNTRLVSYLMVVGGGICRDHR*CRAAQA Trigger: TGCCTGTGCTGCCCTGCAGCACCTGTGGTCCCTACA...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| 3UTR-3UTR GCA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAAAGGGACCACAGGTGCTaGAGGGCAGCACAGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKRDHRC*RAAQAL Trigger: CAGTGCCTGTGCTGCCCTGCAGCACCTGTGGTCCCT...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| 3UTR-3UTR TCA 90 bp | ATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTTCCAAGATGAAAATAACTaGAGACGGAGAAAAGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: MQSSLPITESSQHEYDCFQDENN*RRRKVH Trigger: GTGAACTTTTCTCCGTCTTCAGTTATTTTCATCTTG...GAAACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTTCATATTTGTCAAATATCCCTaGATATGCAGTTCTTCATGG | + |
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Preference number: 2 (lower is better) Translates to: QSSLPITESSQHEYDCFIFVKYP*ICSSSW Trigger: CCATGAAGAACTGCATATTCAGGGATATTTGACAAA...TATGAAACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| 3UTR GCA 72 bp | AAAAGAAGGTGGCTCCCTTTCTGTAGGGACCACAGGTaGTGCAGGGCAGCACAGGCACTGGACGCTGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: KRRWLPFCRDHR*CRAAQALDAGK Trigger: CTTGCCAGCGTCCAGTGCCTGTGCTGCCCTGCAGCACCTGTGGTCCCTACAGAAAGGGAGCCACCTTCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAAGAACGGACCTGGTaGCAGGTGGCGTCTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIKERTW*QVASGG Trigger: GCCTCCAGACGCCACCTGTCACCAGGTCCGTTCTTT...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR GCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATACCACGGGGCTATGGCTaGAGATGTAGCCCGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIPRGYG*RCSPAK Trigger: CTTTGCCGGGCTACATCTGCAGCCATAGCCCCGTGG...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAATGTTCCCCACGCTGTaGGAGGTGGTGATCTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIMFPTL*EVVISL Trigger: CAACGAGATCACCACCTCTCACAGCGTGGGGAACAT...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCTGGCGTTGCTGGGAGTaGGCACACAACTTGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGWRCWE*AHNLPM Trigger: CATTGGCAAGTTGTGTGCCCACTCCCAGCAACGCCA...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCCTCGGAGGCACTCGTTaGTGTCTAAGACTGACTCAG | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGLGGTR*CLRLTQ Trigger: CTGAGTCAGTCTTAGACATCAACGAGTGCCTCCGAG...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAATACCACATTCGGGTaGGCATACGGCCACAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGINTTFG*AYGHSP Trigger: AGGACTGTGGCCGTATGCTCACCCGAATGTGGTATT...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCCGCTGTGAGAGGTGGTaGTCTCGTTGTCCTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGRCERW*SRCPSD Trigger: ATCAGAAGGACAACGAGATCACCACCTCTCACAGCG...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR GCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCTTTCAGGTCACGTCTTaGTCCTCGGAGGCACTCGTT | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGFQVTS*SSEALV Trigger: AACGAGTGCCTCCGAGGAGCAAGACGTGACCTGAAA...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAACCGGGCTGCAGTCTCTaGAAGAAAGAACGGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKPGCSL*KKERTW Trigger: CCAGGTCCGTTCTTTCTTCCAGAGACTGCAGCCCGG...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATATCATCTGGGTGTAGATaGCTGGAAAGAGGCTGTCGA | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGISSGCR*LERGCR Trigger: TCGACAGCCTCTTTCCAGTCATCTACACCCAGATGA...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATATCGAGTGACTTGCAGTaGCTTGGAAACCTGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGISSDLQ*LGNLGH Trigger: ATGACCCAGGTTTCCAAGTCACTGCAAGTCACTCGA...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCCCGAGATTCAGGGCTTaGAGGAAGATTCGAGTGACT | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGPRFRA*RKIRVT Trigger: AGTCACTCGAATCTTCCTTCAAGCCCTGAATCTCGG...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR GCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAGATCTATATTGGCGTTaGTGGGAGTGGGCACACAAC | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIDLYWR*WEWAHN Trigger: GTTGTGTGCCCACTCCCAGCAACGCCAATATAGATC...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCCTATATTGGCGTTGCTaGGAGTGGGCACACAACTTG | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGLYWRC*EWAHNL Trigger: CAAGTTGTGTGCCCACTCCCAGCAACGCCAATATAG...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCAGTTTGTCAATGATCTaGCTAACCACCGGCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGSLSMI*LTTGSG Trigger: CCCTGAGCCGGTGGTTAGCCAGATCATTGACAAACT...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | GTAATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTAAAGAACGGACCTGGTaGCAGGTGGCGTCTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VMQSSLPITESSQHEYDCKERTW*QVASGG Trigger: GCCTCCAGACGCCACCTGTCACCAGGTCCGTTCTTT...ACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCATTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR TCA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAATTTCTGGAACCCATTTaGGTCCGGGCTGCAGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKFLEPI*VRAAVS Trigger: AGAGACTGCAGCCCGGACTCAAATGGGTTCCAGAAA...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCTTCTTCCATCTTTCTTaGGCAGCATGTTGGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGFFHLS*AACWAL Trigger: AAGGGCCCAACATGCTGCTCAAGAAAGATGGAAGAA...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR GCA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAATGGTGGTGGTCAGCTTaGCTCCGTTCTTCTGCACAT | + |
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Preference number: 4 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKWWWSA*LRSSAH Trigger: ATGTGCAGAAGAACGGAGGCAAGCTGACCACCACCA...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR GCA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAACTTCATCCCGTTCCTTaGCGCCTTCTGGCTGTATCT | + |
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Preference number: 4 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKLHPVP*RLLAVS Trigger: AGATACAGCCAGAAGGCGGCAAGGAACGGGATGAAG...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAATGGTACAGGGGTTTCTaGAACCCATTTGAGTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKWYRGF*NPFESG Trigger: CCCGGACTCAAATGGGTTCCAGAAACCCCTGTACCA...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAGCATGTTGGGCCCTTaGGGAGACATACTTGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGISMLGP*GDILAN Trigger: ATTTGCAAGTATGTCTCCCCAAGGGCCCAACATGCT...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATATCCATACTCGCAGACTaGAGCAGTTGTTCCATGTTC | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGISILAD*SSCSMF Trigger: GAACATGGAACAACTGCTCCAGTCTGCGAGTATGGA...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATACTGGGTGTAGATGACTaGAAAGAGGCTGTCGAACAA | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGILGVDD*KEAVEQ Trigger: TTGTTCGACAGCCTCTTTCCAGTCATCTACACCCAG...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCGAAGGAAGATTCGAGTaGCTTGCAGTGACTTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGEGRFE*LAVTWK Trigger: TTTCCAAGTCACTGCAAGTCACTCGAATCTTCCTTC...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR GCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAGATTCGAGTGACTTaGAGTGACTTGGAAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIKIRVT*SDLETW Trigger: CCAGGTTTCCAAGTCACTGCAAGTCACTCGAATCTT...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAGTGACTTGGAAACCTaGGTCATAATAAGCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGISDLET*VIISLG Trigger: CCCCAAGCTTATTATGACCCAGGTTTCCAAGTCACT...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCCCATATCATCCACGTTaGTATCAGAACCCAAGATGT | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGPYHPR*YQNPRC Trigger: ACATCTTGGGTTCTGATATCAACGTGGATGATATGG...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAACCATACAGCCTTGCATaGCCACATTGCAATAACCAC | + |
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Preference number: 4 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKPYSLA*PHCNNH Trigger: GTGGTTATTGCAATGTGGTCATGCAAGGCTGTATGG...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCAAAGACTTCAGTTTCTaGATCAGTTCCCTTCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGKDFSF*ISSLLR Trigger: CCGAAGAAGGGAACTGATTCAGAAACTGAAGTCTTT...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAAGCAAGGAAGCGCAGTTaGTTCTTCACTTTCACCATC | + |
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Preference number: 4 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKARKRS*FFTFTI Trigger: GATGGTGAAAGTGAAGAATCAACTGCGCTTCCTTGC...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR GCA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAACATTTGAGTCCGGGCTaGAGTCTCTGGAAGAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKHLSPG*SLWKKE Trigger: TTCTTTCTTCCAGAGACTGCAGCCCGGACTCAAATG...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR GCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCTTGGGGAGACATACTTaGAAATCTGATCCTGGTACA | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGLGRHT*KSDPGT Trigger: TGTACCAGGATCAGATTTGCAAGTATGTCTCCCCAA...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR GCA 90 bp | GGAAGGCAATTTAATCAATCTTCGGATATGATTAGTTGTCAAATGTTGCTACACCCACGGGGCTATGGCTaGAGATGTAGCCCGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GRQFNQSSDMISCQMLLHPRGYG*RCSPAK Trigger: CTTTGCCGGGCTACATCTGCAGCCATAGCCCCGTGG...GTGTAGCAACATTTGACAACTAATCATATCCGAAGATTGATTAAATTGCCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR GCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCCACCAGAGCTTCCAATaGATTCATCTTCATCATCAC | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGHQSFQ*IHLHHH Trigger: GTGATGATGAAGATGAATGCATTGGAAGCTCTGGTG...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAGTTCCCTTCTTCGGCTaGATAAGGTTTCTTCATGTT | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIVPFFG*IRFLHV Trigger: AACATGAAGAAACCTTATCCAGCCGAAGAAGGGAAC...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATGGTTCTCAGGAGCTaGTTAATGTGCTTCAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGMVLRS*LMCFSL Trigger: CAAACTGAAGCACATTAACCAGCTCCTGAGAACCAT...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR TCA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAAATCTCGTTGTCCTTCTaGTTTCCATGCTGCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKISLSF*FPCCLF Trigger: GAACAAGCAGCATGGAAATCAGAAGGACAACGAGAT...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR GCA 90 bp | TGGTGTGTAATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATCTATATTGGCGTTaGTGGGAGTGGGCACACAAC | + |
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Preference number: 4 (lower is better) Translates to: WCVMQSSLPITESSQHEYDLYWR*WEWAHN Trigger: GTTGTGTGCCCACTCCCAGCAACGCCAATATAGATC...ATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCATTACACACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR GCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAGGAGCTGGTTAATGTaGTTCAGTTTGTCAATGATC | + |
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Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIRSWLM*FSLSMI Trigger: GATCATTGACAAACTGAAGCACATTAACCAGCTCCT...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | CGGAGAAAAGTTCACCATATGCTTTATACTTTGTCAAATATCCCTGAATATGCACCGGGCTGCAGTCTCTaGAAGAAAGAACGGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRKVHHMLYTLSNIPEYAPGCSL*KKERTW Trigger: CCAGGTCCGTTCTTTCTTCCAGAGACTGCAGCCCGG...TGCATATTCAGGGATATTTGACAAAGTATAAAGCATATGGTGAACTTTTCTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR CCA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAAAAACTCAAAAGCTTGTaGAGTCAGGCTGGGGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKKLKSL*SQAGVV Trigger: AACTACCCCAGCCTGACTCCACAAGCTTTTGAGTTT...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATATTCTTCTGCACATACTaGATGGAATCATGGATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIFFCTY*MESWMV Trigger: TACCATCCATGATTCCATCCAGTATGTGCAGAAGAA...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CCA 90 bp | CAGTTCTTCATGGGCTTCAAAATGAGCAAATTCTCTGAGAGCTACAAGTTATATTGGCGTTGCTGGGAGTaGGCACACAACTTGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QFFMGFKMSKFSESYKLYWRCWE*AHNLPM Trigger: CATTGGCAAGTTGTGTGCCCACTCCCAGCAACGCCA...ATATAACTTGTAGCTCTCAGAGAATTTGCTCATTTTGAAGCCCATGAAGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTGTCAAATATCCCTGAATATGCAGTTCTTCATGGGCTTCAAAATGAGCAATTTCTGGAACCCATTTaGGTCCGGGCTGCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSNIPEYAVLHGLQNEQFLEPI*VRAAVS Trigger: AGAGACTGCAGCCCGGACTCAAATGGGTTCCAGAAA...TTGCTCATTTTGAAGCCCATGAAGAACTGCATATTCAGGGATATTTGACAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR TCA 90 bp | CAGTTCTTCATGGGCTTCAAAATGAGCAAATTCTCTGAGAGCTACAAGTTATATCTCGGAGGCACTCGTTaGTGTCTAAGACTGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QFFMGFKMSKFSESYKLYLGGTR*CLRLTQ Trigger: CTGAGTCAGTCTTAGACATCAACGAGTGCCTCCGAG...ATATAACTTGTAGCTCTCAGAGAATTTGCTCATTTTGAAGCCCATGAAGAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR TCA 90 bp | GTAATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTCGAGTGACTTGCAGTaGCTTGGAAACCTGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VMQSSLPITESSQHEYDCSSDLQ*LGNLGH Trigger: ATGACCCAGGTTTCCAAGTCACTGCAAGTCACTCGA...ACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR TCA 90 bp | CAGTTCTTCATGGGCTTCAAAATGAGCAAATTCTCTGAGAGCTACAAGTTATATAATACCACATTCGGGTaGGCATACGGCCACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QFFMGFKMSKFSESYKLYNTTFG*AYGHSP Trigger: AGGACTGTGGCCGTATGCTCACCCGAATGTGGTATT...ATATAACTTGTAGCTCTCAGAGAATTTGCTCATTTTGAAGCCCATGAAGAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGTGTAATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATCCATACAGCCTTGCATaGCCACATTGCAATAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: WCVMQSSLPITESSQHEYPYSLA*PHCNNH Trigger: GTGGTTATTGCAATGTGGTCATGCAAGGCTGTATGG...ATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCATTACACACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR TCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATATCTTCATGTTCGACATaGGCGACTTTTAATATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGISSCST*ATFNIF Trigger: GAAGATATTAAAAGTCGCTCATGTCGAACATGAAGA...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR TCA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAATCATGGAGGTTAAACTaGTTCTTCATCCCGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKSWRLN*FFIPFL Trigger: AAGGAACGGGATGAAGAATCAGTTTAACCTCCATGA...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CCA 90 bp | CAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTTCATATGGTACAGGGGTTTCTaGAACCCATTTGAGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSSLPITESSQHEYDCFIWYRGF*NPFESG Trigger: CCCGGACTCAAATGGGTTCCAGAAACCCCTGTACCA...TATGAAACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CCA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAGCCGTGCTGTTAGTTaGTATTTTTCTTCCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKHNTRLVSYLMVVGGGISRAVS*YFSSIF Trigger: AAAGATGGAAGAAAAATACCAACTAACAGCACGGCT...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR TCA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAAAGAGAGACACATCTGTaGAAAATTCACCGACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKRETHL*KIHRQT Trigger: AGTTTGTCGGTGAATTTTTCACAGATGTGTCTCTCT...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR TCA 90 bp | CACCATATGCTTTATACTTTGTCAAATATCCCTGAATATGCAGTTCTTCATGGGCCGAGATTCAGGGCTTaGAGGAAGATTCGAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: HHMLYTLSNIPEYAVLHGPRFRA*RKIRVT Trigger: AGTCACTCGAATCTTCCTTCAAGCCCTGAATCTCGG...CCCATGAAGAACTGCATATTCAGGGATATTTGACAAAGTATAAAGCATATGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR GCA 90 bp | ATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTTCCATTTGAGTCCGGGCTaGAGTCTCTGGAAGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MQSSLPITESSQHEYDCFHLSPG*SLWKKE Trigger: TTCTTTCTTCCAGAGACTGCAGCCCGGACTCAAATG...GAAACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR GCA 90 bp | CGGAGAAAAGTTCACCATATGCTTTATACTTTGTCAAATATCCCTGAATATGCATGGTGGTGGTCAGCTTaGCTCCGTTCTTCTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RRKVHHMLYTLSNIPEYAWWWSA*LRSSAH Trigger: ATGTGCAGAAGAACGGAGGCAAGCTGACCACCACCA...TGCATATTCAGGGATATTTGACAAAGTATAAAGCATATGGTGAACTTTTCTCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CCA 90 bp | ATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTTCTCCATACTCGCAGACTaGAGCAGTTGTTCCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MQSSLPITESSQHEYDCFSILAD*SSCSMF Trigger: GAACATGGAACAACTGCTCCAGTCTGCGAGTATGGA...GAAACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR TCA 90 bp | GGAAGGCAATTTAATCAATCTTCGGATATGATTAGTTGTCAAATGTTGCTACACTCATCTGGGTGTAGATaGCTGGAAAGAGGCTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GRQFNQSSDMISCQMLLHSSGCR*LERGCR Trigger: TCGACAGCCTCTTTCCAGTCATCTACACCCAGATGA...GTGTAGCAACATTTGACAACTAATCATATCCGAAGATTGATTAAATTGCCTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR TCA 90 bp | GTAATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTGAAGGAAGATTCGAGTaGCTTGCAGTGACTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VMQSSLPITESSQHEYDCEGRFE*LAVTWK Trigger: TTTCCAAGTCACTGCAAGTCACTCGAATCTTCCTTC...ACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR GCA 90 bp | GTAATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTAAGATTCGAGTGACTTaGAGTGACTTGGAAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VMQSSLPITESSQHEYDCKIRVT*SDLETW Trigger: CCAGGTTTCCAAGTCACTGCAAGTCACTCGAATCTT...ACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTGTCAAATATCCCTGAATATGCAGTTCTTCATGGGCTTCAAAATGAGCAACTGGGTGTAGATGACTaGAAAGAGGCTGTCGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: TLSNIPEYAVLHGLQNEQLGVDD*KEAVEQ Trigger: TTGTTCGACAGCCTCTTTCCAGTCATCTACACCCAG...TTGCTCATTTTGAAGCCCATGAAGAACTGCATATTCAGGGATATTTGACAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGCAATTTAATCAATCTTCGGATATGATTAGTTGTCAAATGTTGCTACACCTATATTGGCGTTGCTaGGAGTGGGCACACAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRQFNQSSDMISCQMLLHLYWRC*EWAHNL Trigger: CAAGTTGTGTGCCCACTCCCAGCAACGCCAATATAG...GTGTAGCAACATTTGACAACTAATCATATCCGAAGATTGATTAAATTGCCTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR TCA 90 bp | GTAATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTCCATATCATCCACGTTaGTATCAGAACCCAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: VMQSSLPITESSQHEYDCPYHPR*YQNPRC Trigger: ACATCTTGGGTTCTGATATCAACGTGGATGATATGG...ACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCATTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR GCA 90 bp | ATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTTCTTGGGGAGACATACTTaGAAATCTGATCCTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: MQSSLPITESSQHEYDCFLGRHT*KSDPGT Trigger: TGTACCAGGATCAGATTTGCAAGTATGTCTCCCCAA...GAAACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR CCA 90 bp | CACCATATGCTTTATACTTTGTCAAATATCCCTGAATATGCAGTTCTTCATGGGAAACTCAAAAGCTTGTaGAGTCAGGCTGGGGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HHMLYTLSNIPEYAVLHGKLKSL*SQAGVV Trigger: AACTACCCCAGCCTGACTCCACAAGCTTTTGAGTTT...CCCATGAAGAACTGCATATTCAGGGATATTTGACAAAGTATAAAGCATATGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR CCA 90 bp | CACCATATGCTTTATACTTTGTCAAATATCCCTGAATATGCAGTTCTTCATGGGAGTGACTTGGAAACCTaGGTCATAATAAGCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HHMLYTLSNIPEYAVLHGSDLET*VIISLG Trigger: CCCCAAGCTTATTATGACCCAGGTTTCCAAGTCACT...CCCATGAAGAACTGCATATTCAGGGATATTTGACAAAGTATAAAGCATATGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR CCA 90 bp | CAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTTCATAGTTCCCTTCTTCGGCTaGATAAGGTTTCTTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: QSSLPITESSQHEYDCFIVPFFG*IRFLHV Trigger: AACATGAAGAAACCTTATCCAGCCGAAGAAGGGAAC...TATGAAACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR TCA 90 bp | CGGAGAAAAGTTCACCATATGCTTTATACTTTGTCAAATATCCCTGAATATGCAAAAGACTTCAGTTTCTaGATCAGTTCCCTTCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RRKVHHMLYTLSNIPEYAKDFSF*ISSLLR Trigger: CCGAAGAAGGGAACTGATTCAGAAACTGAAGTCTTT...TGCATATTCAGGGATATTTGACAAAGTATAAAGCATATGGTGAACTTTTCTCCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGGCAATTTAATCAATCTTCGGATATGATTAGTTGTCAAATGTTGCTACACAGAGAGACACATCTGTaGAAAATTCACCGACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GRQFNQSSDMISCQMLLHRETHL*KIHRQT Trigger: AGTTTGTCGGTGAATTTTTCACAGATGTGTCTCTCT...GTGTAGCAACATTTGACAACTAATCATATCCGAAGATTGATTAAATTGCCTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR TCA 90 bp | ACTTTGTCAAATATCCCTGAATATGCAGTTCTTCATGGGCTTCAAAATGAGCAATCTTCATGTTCGACATaGGCGACTTTTAATATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLSNIPEYAVLHGLQNEQSSCST*ATFNIF Trigger: GAAGATATTAAAAGTCGCTCATGTCGAACATGAAGA...TTGCTCATTTTGAAGCCCATGAAGAACTGCATATTCAGGGATATTTGACAAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS-3UTR CCA 90 bp | CAGTTCTTCATGGGCTTCAAAATGAGCAAATTCTCTGAGAGCTACAAGTTATATAGCCGTGCTGTTAGTTaGTATTTTTCTTCCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QFFMGFKMSKFSESYKLYSRAVS*YFSSIF Trigger: AAAGATGGAAGAAAAATACCAACTAACAGCACGGCT...ATATAACTTGTAGCTCTCAGAGAATTTGCTCATTTTGAAGCCCATGAAGAACTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CCA 90 bp | CGGAGAAAAGTTCACCATATGCTTTATACTTTGTCAAATATCCCTGAATATGCATTCTTCTGCACATACTaGATGGAATCATGGATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RRKVHHMLYTLSNIPEYAFFCTY*MESWMV Trigger: TACCATCCATGATTCCATCCAGTATGTGCAGAAGAA...TGCATATTCAGGGATATTTGACAAAGTATAAAGCATATGGTGAACTTTTCTCCG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
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| CDS TCA 90 bp | CATTTGAGTCCGGGCTGCAGTCTCTGGAAGAAAGAACGGACCTGGTaGCAGGTGGCGTCTGGAGGCGGCGGGGGCTGCGCCTGTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLSPGCSLWKKERTW*QVASGGGGGCACPR Trigger: CCTGGGACAGGCGCAGCCCCCGCCGCCTCCAGACGCCACCTGTCACCAGGTCCGTTCTTTCTTCCAGAGACTGCAGCCCGGACTCAAATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS TCA 90 bp | TGCCAAATACTTTCAGGTCACGTCTTGCTCCTCGGAGGCACTCGTTaGTGTCTAAGACTGACTCAGGCAGGCCTGGGTTCATCATCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CQILSGHVLLLGGTR*CLRLTQAGLGSSSG Trigger: CCCAGATGATGAACCCAGGCCTGCCTGAGTCAGTCTTAGACATCAACGAGTGCCTCCGAGGAGCAAGACGTGACCTGAAAGTATTTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS TCA 90 bp | ACCACCGGCTCAGGGCCCTTCATTTTCAGCTCATGGAGGTTAAACTaGTTCTTCATCCCGTTCCTTGCCGCCTTCTGGCTGTATCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTGSGPFIFSSWRLN*FFIPFLAAFWLYLS Trigger: GGAGAGATACAGCCAGAAGGCGGCAAGGAACGGGATGAAGAATCAGTTTAACCTCCATGAGCTGAAAATGAAGGGCCCTGAGCCGGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS-3UTR CAA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATACGCAGACTGGAGCAGTaGTTCCATGTTCAGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIRRLEQ*FHVQPC Trigger: GCACGGCTGAACATGGAACAACTGCTCCAGTCTGCG...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCCTTTCAGGTCACGTCTaGCTCCTCGGAGGCACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGLSGHV*LLGGTR Trigger: ACGAGTGCCTCCGAGGAGCAAGACGTGACCTGAAAG...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS TCA 90 bp | ATACTTGCAAATCTGATCCTGGTACAGGGGTTTCTGGAACCCATTTaGGTCCGGGCTGCAGTCTCTGGAAGAAAGAACGGACCTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ILANLILVQGFLEPI*VRAAVSGRKNGPGD Trigger: GTCACCAGGTCCGTTCTTTCTTCCAGAGACTGCAGCCCGGACTCAAATGGGTTCCAGAAACCCCTGTACCAGGATCAGATTTGCAAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAGTTTCTGGAACCCATTaGAGTCCGGGCTGCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIVSGTH*SPGCSL Trigger: GAGACTGCAGCCCGGACTCAAATGGGTTCCAGAAAC...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAATGGTGGTGGTCAGCTaGCCTCCGTTCTTCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIMVVVS*PPFFCT Trigger: TGTGCAGAAGAACGGAGGCAAGCTGACCACCACCAT...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS CCA 90 bp | ATGGTTCTCAGGAGCTGGTTAATGTGCTTCAGTTTGTCAATGATCTaGCTAACCACCGGCTCAGGGCCCTTCATTTTCAGCTCATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MVLRSWLMCFSLSMI*LTTGSGPFIFSSWR Trigger: CCTCCATGAGCTGAAAATGAAGGGCCCTGAGCCGGTGGTTAGCCAGATCATTGACAAACTGAAGCACATTAACCAGCTCCTGAGAACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCCAGCATGTTGGGCCCTaGGGGAGACATACTTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGQHVGP*GRHTCK Trigger: TTTGCAAGTATGTCTCCCCAAGGGCCCAACATGCTG...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATACCTCGGAGGCACTCGTaGATGTCTAAGACTGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIPRRHS*MSKTDS Trigger: TGAGTCAGTCTTAGACATCAACGAGTGCCTCCGAGG...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS GCA 90 bp | TCCATCTTTCTTGAGCAGCATGTTGGGCCCTTGGGGAGACATACTTaGAAATCTGATCCTGGTACAGGGGTTTCTGGAACCCATTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SIFLEQHVGPLGRHT*KSDPGTGVSGTHLS Trigger: ACTCAAATGGGTTCCAGAAACCCCTGTACCAGGATCAGATTTGCAAGTATGTCTCCCCAAGGGCCCAACATGCTGCTCAAGAAAGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
||
| CDS CCA 90 bp | CTCGCAGACTGGAGCAGTTGTTCCATGTTCAGCCGTGCTGTTAGTTaGTATTTTTCTTCCATCTTTCTTGAGCAGCATGTTGGGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LADWSSCSMFSRAVS*YFSSIFLEQHVGPL Trigger: CAAGGGCCCAACATGCTGCTCAAGAAAGATGGAAGAAAAATACCAACTAACAGCACGGCTGAACATGGAACAACTGCTCCAGTCTGCGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAGATCTATATTGGCGTaGCTGGGAGTGGGCACACAA | + |
|
Preference number: 5 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIRSILA*LGVGTQ Trigger: TTGTGTGCCCACTCCCAGCAACGCCAATATAGATCT...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAATTCTTGAGCAGCATGTaGGGCCCTTGGGGAGACATA | + |
|
Preference number: 5 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKFLSSM*GPWGDI Trigger: TATGTCTCCCCAAGGGCCCAACATGCTGCTCAAGAA...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATATTTCTTCCATCTTTCTaGAGCAGCATGTTGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RKHNTRLVSYLMVVGGGIFLPSF*SSMLGP Trigger: AGGGCCCAACATGCTGCTCAAGAAAGATGGAAGAAA...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGTAATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATCTTTCAGGTCACGTCTaGCTCCTCGGAGGCACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WCVMQSSLPITESSQHEYLSGHV*LLGGTR Trigger: ACGAGTGCCTCCGAGGAGCAAGACGTGACCTGAAAG...ATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCATTACACACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCAGGTGGTCGGTAGTGTaGATGACTTCAATTCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGRWSVV*MTSIPR Trigger: TCTCGGAATTGAAGTCATCAACACTACCGACCACCT...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAACCAGCCATACAGCCTaGCATGACCACATTGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: RKHNTRLVSYLMVVGGGITSHTA*HDHIAI Trigger: TATTGCAATGTGGTCATGCAAGGCTGTATGGCTGGT...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS CCA 90 bp | GTTGGTATTTTTCTTCCATCTTTCTTGAGCAGCATGTTGGGCCCTTaGGGAGACATACTTGCAAATCTGATCCTGGTACAGGGGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGIFLPSFLSSMLGP*GDILANLILVQGFL Trigger: CAGAAACCCCTGTACCAGGATCAGATTTGCAAGTATGTCTCCCCAAGGGCCCAACATGCTGCTCAAGAAAGATGGAAGAAAAATACCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAAGACAAACTCAAAAGCTaGTGGAGTCAGGCTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKDKLKS*WSQAGV Trigger: TACCCCAGCCTGACTCCACAAGCTTTTGAGTTTGTC...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAATCCGAGATTCAGGGCTaGAAGGAAGATTCGAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKSEIQG*KEDSSD Trigger: GTCACTCGAATCTTCCTTCAAGCCCTGAATCTCGGA...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAAATAAGCAGATCTATATaGGCGTTGCTGGGAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKISRSI*ALLGVG Trigger: GCCCACTCCCAGCAACGCCAATATAGATCTGCTTAT...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS TCA 90 bp | CGACAAACTCAAAAGCTTGTGGAGTCAGGCTGGGGTAGTTATTCTTaGACATGGCGTTGGTGTAGTTCTTGGCATGGCGAACAACAATTT | + |
|
Preference number: 5 (lower is better) Translates to: RQTQKLVESGWGSYS*TWRWCSSWHGEQQF Trigger: AAATTGTTGTTCGCCATGCCAAGAACTACACCAACGCCATGTTCAAGAATAACTACCCCAGCCTGACTCCACAAGCTTTTGAGTTTGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
||
| CDS TCA 90 bp | AATTCCGAGATTCAGGGCTTGAAGGAAGATTCGAGTGACTTGCAGTaGCTTGGAAACCTGGGTCATAATAAGCTTGGGGAAACTGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: NSEIQGLKEDSSDLQ*LGNLGHNKLGETAK Trigger: TTTGGCAGTTTCCCCAAGCTTATTATGACCCAGGTTTCCAAGTCACTGCAAGTCACTCGAATCTTCCTTCAAGCCCTGAATCTCGGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | CGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATACTGTCGAACAATTCATaGACCATATCATCCACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKHNTRLVSYLMVVGGGILSNNS*TISSTL Trigger: CAACGTGGATGATATGGTCAATGAATTGTTCGACAG...TATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCTGGGTCATAATAAGCTaGGGGAAACTGCCAAATACT | + |
|
Preference number: 5 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGWVIIS*GKLPNT Trigger: AGTATTTGGCAGTTTCCCCAAGCTTATTATGACCCA...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAACAGTCCTTACTAAACTaGAGGTGGTCGGTAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKQSLLN*RWSVVL Trigger: CAACACTACCGACCACCTCAAGTTTAGTAAGGACTG...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAATATTCTCTCCAGTACTaGTCGATCTCCACCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKYSLQY*SISTTP Trigger: TGGTGTGGTGGAGATCGACAAGTACTGGAGAGAATA...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | CACCATATGCTTTATACTTTGTCAAATATCCCTGAATATGCAGTTCTTCATGGGGTTTCTGGAACCCATTaGAGTCCGGGCTGCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HHMLYTLSNIPEYAVLHGVSGTH*SPGCSL Trigger: GAGACTGCAGCCCGGACTCAAATGGGTTCCAGAAAC...CCCATGAAGAACTGCATATTCAGGGATATTTGACAAAGTATAAAGCATATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | CGGAGAAAAGTTCACCATATGCTTTATACTTTGTCAAATATCCCTGAATATGCACGCAGACTGGAGCAGTaGTTCCATGTTCAGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRKVHHMLYTLSNIPEYARRLEQ*FHVQPC Trigger: GCACGGCTGAACATGGAACAACTGCTCCAGTCTGCG...TGCATATTCAGGGATATTTGACAAAGTATAAAGCATATGGTGAACTTTTCTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAAAATTTCAAAGGCCTCTaGGAAAACCGCAGCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKNFKGL*ENRSIL Trigger: CAGAATGCTGCGGTTTTCCAAGAGGCCTTTGAAATT...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGTAATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGACAAACTCAAAAGCTaGTGGAGTCAGGCTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: WCVMQSSLPITESSQHEYDKLKS*WSQAGV Trigger: TACCCCAGCCTGACTCCACAAGCTTTTGAGTTTGTC...ATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCATTACACACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAAGTGACTTGCAGTGACTaGGAAACCTGGGTCATAATA | + |
|
Preference number: 5 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKVTCSD*ETWVII Trigger: TATTATGACCCAGGTTTCCAAGTCACTGCAAGTCAC...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | ACTTTGTCAAATATCCCTGAATATGCAGTTCTTCATGGGCTTCAAAATGAGCAAATGGTGGTGGTCAGCTaGCCTCCGTTCTTCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TLSNIPEYAVLHGLQNEQMVVVS*PPFFCT Trigger: TGTGCAGAAGAACGGAGGCAAGCTGACCACCACCAT...TTGCTCATTTTGAAGCCCATGAAGAACTGCATATTCAGGGATATTTGACAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | TTTCGAAAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCTTAATGTGCTTCAGTTaGTCAATGATCTGGCTAACC | + |
|
Preference number: 5 (lower is better) Translates to: FRKHNTRLVSYLMVVGGGLMCFS*SMIWLT Trigger: GGTTAGCCAGATCATTGACAAACTGAAGCACATTAA...GCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAATGCAAGGAAGCGCAGTaGATTCTTCACTTTCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKCKEAQ*ILHFHH Trigger: ATGGTGAAAGTGAAGAATCAACTGCGCTTCCTTGCA...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | TATAGAAGGAATAATGGTCCACCTAGTGACAAGATGAAAATAACTGAAGACGGACAGCATGTTGGGCCCTaGGGGAGACATACTTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: YRRNNGPPSDKMKITEDGQHVGP*GRHTCK Trigger: TTTGCAAGTATGTCTCCCCAAGGGCCCAACATGCTG...TCCGTCTTCAGTTATTTTCATCTTGTCACTAGGTGGACCATTATTCCTTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | AAACATAACACGCGGTTAGTCTCCTACTTAATGGTGGTGGGAGGAGGCATAAAAACCATATCATCCACGTaGATATCAGAACCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KHNTRLVSYLMVVGGGIKTISST*ISEPKM Trigger: CATCTTGGGTTCTGATATCAACGTGGATGATATGGT...TTTTATGCCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS-3UTR CAA 90 bp | GTAATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTTTCTTCCATCTTTCTaGAGCAGCATGTTGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VMQSSLPITESSQHEYDCFLPSF*SSMLGP Trigger: AGGGCCCAACATGCTGCTCAAGAAAGATGGAAGAAA...ACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGCAATTTAATCAATCTTCGGATATGATTAGTTGTCAAATGTTGCTACACCCTCGGAGGCACTCGTaGATGTCTAAGACTGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRQFNQSSDMISCQMLLHPRRHS*MSKTDS Trigger: TGAGTCAGTCTTAGACATCAACGAGTGCCTCCGAGG...GTGTAGCAACATTTGACAACTAATCATATCCGAAGATTGATTAAATTGCCTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTGTCAAATATCCCTGAATATGCAGTTCTTCATGGGCTTCAAAATGAGCAATCCGAGATTCAGGGCTaGAAGGAAGATTCGAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TLSNIPEYAVLHGLQNEQSEIQG*KEDSSD Trigger: GTCACTCGAATCTTCCTTCAAGCCCTGAATCTCGGA...TTGCTCATTTTGAAGCCCATGAAGAACTGCATATTCAGGGATATTTGACAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | GTAATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTATTCTCTCCAGTACTaGTCGATCTCCACCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: VMQSSLPITESSQHEYDCYSLQY*SISTTP Trigger: TGGTGTGGTGGAGATCGACAAGTACTGGAGAGAATA...ACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | CACCATATGCTTTATACTTTGTCAAATATCCCTGAATATGCAGTTCTTCATGGGAGATCTATATTGGCGTaGCTGGGAGTGGGCACACAA | + |
|
Preference number: 5 (lower is better) Translates to: HHMLYTLSNIPEYAVLHGRSILA*LGVGTQ Trigger: TTGTGTGCCCACTCCCAGCAACGCCAATATAGATCT...CCCATGAAGAACTGCATATTCAGGGATATTTGACAAAGTATAAAGCATATGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | TGGTGTGTAATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATCTGTCGAACAATTCATaGACCATATCATCCACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WCVMQSSLPITESSQHEYLSNNS*TISSTL Trigger: CAACGTGGATGATATGGTCAATGAATTGTTCGACAG...ATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCATTACACACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | ATGCAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTTCGTGACTTGCAGTGACTaGGAAACCTGGGTCATAATA | + |
|
Preference number: 5 (lower is better) Translates to: MQSSLPITESSQHEYDCFVTCSD*ETWVII Trigger: TATTATGACCCAGGTTTCCAAGTCACTGCAAGTCAC...GAAACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTTCATAAGGTGGTCGGTAGTGTaGATGACTTCAATTCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSSLPITESSQHEYDCFIRWSVV*MTSIPR Trigger: TCTCGGAATTGAAGTCATCAACACTACCGACCACCT...TATGAAACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTTCATACAGTCCTTACTAAACTaGAGGTGGTCGGTAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QSSLPITESSQHEYDCFIQSLLN*RWSVVL Trigger: CAACACTACCGACCACCTCAAGTTTAGTAAGGACTG...TATGAAACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTTCATAACCAGCCATACAGCCTaGCATGACCACATTGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: QSSLPITESSQHEYDCFITSHTA*HDHIAI Trigger: TATTGCAATGTGGTCATGCAAGGCTGTATGGCTGGT...TATGAAACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGCAATTTAATCAATCTTCGGATATGATTAGTTGTCAAATGTTGCTACACATAAGCAGATCTATATaGGCGTTGCTGGGAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRQFNQSSDMISCQMLLHISRSI*ALLGVG Trigger: GCCCACTCCCAGCAACGCCAATATAGATCTGCTTAT...GTGTAGCAACATTTGACAACTAATCATATCCGAAGATTGATTAAATTGCCTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS TCA 90 bp | ATCAGTTCCCTTCTTCGGCTGGATAAGGTTTCTTCATGTTCGACATaGGCGACTTTTAATATCTTCTTGTCAATAAACAGATCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISSLLRLDKVSSCST*ATFNIFLSINRSSG Trigger: CCCTGAAGATCTGTTTATTGACAAGAAGATATTAAAAGTCGCTCATGTCGAACATGAAGAAACCTTATCCAGCCGAAGAAGGGAACTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTGTCAAATATCCCTGAATATGCAGTTCTTCATGGGCTTCAAAATGAGCAAAATTTCAAAGGCCTCTaGGAAAACCGCAGCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLSNIPEYAVLHGLQNEQNFKGL*ENRSIL Trigger: CAGAATGCTGCGGTTTTCCAAGAGGCCTTTGAAATT...TTGCTCATTTTGAAGCCCATGAAGAACTGCATATTCAGGGATATTTGACAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGTTCACTCCCAATAACTGAGAGCAGTCAGCATGAATATGATTGTTTCATAACCATATCATCCACGTaGATATCAGAACCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QSSLPITESSQHEYDCFITISST*ISEPKM Trigger: CATCTTGGGTTCTGATATCAACGTGGATGATATGGT...TATGAAACAATCATATTCATGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTGTCAAATATCCCTGAATATGCAGTTCTTCATGGGCTTCAAAATGAGCAATGGGTCATAATAAGCTaGGGGAAACTGCCAAATACT | + |
|
Preference number: 5 (lower is better) Translates to: TLSNIPEYAVLHGLQNEQWVIIS*GKLPNT Trigger: AGTATTTGGCAGTTTCCCCAAGCTTATTATGACCCA...TTGCTCATTTTGAAGCCCATGAAGAACTGCATATTCAGGGATATTTGACAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114857.2 |
||
| CDS TCA 72 bp | CCGGGCTGCAGTCTCTGGAAGAAAGAACGGACCTGGTaGCAGGTGGCGTCTGGAGGCGGCGGGGGCTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGCSLWKKERTW*QVASGGGGGCA Trigger: GGCGCAGCCCCCGCCGCCTCCAGACGCCACCTGTCACCAGGTCCGTTCTTTCTTCCAGAGACTGCAGCCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
||
| CDS TCA 72 bp | CTTTCAGGTCACGTCTTGCTCCTCGGAGGCACTCGTTaGTGTCTAAGACTGACTCAGGCAGGCCTGGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSGHVLLLGGTR*CLRLTQAGLGS Trigger: TGAACCCAGGCCTGCCTGAGTCAGTCTTAGACATCAACGAGTGCCTCCGAGGAGCAAGACGTGACCTGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
||
| CDS TCA 72 bp | GTGGGGACGGCATGTTCCCCACGCTGTGAGAGGTGGTaGTCTCGTTGTCCTTCTGATTTCCATGCTGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VGTACSPRCERW*SRCPSDFHAAC Trigger: ACAAGCAGCATGGAAATCAGAAGGACAACGAGATCACCACCTCTCACAGCGTGGGGAACATGCCGTCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
||
| CDS CCA 72 bp | GTTGCTGGGAGTGGGCACACAACTTGCCAATGGTGGTaGTCAGCTTGCCTCCGTTCTTCTGCACATACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VAGSGHTTCQWW*SACLRSSAHTG Trigger: TCCAGTATGTGCAGAAGAACGGAGGCAAGCTGACCACCACCATTGGCAAGTTGTGTGCCCACTCCCAGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
||
| CDS CAA 72 bp | ACTTTCAGGTCACGTCTTGCTCCTCGGAGGCACTCGTaGATGTCTAAGACTGACTCAGGCAGGCCTGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TFRSRLAPRRHS*MSKTDSGRPGF Trigger: GAACCCAGGCCTGCCTGAGTCAGTCTTAGACATCAACGAGTGCCTCCGAGGAGCAAGACGTGACCTGAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CAA 72 bp | CCTTGCCGCCTTCTGGCTGTATCTCTCCACAAGTTCTaGTCCGTTCCAGCACAGGGTATCATTTTCGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PCRLLAVSLHKF*SVPAQGIIFGH Trigger: GTGGCCGAAAATGATACCCTGTGCTGGAACGGACAAGAACTTGTGGAGAGATACAGCCAGAAGGCGGCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS CAA 90 bp | CTGCCAAATACTTTCAGGTCACGTCTTGCTCCTCGGAGGCACTCGTaGATGTCTAAGACTGACTCAGGCAGGCCTGGGTTCATCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: LPNTFRSRLAPRRHS*MSKTDSGRPGFIIW Trigger: CCAGATGATGAACCCAGGCCTGCCTGAGTCAGTCTTAGACATCAACGAGTGCCTCCGAGGAGCAAGACGTGACCTGAAAGTATTTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CAA 72 bp | GAGTGGGCACACAACTTGCCAATGGTGGTGGTCAGCTaGCCTCCGTTCTTCTGCACATACTGGATGGAATCA | + |
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Preference number: 6 (lower is better) Translates to: EWAHNLPMVVVS*PPFFCTYWMES Trigger: TGATTCCATCCAGTATGTGCAGAAGAACGGAGGCAAGCTGACCACCACCATTGGCAAGTTGTGTGCCCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CAA 72 bp | GACATGGTTCTCAGGAGCTGGTTAATGTGCTTCAGTTaGTCAATGATCTGGCTAACCACCGGCTCAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: DMVLRSWLMCFS*SMIWLTTGSGP Trigger: GGGCCCTGAGCCGGTGGTTAGCCAGATCATTGACAAACTGAAGCACATTAACCAGCTCCTGAGAACCATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS TCA 72 bp | AATCTGATCCTGGTACAGGGGTTTCTGGAACCCATTTaGGTCCGGGCTGCAGTCTCTGGAAGAAAGAACGGA | + |
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Preference number: 6 (lower is better) Translates to: NLILVQGFLEPI*VRAAVSGRKNG Trigger: TCCGTTCTTTCTTCCAGAGACTGCAGCCCGGACTCAAATGGGTTCCAGAAACCCCTGTACCAGGATCAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS TCA 72 bp | GCATGTTGGGCCCTTGGGGAGACATACTTGCAAATCTaGTCCTGGTACAGGGGTTTCTGGAACCCATTTGAG | + |
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Preference number: 6 (lower is better) Translates to: ACWALGETYLQI*SWYRGFWNPFE Trigger: CTCAAATGGGTTCCAGAAACCCCTGTACCAGGATCAGATTTGCAAGTATGTCTCCCCAAGGGCCCAACATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS TCA 72 bp | TCAGGGCCCTTCATTTTCAGCTCATGGAGGTTAAACTaGTTCTTCATCCCGTTCCTTGCCGCCTTCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SGPFIFSSWRLN*FFIPFLAAFWL Trigger: CAGCCAGAAGGCGGCAAGGAACGGGATGAAGAATCAGTTTAACCTCCATGAGCTGAAAATGAAGGGCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS CAA 72 bp | AAATCTGATCCTGGTACAGGGGTTTCTGGAACCCATTaGAGTCCGGGCTGCAGTCTCTGGAAGAAAGAACGG | + |
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Preference number: 6 (lower is better) Translates to: KSDPGTGVSGTH*SPGCSLWKKER Trigger: CCGTTCTTTCTTCCAGAGACTGCAGCCCGGACTCAAATGGGTTCCAGAAACCCCTGTACCAGGATCAGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CAA 72 bp | GTACTTGTCGATCTCCACCACACCAGCCATACAGCCTaGCATGACCACATTGCAATAACCACCGCAAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: VLVDLHHTSHTA*HDHIAITTARL Trigger: AAGCCTTGCGGTGGTTATTGCAATGTGGTCATGCAAGGCTGTATGGCTGGTGTGGTGGAGATCGACAAGTAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CCA 72 bp | AGGAGCTGGTTAATGTGCTTCAGTTTGTCAATGATCTaGCTAACCACCGGCTCAGGGCCCTTCATTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSWLMCFSLSMI*LTTGSGPFIFS Trigger: GCTGAAAATGAAGGGCCCTGAGCCGGTGGTTAGCCAGATCATTGACAAACTGAAGCACATTAACCAGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS CAA 72 bp | ATCCAGATCATAGGCCAGTTCTGCAAGGAAGCGCAGTaGATTCTTCACTTTCACCATCCCGTCACCAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: IQIIGQFCKEAQ*ILHFHHPVTRA Trigger: AGCTCTGGTGACGGGATGGTGAAAGTGAAGAATCAACTGCGCTTCCTTGCAGAACTGGCCTATGATCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069360.14 |
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| CDS CAA 90 bp | TTCTCTCCAGTACTTGTCGATCTCCACCACACCAGCCATACAGCCTaGCATGACCACATTGCAATAACCACCGCAAGGCTTAACCATCAT | + |
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Preference number: 6 (lower is better) Translates to: FSPVLVDLHHTSHTA*HDHIAITTARLNHH Trigger: ATGATGGTTAAGCCTTGCGGTGGTTATTGCAATGTGGTCATGCAAGGCTGTATGGCTGGTGTGGTGGAGATCGACAAGTACTGGAGAGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CAA 90 bp | CCATTCACGAGCTCTTCAAGAGACAGAATGTATTCTCTCCAGTACTaGTCGATCTCCACCACACCAGCCATACAGCCTTGCATGACCACA | + |
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Preference number: 6 (lower is better) Translates to: PFTSSSRDRMYSLQY*SISTTPAIQPCMTT Trigger: TGTGGTCATGCAAGGCTGTATGGCTGGTGTGGTGGAGATCGACAAGTACTGGAGAGAATACATTCTGTCTCTTGAAGAGCTCGTGAATGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS TCA 72 bp | CAAAAGCTTGTGGAGTCAGGCTGGGGTAGTTATTCTTaGACATGGCGTTGGTGTAGTTCTTGGCATGGCGAA | + |
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Preference number: 6 (lower is better) Translates to: QKLVESGWGSYS*TWRWCSSWHGE Trigger: TTCGCCATGCCAAGAACTACACCAACGCCATGTTCAAGAATAACTACCCCAGCCTGACTCCACAAGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CAA 72 bp | ATTCGGGTGAGCATACGGCCACAGTCCTTACTAAACTaGAGGTGGTCGGTAGTGTTGATGACTTCAATTCCG | + |
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Preference number: 6 (lower is better) Translates to: IRVSIRPQSLLN*RWSVVLMTSIP Trigger: CGGAATTGAAGTCATCAACACTACCGACCACCTCAAGTTTAGTAAGGACTGTGGCCGTATGCTCACCCGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CAA 72 bp | AGCTCTTCAAGAGACAGAATGTATTCTCTCCAGTACTaGTCGATCTCCACCACACCAGCCATACAGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SSSRDRMYSLQY*SISTTPAIQPC Trigger: GCAAGGCTGTATGGCTGGTGTGGTGGAGATCGACAAGTACTGGAGAGAATACATTCTGTCTCTTGAAGAGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CAA 90 bp | ATTCGAGTGACTTGCAGTGACTTGGAAACCTGGGTCATAATAAGCTaGGGGAAACTGCCAAATACTTTCAGGTCACGTCTTGCTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: IRVTCSDLETWVIIS*GKLPNTFRSRLAPR Trigger: CCGAGGAGCAAGACGTGACCTGAAAGTATTTGGCAGTTTCCCCAAGCTTATTATGACCCAGGTTTCCAAGTCACTGCAAGTCACTCGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CAA 90 bp | CCATGTTCAGCCGTGCTGTTAGTTGGTATTTTTCTTCCATCTTTCTaGAGCAGCATGTTGGGCCCTTGGGGAGACATACTTGCAAATCTG | + |
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Preference number: 6 (lower is better) Translates to: PCSAVLLVGIFLPSF*SSMLGPWGDILANL Trigger: CAGATTTGCAAGTATGTCTCCCCAAGGGCCCAACATGCTGCTCAAGAAAGATGGAAGAAAAATACCAACTAACAGCACGGCTGAACATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CAA 90 bp | GTCAATAAACAGATCTTCAGGGTAATAAGCAGATCTATATTGGCGTaGCTGGGAGTGGGCACACAACTTGCCAATGGTGGTGGTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: VNKQIFRVISRSILA*LGVGTQLANGGGQL Trigger: AAGCTGACCACCACCATTGGCAAGTTGTGTGCCCACTCCCAGCAACGCCAATATAGATCTGCTTATTACCCTGAAGATCTGTTTATTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CCA 72 bp | TTTCTTCCATCTTTCTTGAGCAGCATGTTGGGCCCTTaGGGAGACATACTTGCAAATCTGATCCTGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: FLPSFLSSMLGP*GDILANLILVQ Trigger: CTGTACCAGGATCAGATTTGCAAGTATGTCTCCCCAAGGGCCCAACATGCTGCTCAAGAAAGATGGAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CAA 90 bp | CTTCTTGTCAATAAACAGATCTTCAGGGTAATAAGCAGATCTATATaGGCGTTGCTGGGAGTGGGCACACAACTTGCCAATGGTGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LLVNKQIFRVISRSI*ALLGVGTQLANGGG Trigger: ACCACCACCATTGGCAAGTTGTGTGCCCACTCCCAGCAACGCCAATATAGATCTGCTTATTACCCTGAAGATCTGTTTATTGACAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS TCA 72 bp | ATTCAGGGCTTGAAGGAAGATTCGAGTGACTTGCAGTaGCTTGGAAACCTGGGTCATAATAAGCTTGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: IQGLKEDSSDLQ*LGNLGHNKLGE Trigger: TTCCCCAAGCTTATTATGACCCAGGTTTCCAAGTCACTGCAAGTCACTCGAATCTTCCTTCAAGCCCTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CAA 72 bp | TTTTCTTCCATCTTTCTTGAGCAGCATGTTGGGCCCTaGGGGAGACATACTTGCAAATCTGATCCTGGTACA | + |
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Preference number: 6 (lower is better) Translates to: FSSIFLEQHVGP*GRHTCKSDPGT Trigger: TGTACCAGGATCAGATTTGCAAGTATGTCTCCCCAAGGGCCCAACATGCTGCTCAAGAAAGATGGAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CAA 72 bp | ACTTGCAGTGACTTGGAAACCTGGGTCATAATAAGCTaGGGGAAACTGCCAAATACTTTCAGGTCACGTCTT | + |
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Preference number: 6 (lower is better) Translates to: TCSDLETWVIIS*GKLPNTFRSRL Trigger: AAGACGTGACCTGAAAGTATTTGGCAGTTTCCCCAAGCTTATTATGACCCAGGTTTCCAAGTCACTGCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS CCA 72 bp | TGGAGCAGTTGTTCCATGTTCAGCCGTGCTGTTAGTTaGTATTTTTCTTCCATCTTTCTTGAGCAGCATGTT | + |
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Preference number: 6 (lower is better) Translates to: WSSCSMFSRAVS*YFSSIFLEQHV Trigger: AACATGCTGCTCAAGAAAGATGGAAGAAAAATACCAACTAACAGCACGGCTGAACATGGAACAACTGCTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS TCA 72 bp | ACAATTTCAAAGGCCTCTTGGAAAACCGCAGCATTCTaGATAATTAAGAACTTGAGTTCCATACTCGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: TISKASWKTAAF*IIKNLSSILAD Trigger: GTCTGCGAGTATGGAACTCAAGTTCTTAATTATTCAGAATGCTGCGGTTTTCCAAGAGGCCTTTGAAATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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| CDS TCA 72 bp | CTTCTTCGGCTGGATAAGGTTTCTTCATGTTCGACATaGGCGACTTTTAATATCTTCTTGTCAATAAACAGA | + |
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Preference number: 6 (lower is better) Translates to: LLRLDKVSSCST*ATFNIFLSINR Trigger: TCTGTTTATTGACAAGAAGATATTAAAAGTCGCTCATGTCGAACATGAAGAAACCTTATCCAGCCGAAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069360.14 ENSMUST00000114857.2 |
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