Pregenerated sensors for GPC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029510Ensembl transcript IDs: ENSMUST00000014089.9, ENSMUST00000161827.8, ENSMUST00000161984.8
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCAAGACCGTCCCTTCGAGGAGGACGAGGTGGCCTTGGAGGCCTaGCTGGGGGAACCACAGGCACTGCCCCAGCTTTCCAGTCGTCTG | + |
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Preference number: 1 (lower is better) Translates to: LQDRPFEEDEVALEA*LGEPQALPQLSSRL Trigger: CAGACGACTGGAAAGCTGGGGCAGTGCCTGTGGTTCCCCCAGCCAGGCCTCCAAGGCCACCTCGTCCTCCTCGAAGGGACGGTCTTGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR CCA 90 bp | ACTTCCTCCTCTCACTCCAAGACCGTCCCTTCGAGGAGGACGAGGTaGCCTTGGAGGCCTGGCTGGGGGAACCACAGGCACTGCCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: TSSSHSKTVPSRRTR*PWRPGWGNHRHCPS Trigger: GCTGGGGCAGTGCCTGTGGTTCCCCCAGCCAGGCCTCCAAGGCCACCTCGTCCTCCTCGAAGGGACGGTCTTGGAGTGAGAGGAGGAAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR CCA 90 bp | TCCTCTCACTCCAAGACCGTCCCTTCGAGGAGGACGAGGTGGCCTTaGAGGCCTGGCTGGGGGAACCACAGGCACTGCCCCAGCTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: SSHSKTVPSRRTRWP*RPGWGNHRHCPSFP Trigger: TGGAAAGCTGGGGCAGTGCCTGTGGTTCCCCCAGCCAGGCCTCCAAGGCCACCTCGTCCTCCTCGAAGGGACGGTCTTGGAGTGAGAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR GCA 90 bp | CTCCAGTCCAGCAGGGTGCCGTCTCCTGTGAGAGATCTGCCGCCATaGGGGAGTCCCCACATACGGTTACAGGCAGTCCAGCCCAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: LQSSRVPSPVRDLPP*GSPHIRLQAVQPRS Trigger: GCTTCTGGGCTGGACTGCCTGTAACCGTATGTGGGGACTCCCGCATGGCGGCAGATCTCTCACAGGAGACGGCACCCTGCTGGACTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR TCA 90 bp | ATACCGGCCTCTCCCAACTCCAGTCCAGCAGGGTGCCGTCTCCTGTaGGAGATCTGCCGCCATGCGGGAGTCCCCACATACGGTTACAGG | + |
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Preference number: 1 (lower is better) Translates to: IPASPNSSPAGCRLL*EICRHAGVPTYGYR Trigger: CCTGTAACCGTATGTGGGGACTCCCGCATGGCGGCAGATCTCTCACAGGAGACGGCACCCTGCTGGACTGGAGTTGGGAGAGGCCGGTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR GCA 90 bp | GTCGGGACATCGGGACTCGAAGTATCCAACTCCGGGTTGTGGAGCTaGTCATTCAAGGAGCCCACGACCACAGGCGACATATACCGGCCT | + |
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Preference number: 1 (lower is better) Translates to: VGTSGLEVSNSGLWS*SFKEPTTTGDIYRP Trigger: AGGCCGGTATATGTCGCCTGTGGTCGTGGGCTCCTTGAATGAGCAGCTCCACAACCCGGAGTTGGATACTTCGAGTCCCGATGTCCCGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR GCA 90 bp | CAGATGACCCCAGATTCCTGCTTCGGCCCTGGTTGTATCTGGCACTaGCACTTCCTCCTCTCACTCCAAGACCGTCCCTTCGAGGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: QMTPDSCFGPGCIWH*HFLLSLQDRPFEED Trigger: GTCCTCCTCGAAGGGACGGTCTTGGAGTGAGAGGAGGAAGTGGCAGTGCCAGATACAACCAGGGCCGAAGCAGGAATCTGGGGTCATCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR CCA 90 bp | CTCCGCGTCGGGACATCGGGACTCGAAGTATCCAACTCCGGGTTGTaGAGCTGCTCATTCAAGGAGCCCACGACCACAGGCGACATATAC | + |
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Preference number: 1 (lower is better) Translates to: LRVGTSGLEVSNSGL*SCSFKEPTTTGDIY Trigger: GTATATGTCGCCTGTGGTCGTGGGCTCCTTGAATGAGCAGCTCCACAACCCGGAGTTGGATACTTCGAGTCCCGATGTCCCGACGCGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR CCA 90 bp | GAAACCCATCTACCTCCCACCCCATTAATTGGAAACTCCTGGATTTaGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: ETHLPPTPLIGNSWI*GPSHSPTKSLSALS Trigger: AGAGAGGGCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATTAATGGGGTGGGAGGTAGATGGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR CAA 90 bp | CGCCTCCGCGTCGGGACATCGGGACTCGAAGTATCCAACTCCGGGTaGTGGAGCTGCTCATTCAAGGAGCCCACGACCACAGGCGACATA | + |
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Preference number: 2 (lower is better) Translates to: RLRVGTSGLEVSNSG*WSCSFKEPTTTGDI Trigger: TATGTCGCCTGTGGTCGTGGGCTCCTTGAATGAGCAGCTCCACAACCCGGAGTTGGATACTTCGAGTCCCGATGTCCCGACGCGGAGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCCTGGCTGGGGGAACCACAGGCACTGCCCCAGCTTTCCAGTCGTCTGCACACAAAGTCCCTTTCTaGCCTCTCTGTAGCCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GGLAGGTTGTAPAFQSSAHKVPF*PLCSPL Trigger: AAGGGGGCTACAGAGAGGGCAGAAAGGGACTTTGTG...TGCAGACGACTGGAAAGCTGGGGCAGTGCCTGTGGTTCCCCCAGCCAGGCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR-3UTR TCA 90 bp | GATGCTAGGGCGCCCCTCCCTCGTTATCGAAGTACAAGCAGGGTCAGGGCTGAGGGGGTCCCACATTCCTaGAACACCTCCATCCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: DARAPLPRYRSTSRVRAEGVPHS*NTSILP Trigger: GGGAAGGATGGAGGTGTTTCAGGAATGTGGGACCCC...CTCAGCCCTGACCCTGCTTGTACTTCGATAACGAGGGAGGGGCGCCCTAGCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCCAGTCGTCTGCATACTaGTGTCCCCCTCCAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GNSWIWGPSHSPTKSLSAQSSAY*CPPPEP Trigger: TGGCTCTGGAGGGGGACAGCAGTATGCAGACGACTG...GGCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGTCCAGCCCAGAAGCCCCGTACTCGGCTAAGTCTCTCCCGGAGCTCCCATTAATTGGAAACTCCTaGATTTGGGGCCCCAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: RQSSPEAPYSAKSLPELPLIGNS*IWGPSH Trigger: ATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATTAA...TGGGAGCTCCGGGAGAGACTTAGCCGAGTACGGGGCTTCTGGGCTGGACTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTGTCCCCCTCCAGAGCCACTGGCATCTTCATCCGCATCATGCATGTCAATCCGGGTTGTGGAGCTaGTCATTCAAGGAGCCCACG | + |
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Preference number: 2 (lower is better) Translates to: TAVPLQSHWHLHPHHACQSGLWS*SFKEPT Trigger: CGTGGGCTCCTTGAATGAGCAGCTCCACAACCCGGA...TTGACATGCATGATGCGGATGAAGATGCCAGTGGCTCTGGAGGGGGACAGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGGAGGAGGAGGACAAGTGGGGTATGGAGGCCAACAGATGACCCCAGATTCCAGCTTTCCAGTCGTCTaGATACTGCTGTCCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: EGGGGQVGYGGQQMTPDSSFPVV*ILLSPS Trigger: GGAGGGGGACAGCAGTATGCAGACGACTGGAAAGCT...GGAATCTGGGGTCATCTGTTGGCCTCCATACCCCACTTGTCCTCCTCCTCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR CAA 90 bp | CATGCCTGGCTGAGGGAGGTGGAAGAAAAAGAGCCACTAAGCCTTTaGATGCTAGGGCGCCCCTCCCTCGTTATCGAAGTACAAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: HAWLREVEEKEPLSL*MLGRPSLVIEVQAG Trigger: CCCTGCTTGTACTTCGATAACGAGGGAGGGGCGCCCTAGCATCAAAAGGCTTAGTGGCTCTTTTTCTTCCACCTCCCTCAGCCAGGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR-3UTR TCA 90 bp | AATTGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCCTCCTCATGCCTGGCTaGGGGAGGTGGAAGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: NWKLLDLGPQPFTHKVPFLLMPG*GRWKKK Trigger: CTTTTTCTTCCACCTCCCTCAGCCAGGCATGAGGAG...GAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR-3UTR CCA 90 bp | AATTGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCACTCCTCCTCATGCCTaGCTGAGGGAGGTGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: NWKLLDLGPQPFTHKVPFTPPHA*LREVEE Trigger: TTCTTCCACCTCCCTCAGCCAGGCATGAGGAGGAGT...GAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGCAACAAAACTCAGGTTCTACCCTCCTTCCTGTTCTACTGTCAGCACCTCTCCTCATGCCTGGCTaGGGGAGGTGGAAGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: KRQQNSGSTLLPVLLSAPLLMPG*GRWKKK Trigger: CTTTTTCTTCCACCTCCCTCAGCCAGGCATGAGGAG...AGGTGCTGACAGTAGAACAGGAAGGAGGGTAGAACCTGAGTTTTGTTGCCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCAACAAAACTCAGGTTCTACCCTCCTTCCTGTTCTACTGTCAGCACCTAGCATGACCCCAGATTCCTaGTTCGGCCCTGGTTGTATC | + |
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Preference number: 2 (lower is better) Translates to: RQQNSGSTLLPVLLSAPSMTPDS*FGPGCI Trigger: GATACAACCAGGGCCGAAGCAGGAATCTGGGGTCAT...GCTAGGTGCTGACAGTAGAACAGGAAGGAGGGTAGAACCTGAGTTTTGTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCCACTAAGCCTTTTGATGCTAGGGCGCCCCTCCCTCGTTATCGAAGTACAAAACTCTCAATCCTCCTaGCTCAGCATCCCAAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: EPLSLLMLGRPSLVIEVQNSQSS*LSIPKN Trigger: ATTCTTTGGGATGCTGAGGCAGGAGGATTGAGAGTT...TTGTACTTCGATAACGAGGGAGGGGCGCCCTAGCATCAAAAGGCTTAGTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR-3UTR CCA 90 bp | TTATTAGTCCCTAACTCTCAATCCTCCTGCCTCAGCATCCCAAAGAATAATGGGACTCCTCCTCATGCCTaGCTGAGGGAGGTGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LLVPNSQSSCLSIPKNNGTPPHA*LREVEE Trigger: TTCTTCCACCTCCCTCAGCCAGGCATGAGGAGGAGT...CCCATTATTCTTTGGGATGCTGAGGCAGGAGGATTGAGAGTTAGGGACTAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR-3UTR CCA 90 bp | TTAAAAGAGGCAACAAAACTCAGGTTCTACCCTCCTTCCTGTTCTACTGTCAGCACTCCTCCTCATGCCTaGCTGAGGGAGGTGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LKEATKLRFYPPSCSTVSTPPHA*LREVEE Trigger: TTCTTCCACCTCCCTCAGCCAGGCATGAGGAGGAGT...GCTGACAGTAGAACAGGAAGGAGGGTAGAACCTGAGTTTTGTTGCCTCTTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR-3UTR TCA 90 bp | ACACTGAAATATGAAGTGGAAGTTTGTGATGGATGTGGATGGCAAAGGTCGCTACTCCTCATGCCTGGCTaGGGGAGGTGGAAGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: TLKYEVEVCDGCGWQRSLLLMPG*GRWKKK Trigger: CTTTTTCTTCCACCTCCCTCAGCCAGGCATGAGGAG...TAGCGACCTTTGCCATCCACATCCATCACAAACTTCCACTTCATATTTCAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTAGTCCCTAACTCTCAATCCTCCTGCCTCAGCATCCCAAAGAATAATGGGCACAAAGTCCCTTTCTaGCCTCTCTGTAGCCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LLVPNSQSSCLSIPKNNGHKVPF*PLCSPL Trigger: AAGGGGGCTACAGAGAGGGCAGAAAGGGACTTTGTG...CCCATTATTCTTTGGGATGCTGAGGCAGGAGGATTGAGAGTTAGGGACTAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR-3UTR CCA 90 bp | TTATTAGTCCCTAACTCTCAATCCTCCTGCCTCAGCATCCCAAAGAATAATGGGTTAATTGGAAACTCCTaGATTTGGGGCCCCAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: LLVPNSQSSCLSIPKNNGLIGNS*IWGPSH Trigger: ATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATTAA...CCCATTATTCTTTGGGATGCTGAGGCAGGAGGATTGAGAGTTAGGGACTAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCAAAGATTTAAAAGAGCTGAACCATCCTTCCTAAATAAATATCCCCAGTTCCACAAAGTCCCTTTCTaGCCTCTCTGTAGCCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: AQRFKRAEPSFLNKYPQFHKVPF*PLCSPL Trigger: AAGGGGGCTACAGAGAGGGCAGAAAGGGACTTTGTG...GAACTGGGGATATTTATTTAGGAAGGATGGTTCAGCTCTTTTAAATCTTTGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR CCA 72 bp | CCTTCGAGGAGGACGAGGTGGCCTTGGAGGCCTGGCTaGGGGAACCACAGGCACTGCCCCAGCTTTCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: PSRRTRWPWRPG*GNHRHCPSFPV Trigger: GACTGGAAAGCTGGGGCAGTGCCTGTGGTTCCCCCAGCCAGGCCTCCAAGGCCACCTCGTCCTCCTCGAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR CCA 72 bp | TCTCACTCCAAGACCGTCCCTTCGAGGAGGACGAGGTaGCCTTGGAGGCCTGGCTGGGGGAACCACAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: SHSKTVPSRRTR*PWRPGWGNHRH Trigger: GTGCCTGTGGTTCCCCCAGCCAGGCCTCCAAGGCCACCTCGTCCTCCTCGAAGGGACGGTCTTGGAGTGAGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR GCA 72 bp | TGGCCTTGGAGGCCTGGCTGGGGGAACCACAGGCACTaGCCCAGCTTTCCAGTCGTCTGCATACTGCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: WPWRPGWGNHRH*PSFPVVCILLS Trigger: GGACAGCAGTATGCAGACGACTGGAAAGCTGGGGCAGTGCCTGTGGTTCCCCCAGCCAGGCCTCCAAGGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR TCA 72 bp | TCTCCCAACTCCAGTCCAGCAGGGTGCCGTCTCCTGTaGGAGATCTGCCGCCATGCGGGAGTCCCCACATAC | + |
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Preference number: 3 (lower is better) Translates to: SPNSSPAGCRLL*EICRHAGVPTY Trigger: GTATGTGGGGACTCCCGCATGGCGGCAGATCTCTCACAGGAGACGGCACCCTGCTGGACTGGAGTTGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR GCA 72 bp | GGGAACCACAGGCACTGCCCCAGCTTTCCAGTCGTCTaGATACTGCTGTCCCCCTCCAGAGCCACTGGCATC | + |
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Preference number: 3 (lower is better) Translates to: GNHRHCPSFPVV*ILLSPSRATGI Trigger: GATGCCAGTGGCTCTGGAGGGGGACAGCAGTATGCAGACGACTGGAAAGCTGGGGCAGTGCCTGTGGTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR GCA 72 bp | ACAGGCACTGCCCCAGCTTTCCAGTCGTCTGCATACTaGTGTCCCCCTCCAGAGCCACTGGCATCTTCATCC | + |
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Preference number: 3 (lower is better) Translates to: TGTAPAFQSSAY*CPPPEPLASSS Trigger: GGATGAAGATGCCAGTGGCTCTGGAGGGGGACAGCAGTATGCAGACGACTGGAAAGCTGGGGCAGTGCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR-3UTR CAA 90 bp | TGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCGAGCCACTAAGCCTTTaGATGCTAGGGCGCCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: WKLLDLGPQPFTHKVPFCEPLSL*MLGRPS Trigger: GGAGGGGCGCCCTAGCATCAAAAGGCTTAGTGGCTC...GCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR GCA 72 bp | CCAGATTCCTGCTTCGGCCCTGGTTGTATCTGGCACTaGCACTTCCTCCTCTCACTCCAAGACCGTCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: PDSCFGPGCIWH*HFLLSLQDRPF Trigger: GAAGGGACGGTCTTGGAGTGAGAGGAGGAAGTGGCAGTGCCAGATACAACCAGGGCCGAAGCAGGAATCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR TCA 72 bp | GAGGAGGAGGACAAGTGGGGTATGGAGGCCAACAGATaGCCCCAGATTCCTGCTTCGGCCCTGGTTGTATCT | + |
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Preference number: 3 (lower is better) Translates to: EEEDKWGMEANR*PQIPASALVVS Trigger: AGATACAACCAGGGCCGAAGCAGGAATCTGGGGTCATCTGTTGGCCTCCATACCCCACTTGTCCTCCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR GCA 72 bp | TCGGGACTCGAAGTATCCAACTCCGGGTTGTGGAGCTaGTCATTCAAGGAGCCCACGACCACAGGCGACATA | + |
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Preference number: 3 (lower is better) Translates to: SGLEVSNSGLWS*SFKEPTTTGDI Trigger: TATGTCGCCTGTGGTCGTGGGCTCCTTGAATGAGCAGCTCCACAACCCGGAGTTGGATACTTCGAGTCCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTACCCCCATGCCAATAGTACCATTCCTCCCCACTTTCAAGTTCCTTCAACCGAGCCACTAAGCCTTTaGATGCTAGGGCGCCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: RYPHANSTIPPHFQVPSTEPLSL*MLGRPS Trigger: GGAGGGGCGCCCTAGCATCAAAAGGCTTAGTGGCTC...GGTTGAAGGAACTTGAAAGTGGGGAGGAATGGTACTATTGGCATGGGGGTACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGAGGCAACAAAACTCAGGTTCTACCCTCCTTCCTGTTCTACTGTCAGCACCGAGCCACTAAGCCTTTaGATGCTAGGGCGCCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: KEATKLRFYPPSCSTVSTEPLSL*MLGRPS Trigger: GGAGGGGCGCCCTAGCATCAAAAGGCTTAGTGGCTC...GGTGCTGACAGTAGAACAGGAAGGAGGGTAGAACCTGAGTTTTGTTGCCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR CCA 72 bp | CTACCTCCCACCCCATTAATTGGAAACTCCTGGATTTaGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: LPPTPLIGNSWI*GPSHSPTKSLS Trigger: AGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATTAATGGGGTGGGAGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR-3UTR CAA 90 bp | ATGTGTCCATTTTCAATACCAGGTACCCCCATGCCAATAGTACCATTCCTCCCCTGGAAACTCCTGGATTaGGGGCCCCAGCCATTCACC | + |
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Preference number: 3 (lower is better) Translates to: MCPFSIPGTPMPIVPFLPWKLLD*GPQPFT Trigger: GGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCA...GGGGAGGAATGGTACTATTGGCATGGGGGTACCTGGTATTGAAAATGGACACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR-3UTR CAA 90 bp | GTTCTACCCTCCTTCCTGTTCTACTGTCAGCACCTAGCTTTATTAGTCCCTAACTGGAAACTCCTGGATTaGGGGCCCCAGCCATTCACC | + |
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Preference number: 3 (lower is better) Translates to: VLPSFLFYCQHLALLVPNWKLLD*GPQPFT Trigger: GGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCA...GTTAGGGACTAATAAAGCTAGGTGCTGACAGTAGAACAGGAAGGAGGGTAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| 3UTR TCA 72 bp | CTCAGCATCCCAAAGAATAATGGGTTTACAGGCAAGTaGCATCACTCTCAGCTAGTTTATGTGTCCATTTTC | + |
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Preference number: 3 (lower is better) Translates to: LSIPKNNGFTGK*HHSQLVYVSIF Trigger: GAAAATGGACACATAAACTAGCTGAGAGTGATGTCACTTGCCTGTAAACCCATTATTCTTTGGGATGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| CDS-3UTR TCA 90 bp | AGGCAGTCCAGCCCAGAAGCCCCGTACTCGGCTAAGTCTCTCCCGGAGCTCCCAAGCCATGGGCTACATTaGGGCAGAAGCCCCGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RQSSPEAPYSAKSLPELPSHGLH*GRSPGR Trigger: CCTGCCGGGGCTTCTGCCTCAATGTAGCCCATGGCT...TGGGAGCTCCGGGAGAGACTTAGCCGAGTACGGGGCTTCTGGGCTGGACTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
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| CDS-3UTR TCA 90 bp | CCGCCTCCGCGTCGGGACATCGGGACTCGAAGTATCCAACTCCGGGTTGTGGAGCCAGTCCCCTACTGCTaGGGCAGCCATGGGCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: PPPRRDIGTRSIQLRVVEPVPYC*GSHGLH Trigger: ATGTAGCCCATGGCTGCCTCAGCAGTAGGGGACTGG...CTCCACAACCCGGAGTTGGATACTTCGAGTCCCGATGTCCCGACGCGGAGGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | TACCGGCCTCTCCCAACTCCAGTCCAGCAGGGTGCCGTCTCCTGTGAGAGATCTCGGGCCCCCAGCACCTaGCGAGTCTCTGCACAACTC | + |
|
Preference number: 4 (lower is better) Translates to: YRPLPTPVQQGAVSCERSRAPST*RVSAQL Trigger: GAGTTGTGCAGAGACTCGGCAGGTGCTGGGGGCCCG...AGATCTCTCACAGGAGACGGCACCCTGCTGGACTGGAGTTGGGAGAGGCCGGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
||
| CDS-3UTR TCA 90 bp | CGACCACAGGCGACATATACCGGCCTCTCCCAACTCCAGTCCAGCAGGGTGCCGGGTGCTCACCTGAGATaGGGGAGGGAGGGATTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPQATYTGLSQLQSSRVPGAHLR*GREGLG Trigger: ACCTAATCCCTCCCTCCCTCATCTCAGGTGAGCACC...CGGCACCCTGCTGGACTGGAGTTGGGAGAGGCCGGTATATGTCGCCTGTGGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | CCGCCTCCGCGTCGGGACATCGGGACTCGAAGTATCCAACTCCGGGTTGTGGAGGCATCAGGGCCTGTCTaGAGCCTTCCAACACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PPPRRDIGTRSIQLRVVEASGPV*SLPTLV Trigger: TACCAGTGTTGGAAGGCTGCAGACAGGCCCTGATGC...CTCCACAACCCGGAGTTGGATACTTCGAGTCCCGATGTCCCGACGCGGAGGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGTCCAGCCCAGAAGCCCCGTACTCGGCTAAGTCTCTCCCGGAGCTCCCAAGGGAAACTGTATTGTaGGTGCAGCAAAGGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQSSPEAPYSAKSLPELPRETVL*VQQREG Trigger: GCCTTCCCTTTGCTGCACCCACAATACAGTTTCCCT...TGGGAGCTCCGGGAGAGACTTAGCCGAGTACGGGGCTTCTGGGCTGGACTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | GAAACCCATCTACCTCCCACCCCATTAATTGGAAACTCCTGGATTTGGGGCCCCCCTTGGAGGCCTGGCTaGGGGAACCACAGGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ETHLPPTPLIGNSWIWGPPWRPG*GNHRHC Trigger: GCAGTGCCTGTGGTTCCCCCAGCCAGGCCTCCAAGG...GGGGCCCCAAATCCAGGAGTTTCCAATTAATGGGGTGGGAGGTAGATGGGTTTC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR CCA 90 bp | GCCAATAGTACCATTCCTCCCCACTTTCAAGTTCCTTCAACCCCGTGTCCCACCTCGAGGAGGACGAGGTaGCCTTGGAGGCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ANSTIPPHFQVPSTPCPTSRRTR*PWRPGW Trigger: CCAGCCAGGCCTCCAAGGCCACCTCGTCCTCCTCGA...GGTGGGACACGGGGTTGAAGGAACTTGAAAGTGGGGAGGAATGGTACTATTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR TCA 90 bp | AATAGTACCATTCCTCCCCACTTTCAAGTTCCTTCAACCCCGTGTCCCACCCCCAGCCATGGGCTACATTaGGGCAGAAGCCCCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSTIPPHFQVPSTPCPTPSHGLH*GRSPGR Trigger: CCTGCCGGGGCTTCTGCCTCAATGTAGCCCATGGCT...GGGGGTGGGACACGGGGTTGAAGGAACTTGAAAGTGGGGAGGAATGGTACTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR TCA 90 bp | GGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCGGGGTCCCACATTCCTaGAACACCTTCGCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: GNSWIWGPSHSPTKSLSAGVPHS*NTFADT Trigger: GGTGTCAGCGAAGGTGTTTCAGGAATGTGGGACCCC...GGCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR CCA 90 bp | CCATTAATTGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCGTGGCCTTGGAGGCCTaGCTGGGGGAACCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLIGNSWIWGPSHSPTKSVALEA*LGEPQA Trigger: TGCCTGTGGTTCCCCCAGCCAGGCCTCCAAGGCCAC...GGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATTAATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR TCA 90 bp | GGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCTTGAAGGTGCTCACCTaGGATGAGGGAGGGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GNSWIWGPSHSPTKSLSALKVLT*DEGGRD Trigger: ATCCCTCCCTCCCTCATCTCAGGTGAGCACCTTCAA...GGCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR TCA 90 bp | GGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCATGGAGGCCAACAGATaGCCCCAGATTCCTGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GNSWIWGPSHSPTKSLSAMEANR*PQIPAS Trigger: CGAAGCAGGAATCTGGGGTCATCTGTTGGCCTCCAT...GGCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR GCA 90 bp | GGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCTCTCTCCAGGAGCTGTaGCCAGAAATCCGCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GNSWIWGPSHSPTKSLSASLQEL*PEIRQG Trigger: ACCTTGGCGGATTTCTGGGCACAGCTCCTGGAGAGA...GGCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCCACGACCACAGGCGACATATACCGGCCTCTCCCAACTCCAGTCCAGCAGAAACTGTATTGTGGGTaGAGCAAAGGGAAGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EPTTTGDIYRPLPTPVQQKLYCG*SKGKAL Trigger: GAGAGCCTTCCCTTTGCTGCACCCACAATACAGTTT...CTGCTGGACTGGAGTTGGGAGAGGCCGGTATATGTCGCCTGTGGTCGTGGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | GATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCCTCTCTGTAGCGAGTCTCCGAAGGGCTaGAGAGAGCCATCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DLGPQPFTHKVPFCPLCSESPKG*REPSAV Trigger: AACTGCTGATGGCTCTCTGCAGCCCTTCGGAGACTC...GCTACAGAGAGGGCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | CGACCACAGGCGACATATACCGGCCTCTCCCAACTCCAGTCCAGCAGGGTGCCGCACTGGTACCTTAAGTaGTTCGCTGACCACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPQATYTGLSQLQSSRVPHWYLK*FADHIS Trigger: AGAAATGTGGTCAGCGAAGCACTTAAGGTACCAGTG...CGGCACCCTGCTGGACTGGAGTTGGGAGAGGCCGGTATATGTCGCCTGTGGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCCTCTCTGATGACCCCAGATTCCTaGTTCGGCCCTGGTTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: PGFGAPAIHPQSPFLPSLMTPDS*FGPGCI Trigger: GATACAACCAGGGCCGAAGCAGGAATCTGGGGTCAT...CAGAGAGGGCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR CCA 90 bp | GAAACCCATCTACCTCCCACCCCATTAATTGGAAACTCCTGGATTTGGGGCCCCCCCCTCCAGAGCCACTaGCATCTTCATCCAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETHLPPTPLIGNSWIWGPPLQSH*HLHPAQ Trigger: CTGCGCTGGATGAAGATGCCAGTGGCTCTGGAGGGG...GGGGCCCCAAATCCAGGAGTTTCCAATTAATGGGGTGGGAGGTAGATGGGTTTC 57% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000014089.9 |
||
| CDS-3UTR CCA 90 bp | ATTAATTGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTCCTTGGAGGCCTGGCTaGGGGAACCACAGGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: INWKLLDLGPQPFTHKVPPWRPG*GNHRHC Trigger: GCAGTGCCTGTGGTTCCCCCAGCCAGGCCTCCAAGG...AGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
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| CDS-3UTR CCA 90 bp | AGGCAACAAAACTCAGGTTCTACCCTCCTTCCTGTTCTACTGTCAGCACCTAGCAGGACGAGGTGGCCTTaGAGGCCTGGCTGGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQQNSGSTLLPVLLSAPSRTRWP*RPGWGN Trigger: GTTCCCCCAGCCAGGCCTCCAAGGCCACCTCGTCCT...GCTAGGTGCTGACAGTAGAACAGGAAGGAGGGTAGAACCTGAGTTTTGTTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR TCA 90 bp | GAAACCCATCTACCTCCCACCCCATTAATTGGAAACTCCTGGATTTGGGGCCCCCGGGCAGCCAGTGTGTaGATCAGGAAAGAGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ETHLPPTPLIGNSWIWGPRAASV*IRKEPL Trigger: CAGTGGCTCTTTCCTGATTCACACACTGGCTGCCCG...GGGGCCCCAAATCCAGGAGTTTCCAATTAATGGGGTGGGAGGTAGATGGGTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGTCCATTTTCAATACCAGGTACCCCCATGCCAATAGTACCATTCCTCCCCCGGGCCCCCAGCACCTaGCGAGTCTCTGCACAACTC | + |
|
Preference number: 4 (lower is better) Translates to: MCPFSIPGTPMPIVPFLPRAPST*RVSAQL Trigger: GAGTTGTGCAGAGACTCGGCAGGTGCTGGGGGCCCG...GGGGAGGAATGGTACTATTGGCATGGGGGTACCTGGTATTGAAAATGGACACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCTGCTGAGGCAGCCATaGGCTACATTGAGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WKLLDLGPQPFTHKVPFCLLRQP*ATLRQK Trigger: CTTCTGCCTCAATGTAGCCCATGGCTGCCTCAGCAG...GCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCAGCATCCCAAAGAATAATGGGTTTACAGGCAAGTGACATCACTCTCGTGGCCTTGGAGGCCTaGCTGGGGGAACCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PASASQRIMGLQASDITLVALEA*LGEPQA Trigger: TGCCTGTGGTTCCCCCAGCCAGGCCTCCAAGGCCAC...GAGAGTGATGTCACTTGCCTGTAAACCCATTATTCTTTGGGATGCTGAGGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCCTCTCTGAAACTGTATTGTGGGTaGAGCAAAGGGAAGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGFGAPAIHPQSPFLPSLKLYCG*SKGKAL Trigger: GAGAGCCTTCCCTTTGCTGCACCCACAATACAGTTT...CAGAGAGGGCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| CDS-3UTR CCA 90 bp | TGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCAGACCCGGACACAGATaGAGCAGCAAAAGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WKLLDLGPQPFTHKVPFCRPGHR*SSKSRR Trigger: TCTCCTGCTTTTGCTGCTCCATCTGTGTCCGGGTCT...GCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| CDS-3UTR CCA 90 bp | GAAGTATCCAACTCCGGGTTGTGGAGCTGCTCATTCAAGGAGCCCACGACCACAAGACCCGGACACAGATaGAGCAGCAAAAGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVSNSGLWSCSFKEPTTTRPGHR*SSKSRR Trigger: TCTCCTGCTTTTGCTGCTCCATCTGTGTCCGGGTCT...TGTGGTCGTGGGCTCCTTGAATGAGCAGCTCCACAACCCGGAGTTGGATACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | GATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCCTCTCTGTAGCAGGGAAACTGTATTGTaGGTGCAGCAAAGGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLGPQPFTHKVPFCPLCSRETVL*VQQREG Trigger: GCCTTCCCTTTGCTGCACCCACAATACAGTTTCCCT...GCTACAGAGAGGGCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCACTAAGCCTTTTGATGCTAGGGCGCCCCTCCCTCGTTATCGAAGTACAACTGCTGAGGCAGCCATaGGCTACATTGAGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EPLSLLMLGRPSLVIEVQLLRQP*ATLRQK Trigger: CTTCTGCCTCAATGTAGCCCATGGCTGCCTCAGCAG...TTGTACTTCGATAACGAGGGAGGGGCGCCCTAGCATCAAAAGGCTTAGTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | GGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCAAGGAAAAGGGTCCTTaGAGTTTCTCAGCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GNSWIWGPSHSPTKSLSAKEKGP*SFSASS Trigger: GCTGCTGGCTGAGAAACTCCAAGGACCCTTTTCCTT...GGCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTACCCTCCTTCCTGTTCTACTGTCAGCACCTAGCTTTATTAGTCCCTAACAGGACGAGGTGGCCTTaGAGGCCTGGCTGGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLPSFLFYCQHLALLVPNRTRWP*RPGWGN Trigger: GTTCCCCCAGCCAGGCCTCCAAGGCCACCTCGTCCT...GTTAGGGACTAATAAAGCTAGGTGCTGACAGTAGAACAGGAAGGAGGGTAGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR TCA 90 bp | AGGTACCCCCATGCCAATAGTACCATTCCTCCCCACTTTCAAGTTCCTTCAACCGGTGCTCACCTGAGATaGGGGAGGGAGGGATTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RYPHANSTIPPHFQVPSTGAHLR*GREGLG Trigger: ACCTAATCCCTCCCTCCCTCATCTCAGGTGAGCACC...GGTTGAAGGAACTTGAAAGTGGGGAGGAATGGTACTATTGGCATGGGGGTACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR TCA 90 bp | CCATTAATTGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCTTGAAGGTGCTCACCTaGGATGAGGGAGGGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLIGNSWIWGPSHSPTKSLKVLT*DEGGRD Trigger: ATCCCTCCCTCCCTCATCTCAGGTGAGCACCTTCAA...GGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATTAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR TCA 90 bp | ATTAATTGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTGGGGTCCCACATTCCTaGAACACCTTCGCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: INWKLLDLGPQPFTHKVPGVPHS*NTFADT Trigger: GGTGTCAGCGAAGGTGTTTCAGGAATGTGGGACCCC...AGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR GCA 90 bp | CCATTAATTGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCGAGTCTCCGAAGGGCTaGAGAGAGCCATCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLIGNSWIWGPSHSPTKSESPKG*REPSAV Trigger: AACTGCTGATGGCTCTCTGCAGCCCTTCGGAGACTC...GGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATTAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCCTCTCTGCACTGGTACCTTAAGTaGTTCGCTGACCACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGFGAPAIHPQSPFLPSLHWYLK*FADHIS Trigger: AGAAATGTGGTCAGCGAAGCACTTAAGGTACCAGTG...CAGAGAGGGCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | ATTAATTGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTCAGTCGTCTGCATACTaGTGTCCCCCTCCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: INWKLLDLGPQPFTHKVPQSSAY*CPPPEP Trigger: TGGCTCTGGAGGGGGACAGCAGTATGCAGACGACTG...AGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR GCA 90 bp | AATTGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCAGCTTTCCAGTCGTCTaGATACTGCTGTCCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NWKLLDLGPQPFTHKVPFSFPVV*ILLSPS Trigger: GGAGGGGGACAGCAGTATGCAGACGACTGGAAAGCT...GAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR GCA 90 bp | AATAGTACCATTCCTCCCCACTTTCAAGTTCCTTCAACCCCGTGTCCCACCCCCGGTTGTATCTGGCACTaGCACTTCCTCCTCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: NSTIPPHFQVPSTPCPTPGCIWH*HFLLSL Trigger: GAGTGAGAGGAGGAAGTGGCAGTGCCAGATACAACC...GGGGGTGGGACACGGGGTTGAAGGAACTTGAAAGTGGGGAGGAATGGTACTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR CCA 90 bp | CCATTAATTGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTGCTGAGGCAGCCATaGGCTACATTGAGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLIGNSWIWGPSHSPTKSLLRQP*ATLRQK Trigger: CTTCTGCCTCAATGTAGCCCATGGCTGCCTCAGCAG...GGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATTAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGTCCATTTTCAATACCAGGTACCCCCATGCCAATAGTACCATTCCTCCCCGGTGCTCACCTGAGATaGGGGAGGGAGGGATTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MCPFSIPGTPMPIVPFLPGAHLR*GREGLG Trigger: ACCTAATCCCTCCCTCCCTCATCTCAGGTGAGCACC...GGGGAGGAATGGTACTATTGGCATGGGGGTACCTGGTATTGAAAATGGACACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGTCCATTTTCAATACCAGGTACCCCCATGCCAATAGTACCATTCCTCCCCCGGGCAGCCAGTGTGTaGATCAGGAAAGAGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: MCPFSIPGTPMPIVPFLPRAASV*IRKEPL Trigger: CAGTGGCTCTTTCCTGATTCACACACTGGCTGCCCG...GGGGAGGAATGGTACTATTGGCATGGGGGTACCTGGTATTGAAAATGGACACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | AGGTACCCCCATGCCAATAGTACCATTCCTCCCCACTTTCAAGTTCCTTCAACCGCATCAGGGCCTGTCTaGAGCCTTCCAACACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RYPHANSTIPPHFQVPSTASGPV*SLPTLV Trigger: TACCAGTGTTGGAAGGCTGCAGACAGGCCCTGATGC...GGTTGAAGGAACTTGAAAGTGGGGAGGAATGGTACTATTGGCATGGGGGTACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAACAAAACTCAGGTTCTACCCTCCTTCCTGTTCTACTGTCAGCACCTAGCAGCTTTCCAGTCGTCTaGATACTGCTGTCCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQQNSGSTLLPVLLSAPSSFPVV*ILLSPS Trigger: GGAGGGGGACAGCAGTATGCAGACGACTGGAAAGCT...GCTAGGTGCTGACAGTAGAACAGGAAGGAGGGTAGAACCTGAGTTTTGTTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR CCA 90 bp | GCCAATAGTACCATTCCTCCCCACTTTCAAGTTCCTTCAACCCCGTGTCCCACCAAGGAAAAGGGTCCTTaGAGTTTCTCAGCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ANSTIPPHFQVPSTPCPTKEKGP*SFSASS Trigger: GCTGCTGGCTGAGAAACTCCAAGGACCCTTTTCCTT...GGTGGGACACGGGGTTGAAGGAACTTGAAAGTGGGGAGGAATGGTACTATTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAGAGGCAACAAAACTCAGGTTCTACCCTCCTTCCTGTTCTACTGTCAGTCGAGGAGGACGAGGTaGCCTTGGAGGCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FKRGNKTQVLPSFLFYCQSRRTR*PWRPGW Trigger: CCAGCCAGGCCTCCAAGGCCACCTCGTCCTCCTCGA...CTGACAGTAGAACAGGAAGGAGGGTAGAACCTGAGTTTTGTTGCCTCTTTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR TCA 90 bp | TTTATGTGTCCATTTTCAATACCAGGTACCCCCATGCCAATAGTACCATTCCTCAGCCATGGGCTACATTaGGGCAGAAGCCCCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FMCPFSIPGTPMPIVPFLSHGLH*GRSPGR Trigger: CCTGCCGGGGCTTCTGCCTCAATGTAGCCCATGGCT...GAGGAATGGTACTATTGGCATGGGGGTACCTGGTATTGAAAATGGACACATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTACCCTCCTTCCTGTTCTACTGTCAGCACCTAGCTTTATTAGTCCCTAACGGCCCTGGTTGTATCTaGCACTGCCACTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLPSFLFYCQHLALLVPNGPGCI*HCHFLL Trigger: GAGGAGGAAGTGGCAGTGCCAGATACAACCAGGGCC...GTTAGGGACTAATAAAGCTAGGTGCTGACAGTAGAACAGGAAGGAGGGTAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR TCA 90 bp | TTTATGTGTCCATTTTCAATACCAGGTACCCCCATGCCAATAGTACCATTCCTCCCAGTCCCCTACTGCTaGGGCAGCCATGGGCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: FMCPFSIPGTPMPIVPFLPVPYC*GSHGLH Trigger: ATGTAGCCCATGGCTGCCTCAGCAGTAGGGGACTGG...GAGGAATGGTACTATTGGCATGGGGGTACCTGGTATTGAAAATGGACACATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | GCCCAAAGATTTAAAAGAGCTGAACCATCCTTCCTAAATAAATATCCCCAGTTCCGGGCCCCCAGCACCTaGCGAGTCTCTGCACAACTC | + |
|
Preference number: 4 (lower is better) Translates to: AQRFKRAEPSFLNKYPQFRAPST*RVSAQL Trigger: GAGTTGTGCAGAGACTCGGCAGGTGCTGGGGGCCCG...GAACTGGGGATATTTATTTAGGAAGGATGGTTCAGCTCTTTTAAATCTTTGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | GCCAATAGTACCATTCCTCCCCACTTTCAAGTTCCTTCAACCCCGTGTCCCACCCACTGGTACCTTAAGTaGTTCGCTGACCACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ANSTIPPHFQVPSTPCPTHWYLK*FADHIS Trigger: AGAAATGTGGTCAGCGAAGCACTTAAGGTACCAGTG...GGTGGGACACGGGGTTGAAGGAACTTGAAAGTGGGGAGGAATGGTACTATTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGCAACAAAACTCAGGTTCTACCCTCCTTCCTGTTCTACTGTCAGCACCTAGACCCGGACACAGATaGAGCAGCAAAAGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRQQNSGSTLLPVLLSAPRPGHR*SSKSRR Trigger: TCTCCTGCTTTTGCTGCTCCATCTGTGTCCGGGTCT...AGGTGCTGACAGTAGAACAGGAAGGAGGGTAGAACCTGAGTTTTGTTGCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | ATTAATTGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTCTGCTCTGTCTCACTaGAACAGCAGGTGTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: INWKLLDLGPQPFTHKVPSALSH*NSRCTP Trigger: AGGAGTACACCTGCTGTTCCAGTGAGACAGAGCAGA...AGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR TCA 90 bp | TTAGTCCCTAACTCTCAATCCTCCTGCCTCAGCATCCCAAAGAATAATGGGTTTATGGAGGCCAACAGATaGCCCCAGATTCCTGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LVPNSQSSCLSIPKNNGFMEANR*PQIPAS Trigger: CGAAGCAGGAATCTGGGGTCATCTGTTGGCCTCCAT...AAACCCATTATTCTTTGGGATGCTGAGGCAGGAGGATTGAGAGTTAGGGACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTCCCTAACTCTCAATCCTCCTGCCTCAGCATCCCAAAGAATAATGGGTTTTCTCTCCAGGAGCTGTaGCCAGAAATCCGCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVPNSQSSCLSIPKNNGFSLQEL*PEIRQG Trigger: ACCTTGGCGGATTTCTGGGCACAGCTCCTGGAGAGA...AAACCCATTATTCTTTGGGATGCTGAGGCAGGAGGATTGAGAGTTAGGGACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTCCCTAACTCTCAATCCTCCTGCCTCAGCATCCCAAAGAATAATGGGTTTGAGTCTCCGAAGGGCTaGAGAGAGCCATCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVPNSQSSCLSIPKNNGFESPKG*REPSAV Trigger: AACTGCTGATGGCTCTCTGCAGCCCTTCGGAGACTC...AAACCCATTATTCTTTGGGATGCTGAGGCAGGAGGATTGAGAGTTAGGGACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTCCCTAACTCTCAATCCTCCTGCCTCAGCATCCCAAAGAATAATGGGTTTGCATCAGGGCCTGTCTaGAGCCTTCCAACACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVPNSQSSCLSIPKNNGFASGPV*SLPTLV Trigger: TACCAGTGTTGGAAGGCTGCAGACAGGCCCTGATGC...AAACCCATTATTCTTTGGGATGCTGAGGCAGGAGGATTGAGAGTTAGGGACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | ACACTGAAATATGAAGTGGAAGTTTGTGATGGATGTGGATGGCAAAGGTCGCTATCCGGGTTGTGGAGCTaGTCATTCAAGGAGCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TLKYEVEVCDGCGWQRSLSGLWS*SFKEPT Trigger: CGTGGGCTCCTTGAATGAGCAGCTCCACAACCCGGA...TAGCGACCTTTGCCATCCACATCCATCACAAACTTCCACTTCATATTTCAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR GCA 90 bp | TTTATGTGTCCATTTTCAATACCAGGTACCCCCATGCCAATAGTACCATTCCTCCAGTCGTCTGCATACTaGTGTCCCCCTCCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FMCPFSIPGTPMPIVPFLQSSAY*CPPPEP Trigger: TGGCTCTGGAGGGGGACAGCAGTATGCAGACGACTG...GAGGAATGGTACTATTGGCATGGGGGTACCTGGTATTGAAAATGGACACATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCCATTTTCAATACCAGGTACCCCCATGCCAATAGTACCATTCCTCCCCAGGGAAACTGTATTGTaGGTGCAGCAAAGGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MCPFSIPGTPMPIVPFLPRETVL*VQQREG Trigger: GCCTTCCCTTTGCTGCACCCACAATACAGTTTCCCT...GGGGAGGAATGGTACTATTGGCATGGGGGTACCTGGTATTGAAAATGGACACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCCATTTTCAATACCAGGTACCCCCATGCCAATAGTACCATTCCTCCCCAAGGAAAAGGGTCCTTaGAGTTTCTCAGCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MCPFSIPGTPMPIVPFLPKEKGP*SFSASS Trigger: GCTGCTGGCTGAGAAACTCCAAGGACCCTTTTCCTT...GGGGAGGAATGGTACTATTGGCATGGGGGTACCTGGTATTGAAAATGGACACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAGAGGCAACAAAACTCAGGTTCTACCCTCCTTCCTGTTCTACTGTCAGGGCCCTGGTTGTATCTaGCACTGCCACTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKRGNKTQVLPSFLFYCQGPGCI*HCHFLL Trigger: GAGGAGGAAGTGGCAGTGCCAGATACAACCAGGGCC...CTGACAGTAGAACAGGAAGGAGGGTAGAACCTGAGTTTTGTTGCCTCTTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR TCA 90 bp | GCCCAAAGATTTAAAAGAGCTGAACCATCCTTCCTAAATAAATATCCCCAGTTCCCAGTCCCCTACTGCTaGGGCAGCCATGGGCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: AQRFKRAEPSFLNKYPQFPVPYC*GSHGLH Trigger: ATGTAGCCCATGGCTGCCTCAGCAGTAGGGGACTGG...GAACTGGGGATATTTATTTAGGAAGGATGGTTCAGCTCTTTTAAATCTTTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | CTAGTTTATGTGTCCATTTTCAATACCAGGTACCCCCATGCCAATAGTACCATTTCCGGGTTGTGGAGCTaGTCATTCAAGGAGCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LVYVSIFNTRYPHANSTISGLWS*SFKEPT Trigger: CGTGGGCTCCTTGAATGAGCAGCTCCACAACCCGGA...AATGGTACTATTGGCATGGGGGTACCTGGTATTGAAAATGGACACATAAACTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTCCCTAACTCTCAATCCTCCTGCCTCAGCATCCCAAAGAATAATGGGTTTGGTTGTATCTGGCACTaGCACTTCCTCCTCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LVPNSQSSCLSIPKNNGFGCIWH*HFLLSL Trigger: GAGTGAGAGGAGGAAGTGGCAGTGCCAGATACAACC...AAACCCATTATTCTTTGGGATGCTGAGGCAGGAGGATTGAGAGTTAGGGACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAAGAGGCAACAAAACTCAGGTTCTACCCTCCTTCCTGTTCTACTGTCAGCATGACCCCAGATTCCTaGTTCGGCCCTGGTTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: LKEATKLRFYPPSCSTVSMTPDS*FGPGCI Trigger: GATACAACCAGGGCCGAAGCAGGAATCTGGGGTCAT...GCTGACAGTAGAACAGGAAGGAGGGTAGAACCTGAGTTTTGTTGCCTCTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCCATTTTCAATACCAGGTACCCCCATGCCAATAGTACCATTCCTCCCCAGATCTTCACCCCAATaGACTCAGCAGCCAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MCPFSIPGTPMPIVPFLPRSSPQ*TQQPVQ Trigger: TTGAACTGGCTGCTGAGTCCATTGGGGTGAAGATCT...GGGGAGGAATGGTACTATTGGCATGGGGGTACCTGGTATTGAAAATGGACACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAAGAGGCAACAAAACTCAGGTTCTACCCTCCTTCCTGTTCTACTGTCAGCTCTGCTCTGTCTCACTaGAACAGCAGGTGTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKEATKLRFYPPSCSTVSSALSH*NSRCTP Trigger: AGGAGTACACCTGCTGTTCCAGTGAGACAGAGCAGA...GCTGACAGTAGAACAGGAAGGAGGGTAGAACCTGAGTTTTGTTGCCTCTTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTACCCTCCTTCCTGTTCTACTGTCAGCACCTAGCTTTATTAGTCCCTAACAGATCTTCACCCCAATaGACTCAGCAGCCAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLPSFLFYCQHLALLVPNRSSPQ*TQQPVQ Trigger: TTGAACTGGCTGCTGAGTCCATTGGGGTGAAGATCT...GTTAGGGACTAATAAAGCTAGGTGCTGACAGTAGAACAGGAAGGAGGGTAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTCCCTAACTCTCAATCCTCCTGCCTCAGCATCCCAAAGAATAATGGGTTTAAACTGTATTGTGGGTaGAGCAAAGGGAAGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVPNSQSSCLSIPKNNGFKLYCG*SKGKAL Trigger: GAGAGCCTTCCCTTTGCTGCACCCACAATACAGTTT...AAACCCATTATTCTTTGGGATGCTGAGGCAGGAGGATTGAGAGTTAGGGACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAAGAGGCAACAAAACTCAGGTTCTACCCTCCTTCCTGTTCTACTGTCAGCAGATCTTCACCCCAATaGACTCAGCAGCCAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKEATKLRFYPPSCSTVSRSSPQ*TQQPVQ Trigger: TTGAACTGGCTGCTGAGTCCATTGGGGTGAAGATCT...GCTGACAGTAGAACAGGAAGGAGGGTAGAACCTGAGTTTTGTTGCCTCTTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS GCA 90 bp | GAGGGAGGGATTAGGTTTAAGCTATATCCCCGGGCCCCCAGCACCTaGCGAGTCTCTGCACAACTCCGGACGACCTTTGCCTCACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EGGIRFKLYPRAPST*RVSAQLRTTFASLP Trigger: TGGGAGTGAGGCAAAGGTCGTCCGGAGTTGTGCAGAGACTCGGCAGGTGCTGGGGGCCCGGGGATATAGCTTAAACCTAATCCCTCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS TCA 90 bp | GCAGCCATGGGCTACATTGAGGCAGAAGCCCCGGCAGGGCATAAGTaGAGGAACTCCCCGACAAAGAGGGCAGCCAATCAGACGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAMGYIEAEAPAGHK*RNSPTKRAANQTHQ Trigger: CTGATGCGTCTGATTGGCTGCCCTCTTTGTCGGGGAGTTCCTTCACTTATGCCCTGCCGGGGCTTCTGCCTCAATGTAGCCCATGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CAA 90 bp | AATAGTACCATTCCTCCCCACTTTCAAGTTCCTTCAACCCCGTGTCCCACCCCCCAGCCATGGGCTACATaGAGGCAGAAGCCCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NSTIPPHFQVPSTPCPTPQPWAT*RQKPRQ Trigger: CTGCCGGGGCTTCTGCCTCAATGTAGCCCATGGCTG...GGGGGTGGGACACGGGGTTGAAGGAACTTGAAAGTGGGGAGGAATGGTACTATT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CAA 90 bp | GATGCTAGGGCGCCCCTCCCTCGTTATCGAAGTACAAGCAGGGTCAGGGCTGAGAGGAGGGAAACTGTATaGTGGGTGCAGCAAAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DARAPLPRYRSTSRVRAERRETV*WVQQRE Trigger: TTCCCTTTGCTGCACCCACAATACAGTTTCCCTCCT...CTCAGCCCTGACCCTGCTTGTACTTCGATAACGAGGGAGGGGCGCCCTAGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAACAAAACTCAGGTTCTACCCTCCTTCCTGTTCTACTGTCAGCACCTAGCCAGCCATGGGCTACATaGAGGCAGAAGCCCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQQNSGSTLLPVLLSAPSQPWAT*RQKPRQ Trigger: CTGCCGGGGCTTCTGCCTCAATGTAGCCCATGGCTG...GCTAGGTGCTGACAGTAGAACAGGAAGGAGGGTAGAACCTGAGTTTTGTTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CAA 90 bp | GGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCCGTATCCAACTCCGGGTaGTGGAGCTGCTCATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GNSWIWGPSHSPTKSLSAVSNSG*WSCSFK Trigger: CTTGAATGAGCAGCTCCACAACCCGGAGTTGGATAC...GGCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 |
||
| CDS CCA 90 bp | TTCACCCCAATGGACTCAGCAGCCAGTTCAAAGGAAAAGGGTCCTTaGAGTTTCTCAGCCAGCAGCAGGAGACCATCCAGATATCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FTPMDSAASSKEKGP*SFSASSRRPSRYPP Trigger: GGGCGGATATCTGGATGGTCTCCTGCTGCTGGCTGAGAAACTCCAAGGACCCTTTTCCTTTGAACTGGCTGCTGAGTCCATTGGGGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTTTCTGCAGGAGGGAAACTGTATaGTGGGTGCAGCAAAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WKLLDLGPQPFTHKVPFCRRETV*WVQQRE Trigger: TTCCCTTTGCTGCACCCACAATACAGTTTCCCTCCT...GCAGAAAGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGTCCCCCTCCAGAGCCACTGGCATCTTCATCCGCATCATGCATGTCAAAAAGGAAAAGGGTCCTaGGAGTTTCTCAGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TAVPLQSHWHLHPHHACQKGKGS*EFLSQQ Trigger: CTGCTGGCTGAGAAACTCCAAGGACCCTTTTCCTTT...TTGACATGCATGATGCGGATGAAGATGCCAGTGGCTCTGGAGGGGGACAGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000161984.8 |
||
| CDS-3UTR CAA 90 bp | AGGTACCCCCATGCCAATAGTACCATTCCTCCCCACTTTCAAGTTCCTTCAACCAGGAGGGAAACTGTATaGTGGGTGCAGCAAAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RYPHANSTIPPHFQVPSTRRETV*WVQQRE Trigger: TTCCCTTTGCTGCACCCACAATACAGTTTCCCTCCT...GGTTGAAGGAACTTGAAAGTGGGGAGGAATGGTACTATTGGCATGGGGGTACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CAA 90 bp | ATTAATTGGAAACTCCTGGATTTGGGGCCCCAGCCATTCACCCACAAAGTCCCTAAAGGAAAAGGGTCCTaGGAGTTTCTCAGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: INWKLLDLGPQPFTHKVPKGKGS*EFLSQQ Trigger: CTGCTGGCTGAGAAACTCCAAGGACCCTTTTCCTTT...AGGGACTTTGTGGGTGAATGGCTGGGGCCCCAAATCCAGGAGTTTCCAATTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGTGTCCATTTTCAATACCAGGTACCCCCATGCCAATAGTACCATTCCTCAAAGGAAAAGGGTCCTaGGAGTTTCTCAGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FMCPFSIPGTPMPIVPFLKGKGS*EFLSQQ Trigger: CTGCTGGCTGAGAAACTCCAAGGACCCTTTTCCTTT...GAGGAATGGTACTATTGGCATGGGGGTACCTGGTATTGAAAATGGACACATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS CAA 90 bp | GGGCCCCCAGCACCTGCCGAGTCTCTGCACAACTCCGGACGACCTTaGCCTCACTCCCATGTCCCGGCCCTAGACCCGGACACAGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPPAPAESLHNSGRP*PHSHVPALDPDTDG Trigger: TCCATCTGTGTCCGGGTCTAGGGCCGGGACATGGGAGTGAGGCAAAGGTCGTCCGGAGTTGTGCAGAGACTCGGCAGGTGCTGGGGGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
||
| CDS CAA 72 bp | GCACCTGCCGAGTCTCTGCACAACTCCGGACGACCTTaGCCTCACTCCCATGTCCCGGCCCTAGACCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: APAESLHNSGRP*PHSHVPALDPD Trigger: GTCCGGGTCTAGGGCCGGGACATGGGAGTGAGGCAAAGGTCGTCCGGAGTTGTGCAGAGACTCGGCAGGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| CDS GCA 72 bp | GCTATATCCCCGGGCCCCCAGCACCTGCCGAGTCTCTaGACAACTCCGGACGACCTTTGCCTCACTCCCATG | + |
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Preference number: 6 (lower is better) Translates to: AISPGPQHLPSL*TTPDDLCLTPM Trigger: CATGGGAGTGAGGCAAAGGTCGTCCGGAGTTGTGCAGAGACTCGGCAGGTGCTGGGGGCCCGGGGATATAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| CDS CCA 72 bp | TCACTCCCATGTCCCGGCCCTAGACCCGGACACAGATaGAGCAGCAAAAGCAGGAGAGGTCGCAGCGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: SLPCPGPRPGHR*SSKSRRGRSAD Trigger: GTCTGCGCTGCGACCTCTCCTGCTTTTGCTGCTCCATCTGTGTCCGGGTCTAGGGCCGGGACATGGGAGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| CDS CCA 72 bp | AGTCGTCTGCATACTGCTGTCCCCCTCCAGAGCCACTaGCATCTTCATCCAGCGCAGCCGCCTTCATTCGAG | + |
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Preference number: 6 (lower is better) Translates to: SRLHTAVPLQSH*HLHPAQPPSFE Trigger: CTCGAATGAAGGCGGCTGCGCTGGATGAAGATGCCAGTGGCTCTGGAGGGGGACAGCAGTATGCAGACGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014089.9 |
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| CDS GCA 72 bp | ATTAGGTTTAAGCTATATCCCCGGGCCCCCAGCACCTaGCGAGTCTCTGCACAACTCCGGACGACCTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: IRFKLYPRAPST*RVSAQLRTTFA Trigger: GGCAAAGGTCGTCCGGAGTTGTGCAGAGACTCGGCAGGTGCTGGGGGCCCGGGGATATAGCTTAAACCTAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| CDS CAA 90 bp | CTTCACCCCAATGGACTCAGCAGCCAGTTCAAAGGAAAAGGGTCCTaGGAGTTTCTCAGCCAGCAGCAGGAGACCATCCAGATATCCGCC | + |
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Preference number: 6 (lower is better) Translates to: LHPNGLSSQFKGKGS*EFLSQQQETIQISA Trigger: GGCGGATATCTGGATGGTCTCCTGCTGCTGGCTGAGAAACTCCAAGGACCCTTTTCCTTTGAACTGGCTGCTGAGTCCATTGGGGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| CDS CCA 72 bp | ATGGACTCAGCAGCCAGTTCAAAGGAAAAGGGTCCTTaGAGTTTCTCAGCCAGCAGCAGGAGACCATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: MDSAASSKEKGP*SFSASSRRPSR Trigger: TCTGGATGGTCTCCTGCTGCTGGCTGAGAAACTCCAAGGACCCTTTTCCTTTGAACTGGCTGCTGAGTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| CDS CAA 72 bp | AATGGACTCAGCAGCCAGTTCAAAGGAAAAGGGTCCTaGGAGTTTCTCAGCCAGCAGCAGGAGACCATCCAG | + |
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Preference number: 6 (lower is better) Translates to: NGLSSQFKGKGS*EFLSQQQETIQ Trigger: CTGGATGGTCTCCTGCTGCTGGCTGAGAAACTCCAAGGACCCTTTTCCTTTGAACTGGCTGCTGAGTCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| CDS TCA 72 bp | AACTCATTAAACTTTCTATGCCGGGCAGCCAGTGTGTaGATCAGGAAAGAGCCACTGTCCTCTACCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: NSLNFLCRAASV*IRKEPLSSTRP Trigger: TGGCCTGGTAGAGGACAGTGGCTCTTTCCTGATTCACACACTGGCTGCCCGGCATAGAAAGTTTAATGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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| CDS GCA 72 bp | ACCTTCGCTGACACCTTTACACTGTTTTCCTGTAAGTaGATCAAACCTTCTGAGATCTTCACCCCAATGGAC | + |
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Preference number: 6 (lower is better) Translates to: TFADTFTLFSCK*IKPSEIFTPMD Trigger: GTCCATTGGGGTGAAGATCTCAGAAGGTTTGATGCACTTACAGGAAAACAGTGTAAAGGTGTCAGCGAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014089.9 ENSMUST00000161827.8 ENSMUST00000161984.8 |
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