Pregenerated sensors for GPBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032745Ensembl transcript IDs: ENSMUST00000047627.14, ENSMUST00000091236.11, ENSMUST00000136471.9
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGATCTGACAGCACACCGAACAAAGCTCCTGACAAGCCCCTCCTaGAGCTTGGAAGAGCGCCTGGCATGTCTCCTCTCCCACATTCAC | + |
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Preference number: 1 (lower is better) Translates to: PDLTAHRTKLLTSPS*SLEERLACLLSHIH Trigger: GTGAATGTGGGAGAGGAGACATGCCAGGCGCTCTTCCAAGCTTCAGGAGGGGCTTGTCAGGAGCTTTGTTCGGTGTGCTGTCAGATCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| 3UTR TCA 90 bp | GTGAACTGGAAAGAACATCAGTTTGTGGAAAAGTCGAAGAACGAATaGTCTGTTGAGAAATCATCGAGGCATTGCCGTTCTCCTGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: VNWKEHQFVEKSKNE*SVEKSSRHCRSPVE Trigger: TTCCACAGGAGAACGGCAATGCCTCGATGATTTCTCAACAGATCATTCGTTCTTCGACTTTTCCACAAACTGATGTTCTTTCCAGTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR GCA 90 bp | AGAAAATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATaGTGCAGTGATGAAGAAAGTCAATGTTGGATCAACCAAAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: RKSHLLHRHIASQEK*CSDEESQCWINQSP Trigger: AGGACTTTGGTTGATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 ENSMUST00000136471.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGTGAGGATCTCCTTCACACATCGTCATCATCCGACGTGTCGCTGCTACTTGTCCAGGGTCCAAACTTaGAGTCACAGATCAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: AVRISFTHRHHPTCRCYLSRVQT*SHRSGH Trigger: ATGGCCTGATCTGTGACTTCAAGTTTGGACCCTGGA...CAAGTAGCAGCGACACGTCGGATGATGACGATGTGTGAAGGAGATCCTCACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGTGAGGATCTCCTTCACACATCGTCATCATCCGACGTGTCGCTGCTACTTGTTCTCTGAGCCAGCATaGCTTTCATCTTCATGTTCC | + |
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Preference number: 2 (lower is better) Translates to: AVRISFTHRHHPTCRCYLFSEPA*LSSSCS Trigger: GGAACATGAAGATGAAAGTCATGCTGGCTCAGAGAA...CAAGTAGCAGCGACACGTCGGATGATGACGATGTGTGAAGGAGATCCTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGTGAGGATCTCCTTCACACATCGTCATCATCCGACGTGTCGCTGCTACTTGGAACGAATGATCTGTTaGGAAATCATCGAGGCATTG | + |
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Preference number: 2 (lower is better) Translates to: AVRISFTHRHHPTCRCYLERMIC*EIIEAL Trigger: CAATGCCTCGATGATTTCTCAACAGATCATTCGTTC...CAAGTAGCAGCGACACGTCGGATGATGACGATGTGTGAAGGAGATCCTCACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR CCA 90 bp | CACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCGCCCCTCCTGAAGCTTaGAAGAGCGCCTGGCATGTC | + |
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Preference number: 2 (lower is better) Translates to: HIASQEKCCSDEESQCWIAPPEA*KSAWHV Trigger: GACATGCCAGGCGCTCTTCCAAGCTTCAGGAGGGGC...GATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| 3UTR-3UTR GCA 90 bp | CCAGTTCCATTCTTAACTGGCTGTGACTGGAGGTTTCCTGCTACTGGGAATCCACAATTCACCCCAAACTaGATGAGAGATGTATCACAC | + |
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Preference number: 2 (lower is better) Translates to: PVPFLTGCDWRFPATGNPQFTPN*MRDVSH Trigger: GTGTGATACATCTCTCATGCAGTTTGGGGTGAATTG...TGGATTCCCAGTAGCAGGAAACCTCCAGTCACAGCCAGTTAAGAATGGAACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR CCA 90 bp | TTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAAGGGTATGTGTGTGTCTaGGCGTGTAGGCCCCAAACA | + |
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Preference number: 2 (lower is better) Translates to: LHRHIASQEKCCSDEESQGYVCV*ACRPQT Trigger: TGTTTGGGGCCTACACGCCCAGACACACACATACCC...TTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR CCA 90 bp | CATCGTCATCATCCGACGTGTCGCTGCTACTTGTCTCTGTGTCATCATTCTCAAGTGGAACAGCAGGTTTaGGGACTAAGCCTTTATAAA | + |
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Preference number: 2 (lower is better) Translates to: HRHHPTCRCYLSLCHHSQVEQQV*GLSLYK Trigger: TTTATAAAGGCTTAGTCCCCAAACCTGCTGTTCCAC...TTGAGAATGATGACACAGAGACAAGTAGCAGCGACACGTCGGATGATGACGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR GCA 90 bp | GGGGAGTGGATAAGGAGGTGCACACGTAGAGTTGAAGATTTCCACAGTTTGAAACAATTCACCCCAAACTaGATGAGAGATGTATCACAC | + |
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Preference number: 2 (lower is better) Translates to: GEWIRRCTRRVEDFHSLKQFTPN*MRDVSH Trigger: GTGTGATACATCTCTCATGCAGTTTGGGGTGAATTG...TTTCAAACTGTGGAAATCTTCAACTCTACGTGTGCACCTCCTTATCCACTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
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| 3UTR-3UTR TCA 90 bp | CACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCATTCTTAACTGGCTGTaGCTGGAGGTTTCCTGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: HIASQEKCCSDEESQCWIILNWL*LEVSCY Trigger: GTAGCAGGAAACCTCCAGTCACAGCCAGTTAAGAAT...GATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR TCA 90 bp | TTTAATAATCTGTGTTCTGCCTCTAGTGAACTGGAAAGAACATCAGTTTGTGGAGTCGTCGTCCTTCTCTaGGCCAGCATGACTTTCATC | + |
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Preference number: 2 (lower is better) Translates to: FNNLCSASSELERTSVCGVVVLL*ASMTFI Trigger: GATGAAAGTCATGCTGGCTCAGAGAAGGACGACGAC...TCCACAAACTGATGTTCTTTCCAGTTCACTAGAGGCAGAACACAGATTATTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTAAAGCTGTGAGGATCTCCTTCACACATCGTCATCATCCGACGTGTCGCATATCTCTTTCTTGGTaGGTAGTATTGCTGTTATGC | + |
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Preference number: 2 (lower is better) Translates to: ISKAVRISFTHRHHPTCRISLSW*VVLLLC Trigger: GCATAACAGCAATACTACTCACCAAGAAAGAGATAT...GCGACACGTCGGATGATGACGATGTGTGAAGGAGATCCTCACAGCTTTAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR CCA 90 bp | CATCGTCATCATCCGACGTGTCGCTGCTACTTGTCTCTGTGTCATCATTCTCAAGCCTTTATAAACACTTaGACCAGTTCCATTCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: HRHHPTCRCYLSLCHHSQAFINT*TSSILN Trigger: GTTAAGAATGGAACTGGTCCAAGTGTTTATAAAGGC...TTGAGAATGATGACACAGAGACAAGTAGCAGCGACACGTCGGATGATGACGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAATAATCTGTGTTCTGCCTCTAGTGAACTGGAAAGAACATCAGTTTGTGGATTAACTGGCTGTGACTaGAGGTTTCCTGCTACTGGG | + |
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Preference number: 2 (lower is better) Translates to: FNNLCSASSELERTSVCGLTGCD*RFPATG Trigger: CCCAGTAGCAGGAAACCTCCAGTCACAGCCAGTTAA...TCCACAAACTGATGTTCTTTCCAGTTCACTAGAGGCAGAACACAGATTATTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR TCA 90 bp | TTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATCACCCCAAACTGCATaGGAGATGTATCACACTAAC | + |
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Preference number: 2 (lower is better) Translates to: LHRHIASQEKCCSDEESQSPQTA*EMYHTN Trigger: GTTAGTGTGATACATCTCTCATGCAGTTTGGGGTGA...TTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 ENSMUST00000136471.9 |
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| 3UTR-3UTR TCA 90 bp | AATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGTCACCCCAAACTGCATaGGAGATGTATCACACTAAC | + |
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Preference number: 2 (lower is better) Translates to: NLICYIVTLLVKRNAAVMSPQTA*EMYHTN Trigger: GTTAGTGTGATACATCTCTCATGCAGTTTGGGGTGA...CATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 ENSMUST00000136471.9 |
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| 3UTR-3UTR TCA 90 bp | CACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCTCTCAATTGTGGGTTTaGAAGTGCTGTTTTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: HIASQEKCCSDEESQCWISQLWV*KCCFSR Trigger: CCTGGAAAAACAGCACTTTCAAACCCACAATTGAGA...GATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGTGGATAAGGAGGTGCACACGTAGAGTTGAAGATTTCCACAGTTTGAAACCAACACAACATTCTTaGTTTTCTTCATATCGAAGT | + |
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Preference number: 2 (lower is better) Translates to: GEWIRRCTRRVEDFHSLKPTQHS*FSSYRS Trigger: ACTTCGATATGAAGAAAACCAAGAATGTTGTGTTGG...TTTCAAACTGTGGAAATCTTCAACTCTACGTGTGCACCTCCTTATCCACTCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
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| 3UTR-3UTR CCA 90 bp | TTTAATAATCTGTGTTCTGCCTCTAGTGAACTGGAAAGAACATCAGTTTGTGGATGTAGGTTTTGTAGGTaGAACAGCAGGTTTGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: FNNLCSASSELERTSVCGCRFCR*NSRFGD Trigger: GTCCCCAAACCTGCTGTTCCACCTACAAAACCTACA...TCCACAAACTGATGTTCTTTCCAGTTCACTAGAGGCAGAACACAGATTATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR GCA 90 bp | TTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAACAATTCACCCCAAACTaGATGAGAGATGTATCACAC | + |
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Preference number: 2 (lower is better) Translates to: LHRHIASQEKCCSDEESQQFTPN*MRDVSH Trigger: GTGTGATACATCTCTCATGCAGTTTGGGGTGAATTG...TTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 ENSMUST00000136471.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGGTGAAAAAGATAGGACTCTaGAAGCAAAACTGTAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSHIHCYQRLKRNLFGKVKKIGL*KQNCKL Trigger: CAGCTTACAGTTTTGCTTGCAGAGTCCTATCTTTTT...CACCTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| 3UTR-3UTR GCA 90 bp | AGTTTATTTTCCATGTTGTGGACAGATCCAGTCAGTGATCAGGTTTTCTGCATGAGTCAAGAGAAATGCTaGAGTGATGAAGAAAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: SLFSMLWTDPVSDQVFCMSQEKC*SDEESQ Trigger: TTGACTTTCTTCATCACTGCAGCATTTCTCTTGACT...CATGCAGAAAACCTGATCACTGACTGGATCTGTCCACAACATGGAAAATAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| 3UTR-3UTR CCA 90 bp | TTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAACCAACACAACATTCTTaGTTTTCTTCATATCGAAGT | + |
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Preference number: 2 (lower is better) Translates to: LHRHIASQEKCCSDEESQPTQHS*FSSYRS Trigger: ACTTCGATATGAAGAAAACCAAGAATGTTGTGTTGG...TTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 ENSMUST00000136471.9 |
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| 3UTR-3UTR CCA 90 bp | AATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAATGACCAGCATTCTTaGAGTTCTAGATTTAGGATT | + |
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Preference number: 2 (lower is better) Translates to: NLICYIVTLLVKRNAAVMNDQHS*SSRFRI Trigger: AATCCTAAATCTAGAACTCCAAGAATGCTGGTCATT...CATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR CCA 72 bp | ACACTTGGACCAGTTCCATTCTTAACTGGCTGTGACTaGAGGTTTCCTGCTACTGGGAATCCAGATAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: TLGPVPFLTGCD*RFPATGNPDSC Trigger: ACAGCTATCTGGATTCCCAGTAGCAGGAAACCTCCAGTCACAGCCAGTTAAGAATGGAACTGGTCCAAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR GCA 72 bp | GAAGAGCGCCTGGCATGTCTCCTCTCCCACATTCACTaGTACCAAAGACTAAAGAGGAATTTGTTTGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: EERLACLLSHIH*YQRLKRNLFGK Trigger: CTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAGAGGAGACATGCCAGGCGCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| 3UTR GCA 72 bp | ATCTCCTTCACACATCGTCATCATCCGACGTGTCGCTaGTACTTGTCTCTGTGTCATCATTCTCAATTGTGG | + |
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Preference number: 3 (lower is better) Translates to: ISFTHRHHPTCR*YLSLCHHSQLW Trigger: CCACAATTGAGAATGATGACACAGAGACAAGTAGCAGCGACACGTCGGATGATGACGATGTGTGAAGGAGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR TCA 72 bp | TCAGTTTGTGGAAAAGTCGAAGAACGAATGATCTGTTaGGAAATCATCGAGGCATTGCCGTTCTCCTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: SVCGKVEERMIC*EIIEALPFSCG Trigger: TCCACAGGAGAACGGCAATGCCTCGATGATTTCTCAACAGATCATTCGTTCTTCGACTTTTCCACAAACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
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| 3UTR-3UTR CAA 90 bp | CTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGGTGACCCCAACACAACATTCTaGGTTTTCTTCATATCGAAG | + |
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Preference number: 3 (lower is better) Translates to: LPHSLLPKTKEEFVWKGDPNTTF*VFFISK Trigger: CTTCGATATGAAGAAAACCAAGAATGTTGTGTTGGG...GTCACCTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| 3UTR-3UTR CAA 90 bp | CACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCCCCAACACAACATTCTaGGTTTTCTTCATATCGAAG | + |
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Preference number: 3 (lower is better) Translates to: HIASQEKCCSDEESQCWIPNTTF*VFFISK Trigger: CTTCGATATGAAGAAAACCAAGAATGTTGTGTTGGG...GATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 ENSMUST00000136471.9 |
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| 3UTR-3UTR CAA 90 bp | AATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGCCCAACACAACATTCTaGGTTTTCTTCATATCGAAG | + |
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Preference number: 3 (lower is better) Translates to: NLICYIVTLLVKRNAAVMPNTTF*VFFISK Trigger: CTTCGATATGAAGAAAACCAAGAATGTTGTGTTGGG...CATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 ENSMUST00000136471.9 |
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| 3UTR CCA 72 bp | CATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTaGAAAGGTGACTTAGTACAAGAGTTGAGTTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: HSLLPKTKEEFV*KGDLVQELSSR Trigger: TCTTGAACTCAACTCTTGTACTAAGTCACCTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| 3UTR TCA 72 bp | ATAGTTCTTCATTTTTACAATTCACCCCAAACTGCATaGGAGATGTATCACACTAACATTTCTAAAGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: IVLHFYNSPQTA*EMYHTNISKAV Trigger: CACAGCTTTAGAAATGTTAGTGTGATACATCTCTCATGCAGTTTGGGGTGAATTGTAAAAATGAAGAACTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 ENSMUST00000136471.9 |
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| CDS-3UTR CCA 90 bp | AAAGCTCCTGACAAGCCCCTCCTGAAGCTTGGAAGAGCGCCTGGCATGTCTCCTGTGGAACAGCAGGTTTaGGGACTAAGCCTTTATAAA | + |
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Preference number: 4 (lower is better) Translates to: KAPDKPLLKLGRAPGMSPVEQQV*GLSLYK Trigger: TTTATAAAGGCTTAGTCCCCAAACCTGCTGTTCCAC...AGGAGACATGCCAGGCGCTCTTCCAAGCTTCAGGAGGGGCTTGTCAGGAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| CDS-3UTR CCA 90 bp | TCTCCTCTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGGGTATGTGTGTGTCTaGGCGTGTAGGCCCCAAACA | + |
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Preference number: 4 (lower is better) Translates to: SPLPHSLLPKTKEEFVWKGYVCV*ACRPQT Trigger: TGTTTGGGGCCTACACGCCCAGACACACACATACCC...TTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAGAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| CDS-3UTR TCA 90 bp | CTCCTCTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGTCCAGGGTCCAAACTTaGAGTCACAGATCAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LLSHIHCYQRLKRNLFGKSRVQT*SHRSGH Trigger: ATGGCCTGATCTGTGACTTCAAGTTTGGACCCTGGA...CTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAGAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| CDS-3UTR CCA 90 bp | CTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGGTGACTTAACTGGCTGTGACTaGAGGTTTCCTGCTACTGGG | + |
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Preference number: 4 (lower is better) Translates to: LPHSLLPKTKEEFVWKGDLTGCD*RFPATG Trigger: CCCAGTAGCAGGAAACCTCCAGTCACAGCCAGTTAA...GTCACCTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| CDS-3UTR TCA 90 bp | CTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGGTGACATTCTTAACTGGCTGTaGCTGGAGGTTTCCTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: LPHSLLPKTKEEFVWKGDILNWL*LEVSCY Trigger: GTAGCAGGAAACCTCCAGTCACAGCCAGTTAAGAAT...GTCACCTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| CDS-3UTR TCA 90 bp | CTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCAACCAAAGTCGTCGTCCTTCTCTaGGCCAGCATGACTTTCATC | + |
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Preference number: 4 (lower is better) Translates to: LVKRNAAVMKKVNVGSTKVVVLL*ASMTFI Trigger: GATGAAAGTCATGCTGGCTCAGAGAAGGACGACGAC...TTTGGTTGATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
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| CDS-3UTR TCA 90 bp | AATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGGTCGTCGTCCTTCTCTaGGCCAGCATGACTTTCATC | + |
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Preference number: 4 (lower is better) Translates to: NLICYIVTLLVKRNAAVMVVVLL*ASMTFI Trigger: GATGAAAGTCATGCTGGCTCAGAGAAGGACGACGAC...CATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
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| CDS-3UTR GCA 90 bp | AGTTTATTTTCCATGTTGTGGACAGATCCAGTCAGTGATCAGGTTTTCTGCATGCATCCGACGTGTCGCTaGTACTTGTCTCTGTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SLFSMLWTDPVSDQVFCMHPTCR*YLSLCH Trigger: ATGACACAGAGACAAGTAGCAGCGACACGTCGGATG...CATGCAGAAAACCTGATCACTGACTGGATCTGTCCACAACATGGAAAATAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| CDS-3UTR CCA 90 bp | CACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCTTAACTGGCTGTGACTaGAGGTTTCCTGCTACTGGG | + |
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Preference number: 4 (lower is better) Translates to: HIASQEKCCSDEESQCWILTGCD*RFPATG Trigger: CCCAGTAGCAGGAAACCTCCAGTCACAGCCAGTTAA...GATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
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| CDS-3UTR CCA 90 bp | GGGGAGTGGATAAGGAGGTGCACACGTAGAGTTGAAGATTTCCACAGTTTGAAACTGCCTCTAGTGAACTaGAAAGAACATCAGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEWIRRCTRRVEDFHSLKLPLVN*KEHQFV Trigger: CACAAACTGATGTTCTTTCCAGTTCACTAGAGGCAG...TTTCAAACTGTGGAAATCTTCAACTCTACGTGTGCACCTCCTTATCCACTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| 3UTR CAA 72 bp | ATCAGTTTGTGGAAAAGTCGAAGAACGAATGATCTGTaGAGAAATCATCGAGGCATTGCCGTTCTCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISLWKSRRTNDL*RNHRGIAVLLW Trigger: CCACAGGAGAACGGCAATGCCTCGATGATTTCTCAACAGATCATTCGTTCTTCGACTTTTCCACAAACTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136471.9 |
||
| CDS-3UTR TCA 90 bp | CTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCAACCAAATCCAGGGTCCAAACTTaGAGTCACAGATCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVKRNAAVMKKVNVGSTKSRVQT*SHRSGH Trigger: ATGGCCTGATCTGTGACTTCAAGTTTGGACCCTGGA...TTTGGTTGATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAATGTAGGTTTTGTAGGTaGAACAGCAGGTTTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPLPHSLLPKTKEEFVWKCRFCR*NSRFGD Trigger: GTCCCCAAACCTGCTGTTCCACCTACAAAACCTACA...TTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAGAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
||
| CDS-3UTR TCA 90 bp | CACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCAGAATCAAAGCCATCTaGAGAATTGTGTCGTCGACG | + |
|
Preference number: 4 (lower is better) Translates to: HIASQEKCCSDEESQCWIRIKAI*RIVSST Trigger: CGTCGACGACACAATTCTTCAGATGGCTTTGATTCT...GATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 ENSMUST00000136471.9 |
||
| CDS-3UTR TCA 90 bp | CTCCTCTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGGAACGAATGATCTGTTaGGAAATCATCGAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSHIHCYQRLKRNLFGKERMIC*EIIEAL Trigger: CAATGCCTCGATGATTTCTCAACAGATCATTCGTTC...CTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAGAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
||
| CDS-3UTR TCA 90 bp | CTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGGTGACTCTCAATTGTGGGTTTaGAAGTGCTGTTTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPHSLLPKTKEEFVWKGDSQLWV*KCCFSR Trigger: CCTGGAAAAACAGCACTTTCAAACCCACAATTGAGA...GTCACCTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
||
| CDS-3UTR GCA 90 bp | CTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGGTGACCAGCCTCAAACTGTCTaGGTTCTCTTTTGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPHSLLPKTKEEFVWKGDQPQTV*VLFCLL Trigger: AAGAAGACAAAAGAGAACGCAGACAGTTTGAGGCTG...GTCACCTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
||
| CDS-3UTR GCA 90 bp | GGGGAGTGGATAAGGAGGTGCACACGTAGAGTTGAAGATTTCCACAGTTTGAAATTTTCACTGTCTTCCTaGCAGCCCATTTCTTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GEWIRRCTRRVEDFHSLKFSLSS*QPISFN Trigger: ATTAAAAGAAATGGGCTGGCAGGAAGACAGTGAAAA...TTTCAAACTGTGGAAATCTTCAACTCTACGTGTGCACCTCCTTATCCACTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CCA 90 bp | TTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTAGGTTTTGTAGGTaGAACAGCAGGTTTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LHRHIASQEKCCSDEESQCRFCR*NSRFGD Trigger: GTCCCCAAACCTGCTGTTCCACCTACAAAACCTACA...TTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR TCA 90 bp | TTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAAAGAATCAAAGCCATCTaGAGAATTGTGTCGTCGACG | + |
|
Preference number: 4 (lower is better) Translates to: LHRHIASQEKCCSDEESQRIKAI*RIVSST Trigger: CGTCGACGACACAATTCTTCAGATGGCTTTGATTCT...TTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 ENSMUST00000136471.9 |
||
| CDS-3UTR TCA 90 bp | CACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCTGGTATCCCCCACGATaGTTTATGTTTTCTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: HIASQEKCCSDEESQCWIWYPPR*FMFSVP Trigger: TGGTACAGAAAACATAAATCATCGTGGGGGATACCA...GATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR TCA 90 bp | TTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATTCTCTGAGCCAGCATaGCTTTCATCTTCATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHRHIASQEKCCSDEESQFSEPA*LSSSCS Trigger: GGAACATGAAGATGAAAGTCATGCTGGCTCAGAGAA...TTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR TCA 90 bp | CACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCGAACGAATGATCTGTTaGGAAATCATCGAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: HIASQEKCCSDEESQCWIERMIC*EIIEAL Trigger: CAATGCCTCGATGATTTCTCAACAGATCATTCGTTC...GATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR GCA 90 bp | CACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCCAGCCTCAAACTGTCTaGGTTCTCTTTTGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HIASQEKCCSDEESQCWIQPQTV*VLFCLL Trigger: AAGAAGACAAAAGAGAACGCAGACAGTTTGAGGCTG...GATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CCA 90 bp | GGGGAGTGGATAAGGAGGTGCACACGTAGAGTTGAAGATTTCCACAGTTTGAAAAATGACCAGCATTCTTaGAGTTCTAGATTTAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GEWIRRCTRRVEDFHSLKNDQHS*SSRFRI Trigger: AATCCTAAATCTAGAACTCCAAGAATGCTGGTCATT...TTTCAAACTGTGGAAATCTTCAACTCTACGTGTGCACCTCCTTATCCACTCCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR TCA 90 bp | AATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGTGGTATCCCCCACGATaGTTTATGTTTTCTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: NLICYIVTLLVKRNAAVMWYPPR*FMFSVP Trigger: TGGTACAGAAAACATAAATCATCGTGGGGGATACCA...CATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR TCA 90 bp | CTCCTCTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGATATCTCTTTCTTGGTaGGTAGTATTGCTGTTATGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSHIHCYQRLKRNLFGKISLSW*VVLLLC Trigger: GCATAACAGCAATACTACTCACCAAGAAAGAGATAT...CTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAGAGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
||
| CDS-3UTR TCA 90 bp | AATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGTCTCAATTGTGGGTTTaGAAGTGCTGTTTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLICYIVTLLVKRNAAVMSQLWV*KCCFSR Trigger: CCTGGAAAAACAGCACTTTCAAACCCACAATTGAGA...CATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR GCA 90 bp | CTCCTCTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGTTTTCACTGTCTTCCTaGCAGCCCATTTCTTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSHIHCYQRLKRNLFGKFSLSS*QPISFN Trigger: ATTAAAAGAAATGGGCTGGCAGGAAGACAGTGAAAA...CTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAGAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
||
| CDS-3UTR CCA 90 bp | CTCCTCTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGGCCTTTATAAACACTTaGACCAGTTCCATTCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLSHIHCYQRLKRNLFGKAFINT*TSSILN Trigger: GTTAAGAATGGAACTGGTCCAAGTGTTTATAAAGGC...CTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAGAGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
||
| CDS-3UTR CCA 90 bp | CTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCAACCAAAGTGGAACAGCAGGTTTaGGGACTAAGCCTTTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVKRNAAVMKKVNVGSTKVEQQV*GLSLYK Trigger: TTTATAAAGGCTTAGTCCCCAAACCTGCTGTTCCAC...TTTGGTTGATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CCA 90 bp | CTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCAACCAAACTGCCTCTAGTGAACTaGAAAGAACATCAGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVKRNAAVMKKVNVGSTKLPLVN*KEHQFV Trigger: CACAAACTGATGTTCTTTCCAGTTCACTAGAGGCAG...TTTGGTTGATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGGTGAATGACCAGCATTCTTaGAGTTCTAGATTTAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LSHIHCYQRLKRNLFGKVNDQHS*SSRFRI Trigger: AATCCTAAATCTAGAACTCCAAGAATGCTGGTCATT...CACCTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
||
| CDS-3UTR CCA 90 bp | CTCCTCTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGAAGAACATCAGTTTGTaGAAAAGTCGAAGAACGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSHIHCYQRLKRNLFGKKNISL*KSRRTN Trigger: ATTCGTTCTTCGACTTTTCCACAAACTGATGTTCTT...CTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAGAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
||
| CDS-3UTR TCA 90 bp | CTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCAACCAAAATATCTCTTTCTTGGTaGGTAGTATTGCTGTTATGC | + |
|
Preference number: 4 (lower is better) Translates to: LVKRNAAVMKKVNVGSTKISLSW*VVLLLC Trigger: GCATAACAGCAATACTACTCACCAAGAAAGAGATAT...TTTGGTTGATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CCA 90 bp | AATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGGCCTTTATAAACACTTaGACCAGTTCCATTCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLICYIVTLLVKRNAAVMAFINT*TSSILN Trigger: GTTAAGAATGGAACTGGTCCAAGTGTTTATAAAGGC...CATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CCA 90 bp | TTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAAATTGCCGTTCTCCTGTaGAATTTCATTTTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHRHIASQEKCCSDEESQIAVLL*NFIFIK Trigger: TTTGATGAAAATGAAATTCCACAGGAGAACGGCAAT...TTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CCA 90 bp | AATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGATTGCCGTTCTCCTGTaGAATTTCATTTTCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLICYIVTLLVKRNAAVMIAVLL*NFIFIK Trigger: TTTGATGAAAATGAAATTCCACAGGAGAACGGCAAT...CATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CCA 90 bp | CTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCAACCAAAAAGAACATCAGTTTGTaGAAAAGTCGAAGAACGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVKRNAAVMKKVNVGSTKKNISL*KSRRTN Trigger: ATTCGTTCTTCGACTTTTCCACAAACTGATGTTCTT...TTTGGTTGATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CAA 90 bp | GGGGAGTGGATAAGGAGGTGCACACGTAGAGTTGAAGATTTCCACAGTTTGAAAAAGCCATCTGAAGAATaGTGTCGTCGACGACTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GEWIRRCTRRVEDFHSLKKPSEE*CRRRLT Trigger: TGTGAGTCGTCGACGACACAATTCTTCAGATGGCTT...TTTCAAACTGTGGAAATCTTCAACTCTACGTGTGCACCTCCTTATCCACTCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGGTGTTCCAGGGTCCAAACTaGAAGTCACAGATCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSHIHCYQRLKRNLFGKVFQGPN*KSQIRP Trigger: TGGCCTGATCTGTGACTTCAAGTTTGGACCCTGGAA...CACCTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
||
| CDS-3UTR CAA 90 bp | CTCCTCTCCCACATTCACTGCTACCAAAGACTAAAGAGGAATTTGTTTGGAAAGAAGCCATCTGAAGAATaGTGTCGTCGACGACTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LLSHIHCYQRLKRNLFGKKPSEE*CRRRLT Trigger: TGTGAGTCGTCGACGACACAATTCTTCAGATGGCTT...CTTTCCAAACAAATTCCTCTTTAGTCTTTGGTAGCAGTGAATGTGGGAGAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
||
| CDS-3UTR CAA 90 bp | GGGGAGTGGATAAGGAGGTGCACACGTAGAGTTGAAGATTTCCACAGTTTGAAAGGAAAGAACATCAGTTaGTGGAAAAGTCGAAGAACG | + |
|
Preference number: 5 (lower is better) Translates to: GEWIRRCTRRVEDFHSLKGKNIS*WKSRRT Trigger: CGTTCTTCGACTTTTCCACAAACTGATGTTCTTTCC...TTTCAAACTGTGGAAATCTTCAACTCTACGTGTGCACCTCCTTATCCACTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CAA 90 bp | TTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATTCCAGGGTCCAAACTaGAAGTCACAGATCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LHRHIASQEKCCSDEESQFQGPN*KSQIRP Trigger: TGGCCTGATCTGTGACTTCAAGTTTGGACCCTGGAA...TTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CAA 90 bp | AATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGCCATCTGAAGAATaGTGTCGTCGACGACTCACA | + |
|
Preference number: 5 (lower is better) Translates to: NLICYIVTLLVKRNAAVMKPSEE*CRRRLT Trigger: TGTGAGTCGTCGACGACACAATTCTTCAGATGGCTT...CATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 ENSMUST00000136471.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTATTTTCCATGTTGTGGACAGATCCAGTCAGTGATCAGGTTTTCTGCATGTTCCTCCCAGTTTCATaGTCAGGGATGCTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLFSMLWTDPVSDQVFCMFLPVS*SGMLFS Trigger: TGAAAACAGCATCCCTGACAATGAAACTGGGAGGAA...CATGCAGAAAACCTGATCACTGACTGGATCTGTCCACAACATGGAAAATAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
||
| CDS-3UTR CAA 90 bp | CACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCTGTCTGCGTTCTCTTTaGTCTTCTTTCCTCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HIASQEKCCSDEESQCWICLRSL*SSFLPV Trigger: AACTGGGAGGAAAGAAGACAAAAGAGAACGCAGACA...GATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CAA 90 bp | TTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAAACGTGTCGCTGCTACTaGTCTCTGTGTCATCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHRHIASQEKCCSDEESQTCRCY*SLCHHS Trigger: AGAATGATGACACAGAGACAAGTAGCAGCGACACGT...TTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CAA 90 bp | AATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGACGTGTCGCTGCTACTaGTCTCTGTGTCATCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: NLICYIVTLLVKRNAAVMTCRCY*SLCHHS Trigger: AGAATGATGACACAGAGACAAGTAGCAGCGACACGT...CATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CAA 90 bp | AATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGTTCCTCCCAGTTTCATaGTCAGGGATGCTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NLICYIVTLLVKRNAAVMFLPVS*SGMLFS Trigger: TGAAAACAGCATCCCTGACAATGAAACTGGGAGGAA...CATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CAA 90 bp | CTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCAACCAAATGTCTGCGTTCTCTTTaGTCTTCTTTCCTCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LVKRNAAVMKKVNVGSTKCLRSL*SSFLPV Trigger: AACTGGGAGGAAAGAAGACAAAAGAGAACGCAGACA...TTTGGTTGATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CAA 90 bp | CACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCAGTTTGGCTTTTCCATaGTGTAGGTTTTGTAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HIASQEKCCSDEESQCWISLAFP*CRFCRW Trigger: CCACCTACAAAACCTACACAATGGAAAAGCCAAACT...GATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAGCAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CAA 90 bp | AATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAGTTTGGCTTTTCCATaGTGTAGGTTTTGTAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NLICYIVTLLVKRNAAVMSLAFP*CRFCRW Trigger: CCACCTACAAAACCTACACAATGGAAAAGCCAAACT...CATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
||
| CDS-3UTR CAA 90 bp | AGTTTATTTTCCATGTTGTGGACAGATCCAGTCAGTGATCAGGTTTTCTGCATGAGAACGAATGATCTGTaGAGAAATCATCGAGGCATT | + |
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Preference number: 5 (lower is better) Translates to: SLFSMLWTDPVSDQVFCMRTNDL*RNHRGI Trigger: AATGCCTCGATGATTTCTCAACAGATCATTCGTTCT...CATGCAGAAAACCTGATCACTGACTGGATCTGTCCACAACATGGAAAATAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047627.14 |
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| CDS-3UTR CAA 90 bp | CTAGTCAAGAGAAATGCTGCAGTGATGAAGAAAGTCAATGTTGGATCAACCAAAGGAAAGAACATCAGTTaGTGGAAAAGTCGAAGAACG | + |
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Preference number: 5 (lower is better) Translates to: LVKRNAAVMKKVNVGSTKGKNIS*WKSRRT Trigger: CGTTCTTCGACTTTTCCACAAACTGATGTTCTTTCC...TTTGGTTGATCCAACATTGACTTTCTTCATCACTGCAGCATTTCTCTTGACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
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| CDS-3UTR CAA 90 bp | AATCTCATTTGTTACATCGTCACATTGCTAGTCAAGAGAAATGCTGCAGTGATGAGAACGAATGATCTGTaGAGAAATCATCGAGGCATT | + |
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Preference number: 5 (lower is better) Translates to: NLICYIVTLLVKRNAAVMRTNDL*RNHRGI Trigger: AATGCCTCGATGATTTCTCAACAGATCATTCGTTCT...CATCACTGCAGCATTTCTCTTGACTAGCAATGTGACGATGTAACAAATGAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047627.14 ENSMUST00000091236.11 |
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