Pregenerated sensors for GPBAR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064272Ensembl transcript IDs: ENSMUST00000077985.4
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGCCCGCTCCAGTCGGCGGATCTCACACAGCTGGCGGTGGGCAGTaGCCAACACGCGGACAGAGAGAAGGGCAGTGGCCCCCACGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LPAPVGGSHTAGGGQ*PTRGQREGQWPPRQ Trigger: CTGCCGTGGGGGCCACTGCCCTTCTCTCTGTCCGCGTGTTGGCCACTGCCCACCGCCAGCTGTGTGAGATCCGCCGACTGGAGCGGGCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 90 bp | CGGCACACTGCCCGCTCCAGTCGGCGGATCTCACACAGCTGGCGGTaGGCAGTGGCCAACACGCGGACAGAGAGAAGGGCAGTGGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: RHTARSSRRISHSWR*AVANTRTERRAVAP Trigger: GGGGGCCACTGCCCTTCTCTCTGTCCGCGTGTTGGCCACTGCCCACCGCCAGCTGTGTGAGATCCGCCGACTGGAGCGGGCAGTGTGCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 90 bp | ACATCGCGGCACACTGCCCGCTCCAGTCGGCGGATCTCACACAGCTaGCGGTGGGCAGTGGCCAACACGCGGACAGAGAGAAGGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: TSRHTARSSRRISHS*RWAVANTRTERRAV Trigger: CACTGCCCTTCTCTCTGTCCGCGTGTTGGCCACTGCCCACCGCCAGCTGTGTGAGATCCGCCGACTGGAGCGGGCAGTGTGCCGCGATGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS GCA 90 bp | GCCCGGCTAGTAGTAGGCTTAGGAAGAAGCAGCCAGCAGGTGGGCTaGGCAAGTGGCGGTCCAGGGCGATGCCTAGGGCCAGGAGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: ARLVVGLGRSSQQVG*ASGGPGRCLGPGAG Trigger: ACCTGCTCCTGGCCCTAGGCATCGCCCTGGACCGCCACTTGCGCAGCCCACCTGCTGGCTGCTTCTTCCTAAGCCTACTACTAGCCGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 90 bp | GCTGGCGGTGGGCAGTGGCCAACACGCGGACAGAGAGAAGGGCAGTaGCCCCCACGGCAGGCAACAGGAGGCCATAAACTTCCAGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: AGGGQWPTRGQREGQ*PPRQATGGHKLPGR Trigger: TCTACCTGGAAGTTTATGGCCTCCTGTTGCCTGCCGTGGGGGCCACTGCCCTTCTCTCTGTCCGCGTGTTGGCCACTGCCCACCGCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 90 bp | CCAGGTAGAGGTAGGGGGCTGGGAAGACAGCTTGGGAGCTGCAGTTaGCATCAGGGCTCCAATGGTTCCAGCCCAGAGCAGGCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGRGRGLGRQLGSCS*HQGSNGSSPEQAGW Trigger: CCAGCCTGCCTGCTCTGGGCTGGAACCATTGGAGCCCTGATGCCAACTGCAGCTCCCAAGCTGTCTTCCCAGCCCCCTACCTCTACCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS TCA 90 bp | CCATGGCCACAGGCACAGCGGCAGCACTGGTGCTGCCCAATGAGATaGGCGATAACAGAGTTCCAGGCCCTAGTGGTGGGCGACGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: PWPQAQRQHWCCPMR*AITEFQALVVGDAH Trigger: ATGAGCGTCGCCCACCACTAGGGCCTGGAACTCTGTTATCGCTCATCTCATTGGGCAGCACCAGTGCTGCCGCTGTGCCTGTGGCCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 90 bp | GGCTACTGGTGTGGTAGGCAGTGCTGGGGCCTGGATTGTCCCTCTTaGCTCTTCCTCGAAGCACTCGTAGACACCTTTGGGCAGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: GYWCGRQCWGLDCPS*LFLEALVDTFGQLS Trigger: GGACAGCTGCCCAAAGGTGTCTACGAGTGCTTCGAGGAAGAGCCAAGAGGGACAATCCAGGCCCCAGCACTGCCTACCACACCAGTAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 90 bp | CTAGTGGTGGGCGACGCTCATAGGCCAAGACTGACAGGAGCAATGTaGCCACATAGGGCCCCCAACACAGCAAGAAGAGCAGTGTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: LVVGDAHRPRLTGAM*PHRAPNTARRAVWL Trigger: GAGCCACACTGCTCTTCTTGCTGTGTTGGGGGCCCTATGTGGCCACATTGCTCCTGTCAGTCTTGGCCTATGAGCGTCGCCCACCACTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS GCA 90 bp | TCAAGTCCAGGTCAATGCTGCATTGGCTACTGGTGTGGTAGGCAGTaGTGGGGCCTGGATTGTCCCTCTTGGCTCTTCCTCGAAGCACTC | + |
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Preference number: 5 (lower is better) Translates to: SSPGQCCIGYWCGRQ*WGLDCPSWLFLEAL Trigger: GAGTGCTTCGAGGAAGAGCCAAGAGGGACAATCCAGGCCCCAGCACTGCCTACCACACCAGTAGCCAATGCAGCATTGACCTGGACTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 90 bp | AGTCCAGGTCAATGCTGCATTGGCTACTGGTGTGGTAGGCAGTGCTaGGGCCTGGATTGTCCCTCTTGGCTCTTCCTCGAAGCACTCGTA | + |
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Preference number: 5 (lower is better) Translates to: SPGQCCIGYWCGRQC*GLDCPSWLFLEALV Trigger: TACGAGTGCTTCGAGGAAGAGCCAAGAGGGACAATCCAGGCCCCAGCACTGCCTACCACACCAGTAGCCAATGCAGCATTGACCTGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 90 bp | CATGCACCAGCAGCAGATTGGCAAGCAGGGAAAGGAAACAAAAGTTaGGGGTCAAGTGGAGAAGGAGGCAGGACCAGTAGCCCTGATGGT | + |
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Preference number: 5 (lower is better) Translates to: HAPAADWQAGKGNKS*GSSGEGGRTSSPDG Trigger: ACCATCAGGGCTACTGGTCCTGCCTCCTTCTCCACTTGACCCCCAACTTTTGTTTCCTTTCCCTGCTTGCCAATCTGCTGCTGGTGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 72 bp | CCAGTCGGCGGATCTCACACAGCTGGCGGTGGGCAGTaGCCAACACGCGGACAGAGAGAAGGGCAGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PVGGSHTAGGGQ*PTRGQREGQWP Trigger: GGGCCACTGCCCTTCTCTCTGTCCGCGTGTTGGCCACTGCCCACCGCCAGCTGTGTGAGATCCGCCGACTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 72 bp | TCCAGGGGGCTGTGTAGCGCTGATCACCCAGCCCCATaGCCACAGGCACAGCGGCAGCACTGGTGCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SRGLCSADHPAP*PQAQRQHWCCP Trigger: TGGGCAGCACCAGTGCTGCCGCTGTGCCTGTGGCCATGGGGCTGGGTGATCAGCGCTACACAGCCCCCTGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 72 bp | CACACTGCCCGCTCCAGTCGGCGGATCTCACACAGCTaGCGGTGGGCAGTGGCCAACACGCGGACAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: HTARSSRRISHS*RWAVANTRTER Trigger: TCTCTCTGTCCGCGTGTTGGCCACTGCCCACCGCCAGCTGTGTGAGATCCGCCGACTGGAGCGGGCAGTGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CAA 90 bp | CTGCGCAAGTGGCGGTCCAGGGCGATGCCTAGGGCCAGGAGCAGGTaGGCGATGACGATGAGGCTTGCCAGGGCCAAGGAAAGCCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LRKWRSRAMPRARSR*AMTMRLARAKESPR Trigger: TCTGGGGCTTTCCTTGGCCCTGGCAAGCCTCATCGTCATCGCCAACCTGCTCCTGGCCCTAGGCATCGCCCTGGACCGCCACTTGCGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS GCA 72 bp | GGGCCCCCAACACAGCAAGAAGAGCAGTGTGGCTCCTaGCTGTGCCCTAGCCTGCCTCCAGGTGAGAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: GPPTQQEEQCGS*LCPSLPPGESP Trigger: AGGGCTCTCACCTGGAGGCAGGCTAGGGCACAGGCAGGAGCCACACTGCTCTTCTTGCTGTGTTGGGGGCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CAA 72 bp | TGGCGGTCCAGGGCGATGCCTAGGGCCAGGAGCAGGTaGGCGATGACGATGAGGCTTGCCAGGGCCAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: WRSRAMPRARSR*AMTMRLARAKE Trigger: TTCCTTGGCCCTGGCAAGCCTCATCGTCATCGCCAACCTGCTCCTGGCCCTAGGCATCGCCCTGGACCGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS GCA 72 bp | GTAGTAGGCTTAGGAAGAAGCAGCCAGCAGGTGGGCTaGGCAAGTGGCGGTCCAGGGCGATGCCTAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: VVGLGRSSQQVG*ASGGPGRCLGP Trigger: TGGCCCTAGGCATCGCCCTGGACCGCCACTTGCGCAGCCCACCTGCTGGCTGCTTCTTCCTAAGCCTACTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 72 bp | GGGCAGTGGCCAACACGCGGACAGAGAGAAGGGCAGTaGCCCCCACGGCAGGCAACAGGAGGCCATAAACTT | + |
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Preference number: 6 (lower is better) Translates to: GQWPTRGQREGQ*PPRQATGGHKL Trigger: AAGTTTATGGCCTCCTGTTGCCTGCCGTGGGGGCCACTGCCCTTCTCTCTGTCCGCGTGTTGGCCACTGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 72 bp | GGTAGGGGGCTGGGAAGACAGCTTGGGAGCTGCAGTTaGCATCAGGGCTCCAATGGTTCCAGCCCAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GRGLGRQLGSCS*HQGSNGSSPEQ Trigger: CTGCTCTGGGCTGGAACCATTGGAGCCCTGATGCCAACTGCAGCTCCCAAGCTGTCTTCCCAGCCCCCTACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS TCA 72 bp | CAGGCACAGCGGCAGCACTGGTGCTGCCCAATGAGATaGGCGATAACAGAGTTCCAGGCCCTAGTGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QAQRQHWCCPMR*AITEFQALVVG Trigger: GCCCACCACTAGGGCCTGGAACTCTGTTATCGCTCATCTCATTGGGCAGCACCAGTGCTGCCGCTGTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS GCA 72 bp | GGTCAATGCTGCATTGGCTACTGGTGTGGTAGGCAGTaGTGGGGCCTGGATTGTCCCTCTTGGCTCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GQCCIGYWCGRQ*WGLDCPSWLFL Trigger: GAGGAAGAGCCAAGAGGGACAATCCAGGCCCCAGCACTGCCTACCACACCAGTAGCCAATGCAGCATTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 72 bp | GGCGACGCTCATAGGCCAAGACTGACAGGAGCAATGTaGCCACATAGGGCCCCCAACACAGCAAGAAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: GDAHRPRLTGAM*PHRAPNTARRA Trigger: TGCTCTTCTTGCTGTGTTGGGGGCCCTATGTGGCCACATTGCTCCTGTCAGTCTTGGCCTATGAGCGTCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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| CDS CCA 72 bp | TGTGGTAGGCAGTGCTGGGGCCTGGATTGTCCCTCTTaGCTCTTCCTCGAAGCACTCGTAGACACCTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: CGRQCWGLDCPS*LFLEALVDTFG Trigger: CCCAAAGGTGTCTACGAGTGCTTCGAGGAAGAGCCAAGAGGGACAATCCAGGCCCCAGCACTGCCTACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077985.4 |
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