Pregenerated sensors for GPC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034220Ensembl transcript IDs: ENSMUST00000045970.8
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGTCCCCAGCGGGAAGAGGCAGGAGAGGAAGGCACAGGCTCACTTaGGGTCTCCGTTGGGTTGTAGCTAACAGCCGCCCTTCTGGTTGG | + |
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Preference number: 1 (lower is better) Translates to: ESPAGRGRRGRHRLT*GLRWVVANSRPSGW Trigger: CCAACCAGAAGGGCGGCTGTTAGCTACAACCCAACGGAGACCTCAAGTGAGCCTGTGCCTTCCTCTCCTGCCTCTTCCCGCTGGGGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CCA 90 bp | GCAACATACTGGCATCCCTTGCAGGCTTCCTGGGGAGCTGCAGGATaGGCCTCAATTTCTGACATCTGTGGCCCATGGGGTCTGGTAGGG | + |
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Preference number: 1 (lower is better) Translates to: ATYWHPLQASWGAAG*ASISDICGPWGLVG Trigger: CCCTACCAGACCCCATGGGCCACAGATGTCAGAAATTGAGGCCCATCCTGCAGCTCCCCAGGAAGCCTGCAAGGGATGCCAGTATGTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CCA 90 bp | CCTGGATATAGCAACTCAGCATCCCCTAGGCCCTGGAAGGGAAGATaGAGCCTTGACAGCCTTGGTAAGCCAGGTGCCCCCAGGTCTCGA | + |
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Preference number: 1 (lower is better) Translates to: PGYSNSASPRPWKGR*SLDSLGKPGAPRSR Trigger: TCGAGACCTGGGGGCACCTGGCTTACCAAGGCTGTCAAGGCTCCATCTTCCCTTCCAGGGCCTAGGGGATGCTGAGTTGCTATATCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR GCA 90 bp | TTGAAGGCCCTGCCAGAGCCTGGACAGCAACATACTGGCATCCCTTaGAGGCTTCCTGGGGAGCTGCAGGATGGGCCTCAATTTCTGACA | + |
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Preference number: 1 (lower is better) Translates to: LKALPEPGQQHTGIP*RLPGELQDGPQFLT Trigger: TGTCAGAAATTGAGGCCCATCCTGCAGCTCCCCAGGAAGCCTGCAAGGGATGCCAGTATGTTGCTGTCCAGGCTCTGGCAGGGCCTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR GCA 90 bp | GCCCCCAGGTCTCGAGGCCATAGGAGGAAACCAGATTCCAAGTGGTaGCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGTAGC | + |
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Preference number: 1 (lower is better) Translates to: APRSRGHRRKPDSKW*PEPLQCCQGRWRCS Trigger: GCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGGAATCTGGTTTCCTCCTATGGCCTCGAGACCTGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CCA 90 bp | ATGCATAAACTTGAAGGCCCTGCCAGAGCCTGGACAGCAACATACTaGCATCCCTTGCAGGCTTCCTGGGGAGCTGCAGGATGGGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: MHKLEGPARAWTATY*HPLQASWGAAGWAS Trigger: TGAGGCCCATCCTGCAGCTCCCCAGGAAGCCTGCAAGGGATGCCAGTATGTTGCTGTCCAGGCTCTGGCAGGGCCTTCAAGTTTATGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CCA 90 bp | GGTGCCCCCAGGTCTCGAGGCCATAGGAGGAAACCAGATTCCAAGTaGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGT | + |
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Preference number: 1 (lower is better) Translates to: GAPRSRGHRRKPDSK*CPEPLQCCQGRWRC Trigger: ACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGGAATCTGGTTTCCTCCTATGGCCTCGAGACCTGGGGGCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR TCA 90 bp | CCCACAGACCAATTATGGAGAATACCCATCCTGGACCAGGGGACCTaGCTACTGGGCAGGCCTTGGTGCTGTGCTGGCAATAGCCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: PTDQLWRIPILDQGT*LLGRPWCCAGNSLS Trigger: AGAGAGGCTATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCTGGTCCAGGATGGGTATTCTCCATAATTGGTCTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR TCA 90 bp | GACAAGGACACTGAGGGTCTGAATGTGCATGTCTGTAAAAGCCCTTaGCTGTCAATGCTGCCCCAGCTCCTGCAGAGCTGCCTGGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: DKDTEGLNVHVCKSP*LSMLPQLLQSCLGQ Trigger: CTGACCCAGGCAGCTCTGCAGGAGCTGGGGCAGCATTGACAGTCAAGGGCTTTTACAGACATGCACATTCAGACCCTCAGTGTCCTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CCA 90 bp | AGTGGCACTAGCAGGGCTGTGGCTGGGTTGAGTGTGCTCAGGGCATaGGCCCAACAAACCCACAGACCAATTATGGAGAATACCCATCCT | + |
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Preference number: 1 (lower is better) Translates to: SGTSRAVAGLSVLRA*AQQTHRPIMENTHP Trigger: AGGATGGGTATTCTCCATAATTGGTCTGTGGGTTTGTTGGGCCCATGCCCTGAGCACACTCAACCCAGCCACAGCCCTGCTAGTGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR TCA 90 bp | GTCCTGGTCTGCTGTGTGTGGGGATCCTGGCTGCAGAGCTTCTTCTaGGTAGAAGGTATCATGCATAAACTTGAAGGCCCTGCCAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: VLVCCVWGSWLQSFF*VEGIMHKLEGPARA Trigger: GGCTCTGGCAGGGCCTTCAAGTTTATGCATGATACCTTCTACTCAGAAGAAGCTCTGCAGCCAGGATCCCCACACACAGCAGACCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR GCA 90 bp | CATAGGAGGAAACCAGATTCCAAGTGGTGCCCTGAGCCTCTCCAGTaGTGTCAAGGAAGATGGAGATGTAGCGCTCAGTGGACAAGGACA | + |
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Preference number: 1 (lower is better) Translates to: HRRKPDSKWCPEPLQ*CQGRWRCSAQWTRT Trigger: TGTCCTTGTCCACTGAGCGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGGAATCTGGTTTCCTCCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CCA 90 bp | TTTTTGAGAACCAGATTCACTGAGCTCCACAGTGGTACAGGGTCCTaGTCTGCTGTGTGTGGGGATCCTGGCTGCAGAGCTTCTTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: FLRTRFTELHSGTGS*SAVCGDPGCRASSE Trigger: CTCAGAAGAAGCTCTGCAGCCAGGATCCCCACACACAGCAGACCAGGACCCTGTACCACTGTGGAGCTCAGTGAATCTGGTTCTCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CCA 90 bp | GTGTCAGGCTATTCCTTGTCCCTACACTGCTCTCTTGGGTACCTCTaGGGCACCCTGGCAGGAATGAGAACTTTTCTATGGCTAAGACAA | + |
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Preference number: 1 (lower is better) Translates to: VSGYSLSLHCSLGYL*GTLAGMRTFLWLRQ Trigger: TTGTCTTAGCCATAGAAAAGTTCTCATTCCTGCCAGGGTGCCCCAGAGGTACCCAAGAGAGCAGTGTAGGGACAAGGAATAGCCTGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CCA 90 bp | ATAGACTGGTGTGTCAGGCTATTCCTTGTCCCTACACTGCTCTCTTaGGTACCTCTGGGGCACCCTGGCAGGAATGAGAACTTTTCTATG | + |
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Preference number: 1 (lower is better) Translates to: IDWCVRLFLVPTLLS*VPLGHPGRNENFSM Trigger: CATAGAAAAGTTCTCATTCCTGCCAGGGTGCCCCAGAGGTACCCAAGAGAGCAGTGTAGGGACAAGGAATAGCCTGACACACCAGTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR TCA 90 bp | GCAGGAATGAGAACTTTTCTATGGCTAAGACAATGGCATGTAGATTaGGGTGTGTTAAAGAGGTGGAAGGCTGGTGGAACCCACGTAGGC | + |
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Preference number: 1 (lower is better) Translates to: AGMRTFLWLRQWHVD*GVLKRWKAGGTHVG Trigger: GCCTACGTGGGTTCCACCAGCCTTCCACCTCTTTAACACACCTCAATCTACATGCCATTGTCTTAGCCATAGAAAAGTTCTCATTCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR GCA 90 bp | GAGGGTGAACTAGCTCTGAGTATCTTAAGTTACTTAGAACATTTCTaGAGATGTAGGATAACTTGGGATAGACTGGTGTGTCAGGCTATT | + |
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Preference number: 1 (lower is better) Translates to: EGELALSILSYLEHF*RCRITWDRLVCQAI Trigger: AATAGCCTGACACACCAGTCTATCCCAAGTTATCCTACATCTGCAGAAATGTTCTAAGTAACTTAAGATACTCAGAGCTAGTTCACCCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CCA 90 bp | AGTATCTTAAGTTACTTAGAACATTTCTGCAGATGTAGGATAACTTaGGATAGACTGGTGTGTCAGGCTATTCCTTGTCCCTACACTGCT | + |
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Preference number: 1 (lower is better) Translates to: SILSYLEHFCRCRIT*DRLVCQAIPCPYTA Trigger: AGCAGTGTAGGGACAAGGAATAGCCTGACACACCAGTCTATCCCAAGTTATCCTACATCTGCAGAAATGTTCTAAGTAACTTAAGATACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CAA 90 bp | CAGCATCCCCTAGGCCCTGGAAGGGAAGATGGAGCCTTGACAGCCTaGGTAAGCCAGGTGCCCCCAGGTCTCGAGGCCATAGGAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: QHPLGPGREDGALTA*VSQVPPGLEAIGGN Trigger: GTTTCCTCCTATGGCCTCGAGACCTGGGGGCACCTGGCTTACCAAGGCTGTCAAGGCTCCATCTTCCCTTCCAGGGCCTAGGGGATGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGACCTGACTACTGGGCAGGCCTTGGTGCTGTGCTGGCAATAGCCTCTCTAAGCTTCTGGGGGTGGTaGAGGAGGGTAGGGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RGPDYWAGLGAVLAIASLSFWGW*RRVGEE Trigger: CTCCTCCCCTACCCTCCTGCACCACCCCCAGAAGCT...TAGAGAGGCTATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTCAATTTCTGACATCTGTGGCCCATGGGGTCTGGTAGGGAGTCCCCAGCGGATGAGCTTCTGGGGGTaGTGCAGGAGGGTAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: ASISDICGPWGLVGSPQRMSFWG*CRRVGE Trigger: CTCCCCTACCCTCCTGCACCACCCCCAGAAGCTCAT...CCGCTGGGGACTCCCTACCAGACCCCATGGGCCACAGATGTCAGAAATTGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGTGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGTAGCGTCCTGCAGAGCTGCCTaGGTCAGGAAGGGGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PSGALSLSSAVKEDGDVASCRAA*VRKGPR Trigger: CCTGGGCCCCTTCCTGACCCAGGCAGCTCTGCAGGA...CGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CAA 90 bp | TCCCAGTGCCCCTGCTTGAGTGGCACTAGCAGGGCTGTGGCTGGGTaGAGTGTGCTCAGGGCATGGGCCCAACAAACCCACAGACCAATT | + |
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Preference number: 2 (lower is better) Translates to: SQCPCLSGTSRAVAG*SVLRAWAQQTHRPI Trigger: AATTGGTCTGTGGGTTTGTTGGGCCCATGCCCTGAGCACACTCAACCCAGCCACAGCCCTGCTAGTGCCACTCAAGCAGGGGCACTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGGGACCTGACTACTGGGCAGGCCTTGGTGCTGTGCTGGCAATAGCCTCTTTCTGGTTGGCCTCATaGGCTTCTGGGGGTGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: TRGPDYWAGLGAVLAIASFWLAS*ASGGGA Trigger: TGCACCACCCCCAGAAGCTCATGAGGCCAACCAGAA...AGAGGCTATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CAA 90 bp | CTTGAAGGCCCTGCCAGAGCCTGGACAGCAACATACTGGCATCCCTaGCAGGCTTCCTGGGGAGCTGCAGGATGGGCCTCAATTTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LEGPARAWTATYWHP*QASWGAAGWASISD Trigger: GTCAGAAATTGAGGCCCATCCTGCAGCTCCCCAGGAAGCCTGCAAGGGATGCCAGTATGTTGCTGTCCAGGCTCTGGCAGGGCCTTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTCAATTTCTGACATCTGTGGCCCATGGGGTCTGGTAGGGAGTCCCCAGCGGGGCTTTTGGGGACACTaGCTCGCAGCTGACCTGATA | + |
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Preference number: 2 (lower is better) Translates to: ASISDICGPWGLVGSPQRGFWGH*LAADLI Trigger: TATCAGGTCAGCTGCGAGCCAGTGTCCCCAAAAGCC...CCGCTGGGGACTCCCTACCAGACCCCATGGGCCACAGATGTCAGAAATTGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGTAGCGCTCAGGGCCCTGCCAGAGCCTaGACAGCAACATACTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: WCPEPLQCCQGRWRCSAQGPARA*TATYWH Trigger: ATGCCAGTATGTTGCTGTCCAGGCTCTGGCAGGGCC...CTGAGCGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGGGACCTGACTACTGGGCAGGCCTTGGTGCTGTGCTGGCAATAGCCTCTAGATGTAGCGCTCAGTaGACAAGGACACTGAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: TRGPDYWAGLGAVLAIASRCSAQ*TRTLRV Trigger: GACCCTCAGTGTCCTTGTCCACTGAGCGCTACATCT...AGAGGCTATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGATTCCAAGTGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGAGCTGTTCCCCTGAAGTaGGGCTCCTCATGTGGACCA | + |
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Preference number: 2 (lower is better) Translates to: PDSKWCPEPLQCCQGRWRAVPLK*GSSCGP Trigger: TGGTCCACATGAGGAGCCTCACTTCAGGGGAACAGC...TCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGGAATCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGACCTGACTACTGGGCAGGCCTTGGTGCTGTGCTGGCAATAGCCTCTCTACCTGAGCCTCTCCAGTaGTGTCAAGGAAGATGGAGA | + |
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Preference number: 2 (lower is better) Translates to: RGPDYWAGLGAVLAIASLPEPLQ*CQGRWR Trigger: TCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGG...TAGAGAGGCTATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGGGACCTGACTACTGGGCAGGCCTTGGTGCTGTGCTGGCAATAGCCTCTAGGACACTGAGGGTCTaGATGTGCATGTCTGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: TRGPDYWAGLGAVLAIASRTLRV*MCMSVK Trigger: TTTTACAGACATGCACATTCAGACCCTCAGTGTCCT...AGAGGCTATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCCCAGCACTCAGAGCTACTGTCTCCTTATCCTGCCCTGGACCTCAAAAGGCGTCTGTTGCATGTTTTaGCCAAGACAGTCCTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CPSTQSYCLLILPWTSKGVCCMF*PRQSLG Trigger: CCCCAAGGACTGTCTTGGCCAAAACATGCAACAGAC...GCCTTTTGAGGTCCAGGGCAGGATAAGGAGACAGTAGCTCTGAGTGCTGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGTGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGTAGCGGAAATACATGGCTTTTaGGGACACTGGCTCGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PSGALSLSSAVKEDGDVAEIHGF*GHWLAA Trigger: AGCTGCGAGCCAGTGTCCCCAAAAGCCATGTATTTC...CGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR GCA 90 bp | GAGATAGATGTTCAATGGTTGCCACCACATGGAAACCCCAGGACTTTCCTACAGTACAGGGTCCTGGTCTaGTGTGTGTGGGGATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: EIDVQWLPPHGNPRTFLQYRVLV*CVWGSW Trigger: CCAGGATCCCCACACACAGCAGACCAGGACCCTGTA...CTGTAGGAAAGTCCTGGGGTTTCCATGTGGTGGCAACCATTGAACATCTATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CAA 90 bp | TTGGGATGTTCAGTTGGCACAGACAGGTATCTTCCCAGGCAGGACTaGGAGATAGATGTTCAATGGTTGCCACCACATGGAAACCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LGCSVGTDRYLPRQD*EIDVQWLPPHGNPR Trigger: CCTGGGGTTTCCATGTGGTGGCAACCATTGAACATCTATCTCCAAGTCCTGCCTGGGAAGATACCTGTCTGTGCCAACTGAACATCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR CCA 90 bp | GAGATAGATGTTCAATGGTTGCCACCACATGGAAACCCCAGGACTTTCCTACAGTGGACAGCAACATACTaGCATCCCTTGCAGGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: EIDVQWLPPHGNPRTFLQWTATY*HPLQAS Trigger: GGAAGCCTGCAAGGGATGCCAGTATGTTGCTGTCCA...CTGTAGGAAAGTCCTGGGGTTTCCATGTGGTGGCAACCATTGAACATCTATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CAA 90 bp | GGCAGGAATGAGAACTTTTCTATGGCTAAGACAATGGCATGTAGATaGAGGTGTGTTAAAGAGGTGGAAGGCTGGTGGAACCCACGTAGG | + |
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Preference number: 2 (lower is better) Translates to: GRNENFSMAKTMACR*RCVKEVEGWWNPRR Trigger: CCTACGTGGGTTCCACCAGCCTTCCACCTCTTTAACACACCTCAATCTACATGCCATTGTCTTAGCCATAGAAAAGTTCTCATTCCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR TCA 90 bp | GAGATAGATGTTCAATGGTTGCCACCACATGGAAACCCCAGGACTTTCCTACAGACACTGGCTCGCAGCTaGCCTGATACAAAATTAAAA | + |
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Preference number: 2 (lower is better) Translates to: EIDVQWLPPHGNPRTFLQTLARS*PDTKLK Trigger: TTTTAATTTTGTATCAGGTCAGCTGCGAGCCAGTGT...CTGTAGGAAAGTCCTGGGGTTTCCATGTGGTGGCAACCATTGAACATCTATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR GCA 90 bp | GAGATAGATGTTCAATGGTTGCCACCACATGGAAACCCCAGGACTTTCCTACAGTTAAATATGGTCTGTTaGATGTTTTGGCCAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: EIDVQWLPPHGNPRTFLQLNMVC*MFWPRQ Trigger: CTGTCTTGGCCAAAACATGCAACAGACCATATTTAA...CTGTAGGAAAGTCCTGGGGTTTCCATGTGGTGGCAACCATTGAACATCTATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CCA 72 bp | GCCGCCCTTCTGGTTGGCCTCATGAGCTTCTGGGGGTaGTGCAGGAGGGTAGGGGAGGAGTGTGCAGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: AALLVGLMSFWG*CRRVGEECAAR Trigger: TCTGGCTGCACACTCCTCCCCTACCCTCCTGCACCACCCCCAGAAGCTCATGAGGCCAACCAGAAGGGCGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR GCA 72 bp | CTCATCTCAGAGCCCAGGTCTAGCTCCCAGTGCCCCTaGTTGAGTGGCACTAGCAGGGCTGTGGCTGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: LISEPRSSSQCP*LSGTSRAVAGL Trigger: CAACCCAGCCACAGCCCTGCTAGTGCCACTCAAGCAGGGGCACTGGGAGCTAGACCTGGGCTCTGAGATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGGACCTGACTACTGGGCAGGCCTTGGTGCTGTGCTGGCAATAGCCTCTCTAGGCCCAGGCATCCTCTaGACCTGCAGTGCCAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: RGPDYWAGLGAVLAIASLGPGIL*TCSARS Trigger: AGACCTGGCACTGCAGGTCAAGAGGATGCCTGGGCC...TAGAGAGGCTATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGGACCTGACTACTGGGCAGGCCTTGGTGCTGTGCTGGCAATAGCCTCTCTAGGAGCCTTGACAGCCTaGGTAAGCCAGGTGCCCCCA | + |
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Preference number: 3 (lower is better) Translates to: RGPDYWAGLGAVLAIASLGALTA*VSQVPP Trigger: TGGGGGCACCTGGCTTACCAAGGCTGTCAAGGCTCC...TAGAGAGGCTATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR TCA 72 bp | GGCTTCCTGGGGAGCTGCAGGATGGGCCTCAATTTCTaGCATCTGTGGCCCATGGGGTCTGGTAGGGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: GFLGSCRMGLNF*HLWPMGSGRES Trigger: GGACTCCCTACCAGACCCCATGGGCCACAGATGTCAGAAATTGAGGCCCATCCTGCAGCTCCCCAGGAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR TCA 72 bp | AGCTGCCTGGGTCAGGAAGGGGCCCAGGCATCCTCTTaGCCTGCAGTGCCAGGTCTCATTGACCCTGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: SCLGQEGAQASS*PAVPGLIDPEL Trigger: TAGCTCAGGGTCAATGAGACCTGGCACTGCAGGTCAAGAGGATGCCTGGGCCCCTTCCTGACCCAGGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CCA 72 bp | CTCCGTTGGGTTGTAGCTAACAGCCGCCCTTCTGGTTaGCCTCATGAGCTTCTGGGGGTGGTGCAGGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: LRWVVANSRPSG*PHELLGVVQEG Trigger: ACCCTCCTGCACCACCCCCAGAAGCTCATGAGGCCAACCAGAAGGGCGGCTGTTAGCTACAACCCAACGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CCA 72 bp | GCAGGATGGGCCTCAATTTCTGACATCTGTGGCCCATaGGGTCTGGTAGGGAGTCCCCAGCGGGAAGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: AGWASISDICGP*GLVGSPQREEA Trigger: TGCCTCTTCCCGCTGGGGACTCCCTACCAGACCCCATGGGCCACAGATGTCAGAAATTGAGGCCCATCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CCA 72 bp | AGCAACTCAGCATCCCCTAGGCCCTGGAAGGGAAGATaGAGCCTTGACAGCCTTGGTAAGCCAGGTGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SNSASPRPWKGR*SLDSLGKPGAP Trigger: GGGGGCACCTGGCTTACCAAGGCTGTCAAGGCTCCATCTTCCCTTCCAGGGCCTAGGGGATGCTGAGTTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CCA 72 bp | TGGCATCCCTTGCAGGCTTCCTGGGGAGCTGCAGGATaGGCCTCAATTTCTGACATCTGTGGCCCATGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: WHPLQASWGAAG*ASISDICGPWG Trigger: ACCCCATGGGCCACAGATGTCAGAAATTGAGGCCCATCCTGCAGCTCCCCAGGAAGCCTGCAAGGGATGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CCA 72 bp | ACCAGATTCACTGAGCTCCACAGTGGTACAGGGTCCTaGTCTGCTGTGTGTGGGGATCCTGGCTGCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TRFTELHSGTGS*SAVCGDPGCRA Trigger: AGCTCTGCAGCCAGGATCCCCACACACAGCAGACCAGGACCCTGTACCACTGTGGAGCTCAGTGAATCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR TCA 72 bp | GAGGCTCCTCATGTGGACCACCAAGGCCAGTCTTTGTaGGCCCATCTGAGGGGACGGAACATACCCTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: EAPHVDHQGQSL*AHLRGRNIPSN Trigger: GTTTGAGGGTATGTTCCGTCCCCTCAGATGGGCTCACAAAGACTGGCCTTGGTGGTCCACATGAGGAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CCA 72 bp | TGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATaGAGATGTAGCGCTCAGTGGACAAGGACACTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WCPEPLQCCQGR*RCSAQWTRTLR Trigger: CCTCAGTGTCCTTGTCCACTGAGCGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CCA 72 bp | GGTGGAACCCACGTAGGCTGGCTGGCTCTGGTATCCTaGCTCCCTCCTCCCATAAACTTTGGGATGTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GGTHVGWLALVS*LPPPINFGMFS Trigger: ACTGAACATCCCAAAGTTTATGGGAGGAGGGAGCCAGGATACCAGAGCCAGCCAGCCTACGTGGGTTCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGTAGCGCTCAGGGTCTGTTGCATGTTTaGGCCAAGACAGTCCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: WCPEPLQCCQGRWRCSAQGLLHV*AKTVLG Trigger: CCCAAGGACTGTCTTGGCCAAAACATGCAACAGACC...CTGAGCGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR TCA 72 bp | CAATTATGGAGAATACCCATCCTGGACCAGGGGACCTaGCTACTGGGCAGGCCTTGGTGCTGTGCTGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: QLWRIPILDQGT*LLGRPWCCAGN Trigger: ATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCTGGTCCAGGATGGGTATTCTCCATAATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR GCA 72 bp | TCAAACAGTGTGGCAGAGTTGAGCGTAGTATGGCTGTaGCAGCTGCCACCTCCCACCTCACCTACGTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: SNSVAELSVVWL*QLPPPTSPTSY Trigger: GTATGACGTAGGTGAGGTGGGAGGTGGCAGCTGGCACAGCCATACTACGCTCAACTCTGCCACACTGTTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR GCA 72 bp | TCTCGAGGCCATAGGAGGAAACCAGATTCCAAGTGGTaGCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SRGHRRKPDSKW*PEPLQCCQGRW Trigger: CCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGGAATCTGGTTTCCTCCTATGGCCTCGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CCA 72 bp | TGGACAGCAACATACTGGCATCCCTTGCAGGCTTCCTaGGGAGCTGCAGGATGGGCCTCAATTTCTGACATC | + |
|
Preference number: 3 (lower is better) Translates to: WTATYWHPLQAS*GAAGWASISDI Trigger: GATGTCAGAAATTGAGGCCCATCCTGCAGCTCCCCAGGAAGCCTGCAAGGGATGCCAGTATGTTGCTGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CCA 72 bp | AGGTCTCGAGGCCATAGGAGGAAACCAGATTCCAAGTaGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSRGHRRKPDSK*CPEPLQCCQGR Trigger: TCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGGAATCTGGTTTCCTCCTATGGCCTCGAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CCA 72 bp | AGCAGGGCTGTGGCTGGGTTGAGTGTGCTCAGGGCATaGGCCCAACAAACCCACAGACCAATTATGGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SRAVAGLSVLRA*AQQTHRPIMEN Trigger: ATTCTCCATAATTGGTCTGTGGGTTTGTTGGGCCCATGCCCTGAGCACACTCAACCCAGCCACAGCCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR TCA 72 bp | ACTGAGGGTCTGAATGTGCATGTCTGTAAAAGCCCTTaGCTGTCAATGCTGCCCCAGCTCCTGCAGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TEGLNVHVCKSP*LSMLPQLLQSC Trigger: GCAGCTCTGCAGGAGCTGGGGCAGCATTGACAGTCAAGGGCTTTTACAGACATGCACATTCAGACCCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR GCA 72 bp | AAACCAGATTCCAAGTGGTGCCCTGAGCCTCTCCAGTaGTGTCAAGGAAGATGGAGATGTAGCGCTCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KPDSKWCPEPLQ*CQGRWRCSAQW Trigger: CCACTGAGCGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGGAATCTGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CCA 72 bp | CTTCCTGGATATAGCAACTCAGCATCCCCTAGGCCCTaGAAGGGAAGATGGAGCCTTGACAGCCTTGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPGYSNSASPRP*KGRWSLDSLGK Trigger: CTTACCAAGGCTGTCAAGGCTCCATCTTCCCTTCCAGGGCCTAGGGGATGCTGAGTTGCTATATCCAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR TCA 72 bp | GGACTCAAAGAACACACATTATCCACTGACACCGAGTaGCAGAGAAAGGACCCAGTACCCTGGCCACTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GLKEHTLSTDTE*QRKDPVPWPLS Trigger: GGACAGTGGCCAGGGTACTGGGTCCTTTCTCTGTCACTCGGTGTCAGTGGATAATGTGTGTTCTTTGAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCAATTTCTGACATCTGTGGCCCATGGGGTCTGGTAGGGAGTCCCCAGCGGATTAAATATGGTCTGTaGCATGTTTTGGCCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: ASISDICGPWGLVGSPQRIKYGL*HVLAKT Trigger: TGTCTTGGCCAAAACATGCAACAGACCATATTTAAT...CCGCTGGGGACTCCCTACCAGACCCCATGGGCCACAGATGTCAGAAATTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CCA 72 bp | TATTCCTTGTCCCTACACTGCTCTCTTGGGTACCTCTaGGGCACCCTGGCAGGAATGAGAACTTTTCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: YSLSLHCSLGYL*GTLAGMRTFLW Trigger: CCATAGAAAAGTTCTCATTCCTGCCAGGGTGCCCCAGAGGTACCCAAGAGAGCAGTGTAGGGACAAGGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR TCA 72 bp | AGATGTAGCGCTCAGTGGACAAGGACACTGAGGGTCTaGATGTGCATGTCTGTAAAAGCCCTTGACTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: RCSAQWTRTLRV*MCMSVKALDCQ Trigger: TTGACAGTCAAGGGCTTTTACAGACATGCACATTCAGACCCTCAGTGTCCTTGTCCACTGAGCGCTACATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CCA 72 bp | TATCTTCCCAGGCAGGACTTGGAGATAGATGTTCAATaGTTGCCACCACATGGAAACCCCAGGACTTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: YLPRQDLEIDVQ*LPPHGNPRTFL Trigger: TAGGAAAGTCCTGGGGTTTCCATGTGGTGGCAACCATTGAACATCTATCTCCAAGTCCTGCCTGGGAAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR TCA 72 bp | GGCTCACATGTACACACCGAGTCTTACCAGTTTAAATaGGGTCATGTCCACTGTAGGTCCCCAGCCTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: GSHVHTESYQFK*GHVHCRSPAFN Trigger: ATTAAAGGCTGGGGACCTACAGTGGACATGACCTCATTTAAACTGGTAAGACTCGGTGTGTACATGTGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CCA 72 bp | AGTTACTTAGAACATTTCTGCAGATGTAGGATAACTTaGGATAGACTGGTGTGTCAGGCTATTCCTTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SYLEHFCRCRIT*DRLVCQAIPCP Trigger: GGGACAAGGAATAGCCTGACACACCAGTCTATCCCAAGTTATCCTACATCTGCAGAAATGTTCTAAGTAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR GCA 72 bp | CTAGCTCTGAGTATCTTAAGTTACTTAGAACATTTCTaGAGATGTAGGATAACTTGGGATAGACTGGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LALSILSYLEHF*RCRITWDRLVC Trigger: ACACACCAGTCTATCCCAAGTTATCCTACATCTGCAGAAATGTTCTAAGTAACTTAAGATACTCAGAGCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTTCTGGGGGTGGTGCAGGAGGGTAGGGGAGGAGTGTGCAGCCAGAGGTGCCCACCTGGGCCTGGCTaGCGCAAGGACCAAGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ELLGVVQEGRGGVCSQRCPPGPG*RKDQGD Trigger: GTCACCTTGGTCCTTGCGGCAGCCAGGCCCAGGTGG...GCACCTCTGGCTGCACACTCCTCCCCTACCCTCCTGCACCACCCCCAGAAGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTTCTGGGGGTGGTGCAGGAGGGTAGGGGAGGAGTGTGCAGCCAGAGGTGCAGCTGGGGGTGCAGCTaGTTGAAGAGGCGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELLGVVQEGRGGVCSQRCSWGCS*LKRRSS Trigger: GCTGGAGCGCCTCTTCAAGCAGCTGCACCCCCAGCT...GCACCTCTGGCTGCACACTCCTCCCCTACCCTCCTGCACCACCCCCAGAAGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTTCTGGGGGTGGTGCAGGAGGGTAGGGGAGGAGTGTGCAGCCAGAGGTGCCCACCTCAGGGTTGTTaGTCTGGTTGGCCAGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ELLGVVQEGRGGVCSQRCPPQGC*SGWPAR Trigger: ACGGGCTGGCCAACCAGATCAACAACCCTGAGGTGG...GCACCTCTGGCTGCACACTCCTCCCCTACCCTCCTGCACCACCCCCAGAAGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTTCTGGGGGTGGTGCAGGAGGGTAGGGGAGGAGTGTGCAGCCAGAGGTGCCTCACCCGAGATCTCTaGCTGAGGCACATCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELLGVVQEGRGGVCSQRCLTRDL*LRHIAQ Trigger: CTGAGCGATGTGCCTCAGGCAGAGATCTCGGGTGAG...GCACCTCTGGCTGCACACTCCTCCCCTACCCTCCTGCACCACCCCCAGAAGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTTCTGGGGGTGGTGCAGGAGGGTAGGGGAGGAGTGTGCAGCCAGAGGTGCAGCAGCGGTCGTCACTaGCAGGACTCATGGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ELLGVVQEGRGGVCSQRCSSGRH*QDSWPS Trigger: AGATGGCCATGAGTCCTGCCAGTGACGACCGCTGCT...GCACCTCTGGCTGCACACTCCTCCCCTACCCTCCTGCACCACCCCCAGAAGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGGGGACCTGACTACTGGGCAGGCCTTGGTGCTGTGCTGGCAATAGCCTCTTGGGCAGGTGGCAGCTaGGGTCTTCTGTCCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRGPDYWAGLGAVLAIASWAGGS*GLLSLL Trigger: CAGGAGGGACAGAAGACCTCAGCTGCCACCTGCCCA...AGAGGCTATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR GCA 90 bp | GATATAGCAACTCAGCATCCCCTAGGCCCTGGAAGGGAAGATGGAGCCTTGACATGCAGCTCCGGCTCTTaGTGGCGGGGTCCCCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DIATQHPLGPGREDGALTCSSGS*WRGPRG Trigger: CCCGCGGGGACCCCGCCAGCAAGAGCCGGAGCTGCA...TGTCAAGGCTCCATCTTCCCTTCCAGGGCCTAGGGGATGCTGAGTTGCTATATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGTAGCGCGCAGTGCCTCCGCCTaGTTGCCCAGGCAGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSGALSLSSAVKEDGDVARSASA*LPRQSR Trigger: CCTGGACTGCCTGGGCAAGCAGGCGGAGGCACTGCG...CGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CAA 72 bp | CCTGCCAGAGCCTGGACAGCAACATACTGGCATCCCTaGCAGGCTTCCTGGGGAGCTGCAGGATGGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PARAWTATYWHP*QASWGAAGWAS Trigger: TGAGGCCCATCCTGCAGCTCCCCAGGAAGCCTGCAAGGGATGCCAGTATGTTGCTGTCCAGGCTCTGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGGGGACCTGACTACTGGGCAGGCCTTGGTGCTGTGCTGGCAATAGCCTCTCCCGAGATCTCTGCCTaGGGCACATCGCTCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TRGPDYWAGLGAVLAIASPEISA*GTSLRL Trigger: TAGCCTGAGCGATGTGCCTCAGGCAGAGATCTCGGG...AGAGGCTATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR TCA 90 bp | GGATATAGCAACTCAGCATCCCCTAGGCCCTGGAAGGGAAGATGGAGCCTTGACGGGGGTGCAGCTGCTTaGAGAGGCGCTCCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GYSNSASPRPWKGRWSLDGGAAA*RGAPAA Trigger: GGCTGCTGGAGCGCCTCTTCAAGCAGCTGCACCCCC...GTCAAGGCTCCATCTTCCCTTCCAGGGCCTAGGGGATGCTGAGTTGCTATATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGTAGCGCTCAGCTGTCCCTCCTGTTCTaGCAGGCCGGGGAGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: WCPEPLQCCQGRWRCSAQLSLLF*QAGEGM Trigger: CATGCCCTCCCCGGCCTGTCAGAACAGGAGGGACAG...CTGAGCGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAATTAAAAGCTAGGGTGACAGGCGTGGCCAGACCCAGGAGGCCAGGACCCTCCAAACGGCCGCAGTaGCTCCGCCTGCTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKLKARVTGVARPRRPGPSKRPQ*LRLLAQ Trigger: CTGGGCAAGCAGGCGGAGGCACTGCGGCCGTTTGGA...GGGTCCTGGCCTCCTGGGTCTGGCCACGCCTGTCACCCTAGCTTTTAATTTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTTCTGGGGGTGGTGCAGGAGGGTAGGGGAGGAGTGTGCAGCCAGAGGTGCAGCTCCATTCGGCTGTaGTTGGCCAAATTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELLGVVQEGRGGVCSQRCSSIRL*LAKFSS Trigger: GGAGGAGAATTTGGCCAACCACAGCCGAATGGAGCT...GCACCTCTGGCTGCACACTCCTCCCCTACCCTCCTGCACCACCCCCAGAAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGGGGACCTGACTACTGGGCAGGCCTTGGTGCTGTGCTGGCAATAGCCTCTGCATCCAGGTCGGCCTaGTTGGCAAGGCAGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRGPDYWAGLGAVLAIASASRSA*LARQPL Trigger: CAAAGGCTGCCTTGCCAACCAGGCCGACCTGGATGC...AGAGGCTATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTTCTGGGGGTGGTGCAGGAGGGTAGGGGAGGAGTGTGCAGCCAGAGGTGCGTAGGTACCGGCCCTTaGAAATTCCATTCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELLGVVQEGRGGVCSQRCVGTGP*KFHSSS Trigger: GCTGCTGGAATGGAATTTCCAAGGGCCGGTACCTAC...GCACCTCTGGCTGCACACTCCTCCCCTACCCTCCTGCACCACCCCCAGAAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CAA 72 bp | ATCTCAGAGCCCAGGTCTAGCTCCCAGTGCCCCTGCTaGAGTGGCACTAGCAGGGCTGTGGCTGGGTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISEPRSSSQCPC*SGTSRAVAGLS Trigger: ACTCAACCCAGCCACAGCCCTGCTAGTGCCACTCAAGCAGGGGCACTGGGAGCTAGACCTGGGCTCTGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCAATTTCTGACATCTGTGGCCCATGGGGTCTGGTAGGGAGTCCCCAGCGGCCGCAAGGACCAAGGTaGCGAGGAAGAGCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASISDICGPWGLVGSPQRPQGPR*RGRAGR Trigger: TCTTCCTGCTCTTCCTCGTCACCTTGGTCCTTGCGG...CCGCTGGGGACTCCCTACCAGACCCCATGGGCCACAGATGTCAGAAATTGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAATTAAAAGCTAGGGTGACAGGCGTGGCCAGACCCAGGAGGCCAGGACCCTCTGGCGGACTTCGCTaGAGCTCCGGCTCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKLKARVTGVARPRRPGPSGGLR*SSGSCW Trigger: CCAGCAAGAGCCGGAGCTGCAGCGAAGTCCGCCAGA...GGGTCCTGGCCTCCTGGGTCTGGCCACGCCTGTCACCCTAGCTTTTAATTTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | CCAGATTCCAAGTGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGCCATGCAGCTGGGTaGCCAGTGTGGCCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PDSKWCPEPLQCCQGRWRCHAAG*PVWPAG Trigger: CCCTGCAGGCCACACTGGCCACCCAGCTGCATGGCA...TCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGGAATCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGTGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGTAGCGTCGATGCCATGCAGCTaGGTGGCCAGTGTGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSGALSLSSAVKEDGDVASMPCS*VASVAC Trigger: GCAGGCCACACTGGCCACCCAGCTGCATGGCATCGA...CGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | GGATATAGCAACTCAGCATCCCCTAGGCCCTGGAAGGGAAGATGGAGCCTTGACCCACAAAGGCACGGGTaGCCCGCAGGCGCAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GYSNSASPRPWKGRWSLDPQRHG*PAGAVL Trigger: GAGAACTGCGCCTGCGGGCCACCCGTGCCTTTGTGG...GTCAAGGCTCCATCTTCCCTTCCAGGGCCTAGGGGATGCTGAGTTGCTATATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR GCA 90 bp | GGATATAGCAACTCAGCATCCCCTAGGCCCTGGAAGGGAAGATGGAGCCTTGACGTGCCTCCGCCTGCTTaGCCAGGCAGTCCAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GYSNSASPRPWKGRWSLDVPPPA*PGSPGS Trigger: ACTACCTGGACTGCCTGGGCAAGCAGGCGGAGGCAC...GTCAAGGCTCCATCTTCCCTTCCAGGGCCTAGGGGATGCTGAGTTGCTATATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | CCAGATTCCAAGTGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGAGGCCCGAGAACATTCTaGGGCCAGAGGTACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PDSKWCPEPLQCCQGRWRGPRTF*GQRYLG Trigger: GCCCAGGTACCTCTGGCCCCAGAATGTTCTCGGGCC...TCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGGAATCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR TCA 90 bp | CCAGATTCCAAGTGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGACAGAGCCGTGGGGATTaGCCTTGGGGTTTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PDSKWCPEPLQCCQGRWRQSRGD*PWGFHR Trigger: CCTGTGGAAACCCCAAGGTCAATCCCCACGGCTCTG...TCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGGAATCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGTGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGTAGCGCTGATCCAGAAGTCCTaGATGTCTCGGAGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSGALSLSSAVKEDGDVALIQKS*MSRSWA Trigger: GGCCCAGCTCCGAGACATTCAGGACTTCTGGATCAG...CGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CCA 90 bp | GTTGAGTGTGCTCAGGGCATGGGCCCAACAAACCCACAGACCAATTATGGAGAAGCGCGGCTGCTGTCATaGAGTGCGCTCTCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VECAQGMGPTNPQTNYGEARLLS*SALSSS Trigger: GGAGCTGGAGAGCGCACTCCATGACAGCAGCCGCGC...TTCTCCATAATTGGTCTGTGGGTTTGTTGGGCCCATGCCCTGAGCACACTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CCA 90 bp | ACAAAATTAAAAGCTAGGGTGACAGGCGTGGCCAGACCCAGGAGGCCAGGACCCTCAGGGTTGTTGATCTaGTTGGCCAGCCCGTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TKLKARVTGVARPRRPGPSGLLI*LASPSP Trigger: GGGTGACGGGCTGGCCAACCAGATCAACAACCCTGA...GGGTCCTGGCCTCCTGGGTCTGGCCACGCCTGTCACCCTAGCTTTTAATTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR GCA 90 bp | GGATATAGCAACTCAGCATCCCCTAGGCCCTGGAAGGGAAGATGGAGCCTTGACGGAAGTGGTCATCGATaGCATGCAGCTGGGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GYSNSASPRPWKGRWSLDGSGHR*HAAGWP Trigger: TGGCCACCCAGCTGCATGGCATCGATGACCACTTCC...GTCAAGGCTCCATCTTCCCTTCCAGGGCCTAGGGGATGCTGAGTTGCTATATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CCA 90 bp | TGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGTAGCGCTCAGCTCGGAGCTGGGCCTTaGCCTCAGAGACCAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WCPEPLQCCQGRWRCSAQLGAGP*PQRPVF Trigger: AAAAACTGGTCTCTGAGGCCAAGGCCCAGCTCCGAG...CTGAGCGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CCA 90 bp | GAGATAGATGTTCAATGGTTGCCACCACATGGAAACCCCAGGACTTTCCTACAGACCGCCACCTGGGCCTaGCTGCCGCAAGGACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EIDVQWLPPHGNPRTFLQTATWA*LPQGPR Trigger: CCTTGGTCCTTGCGGCAGCCAGGCCCAGGTGGCGGT...CTGTAGGAAAGTCCTGGGGTTTCCATGTGGTGGCAACCATTGAACATCTATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR TCA 90 bp | GAGATAGATGTTCAATGGTTGCCACCACATGGAAACCCCAGGACTTTCCTACAGTGTCCTGGAGGGCGTTaGTGGCCTCCGCCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: EIDVQWLPPHGNPRTFLQCPGGR*WPPPAT Trigger: TGTGGCTGGCGGAGGCCATCAACGCCCTCCAGGACA...CTGTAGGAAAGTCCTGGGGTTTCCATGTGGTGGCAACCATTGAACATCTATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR TCA 90 bp | GGATATAGCAACTCAGCATCCCCTAGGCCCTGGAAGGGAAGATGGAGCCTTGACGTGTCCCTGGGAGGCTaGTCCAGAAGTCCTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GYSNSASPRPWKGRWSLDVSLGG*SRSPEC Trigger: ACATTCAGGACTTCTGGATCAGCCTCCCAGGGACAC...GTCAAGGCTCCATCTTCCCTTCCAGGGCCTAGGGGATGCTGAGTTGCTATATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR GCA 90 bp | GCCTCAATTTCTGACATCTGTGGCCCATGGGGTCTGGTAGGGAGTCCCCAGCGGTTGAGCTGCATAATCTaGTGGCGGATGGTCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASISDICGPWGLVGSPQRLSCII*WRMVMS Trigger: AGACATGACCATCCGCCAGCAGATTATGCAGCTCAA...CCGCTGGGGACTCCCTACCAGACCCCATGGGCCACAGATGTCAGAAATTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGTGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGTAGCGCACTGGCAGGACTCATaGCCATCTTCTCACTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PSGALSLSSAVKEDGDVAHWQDS*PSSHCT Trigger: TGTGCAGTGAGAAGATGGCCATGAGTCCTGCCAGTG...CGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCCAGCACTCAGAGCTACTGTCTCCTTATCCTGCCCTGGACCTCAAAAGGCAGCTGCATAATCTGCTaGCGGATGGTCATGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPSTQSYCLLILPWTSKGSCIIC*RMVMSG Trigger: GCCAGACATGACCATCCGCCAGCAGATTATGCAGCT...GCCTTTTGAGGTCCAGGGCAGGATAAGGAGACAGTAGCTCTGAGTGCTGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAATTAAAAGCTAGGGTGACAGGCGTGGCCAGACCCAGGAGGCCAGGACCCAAGGCACGAGTGTTCTaGGTATACAGGTCCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKLKARVTGVARPRRPGPKARVF*VYRSPK Trigger: CTTTGGGGACCTGTATACGCAGAACACTCGTGCCTT...GGGTCCTGGCCTCCTGGGTCTGGCCACGCCTGTCACCCTAGCTTTTAATTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR GCA 90 bp | GATATAGCAACTCAGCATCCCCTAGGCCCTGGAAGGGAAGATGGAGCCTTGACACTGCACAAAGGAACGTaGAGCCACAAAGGCACGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DIATQHPLGPGREDGALTLHKGT*SHKGTG Trigger: ACCCGTGCCTTTGTGGCTGCACGTTCCTTTGTGCAG...TGTCAAGGCTCCATCTTCCCTTCCAGGGCCTAGGGGATGCTGAGTTGCTATATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAATTAAAAGCTAGGGTGACAGGCGTGGCCAGACCCAGGAGGCCAGGACCCCCATTCGGCTGTGGTTaGCCAAATTCTCCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TKLKARVTGVARPRRPGPPFGCG*PNSPPS Trigger: AGATGGAGGAGAATTTGGCCAACCACAGCCGAATGG...GGGTCCTGGCCTCCTGGGTCTGGCCACGCCTGTCACCCTAGCTTTTAATTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR TCA 90 bp | CCAGATTCCAAGTGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGGCAAGGCAGCCTTTaGGCACATTTCGGCAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: PDSKWCPEPLQCCQGRWRWQGSL*AHFGNS Trigger: ACTATTGCCGAAATGTGCTCAAAGGCTGCCTTGCCA...TCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGGAATCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | GTTGAGTGTGCTCAGGGCATGGGCCCAACAAACCCACAGACCAATTATGGAGAAACTGCACAGTGTCCCTaGGAGGCTGATCCAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VECAQGMGPTNPQTNYGETAQCP*EADPEV Trigger: GACTTCTGGATCAGCCTCCCAGGGACACTGTGCAGT...TTCTCCATAATTGGTCTGTGGGTTTGTTGGGCCCATGCCCTGAGCACACTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | GAGATAGATGTTCAATGGTTGCCACCACATGGAAACCCCAGGACTTTCCTACAGAGCAGGAAGAAGCTGTaGGGCTCTGGGCAGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EIDVQWLPPHGNPRTFLQSRKKL*GSGQVA Trigger: TGCCACCTGCCCAGAGCCCCACAGCTTCTTCCTGCT...CTGTAGGAAAGTCCTGGGGTTTCCATGTGGTGGCAACCATTGAACATCTATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | GAGATAGATGTTCAATGGTTGCCACCACATGGAAACCCCAGGACTTTCCTACAGGTGTCCTTGTTGTCCTaGAGGGCGTTGATGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EIDVQWLPPHGNPRTFLQVSLLS*RALMAS Trigger: GGAGGCCATCAACGCCCTCCAGGACAACAAGGACAC...CTGTAGGAAAGTCCTGGGGTTTCCATGTGGTGGCAACCATTGAACATCTATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CCA 90 bp | GTTGAGTGTGCTCAGGGCATGGGCCCAACAAACCCACAGACCAATTATGGAGAAGCGGATGGTCATGTCTaGCTTGGTGATGTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VECAQGMGPTNPQTNYGEADGHV*LGDVHF Trigger: GAAGTGGACATCACCAAGCCAGACATGACCATCCGC...TTCTCCATAATTGGTCTGTGGGTTTGTTGGGCCCATGCCCTGAGCACACTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CCA 90 bp | CCTCAAAAGGCCAAGGGAATTAAATATGGTCTGTTGCATGTTTTGGCCAAGACATCCGGACTACATCACTaGCCACACCCAGGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQKAKGIKYGLLHVLAKTSGLHH*PHPGPA Trigger: TGCAGGGCCTGGGTGTGGCCAGTGATGTAGTCCGGA...TGTCTTGGCCAAAACATGCAACAGACCATATTTAATTCCCTTGGCCTTTTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| 3UTR CAA 72 bp | TCAGTTGGCACAGACAGGTATCTTCCCAGGCAGGACTaGGAGATAGATGTTCAATGGTTGCCACCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVGTDRYLPRQD*EIDVQWLPPHG Trigger: TCCATGTGGTGGCAACCATTGAACATCTATCTCCAAGTCCTGCCTGGGAAGATACCTGTCTGTGCCAACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR GCA 90 bp | CCTCAAAAGGCCAAGGGAATTAAATATGGTCTGTTGCATGTTTTGGCCAAGACAGTGGAGGGCTTCTCCTaGAGTGCCAATTTGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PQKAKGIKYGLLHVLAKTVEGFS*SANLPR Trigger: CCGTGGCAAATTGGCACTGCAGGAGAAGCCCTCCAC...TGTCTTGGCCAAAACATGCAACAGACCATATTTAATTCCCTTGGCCTTTTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR GCA 90 bp | CCTCAAAAGGCCAAGGGAATTAAATATGGTCTGTTGCATGTTTTGGCCAAGACAGTCATGATCTTGAGCTaGATAATCTGCTGGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PQKAKGIKYGLLHVLAKTVMILS*IICWRM Trigger: CATCCGCCAGCAGATTATGCAGCTCAAGATCATGAC...TGTCTTGGCCAAAACATGCAACAGACCATATTTAATTCCCTTGGCCTTTTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| 3UTR CAA 72 bp | GAGAACTTTTCTATGGCTAAGACAATGGCATGTAGATaGAGGTGTGTTAAAGAGGTGGAAGGCTGGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ENFSMAKTMACR*RCVKEVEGWWN Trigger: GTTCCACCAGCCTTCCACCTCTTTAACACACCTCAATCTACATGCCATTGTCTTAGCCATAGAAAAGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS TCA 90 bp | TCCTCCACTCGGCATCCAGGTCGGCCTGGTTGGCAAGGCAGCCTTTaGGCACATTTCGGCAATAGTCGGGGCAGGGCCGGGCGCCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSTRHPGRPGWQGSL*AHFGNSRGRAGRPG Trigger: TCCCGGGCGCCCGGCCCTGCCCCGACTATTGCCGAAATGTGCTCAAAGGCTGCCTTGCCAACCAGGCCGACCTGGATGCCGAGTGGAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS GCA 90 bp | ACCTGGGCCACCTTCCGGACTACATCACTGGCCACACCCAGGCCCTaGACAAAGGAACGTGCAGCCACAAAGGCACGGGTGGCCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TWATFRTTSLATPRP*TKERAATKARVARR Trigger: CCTGCGGGCCACCCGTGCCTTTGTGGCTGCACGTTCCTTTGTGCAGGGCCTGGGTGTGGCCAGTGATGTAGTCCGGAAGGTGGCCCAGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS GCA 90 bp | TCCTTGTTGTCCTGGAGGGCGTTGATGGCCTCCGCCAGCCACACGTaGACACCGCCAATGACACTCTCCGCACCCGACGGGCCCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLLSWRALMASASHT*TPPMTLSAPDGPQN Trigger: GTTCTGGGGCCCGTCGGGTGCGGAGAGTGTCATTGGCGGTGTGCACGTGTGGCTGGCGGAGGCCATCAACGCCCTCCAGGACAACAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 90 bp | GCAGCCGTGCCCAGAACTCGGCCAGCGTCTCCTCAAGGTGCAGGTTaGCCCCACGGTAGTAGAGGCGCAGCTCAGCATATAGGTCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: AAVPRTRPASPQGAG*PHGSRGAAQHIGPG Trigger: TCCGGGACCTATATGCTGAGCTGCGCCTCTACTACCGTGGGGCCAACCTGCACCTTGAGGAGACGCTGGCCGAGTTCTGGGCACGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 90 bp | GGAGCTGGAACTCTTCTTGCTGACCCTCCGGCCACAGGTGTCATCTaGGCATCCGCCACCGCTGCCGGAGCCACTGCCGTCATCACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GAGTLLADPPATGVI*ASATAAGATAVITS Trigger: GCTAGTGATGACGGCAGTGGCTCCGGCAGCGGTGGCGGATGCCCAGATGACACCTGTGGCCGGAGGGTCAGCAAGAAGAGTTCCAGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CAA 90 bp | CCAGATTCCAAGTGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGACTGCAGCTCCGGCTCTaGCTGGCGGGGTCCCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PDSKWCPEPLQCCQGRWRLQLRL*LAGSPR Trigger: CCGCGGGGACCCCGCCAGCAAGAGCCGGAGCTGCAG...TCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGGAATCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS TCA 90 bp | GGGCGCCCGGGACTCCCCGGCAATGAGCACAGTAGACCAACTTCATaGTGGCCCGAGAACATTCTGGGGCCAGAGGTACCTGGGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: GRPGLPGNEHSRPTS*WPENILGPEVPGPP Trigger: AGGTGGCCCAGGTACCTCTGGCCCCAGAATGTTCTCGGGCCATCATGAAGTTGGTCTACTGTGCTCATTGCCGGGGAGTCCCGGGCGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS GCA 90 bp | TGGAAGTGGTCATCGATGCCATGCAGCTGGGTGGCCAGTGTGGCCTaGAGGGCGCGGCTGCTGTCATGGAGTGCGCTCTCCAGCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: WKWSSMPCSWVASVA*RARLLSWSALSSSI Trigger: AATGGAGCTGGAGAGCGCACTCCATGACAGCAGCCGCGCCCTGCAGGCCACACTGGCCACCCAGCTGCATGGCATCGATGACCACTTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 90 bp | GGGAAAGCCTCCTGCAGTGTGCGCTCCGAGTCATTCAGCAGGCGCTaGAAGTGGTCATCGATGCCATGCAGCTGGGTGGCCAGTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GKASCSVRSESFSRR*KWSSMPCSWVASVA Trigger: GGCCACACTGGCCACCCAGCTGCATGGCATCGATGACCACTTCCAGCGCCTGCTGAATGACTCGGAGCGCACACTGCAGGAGGCTTTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 90 bp | GCTGAGGTCTTCTGTCCCTCCTGTTCTGACAGGCCGGGGAGGGCATaGGTCAAGGGGGTCCGGGAGCTGGAACTCTTCTTGCTGACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AEVFCPSCSDRPGRA*VKGVRELELFLLTL Trigger: GAGGGTCAGCAAGAAGAGTTCCAGCTCCCGGACCCCCTTGACCCATGCCCTCCCCGGCCTGTCAGAACAGGAGGGACAGAAGACCTCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CAA 90 bp | GAGCTTCTGGGGGTGGTGCAGGAGGGTAGGGGAGGAGTGTGCAGCCAGAGGTGCGACGGGCCCCAGAACTaGTCAGTGATGAGCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: ELLGVVQEGRGGVCSQRCDGPQN*SVMSTM Trigger: CATGGTGCTCATCACTGACAAGTTCTGGGGCCCGTC...GCACCTCTGGCTGCACACTCCTCCCCTACCCTCCTGCACCACCCCCAGAAGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CAA 90 bp | GAGCTTCTGGGGGTGGTGCAGGAGGGTAGGGGAGGAGTGTGCAGCCAGAGGTGCTCTCGGAGCTGGGCCTaGGCCTCAGAGACCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ELLGVVQEGRGGVCSQRCSRSWA*ASETSF Trigger: AAAACTGGTCTCTGAGGCCAAGGCCCAGCTCCGAGA...GCACCTCTGGCTGCACACTCCTCCCCTACCCTCCTGCACCACCCCCAGAAGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 90 bp | CCACAGGCCTGGATGACCTTAGCTGTGAGTGTGTCCTTGTTGTCCTaGAGGGCGTTGATGGCCTCCGCCAGCCACACGTGCACACCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PQAWMTLAVSVSLLS*RALMASASHTCTPP Trigger: TGGCGGTGTGCACGTGTGGCTGGCGGAGGCCATCAACGCCCTCCAGGACAACAAGGACACACTCACAGCTAAGGTCATCCAGGCCTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCAATTTCTGACATCTGTGGCCCATGGGGTCTGGTAGGGAGTCCCCAGCGGTCCAGGTCGGCCTGGTaGGCAAGGCAGCCTTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASISDICGPWGLVGSPQRSRSAW*ARQPLS Trigger: GCTCAAAGGCTGCCTTGCCAACCAGGCCGACCTGGA...CCGCTGGGGACTCCCTACCAGACCCCATGGGCCACAGATGTCAGAAATTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 90 bp | ACCAACTTCATGATGGCCCGAGAACATTCTGGGGCCAGAGGTACCTaGGCCACCTTCCGGACTACATCACTGGCCACACCCAGGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TNFMMAREHSGARGT*ATFRTTSLATPRPC Trigger: GCAGGGCCTGGGTGTGGCCAGTGATGTAGTCCGGAAGGTGGCCCAGGTACCTCTGGCCCCAGAATGTTCTCGGGCCATCATGAAGTTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS CCA 90 bp | AGTGCCAATTTGCCACGGCGACGCTTCTCCTCGGGCCCAGAGCCGTaGGGATTGACCTTGGGGTTTCCACAGGCCTGGATGACCTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SANLPRRRFSSGPEP*GLTLGFPQAWMTLA Trigger: AGCTAAGGTCATCCAGGCCTGTGGAAACCCCAAGGTCAATCCCCACGGCTCTGGGCCCGAGGAGAAGCGTCGCCGTGGCAAATTGGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS GCA 90 bp | AGAGACCAGTTTTTCCAGAGTACCTGTGGAGGGCTTCTCCTGCAGTaGCAATTTGCCACGGCGACGCTTCTCCTCGGGCCCAGAGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RDQFFQSTCGGLLLQ*QFATATLLLGPRAV Trigger: CACGGCTCTGGGCCCGAGGAGAAGCGTCGCCGTGGCAAATTGGCACTGCAGGAGAAGCCCTCCACAGGTACTCTGGAAAAACTGGTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS GCA 90 bp | GCCTCAGAGACCAGTTTTTCCAGAGTACCTGTGGAGGGCTTCTCCTaGAGTGCCAATTTGCCACGGCGACGCTTCTCCTCGGGCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASETSFSRVPVEGFS*SANLPRRRFSSGPE Trigger: CTCTGGGCCCGAGGAGAAGCGTCGCCGTGGCAAATTGGCACTGCAGGAGAAGCCCTCCACAGGTACTCTGGAAAAACTGGTCTCTGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATTCCAAGTGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGGGGGTGCAGCTGCTaGAAGAGGCGCTCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PDSKWCPEPLQCCQGRWRWGCSC*KRRSSS Trigger: GCTGCTGGAGCGCCTCTTCAAGCAGCTGCACCCCCA...TCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCACTTGGAATCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGACCTGACTACTGGGCAGGCCTTGGTGCTGTGCTGGCAATAGCCTCTCTAGAGCTGGAACTCTTCTaGCTGACCCTCCGGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RGPDYWAGLGAVLAIASLELELF*LTLRPQ Trigger: CTGTGGCCGGAGGGTCAGCAAGAAGAGTTCCAGCTC...TAGAGAGGCTATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS TCA 90 bp | CAGGACTCATGGCCATCTTCTCACTGCACAGTGTCCCTGGGAGGCTaGTCCAGAAGTCCTGAATGTCTCGGAGCTGGGCCTTGGCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QDSWPSSHCTVSLGG*SRSPECLGAGPWPQ Trigger: CTGAGGCCAAGGCCCAGCTCCGAGACATTCAGGACTTCTGGATCAGCCTCCCAGGGACACTGTGCAGTGAGAAGATGGCCATGAGTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
||
| CDS CCA 90 bp | GGAGCTGGGCCTTGGCCTCAGAGACCAGTTTTTCCAGAGTACCTGTaGAGGGCTTCTCCTGCAGTGCCAATTTGCCACGGCGACGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GAGPWPQRPVFPEYL*RASPAVPICHGDAS Trigger: AGAAGCGTCGCCGTGGCAAATTGGCACTGCAGGAGAAGCCCTCCACAGGTACTCTGGAAAAACTGGTCTCTGAGGCCAAGGCCCAGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CAA 90 bp | ACAAAATTAAAAGCTAGGGTGACAGGCGTGGCCAGACCCAGGAGGCCAGGACCCCCAGAGCCGTGGGGATaGACCTTGGGGTTTCCACAG | + |
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Preference number: 5 (lower is better) Translates to: TKLKARVTGVARPRRPGPPEPWG*TLGFPQ Trigger: CTGTGGAAACCCCAAGGTCAATCCCCACGGCTCTGG...GGGTCCTGGCCTCCTGGGTCTGGCCACGCCTGTCACCCTAGCTTTTAATTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CAA 90 bp | TGGTGCCCTGAGCCTCTCCAGTGCTGTCAAGGAAGATGGAGATGTAGCGCTCAGGGGTTGTTGATCTGGTaGGCCAGCCCGTCACCCATC | + |
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Preference number: 5 (lower is better) Translates to: WCPEPLQCCQGRWRCSAQGLLIW*ASPSPI Trigger: GATGGGTGACGGGCTGGCCAACCAGATCAACAACCC...CTGAGCGCTACATCTCCATCTTCCTTGACAGCACTGGAGAGGCTCAGGGCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 90 bp | GTCACTGGCAGGACTCATGGCCATCTTCTCACTGCACAGTGTCCCTaGGAGGCTGATCCAGAAGTCCTGAATGTCTCGGAGCTGGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: VTGRTHGHLLTAQCP*EADPEVLNVSELGL Trigger: AAGGCCCAGCTCCGAGACATTCAGGACTTCTGGATCAGCCTCCCAGGGACACTGTGCAGTGAGAAGATGGCCATGAGTCCTGCCAGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 90 bp | GTAGGTACCGGCCCTTGGAAATTCCATTCCAGCAGCGGTCGTCACTaGCAGGACTCATGGCCATCTTCTCACTGCACAGTGTCCCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VGTGPWKFHSSSGRH*QDSWPSSHCTVSLG Trigger: TCCCAGGGACACTGTGCAGTGAGAAGATGGCCATGAGTCCTGCCAGTGACGACCGCTGCTGGAATGGAATTTCCAAGGGCCGGTACCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CAA 90 bp | TGCCCCAGCACTCAGAGCTACTGTCTCCTTATCCTGCCCTGGACCTCAAAAGGCGCTGTGAGTGTGTCCTaGTTGTCCTGGAGGGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: CPSTQSYCLLILPWTSKGAVSVS*LSWRAL Trigger: CAACGCCCTCCAGGACAACAAGGACACACTCACAGC...GCCTTTTGAGGTCCAGGGCAGGATAAGGAGACAGTAGCTCTGAGTGCTGGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 90 bp | GCAATGAGCACAGTAGACCAACTTCATGATGGCCCGAGAACATTCTaGGGCCAGAGGTACCTGGGCCACCTTCCGGACTACATCACTGGC | + |
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Preference number: 5 (lower is better) Translates to: AMSTVDQLHDGPRTF*GQRYLGHLPDYITG Trigger: GCCAGTGATGTAGTCCGGAAGGTGGCCCAGGTACCTCTGGCCCCAGAATGTTCTCGGGCCATCATGAAGTTGGTCTACTGTGCTCATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CAA 90 bp | TGCCCCAGCACTCAGAGCTACTGTCTCCTTATCCTGCCCTGGACCTCAAAAGGCGCGCCACGTAAACGGTaGGTCATGATCTTGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: CPSTQSYCLLILPWTSKGAPRKR*VMILSC Trigger: GCAGCTCAAGATCATGACCAACCGTTTACGTGGCGC...GCCTTTTGAGGTCCAGGGCAGGATAAGGAGACAGTAGCTCTGAGTGCTGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS TCA 90 bp | ATCTTCTCACTGCACAGTGTCCCTGGGAGGCTGATCCAGAAGTCCTaGATGTCTCGGAGCTGGGCCTTGGCCTCAGAGACCAGTTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: IFSLHSVPGRLIQKS*MSRSWALASETSFS Trigger: GGAAAAACTGGTCTCTGAGGCCAAGGCCCAGCTCCGAGACATTCAGGACTTCTGGATCAGCCTCCCAGGGACACTGTGCAGTGAGAAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CAA 90 bp | GAGATAGATGTTCAATGGTTGCCACCACATGGAAACCCCAGGACTTTCCTACAGTTGTCCTGGAGGGCGTaGATGGCCTCCGCCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: EIDVQWLPPHGNPRTFLQLSWRA*MASASH Trigger: GTGGCTGGCGGAGGCCATCAACGCCCTCCAGGACAA...CTGTAGGAAAGTCCTGGGGTTTCCATGTGGTGGCAACCATTGAACATCTATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CAA 90 bp | GGATATAGCAACTCAGCATCCCCTAGGCCCTGGAAGGGAAGATGGAGCCTTGACGTGAGTGTGTCCTTGTaGTCCTGGAGGGCGTTGATG | + |
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Preference number: 5 (lower is better) Translates to: GYSNSASPRPWKGRWSLDVSVSL*SWRALM Trigger: CATCAACGCCCTCCAGGACAACAAGGACACACTCAC...GTCAAGGCTCCATCTTCCCTTCCAGGGCCTAGGGGATGCTGAGTTGCTATATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CAA 90 bp | AGGGGACCTGACTACTGGGCAGGCCTTGGTGCTGTGCTGGCAATAGCCTCTCTACGGTTGGTCATGATCTaGAGCTGCATAATCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: RGPDYWAGLGAVLAIASLRLVMI*SCIICW Trigger: CCAGCAGATTATGCAGCTCAAGATCATGACCAACCG...TAGAGAGGCTATTGCCAGCACAGCACCAAGGCCTGCCCAGTAGTCAGGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS-3UTR CAA 90 bp | CCTCAAAAGGCCAAGGGAATTAAATATGGTCTGTTGCATGTTTTGGCCAAGACATCCATTCGGCTGTGGTaGGCCAAATTCTCCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: PQKAKGIKYGLLHVLAKTSIRLW*AKFSSI Trigger: GATGGAGGAGAATTTGGCCAACCACAGCCGAATGGA...TGTCTTGGCCAAAACATGCAACAGACCATATTTAATTCCCTTGGCCTTTTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS GCA 72 bp | CGTAGATCTGGCGGACTTCGCTGCAGCTCCGGCTCTTaGTGGCGGGGTCCCCGCGGGCGCAGACGACCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RRSGGLRCSSGS*WRGPRGRRRPA Trigger: CGCTGGTCGTCTGCGCCCGCGGGGACCCCGCCAGCAAGAGCCGGAGCTGCAGCGAAGTCCGCCAGATCTACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS GCA 72 bp | TCCTGGAGGGCGTTGATGGCCTCCGCCAGCCACACGTaGACACCGCCAATGACACTCTCCGCACCCGACGGG | + |
|
Preference number: 6 (lower is better) Translates to: SWRALMASASHT*TPPMTLSAPDG Trigger: CCCGTCGGGTGCGGAGAGTGTCATTGGCGGTGTGCACGTGTGGCTGGCGGAGGCCATCAACGCCCTCCAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS GCA 72 bp | TCATCGATGCCATGCAGCTGGGTGGCCAGTGTGGCCTaGAGGGCGCGGCTGCTGTCATGGAGTGCGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSMPCSWVASVA*RARLLSWSALS Trigger: GGAGAGCGCACTCCATGACAGCAGCCGCGCCCTGCAGGCCACACTGGCCACCCAGCTGCATGGCATCGATGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 72 bp | GTGGCCAGTGTGGCCTGCAGGGCGCGGCTGCTGTCATaGAGTGCGCTCTCCAGCTCCATTCGGCTGTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VASVACRARLLS*SALSSSIRLWL Trigger: CAACCACAGCCGAATGGAGCTGGAGAGCGCACTCCATGACAGCAGCCGCGCCCTGCAGGCCACACTGGCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS TCA 72 bp | GGTAGTCATCAGGCAGCAGCTGGGGGTGCAGCTGCTTaGAGAGGCGCTCCAGCAGCCGTGCCCAGAACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSHQAAAGGAAA*RGAPAAVPRTR Trigger: CCGAGTTCTGGGCACGGCTGCTGGAGCGCCTCTTCAAGCAGCTGCACCCCCAGCTGCTGCCTGATGACTACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS TCA 72 bp | CGGCATCCAGGTCGGCCTGGTTGGCAAGGCAGCCTTTaGGCACATTTCGGCAATAGTCGGGGCAGGGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RHPGRPGWQGSL*AHFGNSRGRAG Trigger: CCCGGCCCTGCCCCGACTATTGCCGAAATGTGCTCAAAGGCTGCCTTGCCAACCAGGCCGACCTGGATGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS GCA 72 bp | GGGCATCTCCAAACGGCCGCAGTGCCTCCGCCTGCTTaGCCAGGCAGTCCAGGTAGTCATCAGGCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GHLQTAAVPPPA*PGSPGSHQAAA Trigger: AGCTGCTGCCTGATGACTACCTGGACTGCCTGGGCAAGCAGGCGGAGGCACTGCGGCCGTTTGGAGATGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 72 bp | TTGCCACGGCGACGCTTCTCCTCGGGCCCAGAGCCGTaGGGATTGACCTTGGGGTTTCCACAGGCCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LPRRRFSSGPEP*GLTLGFPQAWM Trigger: CATCCAGGCCTGTGGAAACCCCAAGGTCAATCCCCACGGCTCTGGGCCCGAGGAGAAGCGTCGCCGTGGCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS TCA 72 bp | GGGCAGATCCGCAGGTGCTCACCCGAGATCTCTGCCTaGGGCACATCGCTCAGGCTAAAGCCCTTAGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GQIRRCSPEISA*GTSLRLKPLAP Trigger: CGGGGCTAAGGGCTTTAGCCTGAGCGATGTGCCTCAGGCAGAGATCTCGGGTGAGCACCTGCGGATCTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS GCA 72 bp | GAGTACCTGTGGAGGGCTTCTCCTGCAGTGCCAATTTaGCACGGCGACGCTTCTCCTCGGGCCCAGAGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: EYLWRASPAVPI*HGDASPRAQSR Trigger: ACGGCTCTGGGCCCGAGGAGAAGCGTCGCCGTGGCAAATTGGCACTGCAGGAGAAGCCCTCCACAGGTACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 72 bp | CCTGCACAAAGGAACGTGCAGCCACAAAGGCACGGGTaGCCCGCAGGCGCAGTTCTCGAGGGGCATCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PAQRNVQPQRHG*PAGAVLEGHLQ Trigger: TTGGAGATGCCCCTCGAGAACTGCGCCTGCGGGCCACCCGTGCCTTTGTGGCTGCACGTTCCTTTGTGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CAA 72 bp | CGGCGACGCTTCTCCTCGGGCCCAGAGCCGTGGGGATaGACCTTGGGGTTTCCACAGGCCTGGATGACCTTA | + |
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Preference number: 6 (lower is better) Translates to: RRRFSSGPEPWG*TLGFPQAWMTL Trigger: TAAGGTCATCCAGGCCTGTGGAAACCCCAAGGTCAATCCCCACGGCTCTGGGCCCGAGGAGAAGCGTCGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CAA 90 bp | CCACGGCGACGCTTCTCCTCGGGCCCAGAGCCGTGGGGATTGACCTaGGGGTTTCCACAGGCCTGGATGACCTTAGCTGTGAGTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PRRRFSSGPEPWGLT*GFPQAWMTLAVSVS Trigger: GGACACACTCACAGCTAAGGTCATCCAGGCCTGTGGAAACCCCAAGGTCAATCCCCACGGCTCTGGGCCCGAGGAGAAGCGTCGCCGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 72 bp | TCCTGCAGTGTGCGCTCCGAGTCATTCAGCAGGCGCTaGAAGTGGTCATCGATGCCATGCAGCTGGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SCSVRSESFSRR*KWSSMPCSWVA Trigger: GGCCACCCAGCTGCATGGCATCGATGACCACTTCCAGCGCCTGCTGAATGACTCGGAGCGCACACTGCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 72 bp | CCAGAGGTACCTGGGCCACCTTCCGGACTACATCACTaGCCACACCCAGGCCCTGCACAAAGGAACGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PEVPGPPSGLHH*PHPGPAQRNVQ Trigger: CTGCACGTTCCTTTGTGCAGGGCCTGGGTGTGGCCAGTGATGTAGTCCGGAAGGTGGCCCAGGTACCTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 72 bp | TTCTGTCCCTCCTGTTCTGACAGGCCGGGGAGGGCATaGGTCAAGGGGGTCCGGGAGCTGGAACTCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FCPSCSDRPGRA*VKGVRELELFL Trigger: CAAGAAGAGTTCCAGCTCCCGGACCCCCTTGACCCATGCCCTCCCCGGCCTGTCAGAACAGGAGGGACAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CAA 72 bp | CGCTTCTCCTCGGGCCCAGAGCCGTGGGGATTGACCTaGGGGTTTCCACAGGCCTGGATGACCTTAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RFSSGPEPWGLT*GFPQAWMTLAV Trigger: CACAGCTAAGGTCATCCAGGCCTGTGGAAACCCCAAGGTCAATCCCCACGGCTCTGGGCCCGAGGAGAAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS TCA 72 bp | CTGCACAGTGTCCCTGGGAGGCTGATCCAGAAGTCCTaGATGTCTCGGAGCTGGGCCTTGGCCTCAGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: LHSVPGRLIQKS*MSRSWALASET Trigger: GGTCTCTGAGGCCAAGGCCCAGCTCCGAGACATTCAGGACTTCTGGATCAGCCTCCCAGGGACACTGTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS GCA 72 bp | ACCTTCCGGACTACATCACTGGCCACACCCAGGCCCTaGACAAAGGAACGTGCAGCCACAAAGGCACGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TFRTTSLATPRP*TKERAATKARV Trigger: CACCCGTGCCTTTGTGGCTGCACGTTCCTTTGTGCAGGGCCTGGGTGTGGCCAGTGATGTAGTCCGGAAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 72 bp | ATGATGGCCCGAGAACATTCTGGGGCCAGAGGTACCTaGGCCACCTTCCGGACTACATCACTGGCCACACCC | + |
|
Preference number: 6 (lower is better) Translates to: MMAREHSGARGT*ATFRTTSLATP Trigger: GGGTGTGGCCAGTGATGTAGTCCGGAAGGTGGCCCAGGTACCTCTGGCCCCAGAATGTTCTCGGGCCATCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CAA 72 bp | CAGGCCTGGATGACCTTAGCTGTGAGTGTGTCCTTGTaGTCCTGGAGGGCGTTGATGGCCTCCGCCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QAWMTLAVSVSL*SWRALMASASH Trigger: GTGGCTGGCGGAGGCCATCAACGCCCTCCAGGACAACAAGGACACACTCACAGCTAAGGTCATCCAGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CAA 72 bp | CCACAGGCCTGGATGACCTTAGCTGTGAGTGTGTCCTaGTTGTCCTGGAGGGCGTTGATGGCCTCCGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PQAWMTLAVSVS*LSWRALMASAS Trigger: GCTGGCGGAGGCCATCAACGCCCTCCAGGACAACAAGGACACACTCACAGCTAAGGTCATCCAGGCCTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CAA 90 bp | GGGTTTCCACAGGCCTGGATGACCTTAGCTGTGAGTGTGTCCTTGTaGTCCTGGAGGGCGTTGATGGCCTCCGCCAGCCACACGTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: GFPQAWMTLAVSVSL*SWRALMASASHTCT Trigger: TGTGCACGTGTGGCTGGCGGAGGCCATCAACGCCCTCCAGGACAACAAGGACACACTCACAGCTAAGGTCATCCAGGCCTGTGGAAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CAA 90 bp | TTGGGGTTTCCACAGGCCTGGATGACCTTAGCTGTGAGTGTGTCCTaGTTGTCCTGGAGGGCGTTGATGGCCTCCGCCAGCCACACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGFPQAWMTLAVSVS*LSWRALMASASHTC Trigger: GCACGTGTGGCTGGCGGAGGCCATCAACGCCCTCCAGGACAACAAGGACACACTCACAGCTAAGGTCATCCAGGCCTGTGGAAACCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CAA 90 bp | AATTTGCCACGGCGACGCTTCTCCTCGGGCCCAGAGCCGTGGGGATaGACCTTGGGGTTTCCACAGGCCTGGATGACCTTAGCTGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: NLPRRRFSSGPEPWG*TLGFPQAWMTLAVS Trigger: ACTCACAGCTAAGGTCATCCAGGCCTGTGGAAACCCCAAGGTCAATCCCCACGGCTCTGGGCCCGAGGAGAAGCGTCGCCGTGGCAAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS GCA 72 bp | TTTTTCCAGAGTACCTGTGGAGGGCTTCTCCTGCAGTaGCAATTTGCCACGGCGACGCTTCTCCTCGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FFQSTCGGLLLQ*QFATATLLLGP Trigger: GGGCCCGAGGAGAAGCGTCGCCGTGGCAAATTGGCACTGCAGGAGAAGCCCTCCACAGGTACTCTGGAAAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 72 bp | TGGATGACCTTAGCTGTGAGTGTGTCCTTGTTGTCCTaGAGGGCGTTGATGGCCTCCGCCAGCCACACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: WMTLAVSVSLLS*RALMASASHTC Trigger: GCACGTGTGGCTGGCGGAGGCCATCAACGCCCTCCAGGACAACAAGGACACACTCACAGCTAAGGTCATCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CAA 90 bp | TGGATGACCTTAGCTGTGAGTGTGTCCTTGTTGTCCTGGAGGGCGTaGATGGCCTCCGCCAGCCACACGTGCACACCGCCAATGACACTC | + |
|
Preference number: 6 (lower is better) Translates to: WMTLAVSVSLLSWRA*MASASHTCTPPMTL Trigger: GAGTGTCATTGGCGGTGTGCACGTGTGGCTGGCGGAGGCCATCAACGCCCTCCAGGACAACAAGGACACACTCACAGCTAAGGTCATCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS TCA 72 bp | TGGCCATCTTCTCACTGCACAGTGTCCCTGGGAGGCTaGTCCAGAAGTCCTGAATGTCTCGGAGCTGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: WPSSHCTVSLGG*SRSPECLGAGP Trigger: AGGCCCAGCTCCGAGACATTCAGGACTTCTGGATCAGCCTCCCAGGGACACTGTGCAGTGAGAAGATGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS TCA 72 bp | GGACTCCCCGGCAATGAGCACAGTAGACCAACTTCATaGTGGCCCGAGAACATTCTGGGGCCAGAGGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: GLPGNEHSRPTS*WPENILGPEVP Trigger: AGGTACCTCTGGCCCCAGAATGTTCTCGGGCCATCATGAAGTTGGTCTACTGTGCTCATTGCCGGGGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS GCA 72 bp | ACCAGTTTTTCCAGAGTACCTGTGGAGGGCTTCTCCTaGAGTGCCAATTTGCCACGGCGACGCTTCTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: TSFSRVPVEGFS*SANLPRRRFSS Trigger: CGAGGAGAAGCGTCGCCGTGGCAAATTGGCACTGCAGGAGAAGCCCTCCACAGGTACTCTGGAAAAACTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 72 bp | ACAGTAGACCAACTTCATGATGGCCCGAGAACATTCTaGGGCCAGAGGTACCTGGGCCACCTTCCGGACTAC | + |
|
Preference number: 6 (lower is better) Translates to: TVDQLHDGPRTF*GQRYLGHLPDY Trigger: GTAGTCCGGAAGGTGGCCCAGGTACCTCTGGCCCCAGAATGTTCTCGGGCCATCATGAAGTTGGTCTACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 72 bp | GGCCCTTGGAAATTCCATTCCAGCAGCGGTCGTCACTaGCAGGACTCATGGCCATCTTCTCACTGCACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GPWKFHSSSGRH*QDSWPSSHCTV Trigger: CACTGTGCAGTGAGAAGATGGCCATGAGTCCTGCCAGTGACGACCGCTGCTGGAATGGAATTTCCAAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 72 bp | AGGACTCATGGCCATCTTCTCACTGCACAGTGTCCCTaGGAGGCTGATCCAGAAGTCCTGAATGTCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RTHGHLLTAQCP*EADPEVLNVSE Trigger: CTCCGAGACATTCAGGACTTCTGGATCAGCCTCCCAGGGACACTGTGCAGTGAGAAGATGGCCATGAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 72 bp | CTGTCATGGAGTGCGCTCTCCAGCTCCATTCGGCTGTaGTTGGCCAAATTCTCCTCCATCTCACTAGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: LSWSALSSSIRL*LAKFSSISLVQ Trigger: CTGTACTAGTGAGATGGAGGAGAATTTGGCCAACCACAGCCGAATGGAGCTGGAGAGCGCACTCCATGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CAA 72 bp | TCATGGAGTGCGCTCTCCAGCTCCATTCGGCTGTGGTaGGCCAAATTCTCCTCCATCTCACTAGTACAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SWSALSSSIRLW*AKFSSISLVQQ Trigger: TTGCTGTACTAGTGAGATGGAGGAGAATTTGGCCAACCACAGCCGAATGGAGCTGGAGAGCGCACTCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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| CDS CCA 72 bp | AAACGGTTGGTCATGATCTTGAGCTGCATAATCTGCTaGCGGATGGTCATGTCTGGCTTGGTGATGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: KRLVMILSCIIC*RMVMSGLVMST Trigger: AGTGGACATCACCAAGCCAGACATGACCATCCGCCAGCAGATTATGCAGCTCAAGATCATGACCAACCGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045970.8 |
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