RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPATCH8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034621

Ensembl transcript IDs: ENSMUST00000143842.2

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TATAACAAAGCACGTCAGGGAGACCACTGCAACTGTGCATCCTCCTaGCAGCAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGT +
Preference number: 1 (lower is better)
Translates to: YNKARQGDHCNCASS*QQQPPAAHQPESPS
Trigger: ACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGATGCACAGTTGCAGTGGTCTCCCTGACGTGCTTTGTTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR GCA 90 bp AATGAGCAGAAGGTAGGAGAAGCTCAGGCAGGGACGGGCCTCAAGTaGCCAGCACTCACTTCCCTAACACAGCCCACTCTGCTGGGAATT +
Preference number: 1 (lower is better)
Translates to: NEQKVGEAQAGTGLK*PALTSLTQPTLLGI
Trigger: AATTCCCAGCAGAGTGGGCTGTGTTAGGGAAGTGAGTGCTGGGCACTTGAGGCCCGTCCCTGCCTGAGCTTCTCCTACCTTCTGCTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CCA 90 bp GCTGTCAAGACACTGCCCGTTCCAGCTTTTACCTGCTGGTATAAATaGCTCAACACCCCCAAGGGAAGAACAGGCCACCTTCCCTGGCTC +
Preference number: 1 (lower is better)
Translates to: AVKTLPVPAFTCWYK*LNTPKGRTGHLPWL
Trigger: GAGCCAGGGAAGGTGGCCTGTTCTTCCCTTGGGGGTGTTGAGCCATTTATACCAGCAGGTAAAAGCTGGAACGGGCAGTGTCTTGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR TCA 90 bp CAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGTGCAGGATaGACCAACTACTGCAAATTATTTAACACTGTCCCAGCAAACAAA +
Preference number: 1 (lower is better)
Translates to: QQPPAAHQPESPSAG*TNYCKLFNTVPANK
Trigger: TTTGTTTGCTGGGACAGTGTTAAATAATTTGCAGTAGTTGGTTCATCCTGCACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CCA 90 bp AGAGGATCAGAAAGTAGAGGGAGGAAGGAGGCTTACTTGACAGTCTaGAGATGTTGCTGCAGAGGAGTGTGGGTAGCACTTACTGGTGTT +
Preference number: 1 (lower is better)
Translates to: RGSESRGRKEAYLTV*RCCCRGVWVALTGV
Trigger: AACACCAGTAAGTGCTACCCACACTCCTCTGCAGCAACATCTCCAGACTGTCAAGTAAGCCTCCTTCCTCCCTCTACTTTCTGATCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CCA 90 bp TGCTTCCAGAGAATAAAGCTGTTGAACCAATCCTCCCCTCCTCCATaGAGTCCACGGTTTCTCTGTATAACAAAGCACGTCAGGGAGACC +
Preference number: 1 (lower is better)
Translates to: CFQRIKLLNQSSPPP*SPRFLCITKHVRET
Trigger: GGTCTCCCTGACGTGCTTTGTTATACAGAGAAACCGTGGACTCCATGGAGGAGGGGAGGATTGGTTCAACAGCTTTATTCTCTGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR GCA 90 bp TCCATCCCTGCAAGCCAAAACTCATTTCTTTGGCTGTCAAGACACTaGCCGTTCCAGCTTTTACCTGCTGGTATAAATGGCTCAACACCC +
Preference number: 1 (lower is better)
Translates to: SIPASQNSFLWLSRH*PFQLLPAGINGSTP
Trigger: GGGTGTTGAGCCATTTATACCAGCAGGTAAAAGCTGGAACGGGCAGTGTCTTGACAGCCAAAGAAATGAGTTTTGGCTTGCAGGGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CCA 90 bp ACTCACGATAGGATCTTCTTTTCTGGGATATGTAGATGCCTCTTCTaGGATGAGGGGCATGAGGACAGTAGTGCCAAATGCATGGCTCTG +
Preference number: 1 (lower is better)
Translates to: THDRIFFSGICRCLF*DEGHEDSSAKCMAL
Trigger: CAGAGCCATGCATTTGGCACTACTGTCCTCATGCCCCTCATCCCAGAAGAGGCATCTACATATCCCAGAAAAGAAGATCCTATCGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR GCA 90 bp ACCAGTTCTAGTCATAGGAAGAGCACTAACAAAGGAGATGAGACCTaGATTACAAGCACCTTTGGGTCAGTGTTAAGGAGGGCTGAGAGC +
Preference number: 1 (lower is better)
Translates to: TSSSHRKSTNKGDET*ITSTFGSVLRRAES
Trigger: GCTCTCAGCCCTCCTTAACACTGACCCAAAGGTGCTTGTAATGCAGGTCTCATCTCCTTTGTTAGTGCTCTTCCTATGACTAGAACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR TCA 90 bp AAATGCATGGCTCTGTTTGTAAGGAAAGTGGATCAAATTGCAGCCTaGGTTGCTTTTGGTTCTAGGTTAGACTCCCTCTTCCACCTCACC +
Preference number: 1 (lower is better)
Translates to: KCMALFVRKVDQIAA*VAFGSRLDSLFHLT
Trigger: GGTGAGGTGGAAGAGGGAGTCTAACCTAGAACCAAAAGCAACTCAGGCTGCAATTTGATCCACTTTCCTTACAAACAGAGCCATGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CCA 90 bp AAGTTAAGGAAAACTACCTCCAGGATGGCAGAGGCGGCCAGAGCATaGCTAGATCTACAACCTAACGAGAAGCAGCACAAAAATGTTAAT +
Preference number: 1 (lower is better)
Translates to: KLRKTTSRMAEAARA*LDLQPNEKQHKNVN
Trigger: ATTAACATTTTTGTGCTGCTTCTCGTTAGGTTGTAGATCTAGCCATGCTCTGGCCGCCTCTGCCATCCTGGAGGTAGTTTTCCTTAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR GCA 90 bp ATCCTCCTGACAGCAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGTGCACAGTCTGGAGATGTTaGTGCAGAGGAGTGTGGGTA +
Preference number: 2 (lower is better)
Translates to: ILLTAAAACCSSTRESQCTVWRC*CRGVWV
Trigger: TACCCACACTCCTCTGCAGCAACATCTCCAGACTGT...GCACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR GCA 90 bp ATCCTCCTGACAGCAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGTGCCTTACAGAGGGGAAGTaGAGAGGATCAGAAAGTAGA +
Preference number: 2 (lower is better)
Translates to: ILLTAAAACCSSTRESQCLTEGK*RGSESR
Trigger: TCTACTTTCTGATCCTCTGCACTTCCCCTCTGTAAG...GCACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR TCA 90 bp GCTGAAATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCCCTTTCTCGTGGCACTaGGAAGGCAGGACCAGATGG +
Preference number: 2 (lower is better)
Translates to: AEIAIELGRRHRTLKPKIPFSWH*EGRTRW
Trigger: CCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGG...GATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTATTTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR GCA 90 bp GCTGTTGAACCAATCCTCCCCTCCTCCATGGAGTCCACGGTTTCTCTGTATAACACCCGAGAGTCCCAGTaGAGGATGAACCAACTACTG +
Preference number: 2 (lower is better)
Translates to: AVEPILPSSMESTVSLYNTRESQ*RMNQLL
Trigger: CAGTAGTTGGTTCATCCTGCACTGGGACTCTCGGGT...GTTATACAGAGAAACCGTGGACTCCATGGAGGAGGGGAGGATTGGTTCAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CAA 90 bp TCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAATAAAGCTGTaGAACCAATCCTCCCCTCCTCCATGGAGTCCACGGTTTCTCTGT +
Preference number: 2 (lower is better)
Translates to: SQTITECHCFQRIKL*NQSSPPPWSPRFLC
Trigger: ACAGAGAAACCGTGGACTCCATGGAGGAGGGGAGGATTGGTTCAACAGCTTTATTCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR CCA 90 bp CTGCCGAAAAGTGGAGTTTTCACCACTGAAGAGACAGCCTGGCCTTTCTCGTGGGCTTACTTGACAGTCTaGAGATGTTGCTGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: LPKSGVFTTEETAWPFSWAYLTV*RCCCRG
Trigger: TCCTCTGCAGCAACATCTCCAGACTGTCAAGTAAGC...CCACGAGAAAGGCCAGGCTGTCTCTTCAGTGGTGAAAACTCCACTTTTCGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR CCA 90 bp TTTTCTGGGATATGTAGATGCCTCTTCTGGGATGAGGGGCATGAGGACAGTAGTGAAGGCAGGACCAGATaGGCCCATGGCAAGTGCTTT +
Preference number: 2 (lower is better)
Translates to: FSGICRCLFWDEGHEDSSEGRTR*AHGKCF
Trigger: AAAGCACTTGCCATGGGCCCATCTGGTCCTGCCTTC...ACTACTGTCCTCATGCCCCTCATCCCAGAAGAGGCATCTACATATCCCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR GCA 90 bp TTTTCTGGGATATGTAGATGCCTCTTCTGGGATGAGGGGCATGAGGACAGTAGTGTCTGGAGATGTTGCTaGAGAGGAGTGTGGGTAGCA +
Preference number: 2 (lower is better)
Translates to: FSGICRCLFWDEGHEDSSVWRCC*RGVWVA
Trigger: TGCTACCCACACTCCTCTGCAGCAACATCTCCAGAC...ACTACTGTCCTCATGCCCCTCATCCCAGAAGAGGCATCTACATATCCCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR CCA 90 bp CCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAATATGCTGCAGAGGAGTGTaGGTAGCACTTACTGGTGTT +
Preference number: 2 (lower is better)
Translates to: PKDPFSQTITECHCFQRICCRGV*VALTGV
Trigger: AACACCAGTAAGTGCTACCCACACTCCTCTGCAGCA...TATTCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR CCA 90 bp GCTGAAATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCACCTGCTGGTATAAATaGCTCAACACCCCCAAGGGA +
Preference number: 2 (lower is better)
Translates to: AEIAIELGRRHRTLKPKITCWYK*LNTPKG
Trigger: TCCCTTGGGGGTGTTGAGCCATTTATACCAGCAGGT...GATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTATTTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR CCA 90 bp ATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCTCTCTATGTAGATGCCTCTTCTaGGATGAGGGGCATGAGGAC +
Preference number: 2 (lower is better)
Translates to: IAIELGRRHRTLKPKISLCRCLF*DEGHED
Trigger: GTCCTCATGCCCCTCATCCCAGAAGAGGCATCTACA...TAGAGAGATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR GCA 90 bp ATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCTCTCTATGGGCCCATGGCAAGTaGTTTGGTGACAACCCATTA +
Preference number: 2 (lower is better)
Translates to: IAIELGRRHRTLKPKISLWAHGK*FGDNPL
Trigger: TAATGGGTTGTCACCAAAGCACTTGCCATGGGCCCA...TAGAGAGATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR TCA 90 bp TCCAGGGCTAGTTATCCTAAAAGTGATACTTGTAAGGGGACAATGAGCAGAAGGTGGCAAGTGCTTTGGTaGCAACCCATTAGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: SRASYPKSDTCKGTMSRRWQVLW*QPIRGG
Trigger: TCCTCCTCTAATGGGTTGTCACCAAAGCACTTGCCA...CCTTCTGCTCATTGTCCCCTTACAAGTATCACTTTTAGGATAACTAGCCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR TCA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAATGGAGTTTTCACCACTaGAGAGACAGCCTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQWSFHH*RDSLAF
Trigger: AAAGGCCAGGCTGTCTCTTCAGTGGTGAAAACTCCA...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR CCA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAACTCTTCCACCTCACCTaGGATAACGTGTCACAAACG +
Preference number: 2 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQLFHLT*DNVSQT
Trigger: CGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAG...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CAA 90 bp CATGGCAAGTGCTTTGGTGACAACCCATTAGAGGAGGAAAATGTTTaGAACTTACAGAGGGGAAGTGCAGAGGATCAGAAAGTAGAGGGA +
Preference number: 2 (lower is better)
Translates to: HGKCFGDNPLEEENV*NLQRGSAEDQKVEG
Trigger: TCCCTCTACTTTCTGATCCTCTGCACTTCCCCTCTGTAAGTTCAAAACATTTTCCTCCTCTAATGGGTTGTCACCAAAGCACTTGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR GCA 90 bp TTTTCTGGGATATGTAGATGCCTCTTCTGGGATGAGGGGCATGAGGACAGTAGTGAAAGTGGATCAAATTaGAGCCTGAGTTGCTTTTGG +
Preference number: 2 (lower is better)
Translates to: FSGICRCLFWDEGHEDSSESGSN*SLSCFW
Trigger: CCAAAAGCAACTCAGGCTGCAATTTGATCCACTTTC...ACTACTGTCCTCATGCCCCTCATCCCAGAAGAGGCATCTACATATCCCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR GCA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAAGACAGTAGTGCCAAATaGATGGCTCTGTTTGTAAGG +
Preference number: 2 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQDSSAK*MALFVR
Trigger: CCTTACAAACAGAGCCATGCATTTGGCACTACTGTC...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR CCA 90 bp AGAACTTTGAAGCCAAAAATCTCTCTACCTATAAACGTGCTCACCTCCCAACAACCAGCTTTTACCTGCTaGTATAAATGGCTCAACACC +
Preference number: 2 (lower is better)
Translates to: RTLKPKISLPINVLTSQQPAFTC*YKWLNT
Trigger: GGTGTTGAGCCATTTATACCAGCAGGTAAAAGCTGG...TTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATTTTTGGCTTCAAAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR TCA 72 bp GCACGTCAGGGAGACCACTGCAACTGTGCATCCTCCTaGCAGCAGCAGCCGCCTGCTGCTCATCAACCCGAG +
Preference number: 3 (lower is better)
Translates to: ARQGDHCNCASS*QQQPPAAHQPE
Trigger: CTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGATGCACAGTTGCAGTGGTCTCCCTGACGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR GCA 72 bp GGGAGGAAGGAGGCTTACTTGACAGTCTGGAGATGTTaGTGCAGAGGAGTGTGGGTAGCACTTACTGGTGTT +
Preference number: 3 (lower is better)
Translates to: GRKEAYLTVWRC*CRGVWVALTGV
Trigger: AACACCAGTAAGTGCTACCCACACTCCTCTGCAGCAACATCTCCAGACTGTCAAGTAAGCCTCCTTCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CCA 72 bp ACACTGCCCGTTCCAGCTTTTACCTGCTGGTATAAATaGCTCAACACCCCCAAGGGAAGAACAGGCCACCTT +
Preference number: 3 (lower is better)
Translates to: TLPVPAFTCWYK*LNTPKGRTGHL
Trigger: AAGGTGGCCTGTTCTTCCCTTGGGGGTGTTGAGCCATTTATACCAGCAGGTAAAAGCTGGAACGGGCAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR CAA 90 bp GCTGAAATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCGACAGTCTGGAGATGTaGCTGCAGAGGAGTGTGGGT +
Preference number: 3 (lower is better)
Translates to: AEIAIELGRRHRTLKPKIDSLEM*LQRSVG
Trigger: ACCCACACTCCTCTGCAGCAACATCTCCAGACTGTC...GATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTATTTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR TCA 72 bp GTCAAAGACACTGCCGAAAAGTGGAGTTTTCACCACTaGAGAGACAGCCTGGCCTTTCTCGTGGCACTGAGA +
Preference number: 3 (lower is better)
Translates to: VKDTAEKWSFHH*RDSLAFLVALR
Trigger: TCTCAGTGCCACGAGAAAGGCCAGGCTGTCTCTTCAGTGGTGAAAACTCCACTTTTCGGCAGTGTCTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CCA 72 bp GAAAGTAGAGGGAGGAAGGAGGCTTACTTGACAGTCTaGAGATGTTGCTGCAGAGGAGTGTGGGTAGCACTT +
Preference number: 3 (lower is better)
Translates to: ESRGRKEAYLTV*RCCCRGVWVAL
Trigger: AAGTGCTACCCACACTCCTCTGCAGCAACATCTCCAGACTGTCAAGTAAGCCTCCTTCCTCCCTCTACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CCA 72 bp AAAACTACCTCCAGGATGGCAGAGGCGGCCAGAGCATaGCTAGATCTACAACCTAACGAGAAGCAGCACAAA +
Preference number: 3 (lower is better)
Translates to: KTTSRMAEAARA*LDLQPNEKQHK
Trigger: TTTGTGCTGCTTCTCGTTAGGTTGTAGATCTAGCCATGCTCTGGCCGCCTCTGCCATCCTGGAGGTAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR GCA 72 bp AAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTaGTTCCAGAGAATAAAGCTGTTGAACCAATCCTCC +
Preference number: 3 (lower is better)
Translates to: KDPFSQTITECH*FQRIKLLNQSS
Trigger: GGAGGATTGGTTCAACAGCTTTATTCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CCA 72 bp AGGGGGCTAAATACTAGGAAGGCAAATAAGACTGTCTaGAACAAGGTACCCAGGGAAACCAAAGGACCCCTT +
Preference number: 3 (lower is better)
Translates to: RGLNTRKANKTV*NKVPRETKGPL
Trigger: AAGGGGTCCTTTGGTTTCCCTGGGTACCTTGTTCCAGACAGTCTTATTTGCCTTCCTAGTATTTAGCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR CAA 90 bp GCTGTTGAACCAATCCTCCCCTCCTCCATGGAGTCCACGGTTTCTCTGTATAACGAGGAGGAAAATGTTTaGAACTTACAGAGGGGAAGT +
Preference number: 3 (lower is better)
Translates to: AVEPILPSSMESTVSLYNEEENV*NLQRGS
Trigger: ACTTCCCCTCTGTAAGTTCAAAACATTTTCCTCCTC...GTTATACAGAGAAACCGTGGACTCCATGGAGGAGGGGAGGATTGGTTCAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR GCA 72 bp GCAAGCCAAAACTCATTTCTTTGGCTGTCAAGACACTaGCCGTTCCAGCTTTTACCTGCTGGTATAAATGGC +
Preference number: 3 (lower is better)
Translates to: ASQNSFLWLSRH*PFQLLPAGING
Trigger: GCCATTTATACCAGCAGGTAAAAGCTGGAACGGGCAGTGTCTTGACAGCCAAAGAAATGAGTTTTGGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CCA 72 bp AGAATAAAGCTGTTGAACCAATCCTCCCCTCCTCCATaGAGTCCACGGTTTCTCTGTATAACAAAGCACGTC +
Preference number: 3 (lower is better)
Translates to: RIKLLNQSSPPP*SPRFLCITKHV
Trigger: GACGTGCTTTGTTATACAGAGAAACCGTGGACTCCATGGAGGAGGGGAGGATTGGTTCAACAGCTTTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR CAA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAACCAAAACTCATTTCTTaGGCTGTCAAGACACTGCCC +
Preference number: 3 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQPKLIS*AVKTLP
Trigger: GGGCAGTGTCTTGACAGCCAAAGAAATGAGTTTTGG...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR GCA 72 bp TTCTGGGATGAGGGGCATGAGGACAGTAGTGCCAAATaGATGGCTCTGTTTGTAAGGAAAGTGGATCAAATT +
Preference number: 3 (lower is better)
Translates to: FWDEGHEDSSAK*MALFVRKVDQI
Trigger: AATTTGATCCACTTTCCTTACAAACAGAGCCATGCATTTGGCACTACTGTCCTCATGCCCCTCATCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR TCA 72 bp GCTCTGTTTGTAAGGAAAGTGGATCAAATTGCAGCCTaGGTTGCTTTTGGTTCTAGGTTAGACTCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: ALFVRKVDQIAA*VAFGSRLDSLF
Trigger: GAAGAGGGAGTCTAACCTAGAACCAAAAGCAACTCAGGCTGCAATTTGATCCACTTTCCTTACAAACAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR-3UTR CAA 90 bp AGAACTTTGAAGCCAAAAATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAGGAAAGTGGATCAAATaGCAGCCTGAGTTGCTTTTG +
Preference number: 3 (lower is better)
Translates to: RTLKPKISLPINVLTSQQGKWIK*QPELLL
Trigger: CAAAAGCAACTCAGGCTGCAATTTGATCCACTTTCC...TTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATTTTTGGCTTCAAAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATCCTCCTGACAGCAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGTGCGTGGGGCAAGCAGGGTaGGGTAGAGGGCAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: ILLTAAAACCSSTRESQCVGQAG*GRGQRV
Trigger: CACACGCTGCCCTCTACCCCACCCTGCTTGCCCCAC...GCACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATCCTCCTGACAGCAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGTGCGCTGCTGAATGTGGATaGGCTGCAGGGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ILLTAAAACCSSTRESQCAAECG*AAGLVW
Trigger: CCACACCAGCCCTGCAGCCCATCCACATTCAGCAGC...GCACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp GGCCTTTCTCGTGGCACTGAGAAGGCAGGACCAGATGGGCCCATGGCAAGTGCTCTACCCCCAGGCTCCTaGTTGTTCAGGCTGCTACAG +
Preference number: 4 (lower is better)
Translates to: GLSRGTEKAGPDGPMASALPPGS*LFRLLQ
Trigger: CTGTAGCAGCCTGAACAAGCAGGAGCCTGGGGGTAG...AGCACTTGCCATGGGCCCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp GGCCTTTCTCGTGGCACTGAGAAGGCAGGACCAGATGGGCCCATGGCAAGTGCTTGTGAGGAATGGCGATaGCCAGACCGAGAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: GLSRGTEKAGPDGPMASACEEWR*PDRERL
Trigger: TAGCCGCTCTCGGTCTGGCCATCGCCATTCCTCACA...AGCACTTGCCATGGGCCCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATCCTCCTGACAGCAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGTGCGTGAAGGGCCCAGGATaGATGGCTGAGGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: ILLTAAAACCSSTRESQCVKGPG*MAEAGI
Trigger: AATTCCTGCCTCAGCCATCCATCCTGGGCCCTTCAC...GCACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATCCTCCTGACAGCAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGTGCGATGGGGTGAAGCAGTaGGTGAAGATGGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ILLTAAAACCSSTRESQCDGVKQ*VKMEGC
Trigger: ACAGCCCTCCATCTTCACCCACTGCTTCACCCCATC...GCACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATCCTCCTGACAGCAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGTGCCTCACTGTACTGGGATaGAGACTTCTGGTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: ILLTAAAACCSSTRESQCLTVLG*RLLVQS
Trigger: CGACTGCACCAGAAGTCTCCATCCCAGTACAGTGAG...GCACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATCCTCCTGACAGCAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGTGCCCTCCTCGCACACATTaGGTTTCCTCTCCACTTTCC +
Preference number: 4 (lower is better)
Translates to: ILLTAAAACCSSTRESQCPPRTH*VSSPLS
Trigger: GGAAAGTGGAGAGGAAACCCAATGTGTGCGAGGAGG...GCACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GGCCTTTCTCGTGGCACTGAGAAGGCAGGACCAGATGGGCCCATGGCAAGTGCTCTTCGTTCCATCTTCTaGGCTCCCTTCCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: GLSRGTEKAGPDGPMASALRSIF*APFLCM
Trigger: CATGCAGAGGAAGGGAGCTCAGAAGATGGAACGAAG...AGCACTTGCCATGGGCCCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GGCCTTTCTCGTGGCACTGAGAAGGCAGGACCAGATGGGCCCATGGCAAGTGCTATAGCAGCTCTGGTCTaGAGAGGCATCAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLSRGTEKAGPDGPMASAIAALV*RGIRAA
Trigger: AGCAGCTCTGATGCCTCTTCAGACCAGAGCTGCTAT...AGCACTTGCCATGGGCCCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp GGCCTTTCTCGTGGCACTGAGAAGGCAGGACCAGATGGGCCCATGGCAAGTGCTTGTTTGGCCAGAAGCTaGTGCTGGATGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GLSRGTEKAGPDGPMASACLARS*CWMCCC
Trigger: ACAGCAGCACATCCAGCAGCAGCTTCTGGCCAAACA...AGCACTTGCCATGGGCCCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATCCTCCTGACAGCAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGTGCTGGGAGGTGCATAATTaGGGAAGTGCTCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ILLTAAAACCSSTRESQCWEVHN*GSAQGL
Trigger: CAGACCTTGAGCACTTCCCCAATTATGCACCTCCCA...GCACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGAGCTGCAGGGCTGGTGTaGCTGGAGCTAGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRAAGLV*LELGRW
Trigger: CCACCGCCCTAGCTCCAGCCACACCAGCCCTGCAGC...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GGCCTTTCTCGTGGCACTGAGAAGGCAGGACCAGATGGGCCCATGGCAAGTGCTGTGGCCAGGGATAATTaGGTGAGTGAGATGGGACAA +
Preference number: 4 (lower is better)
Translates to: GLSRGTEKAGPDGPMASAVARDN*VSEMGQ
Trigger: TTGTCCCATCTCACTCACTCAATTATCCCTGGCCAC...AGCACTTGCCATGGGCCCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGATCGGTGGTGCCGGGCTaGCGCTTCCAGGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRSVVPG*RFQEVL
Trigger: CAGAACCTCCTGGAAGCGGCAGCCCGGCACCACCGA...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp GGCCTTTCTCGTGGCACTGAGAAGGCAGGACCAGATGGGCCCATGGCAAGTGCTCAGGAGGTTCTGATTTaGGTCCGCGTTCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: GLSRGTEKAGPDGPMASAQEVLI*VRVQNQ
Trigger: CTGATTCTGAACGCGGACCCAAATCAGAACCTCCTG...AGCACTTGCCATGGGCCCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp GAAGTTAAGGAAAACTACCTCCAGGATGGCAGAGGCGGCCAGAGCATGGCTAGATCACCACTACTGGGTTaGCTCCGATGGCTGGACCGG +
Preference number: 4 (lower is better)
Translates to: EVKENYLQDGRGGQSMARSPLLG*LRWLDR
Trigger: CCGGTCCAGCCATCGGAGCCAACCCAGTAGTGGTGA...TCTAGCCATGCTCTGGCCGCCTCTGCCATCCTGGAGGTAGTTTTCCTTAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp CCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAATAAGTCTCGGTCCTCGTTaGAGCGGGAGAAGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: PKDPFSQTITECHCFQRISLGPR*SGRSGP
Trigger: CGGACCGCTTCTCCCGCTTCAACGAGGACCGAGACT...TATTCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp CTGCCGAAAAGTGGAGTTTTCACCACTGAAGAGACAGCCTGGCCTTTCTCGTGGTCCACAGGGCCTGGTTaGCTGCCACTATCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LPKSGVFTTEETAWPFSWSTGPG*LPLSRD
Trigger: GTCTCTGGATAGTGGCAGTCAACCAGGCCCTGTGGA...CCACGAGAAAGGCCAGGCTGTCTCTTCAGTGGTGAAAACTCCACTTTTCGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GCTGTTGAACCAATCCTCCCCTCCTCCATGGAGTCCACGGTTTCTCTGTATAACGCAGCGGCTGCAGCATaGTGCTGTAGGATGGCATGC +
Preference number: 4 (lower is better)
Translates to: AVEPILPSSMESTVSLYNAAAAA*CCRMAC
Trigger: GCATGCCATCCTACAGCATCATGCTGCAGCCGCTGC...GTTATACAGAGAAACCGTGGACTCCATGGAGGAGGGGAGGATTGGTTCAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp ATCCTCCTGACAGCAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGTGCCCAGGGATAATTGAGTaGGTGAGATGGGACAAAGAA +
Preference number: 4 (lower is better)
Translates to: ILLTAAAACCSSTRESQCPGIIE*VRWDKE
Trigger: TTCTTTGTCCCATCTCACTCACTCAATTATCCCTGG...GCACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GGCCTTTCTCGTGGCACTGAGAAGGCAGGACCAGATGGGCCCATGGCAAGTGCTCCTCTGCATGGTCCTTaGAAACGGATGCTATTGATT +
Preference number: 4 (lower is better)
Translates to: GLSRGTEKAGPDGPMASAPLHGP*KRMLLI
Trigger: AATCAATAGCATCCGTTTTCAAGGACCATGCAGAGG...AGCACTTGCCATGGGCCCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GCTGAAATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCGCGTGTGGGACGGGATaGAAGGTGAAGGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AEIAIELGRRHRTLKPKIACGTG*KVKGPG
Trigger: TCCTGGGCCCTTCACCTTTCATCCCGTCCCACACGC...GATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTATTTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp GGCCTTTCTCGTGGCACTGAGAAGGCAGGACCAGATGGGCCCATGGCAAGTGCTTCAGCTTGTTTTCTTTaGTCTGCCAACTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: GLSRGTEKAGPDGPMASASACFL*SANSWS
Trigger: GCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGA...AGCACTTGCCATGGGCCCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp CTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGACACTGCCGAAAAGTGCAGTGTGGGCTGGGGTaGCTAGCGGAGCCACAGAGT +
Preference number: 4 (lower is better)
Translates to: LTWDNVSQTDSQRHCRKVQCGLG*LAEPQS
Trigger: ACTCTGTGGCTCCGCTAGGCACCCCAGCCCACACTG...CACTTTTCGGCAGTGTCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp ATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCTCTCTAGGGGGTGAGGGTGAATaGCAATGGCGGCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: IAIELGRRHRTLKPKISLGGEGE*QWRQQR
Trigger: CCGCTGCTGCCGCCATTGGCATTCACCCTCACCCCC...TAGAGAGATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp CTGCCGAAAAGTGGAGTTTTCACCACTGAAGAGACAGCCTGGCCTTTCTCGTGGGTGTTAGCTCTCCGCTaGCAGGAGGAAGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LPKSGVFTTEETAWPFSWVLALR*QEEVGG
Trigger: ACCACCAACTTCCTCCTGCCAGCGGAGAGCTAACAC...CCACGAGAAAGGCCAGGCTGTCTCTTCAGTGGTGAAAACTCCACTTTTCGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp AAACCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAGCCAGAAGCTGCTGCTaGATGTGCTGCTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KPKDPFSQTITECHCFQRARSCC*MCCCAA
Trigger: GGCTGCACAGCAGCACATCCAGCAGCAGCTTCTGGC...TCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp CCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAATACTGGAGCTAGGGCGGTaGAGGCTGGAAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PKDPFSQTITECHCFQRILELGR*RLERPS
Trigger: TGAAGGCCTTTCCAGCCTCCACCGCCCTAGCTCCAG...TATTCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp GAAGTTAAGGAAAACTACCTCCAGGATGGCAGAGGCGGCCAGAGCATGGCTAGAGTAGAGGGCAGCGTGTaGGACGGGATGAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: EVKENYLQDGRGGQSMARVEGSV*DGMKGE
Trigger: TTCACCTTTCATCCCGTCCCACACGCTGCCCTCTAC...TCTAGCCATGCTCTGGCCGCCTCTGCCATCCTGGAGGTAGTTTTCCTTAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGAGCTACAGGCAGCCCCTaGTGCAGGTTCATCCACTCT +
Preference number: 4 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRATGSP*CRFIHS
Trigger: AGAGTGGATGAACCTGCATCAGGGGCTGCCTGTAGC...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGAGATCGCTCCCTTGTATaGCTCCGAGATCGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRDRSLV*LRDRLR
Trigger: CCGAAGCCGATCTCGGAGTCATACAAGGGAGCGATC...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GCTGAAATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCCTGGAGCCTGATCTCTaGGAAGGGCTCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AEIAIELGRRHRTLKPKILEPDL*EGLLVL
Trigger: CAGCACCAGGAGCCCTTCTCAGAGATCAGGCTCCAG...GATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTATTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GCTGTTGAACCAATCCTCCCCTCCTCCATGGAGTCCACGGTTTCTCTGTATAACACTGCAGTCACTTTCTaGCCCCCTTCCTGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: AVEPILPSSMESTVSLYNTAVTF*PPSCAS
Trigger: ACTGGCACAGGAAGGGGGTCAGAAAGTGACTGCAGT...GTTATACAGAGAAACCGTGGACTCCATGGAGGAGGGGAGGATTGGTTCAACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp GCTGTTGAACCAATCCTCCCCTCCTCCATGGAGTCCACGGTTTCTCTGTATAACTGCCCCTGGGCTTGCTaGTGTCTTACTACAGCCTTG +
Preference number: 4 (lower is better)
Translates to: AVEPILPSSMESTVSLYNCPWAC*CLTTAL
Trigger: CAAGGCTGTAGTAAGACAGCAGCAAGCCCAGGGGCA...GTTATACAGAGAAACCGTGGACTCCATGGAGGAGGGGAGGATTGGTTCAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp CTGCCGAAAAGTGGAGTTTTCACCACTGAAGAGACAGCCTGGCCTTTCTCGTGGCTACTCTCTACACTCTaGTCATCTTCCCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LPKSGVFTTEETAWPFSWLLSTL*SSSPPP
Trigger: CGGAGGAGGGGAAGATGAGCAGAGTGTAGAGAGTAG...CCACGAGAAAGGCCAGGCTGTCTCTTCAGTGGTGAAAACTCCACTTTTCGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp CCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAATAAGCTGTGGGCTGTGGTaGTGCGACTTCTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PKDPFSQTITECHCFQRISCGLW*CDFSSC
Trigger: GCAAGAGGAGAAGTCGCAGCACCACAGCCCACAGCT...TATTCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp TTTTCTGGGATATGTAGATGCCTCTTCTGGGATGAGGGGCATGAGGACAGTAGTAGCTGCTGCTGGATGTaGTGCTGTGCAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FSGICRCLFWDEGHEDSSSCCWM*CCAACW
Trigger: CCAGCAGGCTGCACAGCAGCACATCCAGCAGCAGCT...ACTACTGTCCTCATGCCCCTCATCCCAGAAGAGGCATCTACATATCCCAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp GAAGTTAAGGAAAACTACCTCCAGGATGGCAGAGGCGGCCAGAGCATGGCTAGACCAAAGCTAATACCTTaGGAGGCTAAGCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: EVKENYLQDGRGGQSMARPKLIP*EAKPGA
Trigger: GGCTCCTGGCTTAGCCTCCCAAGGTATTAGCTTTGG...TCTAGCCATGCTCTGGCCGCCTCTGCCATCCTGGAGGTAGTTTTCCTTAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAATCTGAGAAGGGCTCCTaGTGCTGCGGCTCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQSEKGS*CCGSGP
Trigger: GGGACCGGAGCCGCAGCACCAGGAGCCCTTCTCAGA...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp CTTTTACCTGCTGGTATAAATGGCTCAACACCCCCAAGGGAAGAACAGGCCACCGTTATGGGAGATGGCTaGATCCCCAGGGTAGCAGTC +
Preference number: 4 (lower is better)
Translates to: LLPAGINGSTPPREEQATVMGDG*IPRVAV
Trigger: GACTGCTACCCTGGGGATCCAGCCATCTCCCATAAC...GGTGGCCTGTTCTTCCCTTGGGGGTGTTGAGCCATTTATACCAGCAGGTAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp CTTTTACCTGCTGGTATAAATGGCTCAACACCCCCAAGGGAAGAACAGGCCACCGGTAGTTATGGGAGATaGCTGGATCCCCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LLPAGINGSTPPREEQATGSYGR*LDPQGS
Trigger: GCTACCCTGGGGATCCAGCCATCTCCCATAACTACC...GGTGGCCTGTTCTTCCCTTGGGGGTGTTGAGCCATTTATACCAGCAGGTAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp GAAGTTAAGGAAAACTACCTCCAGGATGGCAGAGGCGGCCAGAGCATGGCTAGAAGGCCTTCACTTGTTTaGCCAGAAGCTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: EVKENYLQDGRGGQSMARRPSLV*PEAAAG
Trigger: TCCAGCAGCAGCTTCTGGCCAAACAAGTGAAGGCCT...TCTAGCCATGCTCTGGCCGCCTCTGCCATCCTGGAGGTAGTTTTCCTTAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp CCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAATAAGGTGGCAGAGGCTGTaGCTGGCTGCTGAATGTGGA +
Preference number: 4 (lower is better)
Translates to: PKDPFSQTITECHCFQRIRWQRL*LAAECG
Trigger: TCCACATTCAGCAGCCAGCCACAGCCTCTGCCACCT...TATTCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CAA 72 bp AGGGAGGAAGGAGGCTTACTTGACAGTCTGGAGATGTaGCTGCAGAGGAGTGTGGGTAGCACTTACTGGTGT +
Preference number: 4 (lower is better)
Translates to: REEGGLLDSLEM*LQRSVGSTYWC
Trigger: ACACCAGTAAGTGCTACCCACACTCCTCTGCAGCAACATCTCCAGACTGTCAAGTAAGCCTCCTTCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
3UTR CAA 72 bp ATCACCGAGTGTCACTGCTTCCAGAGAATAAAGCTGTaGAACCAATCCTCCCCTCCTCCATGGAGTCCACGG +
Preference number: 4 (lower is better)
Translates to: ITECHCFQRIKL*NQSSPPPWSPR
Trigger: CCGTGGACTCCATGGAGGAGGGGAGGATTGGTTCAACAGCTTTATTCTCTGGAAGCAGTGACACTCGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp AAACCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGATCAAGGCTCTGGAGATaGTCCTTTGAGGAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: KPKDPFSQTITECHCFQRSRLWR*SFEEPA
Trigger: CGCAGGCTCCTCAAAGGATCATCTCCAGAGCCTTGA...TCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GCTGTTGAACCAATCCTCCCCTCCTCCATGGAGTCCACGGTTTCTCTGTATAACCTGGTGCAGTCGGTGTaGGGAAGCATCATCACTATC +
Preference number: 4 (lower is better)
Translates to: AVEPILPSSMESTVSLYNLVQSV*GSIITI
Trigger: GATAGTGATGATGCTTCCTCACACCGACTGCACCAG...GTTATACAGAGAAACCGTGGACTCCATGGAGGAGGGGAGGATTGGTTCAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp CTTTTACCTGCTGGTATAAATGGCTCAACACCCCCAAGGGAAGAACAGGCCACCCAGCCTGCTGGAGCTTaGTGTACTTCTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: LLPAGINGSTPPREEQATQPAGA*CTSPSP
Trigger: AGGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTG...GGTGGCCTGTTCTTCCCTTGGGGGTGTTGAGCCATTTATACCAGCAGGTAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp GAAGTTAAGGAAAACTACCTCCAGGATGGCAGAGGCGGCCAGAGCATGGCTAGACTCCCTTCCTCTGCATaGTCCTTGAAAACGGATGCT +
Preference number: 4 (lower is better)
Translates to: EVKENYLQDGRGGQSMARLPSSA*SLKTDA
Trigger: AGCATCCGTTTTCAAGGACCATGCAGAGGAAGGGAG...TCTAGCCATGCTCTGGCCGCCTCTGCCATCCTGGAGGTAGTTTTCCTTAACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp CTGCCGAAAAGTGGAGTTTTCACCACTGAAGAGACAGCCTGGCCTTTCTCGTGGTACAGCCTTGCGGCTTaGGAGAGCTGCTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LPKSGVFTTEETAWPFSWYSLAA*ESCFFC
Trigger: ACAGAAAAAGCAGCTCTCCCAAGCCGCAAGGCTGTA...CCACGAGAAAGGCCAGGCTGTCTCTTCAGTGGTGAAAACTCCACTTTTCGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp GCTGAAATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCCCTCATCACCACTACTaGGTTGGCTCCGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: AEIAIELGRRHRTLKPKIPHHHY*VGSDGW
Trigger: CCAGCCATCGGAGCCAACCCAGTAGTGGTGATGAGG...GATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTATTTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGATGCTGTGCAGCCTGCTaGAGCTTGCTGTACTTCTCC +
Preference number: 4 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRCCAAC*SLLYFS
Trigger: GGAGAAGTACAGCAAGCTCCAGCAGGCTGCACAGCA...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GCTGTTGAACCAATCCTCCCCTCCTCCATGGAGTCCACGGTTTCTCTGTATAACAGTGTCTTCAGTTTCTaGCATATGGCTACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AVEPILPSSMESTVSLYNSVFSF*HMATPR
Trigger: CCTGGGGGTAGCCATATGTCAGAAACTGAAGACACT...GTTATACAGAGAAACCGTGGACTCCATGGAGGAGGGGAGGATTGGTTCAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp TCCAGGGCTAGTTATCCTAAAAGTGATACTTGTAAGGGGACAATGAGCAGAAGGCCGGGAGGAACGATGTaGGGAATGGCGATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SRASYPKSDTCKGTMSRRPGGTM*GMAMAR
Trigger: TCTGGCCATCGCCATTCCTCACATCGTTCCTCCCGG...CCTTCTGCTCATTGTCCCCTTACAAGTATCACTTTTAGGATAACTAGCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp CCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAATAGGGACTGGCTGCAACTaGGGCTATAGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: PKDPFSQTITECHCFQRIGTGCN*GYSHHQ
Trigger: CTGATGATGACTATAGCCTCAGTTGCAGCCAGTCCC...TATTCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp TCCAGGGCTAGTTATCCTAAAAGTGATACTTGTAAGGGGACAATGAGCAGAAGGGGACGGGATGAAAGGTaGAGGGCCCAGGATGGATGG +
Preference number: 4 (lower is better)
Translates to: SRASYPKSDTCKGTMSRRGRDER*RAQDGW
Trigger: CCATCCATCCTGGGCCCTTCACCTTTCATCCCGTCC...CCTTCTGCTCATTGTCCCCTTACAAGTATCACTTTTAGGATAACTAGCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp CTTTGGCTGTCAAGACACTGCCCGTTCCAGCTTTTACCTGCTGGTATAAATGGCGTCTTACTACAGCCTTaGGGCTTGGGAGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LWLSRHCPFQLLPAGINGVLLQP*GLGELL
Trigger: AAGCAGCTCTCCCAAGCCGCAAGGCTGTAGTAAGAC...GCCATTTATACCAGCAGGTAAAAGCTGGAACGGGCAGTGTCTTGACAGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp GAAGTTAAGGAAAACTACCTCCAGGATGGCAGAGGCGGCCAGAGCATGGCTAGAGCCACTGGAGGGCAGTaGTTTCATCCTTGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: EVKENYLQDGRGGQSMARATGGQ*FHPCLK
Trigger: TTTTAAGCAAGGATGAAAGCACTGCCCTCCAGTGGC...TCTAGCCATGCTCTGGCCGCCTCTGCCATCCTGGAGGTAGTTTTCCTTAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp GAAGTTAAGGAAAACTACCTCCAGGATGGCAGAGGCGGCCAGAGCATGGCTAGAGAGAGCACTACATCCTaGTCCTCTTCCTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: EVKENYLQDGRGGQSMARESTTS*SSSWLL
Trigger: TAAAAGCCAGGAAGAGGAGCAGGATGTAGTGCTCTC...TCTAGCCATGCTCTGGCCGCCTCTGCCATCCTGGAGGTAGTTTTCCTTAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp CTTTGGCTGTCAAGACACTGCCCGTTCCAGCTTTTACCTGCTGGTATAAATGGCGATGGAGACTTCTGGTaGAGTCGGTGTGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LWLSRHCPFQLLPAGINGDGDFW*SRCEEA
Trigger: TGCTTCCTCACACCGACTGCACCAGAAGTCTCCATC...GCCATTTATACCAGCAGGTAAAAGCTGGAACGGGCAGTGTCTTGACAGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp AAACCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAGAGCGGCTACGAGAATaGTCACTACCGGAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KPKDPFSQTITECHCFQRERLRE*SLPESS
Trigger: TGAAGACTCCGGTAGTGAGCATTCTCGTAGCCGCTC...TCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAATGCTGCTGGATGTGCTaGTGTGCAGCCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQCCWMC*CAACWS
Trigger: GCTCCAGCAGGCTGCACAGCAGCACATCCAGCAGCA...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAACGTCTACAGCCACCGTaGTTGGTCGGAACATGGGCC +
Preference number: 4 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQRLQPP*LVGTWA
Trigger: GGCCCATGTTCCGACCAACCACGGTGGCTGTAGACG...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCTCTCTAGTTGGCTCCGATGGCTaGACCGGCTGCTATGTTTGG +
Preference number: 4 (lower is better)
Translates to: IAIELGRRHRTLKPKISLVGSDG*TGCYVW
Trigger: CCAAACATAGCAGCCGGTCCAGCCATCGGAGCCAAC...TAGAGAGATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAACTGGGTTGGCTCCGATaGCTGGACCGGCTGCTATGT +
Preference number: 4 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQLGWLR*LDRLLC
Trigger: ACATAGCAGCCGGTCCAGCCATCGGAGCCAACCCAG...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp GAAGTTAAGGAAAACTACCTCCAGGATGGCAGAGGCGGCCAGAGCATGGCTAGATCCACTTTCCTGGACTaGATCTTCTCTAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: EVKENYLQDGRGGQSMARSTFLD*IFSSSS
Trigger: ACTGCTGCTAGAGAAGATCCAGTCCAGGAAAGTGGA...TCTAGCCATGCTCTGGCCGCCTCTGCCATCCTGGAGGTAGTTTTCCTTAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGAAGAGCGGTAGATCTTTaGACGAATGAAATCCCGGCG +
Preference number: 4 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRRAVDL*TNEIPA
Trigger: CGCCGGGATTTCATTCGTTCAAAGATCTACCGCTCT...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GCTGAAATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCCCCTTCTTCTGGCTCTaGATGTTCCTGCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AEIAIELGRRHRTLKPKIPFFWL*MFLLFS
Trigger: GGAGAAGAGCAGGAACATTCAGAGCCAGAAGAAGGG...GATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTATTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp AAACCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGACCCAGGATGGATGGCTaGGGCAGGAATTATATGGAT +
Preference number: 4 (lower is better)
Translates to: KPKDPFSQTITECHCFQRPRMDG*GRNYMD
Trigger: ATCCATATAATTCCTGCCTCAGCCATCCATCCTGGG...TCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp TCCAGGGCTAGTTATCCTAAAAGTGATACTTGTAAGGGGACAATGAGCAGAAGGCTGCAGGTCCTGACCTaGGAAGATGGGGTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SRASYPKSDTCKGTMSRRLQVLT*EDGVKQ
Trigger: CTGCTTCACCCCATCTTCTCAGGTCAGGACCTGCAG...CCTTCTGCTCATTGTCCCCTTACAAGTATCACTTTTAGGATAACTAGCCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp CTTTTACCTGCTGGTATAAATGGCTCAACACCCCCAAGGGAAGAACAGGCCACCTCTTATCTTCAGGACTaGAGTCACTTTCTGACCCCC +
Preference number: 4 (lower is better)
Translates to: LLPAGINGSTPPREEQATSYLQD*SHFLTP
Trigger: GGGGGTCAGAAAGTGACTGCAGTCCTGAAGATAAGA...GGTGGCCTGTTCTTCCCTTGGGGGTGTTGAGCCATTTATACCAGCAGGTAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp TTTTCTGGGATATGTAGATGCCTCTTCTGGGATGAGGGGCATGAGGACAGTAGTTTCCCCACTGGGAGGTaGATAATTGGGGAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: FSGICRCLFWDEGHEDSSFPTGR*IIGEVL
Trigger: GAGCACTTCCCCAATTATGCACCTCCCAGTGGGGAA...ACTACTGTCCTCATGCCCCTCATCCCAGAAGAGGCATCTACATATCCCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATCCCTGATAGTAAACCCAAAGCAAACCTCAAATCTAAATCCATCCCTGCAAGCCTTCGCTGCCAGCTGTaGGCTGTGGTGCTGCGACTT +
Preference number: 4 (lower is better)
Translates to: IPDSKPKANLKSKSIPASLRCQL*AVVLRL
Trigger: AAGTCGCAGCACCACAGCCCACAGCTGGCAGCGAAG...GCTTGCAGGGATGGATTTAGATTTGAGGTTTGCTTTGGGTTTACTATCAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp TTTTCTGGGATATGTAGATGCCTCTTCTGGGATGAGGGGCATGAGGACAGTAGTGGACTTCCGGGTAGCTaGAAGCTTCCCTATCATTGG +
Preference number: 4 (lower is better)
Translates to: FSGICRCLFWDEGHEDSSGLPGS*KLPYHW
Trigger: CCAATGATAGGGAAGCTTCCAGCTACCCGGAAGTCC...ACTACTGTCCTCATGCCCCTCATCCCAGAAGAGGCATCTACATATCCCAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAAGTGAAGGTGATGGGCTaGCTCTCGAGAGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQVKVMG*LSRGAK
Trigger: CTTGGCTCCTCTCGAGAGCCAGCCCATCACCTTCAC...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGAGTCTTTGCGGGATCTTaGAGAGACATTTCGGGCAAA +
Preference number: 4 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRVFAGS*RDISGK
Trigger: TTTGCCCGAAATGTCTCTTCAAGATCCCGCAAAGAC...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAACAACTTGGACAGTGTTaGGGCAAGGGACCCTCCATC +
Preference number: 4 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQQLGQC*GKGPSI
Trigger: GATGGAGGGTCCCTTGCCTCAACACTGTCCAAGTTG...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp CTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGACACTGCCGAAAAGTGGTTGCTGGGGTGGCCTaGGAAATGTCTTTAGGATTG +
Preference number: 4 (lower is better)
Translates to: LTWDNVSQTDSQRHCRKVVAGVA*EMSLGL
Trigger: CAATCCTAAAGACATTTCTCAGGCCACCCCAGCAAC...CACTTTTCGGCAGTGTCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp CTTTGGCTGTCAAGACACTGCCCGTTCCAGCTTTTACCTGCTGGTATAAATGGCTCTGTGAGACTTGCCTaGTGGTTCTTTCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LWLSRHCPFQLLPAGINGSVRLA*WFFLAR
Trigger: CCTAGCAAGAAAGAACCATCAGGCAAGTCTCACAGA...GCCATTTATACCAGCAGGTAAAAGCTGGAACGGGCAGTGTCTTGACAGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp TTTTCTGGGATATGTAGATGCCTCTTCTGGGATGAGGGGCATGAGGACAGTAGTCTTAGAGTGCCTTCGTaGTCGGTCGCTATAGTCACT +
Preference number: 4 (lower is better)
Translates to: FSGICRCLFWDEGHEDSSLRVPS*SVAIVT
Trigger: AGTGACTATAGCGACCGATCACGAAGGCACTCTAAG...ACTACTGTCCTCATGCCCCTCATCCCAGAAGAGGCATCTACATATCCCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp ATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCTCTCTATGTAGGATGGCATGCTaGACAGTGGTGATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: IAIELGRRHRTLKPKISLCRMAC*TVVMEV
Trigger: CACCTCCATCACCACTGTTCAGCATGCCATCCTACA...TAGAGAGATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp TTTTCTGGGATATGTAGATGCCTCTTCTGGGATGAGGGGCATGAGGACAGTAGTTTGTTTTCTTTGCTCTaGCAACTCATGGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: FSGICRCLFWDEGHEDSSLFSLL*QLMEPP
Trigger: CGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAA...ACTACTGTCCTCATGCCCCTCATCCCAGAAGAGGCATCTACATATCCCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGACAGGTTCATCCACTCTaGCTTCTGAAGAGAGCACTA +
Preference number: 4 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRQVHPL*LLKRAL
Trigger: TAGTGCTCTCTTCAGAAGGCAGAGTGGATGAACCTG...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp CCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAATAGGCTCTGAATGTTCCTaGTCTTCTCCCCTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: PKDPFSQTITECHCFQRIGSECS*SSPLSK
Trigger: CTTAGAAAGGGGAGAAGAGCAGGAACATTCAGAGCC...TATTCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAATGCTGCTGTGCAGCCTaGTGGAGCTTGCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQCCCAA*WSLLYF
Trigger: GAAGTACAGCAAGCTCCAGCAGGCTGCACAGCAGCA...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp ATCCCTGATAGTAAACCCAAAGCAAACCTCAAATCTAAATCCATCCCTGCAAGCCTGGATGTGCTGCTGTaGAGCCTGCTGGAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: IPDSKPKANLKSKSIPASLDVLL*SLLELA
Trigger: AGCAAGCTCCAGCAGGCTGCACAGCAGCACATCCAG...GCTTGCAGGGATGGATTTAGATTTGAGGTTTGCTTTGGGTTTACTATCAGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp AAACCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAGTAGTGGTAATATTCTaGCTCTGTAGCCCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: KPKDPFSQTITECHCFQRVVVIF*LCSPCS
Trigger: GGAACAGGGGCTACAGAGCCAGAATATTACCACTAC...TCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp GCTGAAATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCGACCTTGCAGTGTGCTaGGGGGATGTAGTGGTAATA +
Preference number: 4 (lower is better)
Translates to: AEIAIELGRRHRTLKPKIDLAVC*GDVVVI
Trigger: TATTACCACTACATCCCCCCAGCACACTGCAAGGTC...GATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTATTTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCTCTCTATCAGTTTCTGACATATaGCTACCCCCAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IAIELGRRHRTLKPKISLSVSDI*LPPGSC
Trigger: GCAGGAGCCTGGGGGTAGCCATATGTCAGAAACTGA...TAGAGAGATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp CTTTTACCTGCTGGTATAAATGGCTCAACACCCCCAAGGGAAGAACAGGCCACCTCTTTCTTGCTAGGATaGCTTCTCCCAGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLPAGINGSTPPREEQATSFLLG*LLPVSS
Trigger: TGAAGACACTGGGAGAAGCCATCCTAGCAAGAAAGA...GGTGGCCTGTTCTTCCCTTGGGGGTGTTGAGCCATTTATACCAGCAGGTAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp AAACCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGACCCAAAGTAACCTTGTaGGGGGTTCTTGTACTTGAG +
Preference number: 4 (lower is better)
Translates to: KPKDPFSQTITECHCFQRPKVTL*GVLVLE
Trigger: CTCAAGTACAAGAACCCCCCACAAGGTTACTTTGGG...TCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp AGAACTTTGAAGCCAAAAATCTCTCTACCTATAAACGTGCTCACCTCCCAACAACATGCTGAACAGTGGTaGTGGAGGTGGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RTLKPKISLPINVLTSQQHAEQW*WRWQRL
Trigger: CAGCCTCTGCCACCTCCATCACCACTGTTCAGCATG...TTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATTTTTGGCTTCAAAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp CTTTTACCTGCTGGTATAAATGGCTCAACACCCCCAAGGGAAGAACAGGCCACCCGGGCAAACTCTCTCTaGTTGAGATCTTTTAATCTC +
Preference number: 4 (lower is better)
Translates to: LLPAGINGSTPPREEQATRANSL*LRSFNL
Trigger: GAGATTAAAAGATCTCAAGCAGAGAGAGTTTGCCCG...GGTGGCCTGTTCTTCCCTTGGGGGTGTTGAGCCATTTATACCAGCAGGTAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp CTTTTACCTGCTGGTATAAATGGCTCAACACCCCCAAGGGAAGAACAGGCCACCGTTTCTTCTCGTCTTTaGGGGATCTTGAAGAGACAT +
Preference number: 4 (lower is better)
Translates to: LLPAGINGSTPPREEQATVSSRL*GILKRH
Trigger: ATGTCTCTTCAAGATCCCGCAAAGACGAGAAGAAAC...GGTGGCCTGTTCTTCCCTTGGGGGTGTTGAGCCATTTATACCAGCAGGTAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp AGAACTTTGAAGCCAAAAATCTCTCTACCTATAAACGTGCTCACCTCCCAACAACCTGCTTGTTCAGGCTaGTACAGGCAGCCCCTGATG +
Preference number: 4 (lower is better)
Translates to: RTLKPKISLPINVLTSQQPACSG*YRQPLM
Trigger: CATCAGGGGCTGCCTGTAGCAGCCTGAACAAGCAGG...TTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATTTTTGGCTTCAAAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp ATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCTCTCTATGTGATCTTGGCAACTaGTACCACCCCCACCATCAT +
Preference number: 4 (lower is better)
Translates to: IAIELGRRHRTLKPKISLCDLGN*YHPHHH
Trigger: ATGATGGTGGGGGTGGTAGCAGTTGCCAAGATCACA...TAGAGAGATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp ATCCCTGATAGTAAACCCAAAGCAAACCTCAAATCTAAATCCATCCCTGCAAGCTTGGCCAGAAGCTGCTaGTGGATGTGCTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: IPDSKPKANLKSKSIPASLARSC*WMCCCA
Trigger: TGCACAGCAGCACATCCAGCAGCAGCTTCTGGCCAA...GCTTGCAGGGATGGATTTAGATTTGAGGTTTGCTTTGGGTTTACTATCAGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp CCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAATATCCCAATTTCTGCAGTaGGGGTCCCAGATTATTCTT +
Preference number: 4 (lower is better)
Translates to: PKDPFSQTITECHCFQRISQFLQ*GSQIIL
Trigger: AAGAATAATCTGGGACCCCCACTGCAGAAATTGGGA...TATTCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCTCTCTAACCTTCTGCACCCCTTaGTCAGAGCTCTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: IAIELGRRHRTLKPKISLTFCTP*SELFSS
Trigger: TGATGAGAAGAGCTCTGACCAAGGGGTGCAGAAGGT...TAGAGAGATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp AGAACTTTGAAGCCAAAAATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAGGATGCTTGGGTCCCTaGCCTGCTTTTGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTLKPKISLPINVLTSQQGCLGP*PAFVAG
Trigger: CCCAGCAACAAAAGCAGGCCAGGGACCCAAGCATCC...TTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATTTTTGGCTTCAAAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp TTTTCTGGGATATGTAGATGCCTCTTCTGGGATGAGGGGCATGAGGACAGTAGTGCCTGCGACATCTTTTaGCTTTTCTGTCCCTTTAGC +
Preference number: 4 (lower is better)
Translates to: FSGICRCLFWDEGHEDSSACDIF*LFCPFS
Trigger: GCTAAAGGGACAGAAAAGCCAAAAGATGTCGCAGGC...ACTACTGTCCTCATGCCCCTCATCCCAGAAGAGGCATCTACATATCCCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAATGGGATGGAGACTTCTaGTGCAGTCGGTGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQWDGDF*CSRCEE
Trigger: TTCCTCACACCGACTGCACCAGAAGTCTCCATCCCA...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp ATCCCTGATAGTAAACCCAAAGCAAACCTCAAATCTAAATCCATCCCTGCAAGCGGGTCTGTTCTCCCCTaGAGAGATTTTCCCAATCCC +
Preference number: 4 (lower is better)
Translates to: IPDSKPKANLKSKSIPASGSVLP*RDFPNP
Trigger: GGGATTGGGAAAATCTCTTCAGGGGAGAACAGACCC...GCTTGCAGGGATGGATTTAGATTTGAGGTTTGCTTTGGGTTTACTATCAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGAAGTAAAAGTTGGCTCTaGGATCTTCCAAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRSKSWL*DLPRLL
Trigger: CAAAAGCCTTGGAAGATCTCAGAGCCAACTTTTACT...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp TTTTCTGGGATATGTAGATGCCTCTTCTGGGATGAGGGGCATGAGGACAGTAGTTTCTTCTTGTGTCTGTaGGACTTGCCTGATGGTTCT +
Preference number: 4 (lower is better)
Translates to: FSGICRCLFWDEGHEDSSFFLCL*DLPDGS
Trigger: AGAACCATCAGGCAAGTCTCACAGACACAAGAAGAA...ACTACTGTCCTCATGCCCCTCATCCCAGAAGAGGCATCTACATATCCCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAAGCTTCCTCTGAGAACTaGTGCCCAAATGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQASSEN*CPNGAS
Trigger: TGATGCTCCATTTGGGCATCAGTTCTCAGAGGAAGC...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp ATCCCTGATAGTAAACCCAAAGCAAACCTCAAATCTAAATCCATCCCTGCAAGCAGCGGAGCCACAGAGTaGTCAGCAGTAGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: IPDSKPKANLKSKSIPASSGATE*SAVASS
Trigger: TGAAGAAGCTACTGCTGATCACTCTGTGGCTCCGCT...GCTTGCAGGGATGGATTTAGATTTGAGGTTTGCTTTGGGTTTACTATCAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp AGAACTTTGAAGCCAAAAATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAGTATCTCCCACCTTCTaGACCCCTTGGTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RTLKPKISLPINVLTSQQVSPTF*TPWSEL
Trigger: GAGCTCTGACCAAGGGGTGCAGAAGGTGGGAGATAC...TTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATTTTTGGCTTCAAAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp CTTTTACCTGCTGGTATAAATGGCTCAACACCCCCAAGGGAAGAACAGGCCACCAAGCTTCCCTATCATTaGAAGAACAGGCTTATTACC +
Preference number: 4 (lower is better)
Translates to: LLPAGINGSTPPREEQATKLPYH*KNRLIT
Trigger: GGTAATAAGCCTGTTCTTCCAATGATAGGGAAGCTT...GGTGGCCTGTTCTTCCCTTGGGGGTGTTGAGCCATTTATACCAGCAGGTAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATCCCTGATAGTAAACCCAAAGCAAACCTCAAATCTAAATCCATCCCTGCAAGCAGCATCACTACTCCTTaGGGACCCTTCTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: IPDSKPKANLKSKSIPASSITTP*GPFFWL
Trigger: GAGCCAGAAGAAGGGTCCCCAAGGAGTAGTGATGCT...GCTTGCAGGGATGGATTTAGATTTGAGGTTTGCTTTGGGTTTACTATCAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGACAAACTCTCTCTGCTTaGGATCTTTTAATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRQTLSA*DLLISA
Trigger: AGCAGAGATTAAAAGATCTCAAGCAGAGAGAGTTTG...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp ATCCCTGATAGTAAACCCAAAGCAAACCTCAAATCTAAATCCATCCCTGCAAGCATCCACTCTGCCTTCTaGAGAGAGCACTACATCCTG +
Preference number: 4 (lower is better)
Translates to: IPDSKPKANLKSKSIPASIHSAF*REHYIL
Trigger: CAGGATGTAGTGCTCTCTTCAGAAGGCAGAGTGGAT...GCTTGCAGGGATGGATTTAGATTTGAGGTTTGCTTTGGGTTTACTATCAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp CTGCCGAAAAGTGGAGTTTTCACCACTGAAGAGACAGCCTGGCCTTTCTCGTGGCAAGGCTTTTGCAATTaGCTTTTCTTTGTCAACATA +
Preference number: 4 (lower is better)
Translates to: LPKSGVFTTEETAWPFSWQGFCN*LFFVNI
Trigger: TATGTTGACAAAGAAAAGGCAATTGCAAAAGCCTTG...CCACGAGAAAGGCCAGGCTGTCTCTTCAGTGGTGAAAACTCCACTTTTCGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp AGAACTTTGAAGCCAAAAATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAACTCACTGTTCTTTCTaGCCCTGGGCTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RTLKPKISLPINVLTSQQTHCSF*PWACCC
Trigger: ACAGCAGCAAGCCCAGGGGCAGAAAGAACAGTGAGT...TTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATTTTTGGCTTCAAAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp AGAACTTTGAAGCCAAAAATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGTTCTGATGGCCACTaGAGGGCAGTGCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: RTLKPKISLPINVLTSQQSSDGH*RAVLSS
Trigger: GGATGAAAGCACTGCCCTCCAGTGGCCATCAGAACT...TTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATTTTTGGCTTCAAAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp TCCAGGGCTAGTTATCCTAAAAGTGATACTTGTAAGGGGACAATGAGCAGAAGGCTGGCAGGAGGAAGTTaGTGGTTCACCTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: SRASYPKSDTCKGTMSRRLAGGS*WFTFVF
Trigger: AAACACAAAGGTGAACCACCAACTTCCTCCTGCCAG...CCTTCTGCTCATTGTCCCCTTACAAGTATCACTTTTAGGATAACTAGCCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp AGAACTTTGAAGCCAAAAATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAGAGTATCCCCATCACTaGGGTCCGGGAGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: RTLKPKISLPINVLTSQQEYPHH*GPGGSY
Trigger: ATAACTACCTCCCGGACCCCAGTGATGGGGATACTC...TTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATTTTTGGCTTCAAAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp AGAACTTTGAAGCCAAAAATCTCTCTACCTATAAACGTGCTCACCTCCCAACAACCTGACCTGAGAAGATaGGGTGAAGCAGTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: RTLKPKISLPINVLTSQQPDLRR*GEAVGE
Trigger: TTCACCCACTGCTTCACCCCATCTTCTCAGGTCAGG...TTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATTTTTGGCTTCAAAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp TCCAGGGCTAGTTATCCTAAAAGTGATACTTGTAAGGGGACAATGAGCAGAAGGTTTGAGTGTGCACTATaGTCCCCTTCCATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SRASYPKSDTCKGTMSRRFECAL*SPSICS
Trigger: TGAACAGATGGAAGGGGATCATAGTGCACACTCAAA...CCTTCTGCTCATTGTCCCCTTACAAGTATCACTTTTAGGATAACTAGCCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR GCA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAATGTGTCTGTGAGACTTaGCTGATGGTTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQCVCET*LMVLSC
Trigger: GCAAGAAAGAACCATCAGGCAAGTCTCACAGACACA...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp TCCAGGGCTAGTTATCCTAAAAGTGATACTTGTAAGGGGACAATGAGCAGAAGGTCATCCTTTTCAACTTaGACAGTGTTGAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SRASYPKSDTCKGTMSRRSSFST*TVLRQG
Trigger: CCCTTGCCTCAACACTGTCCAAGTTGAAAAGGATGA...CCTTCTGCTCATTGTCCCCTTACAAGTATCACTTTTAGGATAACTAGCCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATCCCTGATAGTAAACCCAAAGCAAACCTCAAATCTAAATCCATCCCTGCAAGCGCAGGAGGAAGTTGGTaGTTCACCTTTGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: IPDSKPKANLKSKSIPASAGGSW*FTFVFP
Trigger: AGGAAACACAAAGGTGAACCACCAACTTCCTCCTGC...GCTTGCAGGGATGGATTTAGATTTGAGGTTTGCTTTGGGTTTACTATCAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp ATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCTCTCTAACCTGTGTTTGGAGCTaGTATAGTCTGAATCATCTG +
Preference number: 4 (lower is better)
Translates to: IAIELGRRHRTLKPKISLTCVWS*YSLNHL
Trigger: CAGATGATTCAGACTATACCAGCTCCAAACACAGGT...TAGAGAGATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp AGAACTTTGAAGCCAAAAATCTCTCTACCTATAAACGTGCTCACCTCCCAACAACTCAGTCCCATCTGTTaGTTCAATACTAGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: RTLKPKISLPINVLTSQQLSPIC*FNTRFP
Trigger: GGGGAACCTAGTATTGAATCAACAGATGGGACTGAG...TTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATTTTTGGCTTCAAAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp TCCAGGGCTAGTTATCCTAAAAGTGATACTTGTAAGGGGACAATGAGCAGAAGGATTATATGGATAGGGTaGCTAGCAAGAAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SRASYPKSDTCKGTMSRRIIWIG*LARKVA
Trigger: TGCCACCTTTCTTGCTAGCCACCCTATCCATATAAT...CCTTCTGCTCATTGTCCCCTTACAAGTATCACTTTTAGGATAACTAGCCCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR TCA 90 bp ATCCCTGATAGTAAACCCAAAGCAAACCTCAAATCTAAATCCATCCCTGCAAGCCTTGGCAAAGGAAAATaGTACTCCCAATTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: IPDSKPKANLKSKSIPASLGKGK*YSQFLQ
Trigger: CTGCAGAAATTGGGAGTATCATTTTCCTTTGCCAAG...GCTTGCAGGGATGGATTTAGATTTGAGGTTTGCTTTGGGTTTACTATCAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CCA 90 bp AGAACTTTGAAGCCAAAAATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAATACTTGACAACGATTaGAATAGGGTCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RTLKPKISLPINVLTSQQILDND*NRVCSP
Trigger: GGGAGAACAGACCCTATTCCAATCGTTGTCAAGTAT...TTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATTTTTGGCTTCAAAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp GGCTTCGCTGCCAGCTGTGGGCTGTGGTGCTGCGACTTCTCCTCTTaGTTCGACTGCGACTACAGCTGCTACTGCGGCTTCGACCCCGGG +
Preference number: 5 (lower is better)
Translates to: GFAASCGLWCCDFSS*FDCDYSCYCGFDPG
Trigger: CCCGGGGTCGAAGCCGCAGTAGCAGCTGTAGTCGCAGTCGAAGCAAGAGGAGAAGTCGCAGCACCACAGCCCACAGCTGGCAGCGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp CCCATGAGCCCTTTCTGGAGCCTGATCTCTGAGAAGGGCTCCTGGTaGTGCGGCTCCGGTCCCGGCTATAGCTTCGGCTTCGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PMSPFWSLISEKGSW*CGSGPGYSFGFAAS
Trigger: GCTGGCAGCGAAGCCGAAGCTATAGCCGGGACCGGAGCCGCAGCACCAGGAGCCCTTCTCAGAGATCAGGCTCCAGAAAGGGCTCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp GACCCCATGAGCCCTTTCTGGAGCCTGATCTCTGAGAAGGGCTCCTaGTGCTGCGGCTCCGGTCCCGGCTATAGCTTCGGCTTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: DPMSPFWSLISEKGS*CCGSGPGYSFGFAA
Trigger: GGCAGCGAAGCCGAAGCTATAGCCGGGACCGGAGCCGCAGCACCAGGAGCCCTTCTCAGAGATCAGGCTCCAGAAAGGGCTCATGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 90 bp CTGTTTCCTTCTTCAGCAGGAAGGGATCTCCGCTGGGAATCATCTTaGGCTCGGCGCCGCCTTCTCGGTGGTGCCGGGCTGCCGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LFPSSAGRDLRWESS*ARRRLLGGAGLPLP
Trigger: TGGAAGCGGCAGCCCGGCACCACCGAGAAGGCGGCGCCGAGCTCAAGATGATTCCCAGCGGAGATCCCTTCCTGCTGAAGAAGGAAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp GGGAATCATCTTGAGCTCGGCGCCGCCTTCTCGGTGGTGCCGGGCTaGCGCTTCCAGGAGGTTCTGATTTGGGTCCGCGTTCAGAATCAG +
Preference number: 5 (lower is better)
Translates to: GNHLELGAAFSVVPG*RFQEVLIWVRVQNQ
Trigger: CTGATTCTGAACGCGGACCCAAATCAGAACCTCCTGGAAGCGGCAGCCCGGCACCACCGAGAAGGCGGCGCCGAGCTCAAGATGATTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp ATGAGCCCTTTCTGGAGCCTGATCTCTGAGAAGGGCTCCTGGTGCTaGGGCTCCGGTCCCGGCTATAGCTTCGGCTTCGCTGCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: MSPFWSLISEKGSWC*GSGPGYSFGFAASC
Trigger: ACAGCTGGCAGCGAAGCCGAAGCTATAGCCGGGACCGGAGCCGCAGCACCAGGAGCCCTTCTCAGAGATCAGGCTCCAGAAAGGGCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp TCCGGTCCCGGCTATAGCTTCGGCTTCGCTGCCAGCTGTGGGCTGTaGTGCTGCGACTTCTCCTCTTGCTTCGACTGCGACTACAGCTGC +
Preference number: 5 (lower is better)
Translates to: SGPGYSFGFAASCGL*CCDFSSCFDCDYSC
Trigger: GCAGCTGTAGTCGCAGTCGAAGCAAGAGGAGAAGTCGCAGCACCACAGCCCACAGCTGGCAGCGAAGCCGAAGCTATAGCCGGGACCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp CAGAGCGCCTTTCCTCTGGGCTCTCATGACCCCATGAGCCCTTTCTaGAGCCTGATCTCTGAGAAGGGCTCCTGGTGCTGCGGCTCCGGT +
Preference number: 5 (lower is better)
Translates to: QSAFPLGSHDPMSPF*SLISEKGSWCCGSG
Trigger: ACCGGAGCCGCAGCACCAGGAGCCCTTCTCAGAGATCAGGCTCCAGAAAGGGCTCATGGGGTCATGAGAGCCCAGAGGAAAGGCGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp GCCAGCTGTGGGCTGTGGTGCTGCGACTTCTCCTCTTGCTTCGACTaGGACTACAGCTGCTACTGCGGCTTCGACCCCGGGATCTTGATC +
Preference number: 5 (lower is better)
Translates to: ASCGLWCCDFSSCFD*DYSCYCGFDPGILI
Trigger: GATCAAGATCCCGGGGTCGAAGCCGCAGTAGCAGCTGTAGTCGCAGTCGAAGCAAGAGGAGAAGTCGCAGCACCACAGCCCACAGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp GGTCCCGGCTATAGCTTCGGCTTCGCTGCCAGCTGTGGGCTGTGGTaGTGCGACTTCTCCTCTTGCTTCGACTGCGACTACAGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: GPGYSFGFAASCGLW*CDFSSCFDCDYSCY
Trigger: GTAGCAGCTGTAGTCGCAGTCGAAGCAAGAGGAGAAGTCGCAGCACCACAGCCCACAGCTGGCAGCGAAGCCGAAGCTATAGCCGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp GAATGTGGATGGGCTGCAGGGCTGGTGTGGCTGGAGCTAGGGCGGTaGAGGCTGGAAAGGCCTTCACTTGTTTGGCCAGAAGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: ECGWAAGLVWLELGR*RLERPSLVWPEAAA
Trigger: AGCAGCAGCTTCTGGCCAAACAAGTGAAGGCCTTTCCAGCCTCCACCGCCCTAGCTCCAGCCACACCAGCCCTGCAGCCCATCCACATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 90 bp TCGACTGCGACTACAGCTGCTACTGCGGCTTCGACCCCGGGATCTTaGTCGCTCCCTTGTATGACTCCGAGATCGGCTTCGGGACTGGCT +
Preference number: 5 (lower is better)
Translates to: STATTAATAASTPGS*SLPCMTPRSASGLA
Trigger: AGCCAGTCCCGAAGCCGATCTCGGAGTCATACAAGGGAGCGATCAAGATCCCGGGGTCGAAGCCGCAGTAGCAGCTGTAGTCGCAGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp AGGGCGGTGGAGGCTGGAAAGGCCTTCACTTGTTTGGCCAGAAGCTaGTGCTGGATGTGCTGCTGTGCAGCCTGCTGGAGCTTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: RAVEAGKAFTCLARS*CWMCCCAACWSLLY
Trigger: GTACAGCAAGCTCCAGCAGGCTGCACAGCAGCACATCCAGCAGCAGCTTCTGGCCAAACAAGTGAAGGCCTTTCCAGCCTCCACCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp GCGGTGGAGGCTGGAAAGGCCTTCACTTGTTTGGCCAGAAGCTGCTaGTGGATGTGCTGCTGTGCAGCCTGCTGGAGCTTGCTGTACTTC +
Preference number: 5 (lower is better)
Translates to: AVEAGKAFTCLARSC*WMCCCAACWSLLYF
Trigger: GAAGTACAGCAAGCTCCAGCAGGCTGCACAGCAGCACATCCAGCAGCAGCTTCTGGCCAAACAAGTGAAGGCCTTTCCAGCCTCCACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GGCCTTTCTCGTGGCACTGAGAAGGCAGGACCAGATGGGCCCATGGCAAGTGCTTTCGACCCCGGGATCTaGATCGCTCCCTTGTATGAC +
Preference number: 5 (lower is better)
Translates to: GLSRGTEKAGPDGPMASAFDPGI*IAPLYD
Trigger: GTCATACAAGGGAGCGATCAAGATCCCGGGGTCGAA...AGCACTTGCCATGGGCCCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 90 bp AGAGGCATCAGAGCTGCTAGAATAAGAGCGCCGGGAGGAACGATGTaGGGAATGGCGATGGCCAGACCGAGAGCGGCTACGAGAATGCTC +
Preference number: 5 (lower is better)
Translates to: RGIRAARIRAPGGTM*GMAMARPRAATRML
Trigger: GAGCATTCTCGTAGCCGCTCTCGGTCTGGCCATCGCCATTCCTCACATCGTTCCTCCCGGCGCTCTTATTCTAGCAGCTCTGATGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 90 bp AGGTCTGGGGCTATAGGCAGCAAGCTGGATTCCACAGGGCCTGGTTaGCTGCCACTATCCAGAGACTCCAGAGTATCCCCATCACTGGGG +
Preference number: 5 (lower is better)
Translates to: RSGAIGSKLDSTGPG*LPLSRDSRVSPSLG
Trigger: CCCCAGTGATGGGGATACTCTGGAGTCTCTGGATAGTGGCAGTCAACCAGGCCCTGTGGAATCCAGCTTGCTGCCTATAGCCCCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp TGCTGCGACTTCTCCTCTTGCTTCGACTGCGACTACAGCTGCTACTaGGGCTTCGACCCCGGGATCTTGATCGCTCCCTTGTATGACTCC +
Preference number: 5 (lower is better)
Translates to: CCDFSSCFDCDYSCY*GFDPGILIAPLYDS
Trigger: GGAGTCATACAAGGGAGCGATCAAGATCCCGGGGTCGAAGCCGCAGTAGCAGCTGTAGTCGCAGTCGAAGCAAGAGGAGAAGTCGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp CTGTGGTGCTGCGACTTCTCCTCTTGCTTCGACTGCGACTACAGCTaGTACTGCGGCTTCGACCCCGGGATCTTGATCGCTCCCTTGTAT +
Preference number: 5 (lower is better)
Translates to: LWCCDFSSCFDCDYS*YCGFDPGILIAPLY
Trigger: ATACAAGGGAGCGATCAAGATCCCGGGGTCGAAGCCGCAGTAGCAGCTGTAGTCGCAGTCGAAGCAAGAGGAGAAGTCGCAGCACCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp GGCCTTCACTTGTTTGGCCAGAAGCTGCTGCTGGATGTGCTGCTGTaGAGCCTGCTGGAGCTTGCTGTACTTCTCCATCTCCTCAGGGGT +
Preference number: 5 (lower is better)
Translates to: GLHLFGQKLLLDVLL*SLLELAVLLHLLRG
Trigger: ACCCCTGAGGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTGCACAGCAGCACATCCAGCAGCAGCTTCTGGCCAAACAAGTGAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp GCCTTCTCGGTGGTGCCGGGCTGCCGCTTCCAGGAGGTTCTGATTTaGGTCCGCGTTCAGAATCAGCTGCGGCTGATGATTTGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: AFSVVPGCRFQEVLI*VRVQNQLRLMICSS
Trigger: AGAAGAACAAATCATCAGCCGCAGCTGATTCTGAACGCGGACCCAAATCAGAACCTCCTGGAAGCGGCAGCCCGGCACCACCGAGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp GTGGAGGCTGGAAAGGCCTTCACTTGTTTGGCCAGAAGCTGCTGCTaGATGTGCTGCTGTGCAGCCTGCTGGAGCTTGCTGTACTTCTCC +
Preference number: 5 (lower is better)
Translates to: VEAGKAFTCLARSCC*MCCCAACWSLLYFS
Trigger: GGAGAAGTACAGCAAGCTCCAGCAGGCTGCACAGCAGCACATCCAGCAGCAGCTTCTGGCCAAACAAGTGAAGGCCTTTCCAGCCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GGCCTTTCTCGTGGCACTGAGAAGGCAGGACCAGATGGGCCCATGGCAAGTGCTTCAACTTGGACAGTGTaGAGGCAAGGGACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: GLSRGTEKAGPDGPMASASTWTV*RQGTLH
Trigger: ATGGAGGGTCCCTTGCCTCAACACTGTCCAAGTTGA...AGCACTTGCCATGGGCCCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp ATCCTCCTGACAGCAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGTGCCCTGATGGTTCTTTCTaGCTAGGATGGCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: ILLTAAAACCSSTRESQCPDGSF*LGWLLP
Trigger: TGGGAGAAGCCATCCTAGCAAGAAAGAACCATCAGG...GCACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp CAGTTTCTGACATATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCTaGTACAGGCAGCCCCTGATGCAGGTTCATCCACTCTGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: QFLTYGYPQAPACSG*YRQPLMQVHPLCLL
Trigger: CAGAAGGCAGAGTGGATGAACCTGCATCAGGGGCTGCCTGTAGCAGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATATGTCAGAAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp CTCCCAGTGTCTTCAGTTTCTGACATATGGCTACCCCCAGGCTCCTaGTTGTTCAGGCTGCTACAGGCAGCCCCTGATGCAGGTTCATCC +
Preference number: 5 (lower is better)
Translates to: LPVSSVSDIWLPPGS*LFRLLQAAPDAGSS
Trigger: GGATGAACCTGCATCAGGGGCTGCCTGTAGCAGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATATGTCAGAAACTGAAGACACTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp ACTTGTTTGGCCAGAAGCTGCTGCTGGATGTGCTGCTGTGCAGCCTaGTGGAGCTTGCTGTACTTCTCCATCTCCTCAGGGGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: TCLARSCCWMCCCAA*WSLLYFSISSGVKV
Trigger: CACCTTCACCCCTGAGGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTGCACAGCAGCACATCCAGCAGCAGCTTCTGGCCAAACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp CTCCGATGGCTGGACCGGCTGCTATGTTTGGTGTTAGCTCTCCGCTaGCAGGAGGAAGTTGGTGGTTCACCTTTGTGTTTCCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: LRWLDRLLCLVLALR*QEEVGGSPLCFLPL
Trigger: CAGTGGGAGGAAACACAAAGGTGAACCACCAACTTCCTCCTGCCAGCGGAGAGCTAACACCAAACATAGCAGCCGGTCCAGCCATCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp AGCTTGCTGTACTTCTCCATCTCCTCAGGGGTGAAGGTGATGGGCTaGCTCTCGAGAGGAGCCAAGGAGGCATCCTCAGTCCCATCTGTT +
Preference number: 5 (lower is better)
Translates to: SLLYFSISSGVKVMG*LSRGAKEASSVPSV
Trigger: AACAGATGGGACTGAGGATGCCTCCTTGGCTCCTCTCGAGAGCCAGCCCATCACCTTCACCCCTGAGGAGATGGAGAAGTACAGCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp TGTTTGGCCAGAAGCTGCTGCTGGATGTGCTGCTGTGCAGCCTGCTaGAGCTTGCTGTACTTCTCCATCTCCTCAGGGGTGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: CLARSCCWMCCCAAC*SLLYFSISSGVKVM
Trigger: CATCACCTTCACCCCTGAGGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTGCACAGCAGCACATCCAGCAGCAGCTTCTGGCCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GAAGTTAAGGAAAACTACCTCCAGGATGGCAGAGGCGGCCAGAGCATGGCTAGAAAGTCTCGGTCCTCGTaGAAGCGGGAGAAGCGGTCC +
Preference number: 5 (lower is better)
Translates to: EVKENYLQDGRGGQSMARKSRSS*KREKRS
Trigger: GGACCGCTTCTCCCGCTTCAACGAGGACCGAGACTT...TCTAGCCATGCTCTGGCCGCCTCTGCCATCCTGGAGGTAGTTTTCCTTAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp ACTCATCTTTATCCTCTTCTCCACCATCCTCGTCTACAGCCACCGTaGTTGGTCGGAACATGGGCCCGCTTCCCGGTGCACATTCAGCTT +
Preference number: 5 (lower is better)
Translates to: THLYPLLHHPRLQPP*LVGTWARFPVHIQL
Trigger: AAGCTGAATGTGCACCGGGAAGCGGGCCCATGTTCCGACCAACCACGGTGGCTGTAGACGAGGATGGTGGAGAAGAGGATAAAGATGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp GAAGCATCATCACTATCCTCATCACCACTACTGGGTTGGCTCCGATaGCTGGACCGGCTGCTATGTTTGGTGTTAGCTCTCCGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: EASSLSSSPLLGWLR*LDRLLCLVLALRWQ
Trigger: CTGCCAGCGGAGAGCTAACACCAAACATAGCAGCCGGTCCAGCCATCGGAGCCAACCCAGTAGTGGTGATGAGGATAGTGATGATGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGACCCCCAGGCTCCTGCTaGTTCAGGCTGCTACAGGCA +
Preference number: 5 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRPPGSC*FRLLQA
Trigger: TGCCTGTAGCAGCCTGAACAAGCAGGAGCCTGGGGG...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GCTGTTGAACCAATCCTCCCCTCCTCCATGGAGTCCACGGTTTCTCTGTATAACCCTCCCACTGTGATCTaGGCAACTGCTACCACCCCC +
Preference number: 5 (lower is better)
Translates to: AVEPILPSSMESTVSLYNPPTVI*ATATTP
Trigger: GGGGGTGGTAGCAGTTGCCAAGATCACAGTGGGAGG...GTTATACAGAGAAACCGTGGACTCCATGGAGGAGGGGAGGATTGGTTCAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp CTGCCGAAAAGTGGAGTTTTCACCACTGAAGAGACAGCCTGGCCTTTCTCGTGGGCAGCCTGCTGGAGCTaGCTGTACTTCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: LPKSGVFTTEETAWPFSWAACWS*LYFSIS
Trigger: GGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTGC...CCACGAGAAAGGCCAGGCTGTCTCTTCAGTGGTGAAAACTCCACTTTTCGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 90 bp TCTGGGGGAGGGTCTGATAAGGGACCAGCTGCTTCCTCTGAGAACTaGTGCCCAAATGGAGCATCACTACTCCTTGGGGACCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SGGGSDKGPAASSEN*CPNGASLLLGDPSS
Trigger: AGAAGAAGGGTCCCCAAGGAGTAGTGATGCTCCATTTGGGCATCAGTTCTCAGAGGAAGCAGCTGGTCCCTTATCAGACCCTCCCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp TGTTCAGGCTGCTACAGGCAGCCCCTGATGCAGGTTCATCCACTCTaGCTTCTGAAGAGAGCACTACATCCTGCTCCTCTTCCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: CSGCYRQPLMQVHPL*LLKRALHPAPLPGF
Trigger: AAAGCCAGGAAGAGGAGCAGGATGTAGTGCTCTCTTCAGAAGGCAGAGTGGATGAACCTGCATCAGGGGCTGCCTGTAGCAGCCTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp CTTCAGGACTGCAGTCACTTTCTGACCCCCTTCCTGTGCCAGTATTaGTATTCTGGGAGGGCAGGCCTGCTCCTTTACTGTCATCTCCTC +
Preference number: 5 (lower is better)
Translates to: LQDCSHFLTPFLCQY*YSGRAGLLLYCHLL
Trigger: GAGGAGATGACAGTAAAGGAGCAGGCCTGCCCTCCCAGAATAGCAATACTGGCACAGGAAGGGGGTCAGAAAGTGACTGCAGTCCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp ATCTTTATCCTCTTCTCCACCATCCTCGTCTACAGCCACCGTGGTTaGTCGGAACATGGGCCCGCTTCCCGGTGCACATTCAGCTTGTTT +
Preference number: 5 (lower is better)
Translates to: IFILFSTILVYSHRG*SEHGPASRCTFSLF
Trigger: AAACAAGCTGAATGTGCACCGGGAAGCGGGCCCATGTTCCGACCAACCACGGTGGCTGTAGACGAGGATGGTGGAGAAGAGGATAAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp CGGTGTGAGGAAGCATCATCACTATCCTCATCACCACTACTGGGTTaGCTCCGATGGCTGGACCGGCTGCTATGTTTGGTGTTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: RCEEASSLSSSPLLG*LRWLDRLLCLVLAL
Trigger: GAGAGCTAACACCAAACATAGCAGCCGGTCCAGCCATCGGAGCCAACCCAGTAGTGGTGATGAGGATAGTGATGATGCTTCCTCACACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp TCCTCCTCTTCTTCCTCCTCCTCCTCTTCCTCCTCCTCACTGTACTaGGATGGAGACTTCTGGTGCAGTCGGTGTGAGGAAGCATCATCA +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSSSSSSLY*DGDFWCSRCEEASS
Trigger: TGATGATGCTTCCTCACACCGACTGCACCAGAAGTCTCCATCCCAGTACAGTGAGGAGGAGGAAGAGGAGGAGGAGGAAGAAGAGGAGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp ATCCTCCTGACAGCAGCAGCCGCCTGCTGCTCATCAACCCGAGAGTCCCAGTGCTTGCACCACTGTTGGTaGATGACTCATCTTTATCCT +
Preference number: 5 (lower is better)
Translates to: ILLTAAAACCSSTRESQCLHHCW*MTHLYP
Trigger: AGGATAAAGATGAGTCATCAACCAACAGTGGTGCAA...GCACTGGGACTCTCGGGTTGATGAGCAGCAGGCGGCTGCTGCTGTCAGGAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GGCCTTTCTCGTGGCACTGAGAAGGCAGGACCAGATGGGCCCATGGCAAGTGCTTCCTCTGCATGGTCCTaGAAAACGGATGCTATTGAT +
Preference number: 5 (lower is better)
Translates to: GLSRGTEKAGPDGPMASASSAWS*KTDAID
Trigger: ATCAATAGCATCCGTTTTCAAGGACCATGCAGAGGA...AGCACTTGCCATGGGCCCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GAAGTTAAGGAAAACTACCTCCAGGATGGCAGAGGCGGCCAGAGCATGGCTAGACACCTTCTGCACCCCTaGGTCAGAGCTCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: EVKENYLQDGRGGQSMARHLLHP*VRALLI
Trigger: GATGAGAAGAGCTCTGACCAAGGGGTGCAGAAGGTG...TCTAGCCATGCTCTGGCCGCCTCTGCCATCCTGGAGGTAGTTTTCCTTAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp AAACCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAATCACCACTACTGGGTaGGCTCCGATGGCTGGACCG +
Preference number: 5 (lower is better)
Translates to: KPKDPFSQTITECHCFQRITTTG*APMAGP
Trigger: CGGTCCAGCCATCGGAGCCAACCCAGTAGTGGTGAT...TCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 90 bp GGCCTGAGAAATGTCTTTAGGATTGGACTCACACATCGGGCTCTCTaGCGTCTCCCTACTCTCTACACTCTGCTCATCTTCCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GLRNVFRIGLTHRAL*RLPTLYTLLIFPSS
Trigger: GGAGGAGGGGAAGATGAGCAGAGTGTAGAGAGTAGGGAGACGTCAGAGAGCCCGATGTGTGAGTCCAATCCTAAAGACATTTCTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 90 bp CTCCTCCTCACTGTACTGGGATGGAGACTTCTGGTGCAGTCGGTGTaGGGAAGCATCATCACTATCCTCATCACCACTACTGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: LLLTVLGWRLLVQSV*GSIITILITTTGLA
Trigger: AGCCAACCCAGTAGTGGTGATGAGGATAGTGATGATGCTTCCTCACACCGACTGCACCAGAAGTCTCCATCCCAGTACAGTGAGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 90 bp CTGGCTCTCGAGAGGAGCCAAGGAGGCATCCTCAGTCCCATCTGTTaGTTCAATACTAGGTTCCCCACTGGGAGGTGCATAATTGGGGAA +
Preference number: 5 (lower is better)
Translates to: LALERSQGGILSPIC*FNTRFPTGRCIIGE
Trigger: TTCCCCAATTATGCACCTCCCAGTGGGGAACCTAGTATTGAATCAACAGATGGGACTGAGGATGCCTCCTTGGCTCCTCTCGAGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp CTGGGCTTGCTGCTGTCTTACTACAGCCTTGCGGCTTGGGAGAGCTaGTTTTTCTGTTCTCGGGGGCACTCTTTGAGTGTGCACTATGAT +
Preference number: 5 (lower is better)
Translates to: LGLLLSYYSLAAWES*FFCSRGHSLSVHYD
Trigger: ATCATAGTGCACACTCAAAGAGTGCCCCCGAGAACAGAAAAAGCAGCTCTCCCAAGCCGCAAGGCTGTAGTAAGACAGCAGCAAGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp TGCTATTCTGGGAGGGCAGGCCTGCTCCTTTACTGTCATCTCCTCTaGCATCTTCTTTCTTTCCAGGACCTTCTCCCCGACCTGATTGGA +
Preference number: 5 (lower is better)
Translates to: CYSGRAGLLLYCHLL*HLLSFQDLLPDLIG
Trigger: TCCAATCAGGTCGGGGAGAAGGTCCTGGAAAGAAAGAAGATGGCAGAGGAGATGACAGTAAAGGAGCAGGCCTGCCCTCCCAGAATAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp GAATGGACCAGTAGGATGCTTGGGTCCCTGGCCTGCTTTTGTTGCTaGGGTGGCCTGAGAAATGTCTTTAGGATTGGACTCACACATCGG +
Preference number: 5 (lower is better)
Translates to: EWTSRMLGSLACFCC*GGLRNVFRIGLTHR
Trigger: CCGATGTGTGAGTCCAATCCTAAAGACATTTCTCAGGCCACCCCAGCAACAAAAGCAGGCCAGGGACCCAAGCATCCTACTGGTCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp CCGGCTGCTATGTTTGGTGTTAGCTCTCCGCTGGCAGGAGGAAGTTaGTGGTTCACCTTTGTGTTTCCTCCCACTGTGATCTTGGCAACT +
Preference number: 5 (lower is better)
Translates to: PAAMFGVSSPLAGGS*WFTFVFPPTVILAT
Trigger: AGTTGCCAAGATCACAGTGGGAGGAAACACAAAGGTGAACCACCAACTTCCTCCTGCCAGCGGAGAGCTAACACCAAACATAGCAGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp TCCTCCTCCTCTTCCTCCTCCTCACTGTACTGGGATGGAGACTTCTaGTGCAGTCGGTGTGAGGAAGCATCATCACTATCCTCATCACCA +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSLYWDGDF*CSRCEEASSLSSSP
Trigger: TGGTGATGAGGATAGTGATGATGCTTCCTCACACCGACTGCACCAGAAGTCTCCATCCCAGTACAGTGAGGAGGAGGAAGAGGAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GGCCTTTCTCGTGGCACTGAGAAGGCAGGACCAGATGGGCCCATGGCAAGTGCTTTGACGGGAGCTTTCTaGGCAAAGGAAAATGATACT +
Preference number: 5 (lower is better)
Translates to: GLSRGTEKAGPDGPMASALTGAF*AKENDT
Trigger: AGTATCATTTTCCTTTGCCAAGAAAGCTCCCGTCAA...AGCACTTGCCATGGGCCCATCTGGTCCTGCCTTCTCAGTGCCACGAGAAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp CTGCCGAAAAGTGGAGTTTTCACCACTGAAGAGACAGCCTGGCCTTTCTCGTGGATCTTGATCGCTCCCTaGTATGACTCCGAGATCGGC +
Preference number: 5 (lower is better)
Translates to: LPKSGVFTTEETAWPFSWILIAP*YDSEIG
Trigger: GCCGATCTCGGAGTCATACAAGGGAGCGATCAAGAT...CCACGAGAAAGGCCAGGCTGTCTCTTCAGTGGTGAAAACTCCACTTTTCGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp GCTGCTATGTTTGGTGTTAGCTCTCCGCTGGCAGGAGGAAGTTGGTaGTTCACCTTTGTGTTTCCTCCCACTGTGATCTTGGCAACTGCT +
Preference number: 5 (lower is better)
Translates to: AAMFGVSSPLAGGSW*FTFVFPPTVILATA
Trigger: AGCAGTTGCCAAGATCACAGTGGGAGGAAACACAAAGGTGAACCACCAACTTCCTCCTGCCAGCGGAGAGCTAACACCAAACATAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 90 bp GCTATCATCAGAGTAACTGTGCTGTCTACTATAGCAGCTCTGGTCTaGAGAGGCATCAGAGCTGCTAGAATAAGAGCGCCGGGAGGAACG +
Preference number: 5 (lower is better)
Translates to: AIIRVTVLSTIAALV*RGIRAARIRAPGGT
Trigger: CGTTCCTCCCGGCGCTCTTATTCTAGCAGCTCTGATGCCTCTTCAGACCAGAGCTGCTATAGTAGACAGCACAGTTACTCTGATGATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 90 bp TCTGGCAGTAACAGAATTCTTATCTTCAGGACTGCAGTCACTTTCTaGCCCCCTTCCTGTGCCAGTATTGCTATTCTGGGAGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SGSNRILIFRTAVTF*PPSCASIAILGGQA
Trigger: GGCCTGCCCTCCCAGAATAGCAATACTGGCACAGGAAGGGGGTCAGAAAGTGACTGCAGTCCTGAAGATAAGAATTCTGTTACTGCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp GACTCACACATCGGGCTCTCTGACGTCTCCCTACTCTCTACACTCTaGTCATCTTCCCCTCCTCCGGAGCCTTTCTTTGTTTCAGTTTTA +
Preference number: 5 (lower is better)
Translates to: DSHIGLSDVSLLSTL*SSSPPPEPFFVSVL
Trigger: TAAAACTGAAACAAAGAAAGGCTCCGGAGGAGGGGAAGATGAGCAGAGTGTAGAGAGTAGGGAGACGTCAGAGAGCCCGATGTGTGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp TCAAGATTACCAGTGCCATCAGTATCTCCCACCTTCTGCACCCCTTaGTCAGAGCTCTTCTCATCAGCCTTCGTTCCATCTTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: SRLPVPSVSPTFCTP*SELFSSAFVPSSEL
Trigger: GAGCTCAGAAGATGGAACGAAGGCTGATGAGAAGAGCTCTGACCAAGGGGTGCAGAAGGTGGGAGATACTGATGGCACTGGTAATCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp CTTTTACCTGCTGGTATAAATGGCTCAACACCCCCAAGGGAAGAACAGGCCACCCGTCTTTGCGGGATCTaGAAGAGACATTTCGGGCAA +
Preference number: 5 (lower is better)
Translates to: LLPAGINGSTPPREEQATRLCGI*KRHFGQ
Trigger: TTGCCCGAAATGTCTCTTCAAGATCCCGCAAAGACG...GGTGGCCTGTTCTTCCCTTGGGGGTGTTGAGCCATTTATACCAGCAGGTAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp CTGCCGAAAAGTGGAGTTTTCACCACTGAAGAGACAGCCTGGCCTTTCTCGTGGGAAATGTCTTTAGGATaGGACTCACACATCGGGCTC +
Preference number: 5 (lower is better)
Translates to: LPKSGVFTTEETAWPFSWEMSLG*DSHIGL
Trigger: GAGCCCGATGTGTGAGTCCAATCCTAAAGACATTTC...CCACGAGAAAGGCCAGGCTGTCTCTTCAGTGGTGAAAACTCCACTTTTCGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp AAACCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGACCAGGAGGTTCTGATTaGGGTCCGCGTTCAGAATCA +
Preference number: 5 (lower is better)
Translates to: KPKDPFSQTITECHCFQRPGGSD*GPRSES
Trigger: TGATTCTGAACGCGGACCCAAATCAGAACCTCCTGG...TCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp CTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGACACTGCCGAAAAGTGCTTCCTGTGCCAGTATaGCTATTCTGGGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LTWDNVSQTDSQRHCRKVLPVPV*LFWEGR
Trigger: CCTGCCCTCCCAGAATAGCAATACTGGCACAGGAAG...CACTTTTCGGCAGTGTCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GCTGAAATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCAAGGCCTTCACTTGTTaGGCCAGAAGCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: AEIAIELGRRHRTLKPKIKAFTC*ARSCCW
Trigger: CCAGCAGCAGCTTCTGGCCAAACAAGTGAAGGCCTT...GATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTATTTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp AAAGAATGGACCAGTAGGATGCTTGGGTCCCTGGCCTGCTTTTGTTaGTGGGGTGGCCTGAGAAATGTCTTTAGGATTGGACTCACACAT +
Preference number: 5 (lower is better)
Translates to: KEWTSRMLGSLACFC*WGGLRNVFRIGLTH
Trigger: ATGTGTGAGTCCAATCCTAAAGACATTTCTCAGGCCACCCCAGCAACAAAAGCAGGCCAGGGACCCAAGCATCCTACTGGTCCATTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp TTGGTGGTTCACCTTTGTGTTTCCTCCCACTGTGATCTTGGCAACTaGTACCACCCCCACCATCATCCTTCTTGCCACTGTTTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: LVVHLCVSSHCDLGN*YHPHHHPSCHCFLL
Trigger: AAGAAGGAAACAGTGGCAAGAAGGATGATGGTGGGGGTGGTAGCAGTTGCCAAGATCACAGTGGGAGGAAACACAAAGGTGAACCACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp AATTCTTATCTTCAGGACTGCAGTCACTTTCTGACCCCCTTCCTGTaGCAGTATTGCTATTCTGGGAGGGCAGGCCTGCTCCTTTACTGT +
Preference number: 5 (lower is better)
Translates to: NSYLQDCSHFLTPFL*QYCYSGRAGLLLYC
Trigger: ACAGTAAAGGAGCAGGCCTGCCCTCCCAGAATAGCAATACTGGCACAGGAAGGGGGTCAGAAAGTGACTGCAGTCCTGAAGATAAGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp CCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAATAAAGGGGAAATTAGGTTaGACCTTGCAGTGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PKDPFSQTITECHCFQRIKGKLG*TLQCAG
Trigger: CCCAGCACACTGCAAGGTCAAACCTAATTTCCCCTT...TATTCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GCTGAAATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCGCTGGCAGGAGGAAGTaGGTGGTTCACCTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: AEIAIELGRRHRTLKPKIAGRRK*VVHLCV
Trigger: AACACAAAGGTGAACCACCAACTTCCTCCTGCCAGC...GATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTATTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 90 bp CCCTGTTCCTTCTTCCCGTTTCATCCTTTTCAACTTGGACAGTGTTaGGGCAAGGGACCCTCCATCCTGAGGGTCTTCATCTTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: PCSFFPFHPFQLGQC*GKGPSILRVFIFFL
Trigger: AAGAAAGAAGATGAAGACCCTCAGGATGGAGGGTCCCTTGCCTCAACACTGTCCAAGTTGAAAAGGATGAAACGGGAAGAAGGAACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp TTCTTTCCATCAAGATTACCAGTGCCATCAGTATCTCCCACCTTCTaGACCCCTTGGTCAGAGCTCTTCTCATCAGCCTTCGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: FFPSRLPVPSVSPTF*TPWSELFSSAFVPS
Trigger: AGATGGAACGAAGGCTGATGAGAAGAGCTCTGACCAAGGGGTGCAGAAGGTGGGAGATACTGATGGCACTGGTAATCTTGATGGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp CATCCTGAGGGTCTTCATCTTCTTTCTTTCCATCAAGATTACCAGTaGCATCAGTATCTCCCACCTTCTGCACCCCTTGGTCAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: HPEGLHLLSFHQDYQ*HQYLPPSAPLGQSS
Trigger: AGAGCTCTGACCAAGGGGTGCAGAAGGTGGGAGATACTGATGGCACTGGTAATCTTGATGGAAAGAAAGAAGATGAAGACCCTCAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGATCCGATTCTATGGGCTaGTCAAGGGATGCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRSDSMG*SRDACS
Trigger: TGAACAAGCATCCCTTGACAAGCCCATAGAATCGGA...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp CTGCCGAAAAGTGGAGTTTTCACCACTGAAGAGACAGCCTGGCCTTTCTCGTGGGCAAACTCTCTCTGCTaGAGATCTTTTAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: LPKSGVFTTEETAWPFSWANSLC*RSFNLC
Trigger: GCAGAGATTAAAAGATCTCAAGCAGAGAGAGTTTGC...CCACGAGAAAGGCCAGGCTGTCTCTTCAGTGGTGAAAACTCCACTTTTCGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp CTTTGGCTGTCAAGACACTGCCCGTTCCAGCTTTTACCTGCTGGTATAAATGGCCGGTGCACATTCAGCTaGTTTTCTTTGCTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: LWLSRHCPFQLLPAGINGRCTFS*FSLLCQ
Trigger: TTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCG...GCCATTTATACCAGCAGGTAAAAGCTGGAACGGGCAGTGTCTTGACAGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GCTGTTGAACCAATCCTCCCCTCCTCCATGGAGTCCACGGTTTCTCTGTATAACGCTATTGATTCAAGTTaGACGGGAGCTTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: AVEPILPSSMESTVSLYNAIDSS*TGAFLA
Trigger: TGCCAAGAAAGCTCCCGTCAAACTTGAATCAATAGC...GTTATACAGAGAAACCGTGGACTCCATGGAGGAGGGGAGGATTGGTTCAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp ATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCTCTCTACACAGCGGCTTCCTTTaGCAGCTCAGAAGCTTCACT +
Preference number: 5 (lower is better)
Translates to: IAIELGRRHRTLKPKISLHSGFL*QLRSFT
Trigger: AGTGAAGCTTCTGAGCTGCAAAAGGAAGCCGCTGTG...TAGAGAGATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 90 bp GCATCACTACTCCTTGGGGACCCTTCTTCTGGCTCTGAATGTTCCTaGTCTTCTCCCCTTTCTAAGCCAGACTCTTCACATTTCTTATTG +
Preference number: 5 (lower is better)
Translates to: ASLLLGDPSSGSECS*SSPLSKPDSSHFLL
Trigger: CAATAAGAAATGTGAAGAGTCTGGCTTAGAAAGGGGAGAAGAGCAGGAACATTCAGAGCCAGAAGAAGGGTCCCCAAGGAGTAGTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp CTTTGGCTGTCAAGACACTGCCCGTTCCAGCTTTTACCTGCTGGTATAAATGGCCCCATGACATCATACTaGACAACGATTGGAATAGGG +
Preference number: 5 (lower is better)
Translates to: LWLSRHCPFQLLPAGINGPMTSY*TTIGIG
Trigger: CCCTATTCCAATCGTTGTCAAGTATGATGTCATGGG...GCCATTTATACCAGCAGGTAAAAGCTGGAACGGGCAGTGTCTTGACAGCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp CCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGAATATGTTTCTTCTCGTCTTaGCGGGATCTTGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: PKDPFSQTITECHCFQRICFFSS*RDLEET
Trigger: TGTCTCTTCAAGATCCCGCAAAGACGAGAAGAAACA...TATTCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GCTGAAATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCCTCCGGAGCCTTTCTTaGTTTCAGTTTTACCTCCAG +
Preference number: 5 (lower is better)
Translates to: AEIAIELGRRHRTLKPKILRSLS*FQFYLQ
Trigger: CTGGAGGTAAAACTGAAACAAAGAAAGGCTCCGGAG...GATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTATTTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGATCTTCACATTTCTTATaGGACTTCCGGGTAGCTGGA +
Preference number: 5 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRSSHFL*DFRVAG
Trigger: TCCAGCTACCCGGAAGTCCAATAAGAAATGTGAAGA...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 90 bp ATCCTTTTCAACTTGGACAGTGTTGAGGCAAGGGACCCTCCATCCTaGGGGTCTTCATCTTCTTTCTTTCCATCAAGATTACCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: ILFNLDSVEARDPPS*GSSSSFFPSRLPVP
Trigger: TGGCACTGGTAATCTTGATGGAAAGAAAGAAGATGAAGACCCTCAGGATGGAGGGTCCCTTGCCTCAACACTGTCCAAGTTGAAAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GCTGAAATAGCAATCGAGCTGGGCAGACGGCACAGAACTTTGAAGCCAAAAATCTTCATCCTTTTCAACTaGGACAGTGTTGAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: AEIAIELGRRHRTLKPKIFILFN*DSVEAR
Trigger: CCTTGCCTCAACACTGTCCAAGTTGAAAAGGATGAA...GATTTTTGGCTTCAAAGTTCTGTGCCGTCTGCCCAGCTCGATTGCTATTTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp AAACCAAAGGACCCCTTTTCCCAGACAATCACCGAGTGTCACTGCTTCCAGAGATTCCGTTTTCGTTTCTaGCGCTTCTTAGATTTCTCC +
Preference number: 5 (lower is better)
Translates to: KPKDPFSQTITECHCFQRFRFRF*RFLDFS
Trigger: GGAGAAATCTAAGAAGCGCAAGAAACGAAAACGGAA...TCTCTGGAAGCAGTGACACTCGGTGATTGTCTGGGAAAAGGGGTCCTTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp AGAACTTTGAAGCCAAAAATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAGAGCATCACTACTCCTaGGGGACCCTTCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: RTLKPKISLPINVLTSQQEHHYS*GTLLLA
Trigger: AGCCAGAAGAAGGGTCCCCAAGGAGTAGTGATGCTC...TTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATTTTTGGCTTCAAAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 90 bp ATGGAAGGCTCTGCTTTGGTGAAAATGAGTAGTTCTGATGGCCACTaGAGGGCAGTGCTTTCATCCTTGCTTAAAACTGGAAAGAATGGA +
Preference number: 5 (lower is better)
Translates to: MEGSALVKMSSSDGH*RAVLSSLLKTGKNG
Trigger: TCCATTCTTTCCAGTTTTAAGCAAGGATGAAAGCACTGCCCTCCAGTGGCCATCAGAACTACTCATTTTCACCAAAGCAGAGCCTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp GACTCCCTCTTCCACCTCACCTGGGATAACGTGTCACAAACGGATAGTCAAAGACCAAGGCTTTTGCAATaGCCTTTTCTTTGTCAACAT +
Preference number: 5 (lower is better)
Translates to: DSLFHLTWDNVSQTDSQRPRLLQ*PFLCQH
Trigger: ATGTTGACAAAGAAAAGGCAATTGCAAAAGCCTTGG...TCTTTGACTATCCGTTTGTGACACGTTATCCCAGGTGAGGTGGAAGAGGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp AATCTCTCTACCTATAAACGTGCTCACCTCCCAACAAAGAGAGAACTGTCCCAACCACCATCATCCTTCTaGCCACTGTTTCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: NLSTYKRAHLPTKRELSQPPSSF*PLFPSS
Trigger: TGAAGAAGGAAACAGTGGCAAGAAGGATGATGGTGG...TTGGGACAGTTCTCTCTTTGTTGGGAGGTGAGCACGTTTATAGGTAGAGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp TTTTCTGGGATATGTAGATGCCTCTTCTGGGATGAGGGGCATGAGGACAGTAGTGAAGCTTCCCTATCATaGGAAGAACAGGCTTATTAC +
Preference number: 5 (lower is better)
Translates to: FSGICRCLFWDEGHEDSSEASLS*EEQAYY
Trigger: GTAATAAGCCTGTTCTTCCAATGATAGGGAAGCTTC...ACTACTGTCCTCATGCCCCTCATCCCAGAAGAGGCATCTACATATCCCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp TCCAGGGCTAGTTATCCTAAAAGTGATACTTGTAAGGGGACAATGAGCAGAAGGGCACTTGCACCACTGTaGGTTGATGACTCATCTTTA +
Preference number: 5 (lower is better)
Translates to: SRASYPKSDTCKGTMSRRALAPL*VDDSSL
Trigger: TAAAGATGAGTCATCAACCAACAGTGGTGCAAGTGC...CCTTCTGCTCATTGTCCCCTTACAAGTATCACTTTTAGGATAACTAGCCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS-3UTR CAA 90 bp ATCCCTGATAGTAAACCCAAAGCAAACCTCAAATCTAAATCCATCCCTGCAAGCATGGAAGGCTCTGCTTaGGTGAAAATGAGTAGTTCT +
Preference number: 5 (lower is better)
Translates to: IPDSKPKANLKSKSIPASMEGSA*VKMSSS
Trigger: AGAACTACTCATTTTCACCAAAGCAGAGCCTTCCAT...GCTTGCAGGGATGGATTTAGATTTGAGGTTTGCTTTGGGTTTACTATCAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp CTTGAGCTCGGCGCCGCCTTCTCGGTGGTGCCGGGCTaGCGCTTCCAGGAGGTTCTGATTTGGGTCCGCGTT +
Preference number: 6 (lower is better)
Translates to: LELGAAFSVVPG*RFQEVLIWVRV
Trigger: AACGCGGACCCAAATCAGAACCTCCTGGAAGCGGCAGCCCGGCACCACCGAGAAGGCGGCGCCGAGCTCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp CGGCTTCGCTGCCAGCTGTGGGCTGTGGTGCTGCGACTTCTCCTCTaGCTTCGACTGCGACTACAGCTGCTACTGCGGCTTCGACCCCGG +
Preference number: 6 (lower is better)
Translates to: RLRCQLWAVVLRLLL*LRLRLQLLLRLRPR
Trigger: CCGGGGTCGAAGCCGCAGTAGCAGCTGTAGTCGCAGTCGAAGCAAGAGGAGAAGTCGCAGCACCACAGCCCACAGCTGGCAGCGAAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 72 bp TCTTCAGCAGGAAGGGATCTCCGCTGGGAATCATCTTaGGCTCGGCGCCGCCTTCTCGGTGGTGCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: SSAGRDLRWESS*ARRRLLGGAGL
Trigger: CAGCCCGGCACCACCGAGAAGGCGGCGCCGAGCTCAAGATGATTCCCAGCGGAGATCCCTTCCTGCTGAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp GGGCTGTGGTGCTGCGACTTCTCCTCTTGCTTCGACTaGGACTACAGCTGCTACTGCGGCTTCGACCCCGGG +
Preference number: 6 (lower is better)
Translates to: GLWCCDFSSCFD*DYSCYCGFDPG
Trigger: CCCGGGGTCGAAGCCGCAGTAGCAGCTGTAGTCGCAGTCGAAGCAAGAGGAGAAGTCGCAGCACCACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp ACTGTTTCCTTCTTCAGCAGGAAGGGATCTCCGCTGGGAATCATCTaGAGCTCGGCGCCGCCTTCTCGGTGGTGCCGGGCTGCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: TVSFFSRKGSPLGII*SSAPPSRWCRAAAS
Trigger: GGAAGCGGCAGCCCGGCACCACCGAGAAGGCGGCGCCGAGCTCAAGATGATTCCCAGCGGAGATCCCTTCCTGCTGAAGAAGGAAACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp TTCTGGAGCCTGATCTCTGAGAAGGGCTCCTGGTGCTaGGGCTCCGGTCCCGGCTATAGCTTCGGCTTCGCT +
Preference number: 6 (lower is better)
Translates to: FWSLISEKGSWC*GSGPGYSFGFA
Trigger: AGCGAAGCCGAAGCTATAGCCGGGACCGGAGCCGCAGCACCAGGAGCCCTTCTCAGAGATCAGGCTCCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp CCTTTCTGGAGCCTGATCTCTGAGAAGGGCTCCTGGTaGTGCGGCTCCGGTCCCGGCTATAGCTTCGGCTTC +
Preference number: 6 (lower is better)
Translates to: PFWSLISEKGSW*CGSGPGYSFGF
Trigger: GAAGCCGAAGCTATAGCCGGGACCGGAGCCGCAGCACCAGGAGCCCTTCTCAGAGATCAGGCTCCAGAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp TGGGCTGCAGGGCTGGTGTGGCTGGAGCTAGGGCGGTaGAGGCTGGAAAGGCCTTCACTTGTTTGGCCAGAA +
Preference number: 6 (lower is better)
Translates to: WAAGLVWLELGR*RLERPSLVWPE
Trigger: TTCTGGCCAAACAAGTGAAGGCCTTTCCAGCCTCCACCGCCCTAGCTCCAGCCACACCAGCCCTGCAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp GGCTGGGAGGGTGCTGCAGGTCCTGACCTGAGAAGATaGGGTGAAGCAGTGGGTGAAGATGGAGGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: GWEGAAGPDLRR*GEAVGEDGGLW
Trigger: CCACAGCCCTCCATCTTCACCCACTGCTTCACCCCATCTTCTCAGGTCAGGACCTGCAGCACCCTCCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp TTCTTCAGCAGGAAGGGATCTCCGCTGGGAATCATCTaGAGCTCGGCGCCGCCTTCTCGGTGGTGCCGGGCT +
Preference number: 6 (lower is better)
Translates to: FFSRKGSPLGII*SSAPPSRWCRA
Trigger: AGCCCGGCACCACCGAGAAGGCGGCGCCGAGCTCAAGATGATTCCCAGCGGAGATCCCTTCCTGCTGAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 72 bp CGGCTTCGACCCCGGGATCTTGATCGCTCCCTTGTATaGCTCCGAGATCGGCTTCGGGACTGGCTGCAACTG +
Preference number: 6 (lower is better)
Translates to: RLRPRDLDRSLV*LRDRLRDWLQL
Trigger: CAGTTGCAGCCAGTCCCGAAGCCGATCTCGGAGTCATACAAGGGAGCGATCAAGATCCCGGGGTCGAAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp GCCAGCTGTGGGCTGTGGTGCTGCGACTTCTCCTCTTaGTTCGACTGCGACTACAGCTGCTACTGCGGCTTC +
Preference number: 6 (lower is better)
Translates to: ASCGLWCCDFSS*FDCDYSCYCGF
Trigger: GAAGCCGCAGTAGCAGCTGTAGTCGCAGTCGAAGCAAGAGGAGAAGTCGCAGCACCACAGCCCACAGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp AGCTTCGGCTTCGCTGCCAGCTGTGGGCTGTGGTGCTaGGACTTCTCCTCTTGCTTCGACTGCGACTACAGC +
Preference number: 6 (lower is better)
Translates to: SFGFAASCGLWC*DFSSCFDCDYS
Trigger: GCTGTAGTCGCAGTCGAAGCAAGAGGAGAAGTCGCAGCACCACAGCCCACAGCTGGCAGCGAAGCCGAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp CTCTTCTCCACCATCCTCGTCTACAGCCACCGTGGTTaGTCGGAACATGGGCCCGCTTCCCGGTGCACATTC +
Preference number: 6 (lower is better)
Translates to: LFSTILVYSHRG*SEHGPASRCTF
Trigger: GAATGTGCACCGGGAAGCGGGCCCATGTTCCGACCAACCACGGTGGCTGTAGACGAGGATGGTGGAGAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp TATCCTCTTCTCCACCATCCTCGTCTACAGCCACCGTaGTTGGTCGGAACATGGGCCCGCTTCCCGGTGCAC +
Preference number: 6 (lower is better)
Translates to: YPLLHHPRLQPP*LVGTWARFPVH
Trigger: GTGCACCGGGAAGCGGGCCCATGTTCCGACCAACCACGGTGGCTGTAGACGAGGATGGTGGAGAAGAGGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp GGCTATAGCTTCGGCTTCGCTGCCAGCTGTGGGCTGTaGTGCTGCGACTTCTCCTCTTGCTTCGACTGCGAC +
Preference number: 6 (lower is better)
Translates to: GYSFGFAASCGL*CCDFSSCFDCD
Trigger: GTCGCAGTCGAAGCAAGAGGAGAAGTCGCAGCACCACAGCCCACAGCTGGCAGCGAAGCCGAAGCTATAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp CCTCTTCTCCACCATCCTCGTCTACAGCCACCGTGGTaGGTCGGAACATGGGCCCGCTTCCCGGTGCACATT +
Preference number: 6 (lower is better)
Translates to: PLLHHPRLQPPW*VGTWARFPVHI
Trigger: AATGTGCACCGGGAAGCGGGCCCATGTTCCGACCAACCACGGTGGCTGTAGACGAGGATGGTGGAGAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp GGTGGTGCCGGGCTGCCGCTTCCAGGAGGTTCTGATTaGGGTCCGCGTTCAGAATCAGCTGCGGCTGATGAT +
Preference number: 6 (lower is better)
Translates to: GGAGLPLPGGSD*GPRSESAAADD
Trigger: ATCATCAGCCGCAGCTGATTCTGAACGCGGACCCAAATCAGAACCTCCTGGAAGCGGCAGCCCGGCACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp TACTGCGGCTTCGACCCCGGGATCTTGATCGCTCCCTaGTATGACTCCGAGATCGGCTTCGGGACTGGCTGC +
Preference number: 6 (lower is better)
Translates to: YCGFDPGILIAP*YDSEIGFGTGC
Trigger: GCAGCCAGTCCCGAAGCCGATCTCGGAGTCATACAAGGGAGCGATCAAGATCCCGGGGTCGAAGCCGCAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp TTCGACTGCGACTACAGCTGCTACTGCGGCTTCGACCCCGGGATCTaGATCGCTCCCTTGTATGACTCCGAGATCGGCTTCGGGACTGGC +
Preference number: 6 (lower is better)
Translates to: FDCDYSCYCGFDPGI*IAPLYDSEIGFGTG
Trigger: GCCAGTCCCGAAGCCGATCTCGGAGTCATACAAGGGAGCGATCAAGATCCCGGGGTCGAAGCCGCAGTAGCAGCTGTAGTCGCAGTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp GCCAGAAGCTGCTGCTGGATGTGCTGCTGTGCAGCCTGCTGGAGCTaGCTGTACTTCTCCATCTCCTCAGGGGTGAAGGTGATGGGCTGG +
Preference number: 6 (lower is better)
Translates to: ARSCCWMCCCAACWS*LYFSISSGVKVMGW
Trigger: CCAGCCCATCACCTTCACCCCTGAGGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTGCACAGCAGCACATCCAGCAGCAGCTTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 72 bp AGAGCTGCTAGAATAAGAGCGCCGGGAGGAACGATGTaGGGAATGGCGATGGCCAGACCGAGAGCGGCTACG +
Preference number: 6 (lower is better)
Translates to: RAARIRAPGGTM*GMAMARPRAAT
Trigger: CGTAGCCGCTCTCGGTCTGGCCATCGCCATTCCTCACATCGTTCCTCCCGGCGCTCTTATTCTAGCAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 72 bp TGGGGTAGAGGGCAGCGTGTGGGACGGGATGAAAGGTaGAGGGCCCAGGATGGATGGCTGAGGCAGGAATTA +
Preference number: 6 (lower is better)
Translates to: WGRGQRVGRDER*RAQDGWLRQEL
Trigger: TAATTCCTGCCTCAGCCATCCATCCTGGGCCCTTCACCTTTCATCCCGTCCCACACGCTGCCCTCTACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp GCCAGAAGCTGCTGCTGGATGTGCTGCTGTGCAGCCTaGTGGAGCTTGCTGTACTTCTCCATCTCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: ARSCCWMCCCAA*WSLLYFSISSG
Trigger: CCCTGAGGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTGCACAGCAGCACATCCAGCAGCAGCTTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp GTGGTGCCGGGCTGCCGCTTCCAGGAGGTTCTGATTTaGGTCCGCGTTCAGAATCAGCTGCGGCTGATGATT +
Preference number: 6 (lower is better)
Translates to: VVPGCRFQEVLI*VRVQNQLRLMI
Trigger: AATCATCAGCCGCAGCTGATTCTGAACGCGGACCCAAATCAGAACCTCCTGGAAGCGGCAGCCCGGCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp CTGGGTTGGCTCCGATGGCTGGACCGGCTGCTATGTTaGGTGTTAGCTCTCCGCTGGCAGGAGGAAGTTGGT +
Preference number: 6 (lower is better)
Translates to: LGWLRWLDRLLC*VLALRWQEEVG
Trigger: ACCAACTTCCTCCTGCCAGCGGAGAGCTAACACCAAACATAGCAGCCGGTCCAGCCATCGGAGCCAACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp TGCCAGCTGTGGGCTGTGGTGCTGCGACTTCTCCTCTaGCTTCGACTGCGACTACAGCTGCTACTGCGGCTT +
Preference number: 6 (lower is better)
Translates to: CQLWAVVLRLLL*LRLRLQLLLRL
Trigger: AAGCCGCAGTAGCAGCTGTAGTCGCAGTCGAAGCAAGAGGAGAAGTCGCAGCACCACAGCCCACAGCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp CGCCTTCTCGGTGGTGCCGGGCTGCCGCTTCCAGGAGGTTCTGATTaGGGTCCGCGTTCAGAATCAGCTGCGGCTGATGATTTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: RLLGGAGLPLPGGSD*GPRSESAAADDLFF
Trigger: GAAGAACAAATCATCAGCCGCAGCTGATTCTGAACGCGGACCCAAATCAGAACCTCCTGGAAGCGGCAGCCCGGCACCACCGAGAAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp TCACCACTACTGGGTTGGCTCCGATGGCTGGACCGGCTGCTATGTTaGGTGTTAGCTCTCCGCTGGCAGGAGGAAGTTGGTGGTTCACCT +
Preference number: 6 (lower is better)
Translates to: SPLLGWLRWLDRLLC*VLALRWQEEVGGSP
Trigger: AGGTGAACCACCAACTTCCTCCTGCCAGCGGAGAGCTAACACCAAACATAGCAGCCGGTCCAGCCATCGGAGCCAACCCAGTAGTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 72 bp ACTACAGCTGCTACTGCGGCTTCGACCCCGGGATCTTaGTCGCTCCCTTGTATGACTCCGAGATCGGCTTCG +
Preference number: 6 (lower is better)
Translates to: TTAATAASTPGS*SLPCMTPRSAS
Trigger: CGAAGCCGATCTCGGAGTCATACAAGGGAGCGATCAAGATCCCGGGGTCGAAGCCGCAGTAGCAGCTGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp TCTGCCCCTGGGCTTGCTGCTGTCTTACTACAGCCTTaGGGCTTGGGAGAGCTGCTTTTTCTGTTCTCGGGG +
Preference number: 6 (lower is better)
Translates to: SAPGLAAVLLQP*GLGELLFLFSG
Trigger: CCCCGAGAACAGAAAAAGCAGCTCTCCCAAGCCGCAAGGCTGTAGTAAGACAGCAGCAAGCCCAGGGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp ACATATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCTaGTACAGGCAGCCCCTGATGCAGGTTCATCCACTC +
Preference number: 6 (lower is better)
Translates to: TYGYPQAPACSG*YRQPLMQVHPL
Trigger: GAGTGGATGAACCTGCATCAGGGGCTGCCTGTAGCAGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp TGCGACTTCTCCTCTTGCTTCGACTGCGACTACAGCTaGTACTGCGGCTTCGACCCCGGGATCTTGATCGCT +
Preference number: 6 (lower is better)
Translates to: CDFSSCFDCDYS*YCGFDPGILIA
Trigger: AGCGATCAAGATCCCGGGGTCGAAGCCGCAGTAGCAGCTGTAGTCGCAGTCGAAGCAAGAGGAGAAGTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp GCTGGAAAGGCCTTCACTTGTTTGGCCAGAAGCTGCTaGTGGATGTGCTGCTGTGCAGCCTGCTGGAGCTTG +
Preference number: 6 (lower is better)
Translates to: AGKAFTCLARSC*WMCCCAACWSL
Trigger: CAAGCTCCAGCAGGCTGCACAGCAGCACATCCAGCAGCAGCTTCTGGCCAAACAAGTGAAGGCCTTTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp CATCCTCGTCTACAGCCACCGTGGTTGGTCGGAACATaGGCCCGCTTCCCGGTGCACATTCAGCTTGTTTTC +
Preference number: 6 (lower is better)
Translates to: HPRLQPPWLVGT*ARFPVHIQLVF
Trigger: GAAAACAAGCTGAATGTGCACCGGGAAGCGGGCCCATGTTCCGACCAACCACGGTGGCTGTAGACGAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp TACTTCTCCATCTCCTCAGGGGTGAAGGTGATGGGCTaGCTCTCGAGAGGAGCCAAGGAGGCATCCTCAGTC +
Preference number: 6 (lower is better)
Translates to: YFSISSGVKVMG*LSRGAKEASSV
Trigger: GACTGAGGATGCCTCCTTGGCTCCTCTCGAGAGCCAGCCCATCACCTTCACCCCTGAGGAGATGGAGAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp GGAAAGGCCTTCACTTGTTTGGCCAGAAGCTGCTGCTaGATGTGCTGCTGTGCAGCCTGCTGGAGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: GKAFTCLARSCC*MCCCAACWSLL
Trigger: CAGCAAGCTCCAGCAGGCTGCACAGCAGCACATCCAGCAGCAGCTTCTGGCCAAACAAGTGAAGGCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp GGGCCCGCTTCCCGGTGCACATTCAGCTTGTTTTCTTaGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTT +
Preference number: 6 (lower is better)
Translates to: GPASRCTFSLFS*LCQLMEPPKGF
Trigger: AAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCGGGAAGCGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp GACTACAGCTGCTACTGCGGCTTCGACCCCGGGATCTaGATCGCTCCCTTGTATGACTCCGAGATCGGCTTC +
Preference number: 6 (lower is better)
Translates to: DYSCYCGFDPGI*IAPLYDSEIGF
Trigger: GAAGCCGATCTCGGAGTCATACAAGGGAGCGATCAAGATCCCGGGGTCGAAGCCGCAGTAGCAGCTGTAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp TGCTGCTGGATGTGCTGCTGTGCAGCCTGCTGGAGCTaGCTGTACTTCTCCATCTCCTCAGGGGTGAAGGTG +
Preference number: 6 (lower is better)
Translates to: CCWMCCCAACWS*LYFSISSGVKV
Trigger: CACCTTCACCCCTGAGGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTGCACAGCAGCACATCCAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp AAGGTCTGGGGCTATAGGCAGCAAGCTGGATTCCACAGGGCCTGGTaGACTGCCACTATCCAGAGACTCCAGAGTATCCCCATCACTGGG +
Preference number: 6 (lower is better)
Translates to: KVWGYRQQAGFHRAW*TATIQRLQSIPITG
Trigger: CCCAGTGATGGGGATACTCTGGAGTCTCTGGATAGTGGCAGTCAACCAGGCCCTGTGGAATCCAGCTTGCTGCCTATAGCCCCAGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp CACCGTGGTTGGTCGGAACATGGGCCCGCTTCCCGGTaGACATTCAGCTTGTTTTCTTTGCTCTGCCAACTC +
Preference number: 6 (lower is better)
Translates to: HRGWSEHGPASR*TFSLFSLLCQL
Trigger: GAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCGGGAAGCGGGCCCATGTTCCGACCAACCACGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp CCAGGCTCTGAAGGCCCAGCCACAGCGGCTTCCTTTTaGAGCTCAGAAGCTTCACTCACTGTTCTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: PGSEGPATAASF*SSEASLTVLSA
Trigger: GGCAGAAAGAACAGTGAGTGAAGCTTCTGAGCTGCAAAAGGAAGCCGCTGTGGCTGGGCCTTCAGAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp CTTCAGGACTGCAGTCACTTTCTGACCCCCTTCCTGTaGCAGTATTGCTATTCTGGGAGGGCAGGCCTGCTC +
Preference number: 6 (lower is better)
Translates to: LQDCSHFLTPFL*QYCYSGRAGLL
Trigger: GAGCAGGCCTGCCCTCCCAGAATAGCAATACTGGCACAGGAAGGGGGTCAGAAAGTGACTGCAGTCCTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp CTGGGCTTGCTGCTGTCTTACTACAGCCTTGCGGCTTaGGAGAGCTGCTTTTTCTGTTCTCGGGGGCACTCT +
Preference number: 6 (lower is better)
Translates to: LGLLLSYYSLAA*ESCFFCSRGHS
Trigger: AGAGTGCCCCCGAGAACAGAAAAAGCAGCTCTCCCAAGCCGCAAGGCTGTAGTAAGACAGCAGCAAGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp TTCTGCCCCTGGGCTTGCTGCTGTCTTACTACAGCCTaGCGGCTTGGGAGAGCTGCTTTTTCTGTTCTCGGG +
Preference number: 6 (lower is better)
Translates to: FCPWACCCLTTA*RLGRAAFSVLG
Trigger: CCCGAGAACAGAAAAAGCAGCTCTCCCAAGCCGCAAGGCTGTAGTAAGACAGCAGCAAGCCCAGGGGCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp GGCTATAGGCAGCAAGCTGGATTCCACAGGGCCTGGTaGACTGCCACTATCCAGAGACTCCAGAGTATCCCC +
Preference number: 6 (lower is better)
Translates to: GYRQQAGFHRAW*TATIQRLQSIP
Trigger: GGGGATACTCTGGAGTCTCTGGATAGTGGCAGTCAACCAGGCCCTGTGGAATCCAGCTTGCTGCCTATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp CATCTTTATCCTCTTCTCCACCATCCTCGTCTACAGCCACCGTGGTaGGTCGGAACATGGGCCCGCTTCCCGGTGCACATTCAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: HLYPLLHHPRLQPPW*VGTWARFPVHIQLV
Trigger: AACAAGCTGAATGTGCACCGGGAAGCGGGCCCATGTTCCGACCAACCACGGTGGCTGTAGACGAGGATGGTGGAGAAGAGGATAAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 72 bp GCTATAGGCAGCAAGCTGGATTCCACAGGGCCTGGTTaGCTGCCACTATCCAGAGACTCCAGAGTATCCCCA +
Preference number: 6 (lower is better)
Translates to: AIGSKLDSTGPG*LPLSRDSRVSP
Trigger: TGGGGATACTCTGGAGTCTCTGGATAGTGGCAGTCAACCAGGCCCTGTGGAATCCAGCTTGCTGCCTATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp TCTTCAGTTTCTGACATATGGCTACCCCCAGGCTCCTaGTTGTTCAGGCTGCTACAGGCAGCCCCTGATGCA +
Preference number: 6 (lower is better)
Translates to: SSVSDIWLPPGS*LFRLLQAAPDA
Trigger: TGCATCAGGGGCTGCCTGTAGCAGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATATGTCAGAAACTGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp GAATGGCGATGGCCAGACCGAGAGCGGCTACGAGAATaGTCACTACCGGAGTCTTCATCTTCCTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: EWRWPDRERLRE*SLPESSSSSSS
Trigger: AGAAGAGGAGGAAGATGAAGACTCCGGTAGTGAGCATTCTCGTAGCCGCTCTCGGTCTGGCCATCGCCATTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp TCTTCCTCCTCCTCCTCTTCCTCCTCCTCACTGTACTaGGATGGAGACTTCTGGTGCAGTCGGTGTGAGGAA +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSLY*DGDFWCSRCEE
Trigger: TTCCTCACACCGACTGCACCAGAAGTCTCCATCCCAGTACAGTGAGGAGGAGGAAGAGGAGGAGGAGGAAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp CTGCAGTCACTTTCTGACCCCCTTCCTGTGCCAGTATaGCTATTCTGGGAGGGCAGGCCTGCTCCTTTACTG +
Preference number: 6 (lower is better)
Translates to: LQSLSDPLPVPV*LFWEGRPAPLL
Trigger: CAGTAAAGGAGCAGGCCTGCCCTCCCAGAATAGCAATACTGGCACAGGAAGGGGGTCAGAAAGTGACTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp TACTCTCTACACTCTGCTCATCTTCCCCTCCTCCGGAGCCTTTCTTaGTTTCAGTTTTACCTCCAGGCTCTGAAGGCCCAGCCACAGCGG +
Preference number: 6 (lower is better)
Translates to: YSLHSAHLPLLRSLS*FQFYLQALKAQPQR
Trigger: CCGCTGTGGCTGGGCCTTCAGAGCCTGGAGGTAAAACTGAAACAAAGAAAGGCTCCGGAGGAGGGGAAGATGAGCAGAGTGTAGAGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 72 bp GGGTCTGATAAGGGACCAGCTGCTTCCTCTGAGAACTaGTGCCCAAATGGAGCATCACTACTCCTTGGGGAC +
Preference number: 6 (lower is better)
Translates to: GSDKGPAASSEN*CPNGASLLLGD
Trigger: GTCCCCAAGGAGTAGTGATGCTCCATTTGGGCATCAGTTCTCAGAGGAAGCAGCTGGTCCCTTATCAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp CTGCTGTCTTACTACAGCCTTGCGGCTTGGGAGAGCTaGTTTTTCTGTTCTCGGGGGCACTCTTTGAGTGTG +
Preference number: 6 (lower is better)
Translates to: LLSYYSLAAWES*FFCSRGHSLSV
Trigger: CACACTCAAAGAGTGCCCCCGAGAACAGAAAAAGCAGCTCTCCCAAGCCGCAAGGCTGTAGTAAGACAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp TGCAGTCACTTTCTGACCCCCTTCCTGTGCCAGTATTaGTATTCTGGGAGGGCAGGCCTGCTCCTTTACTGT +
Preference number: 6 (lower is better)
Translates to: CSHFLTPFLCQY*YSGRAGLLLYC
Trigger: ACAGTAAAGGAGCAGGCCTGCCCTCCCAGAATAGCAATACTGGCACAGGAAGGGGGTCAGAAAGTGACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp CCAGTGCCATCAGTATCTCCCACCTTCTGCACCCCTTaGTCAGAGCTCTTCTCATCAGCCTTCGTTCCATCT +
Preference number: 6 (lower is better)
Translates to: PVPSVSPTFCTP*SELFSSAFVPS
Trigger: AGATGGAACGAAGGCTGATGAGAAGAGCTCTGACCAAGGGGTGCAGAAGGTGGGAGATACTGATGGCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp CTGGACCGGCTGCTATGTTTGGTGTTAGCTCTCCGCTaGCAGGAGGAAGTTGGTGGTTCACCTTTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: LDRLLCLVLALR*QEEVGGSPLCF
Trigger: GAAACACAAAGGTGAACCACCAACTTCCTCCTGCCAGCGGAGAGCTAACACCAAACATAGCAGCCGGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp TCACTATCCTCATCACCACTACTGGGTTGGCTCCGATaGCTGGACCGGCTGCTATGTTTGGTGTTAGCTCTC +
Preference number: 6 (lower is better)
Translates to: SLSSSPLLGWLR*LDRLLCLVLAL
Trigger: GAGAGCTAACACCAAACATAGCAGCCGGTCCAGCCATCGGAGCCAACCCAGTAGTGGTGATGAGGATAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp GAAGCATCATCACTATCCTCATCACCACTACTGGGTTaGCTCCGATGGCTGGACCGGCTGCTATGTTTGGTG +
Preference number: 6 (lower is better)
Translates to: EASSLSSSPLLG*LRWLDRLLCLV
Trigger: CACCAAACATAGCAGCCGGTCCAGCCATCGGAGCCAACCCAGTAGTGGTGATGAGGATAGTGATGATGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp GTGAGGAAGCATCATCACTATCCTCATCACCACTACTaGGTTGGCTCCGATGGCTGGACCGGCTGCTATGTT +
Preference number: 6 (lower is better)
Translates to: VRKHHHYPHHHY*VGSDGWTGCYV
Trigger: AACATAGCAGCCGGTCCAGCCATCGGAGCCAACCCAGTAGTGGTGATGAGGATAGTGATGATGCTTCCTCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp GGATGGATGGCTGAGGCAGGAATTATATGGATAGGGTaGCTAGCAAGAAAGGTGGCAGGGTGGCCAGGGATA +
Preference number: 6 (lower is better)
Translates to: GWMAEAGIIWIG*LARKVAGWPGI
Trigger: TATCCCTGGCCACCCTGCCACCTTTCTTGCTAGCCACCCTATCCATATAATTCCTGCCTCAGCCATCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp CACTCTGCTCATCTTCCCCTCCTCCGGAGCCTTTCTTaGTTTCAGTTTTACCTCCAGGCTCTGAAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: HSAHLPLLRSLS*FQFYLQALKAQ
Trigger: CTGGGCCTTCAGAGCCTGGAGGTAAAACTGAAACAAAGAAAGGCTCCGGAGGAGGGGAAGATGAGCAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp GGAAGCATCATCACTATCCTCATCACCACTACTGGGTaGGCTCCGATGGCTGGACCGGCTGCTATGTTTGGT +
Preference number: 6 (lower is better)
Translates to: GSIITILITTTG*APMAGPAAMFG
Trigger: ACCAAACATAGCAGCCGGTCCAGCCATCGGAGCCAACCCAGTAGTGGTGATGAGGATAGTGATGATGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp TCTTCAGGACTGCAGTCACTTTCTGACCCCCTTCCTGTGCCAGTATaGCTATTCTGGGAGGGCAGGCCTGCTCCTTTACTGTCATCTCCT +
Preference number: 6 (lower is better)
Translates to: SSGLQSLSDPLPVPV*LFWEGRPAPLLSSP
Trigger: AGGAGATGACAGTAAAGGAGCAGGCCTGCCCTCCCAGAATAGCAATACTGGCACAGGAAGGGGGTCAGAAAGTGACTGCAGTCCTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp CTGCTTCCTCTGAGAACTGATGCCCAAATGGAGCATCACTACTCCTaGGGGACCCTTCTTCTGGCTCTGAATGTTCCTGCTCTTCTCCCC +
Preference number: 6 (lower is better)
Translates to: LLPLRTDAQMEHHYS*GTLLLALNVPALLP
Trigger: GGGGAGAAGAGCAGGAACATTCAGAGCCAGAAGAAGGGTCCCCAAGGAGTAGTGATGCTCCATTTGGGCATCAGTTCTCAGAGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp GCTTCCCGGTGCACATTCAGCTTGTTTTCTTTGCTCTaGCAACTCATGGAGCCGCCGAAGGGCTTTTTCTTG +
Preference number: 6 (lower is better)
Translates to: ASRCTFSLFSLL*QLMEPPKGFFL
Trigger: CAAGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCGGGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp TCCTCCTCCTCACTGTACTGGGATGGAGACTTCTGGTaGAGTCGGTGTGAGGAAGCATCATCACTATCCTCA +
Preference number: 6 (lower is better)
Translates to: SSSSLYWDGDFW*SRCEEASSLSS
Trigger: TGAGGATAGTGATGATGCTTCCTCACACCGACTGCACCAGAAGTCTCCATCCCAGTACAGTGAGGAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp AGTAGGATGCTTGGGTCCCTGGCCTGCTTTTGTTGCTaGGGTGGCCTGAGAAATGTCTTTAGGATTGGACTC +
Preference number: 6 (lower is better)
Translates to: SRMLGSLACFCC*GGLRNVFRIGL
Trigger: GAGTCCAATCCTAAAGACATTTCTCAGGCCACCCCAGCAACAAAAGCAGGCCAGGGACCCAAGCATCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp TCTTCCTCCTCCTCACTGTACTGGGATGGAGACTTCTaGTGCAGTCGGTGTGAGGAAGCATCATCACTATCC +
Preference number: 6 (lower is better)
Translates to: SSSSSLYWDGDF*CSRCEEASSLS
Trigger: GGATAGTGATGATGCTTCCTCACACCGACTGCACCAGAAGTCTCCATCCCAGTACAGTGAGGAGGAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp GGAGGAAGTTGGTGGTTCACCTTTGTGTTTCCTCCCACTGTGATCTaGGCAACTGCTACCACCCCCACCATCATCCTTCTTGCCACTGTT +
Preference number: 6 (lower is better)
Translates to: GGSWWFTFVFPPTVI*ATATTPTIILLATV
Trigger: AACAGTGGCAAGAAGGATGATGGTGGGGGTGGTAGCAGTTGCCAAGATCACAGTGGGAGGAAACACAAAGGTGAACCACCAACTTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 72 bp CGGTTCTCTAGGATCAAGGCTCTGGAGATGATCCTTTaGGGAGCCTGCGACATCTTTTGGCTTTTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: RFSRIKALEMIL*GACDIFWLFCP
Trigger: GGGACAGAAAAGCCAAAAGATGTCGCAGGCTCCTCAAAGGATCATCTCCAGAGCCTTGATCCTAGAGAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp AAAGAATGGACCAGTAGGATGCTTGGGTCCCTGGCCTaGTTTTGTTGCTGGGGTGGCCTGAGAAATGTCTTT +
Preference number: 6 (lower is better)
Translates to: KEWTSRMLGSLA*FCCWGGLRNVF
Trigger: AAAGACATTTCTCAGGCCACCCCAGCAACAAAAGCAGGCCAGGGACCCAAGCATCCTACTGGTCCATTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp TTTGGTGTTAGCTCTCCGCTGGCAGGAGGAAGTTGGTaGTTCACCTTTGTGTTTCCTCCCACTGTGATCTTG +
Preference number: 6 (lower is better)
Translates to: FGVSSPLAGGSW*FTFVFPPTVIL
Trigger: CAAGATCACAGTGGGAGGAAACACAAAGGTGAACCACCAACTTCCTCCTGCCAGCGGAGAGCTAACACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp TGGTGGTTCACCTTTGTGTTTCCTCCCACTGTGATCTaGGCAACTGCTACCACCCCCACCATCATCCTTCTT +
Preference number: 6 (lower is better)
Translates to: WWFTFVFPPTVI*ATATTPTIILL
Trigger: AAGAAGGATGATGGTGGGGGTGGTAGCAGTTGCCAAGATCACAGTGGGAGGAAACACAAAGGTGAACCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp CCCCTGTTCCTTCTTCCCGTTTCATCCTTTTCAACTTGGACAGTGTaGAGGCAAGGGACCCTCCATCCTGAGGGTCTTCATCTTCTTTCT +
Preference number: 6 (lower is better)
Translates to: PLFLLPVSSFSTWTV*RQGTLHPEGLHLLS
Trigger: AGAAAGAAGATGAAGACCCTCAGGATGGAGGGTCCCTTGCCTCAACACTGTCCAAGTTGAAAAGGATGAAACGGGAAGAAGGAACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp CCTTCTGAAGAGAGCACTACATCCTGCTCCTCTTCCTaGCTTTTATTCGGTTCTCTAGGATCAAGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: PSEESTTSCSSS*LLFGSLGSRLW
Trigger: CCAGAGCCTTGATCCTAGAGAACCGAATAAAAGCCAGGAAGAGGAGCAGGATGTAGTGCTCTCTTCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp CTTCTTCCCGTTTCATCCTTTTCAACTTGGACAGTGTaGAGGCAAGGGACCCTCCATCCTGAGGGTCTTCAT +
Preference number: 6 (lower is better)
Translates to: LLPVSSFSTWTV*RQGTLHPEGLH
Trigger: ATGAAGACCCTCAGGATGGAGGGTCCCTTGCCTCAACACTGTCCAAGTTGAAAAGGATGAAACGGGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp CGGCTCCAAAGCCACAAGAAGAAACAGCACTTGCACCACTGTTGGTaGATGACTCATCTTTATCCTCTTCTCCACCATCCTCGTCTACAG +
Preference number: 6 (lower is better)
Translates to: RLQSHKKKQHLHHCW*MTHLYPLLHHPRLQ
Trigger: CTGTAGACGAGGATGGTGGAGAAGAGGATAAAGATGAGTCATCAACCAACAGTGGTGCAAGTGCTGTTTCTTCTTGTGGCTTTGGAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 72 bp TTTCTGTTCTCGGGGGCACTCTTTGAGTGTGCACTATaGTCCCCTTCCATCTGTTCACTGGCTCTCATAAAG +
Preference number: 6 (lower is better)
Translates to: FLFSGALFECAL*SPSICSLALIK
Trigger: CTTTATGAGAGCCAGTGAACAGATGGAAGGGGATCATAGTGCACACTCAAAGAGTGCCCCCGAGAACAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp AAGTCGGCTCCAAAGCCACAAGAAGAAACAGCACTTGCACCACTGTaGGTTGATGACTCATCTTTATCCTCTTCTCCACCATCCTCGTCT +
Preference number: 6 (lower is better)
Translates to: KSAPKPQEETALAPL*VDDSSLSSSPPSSS
Trigger: AGACGAGGATGGTGGAGAAGAGGATAAAGATGAGTCATCAACCAACAGTGGTGCAAGTGCTGTTTCTTCTTGTGGCTTTGGAGCCGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp TCAGCCTTCGTTCCATCTTCTGAGCTCCCTTCCTCTGCATGGTCCTaGAAAACGGATGCTATTGATTCAAGTTTGACGGGAGCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: SAFVPSSELPSSAWS*KTDAIDSSLTGAFL
Trigger: CAAGAAAGCTCCCGTCAAACTTGAATCAATAGCATCCGTTTTCAAGGACCATGCAGAGGAAGGGAGCTCAGAAGATGGAACGAAGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp AAAATGAGTAGTTCTGATGGCCACTGGAGGGCAGTGCTTTCATCCTaGCTTAAAACTGGAAAGAATGGACCAGTAGGATGCTTGGGTCCC +
Preference number: 6 (lower is better)
Translates to: KMSSSDGHWRAVLSS*LKTGKNGPVGCLGP
Trigger: GGGACCCAAGCATCCTACTGGTCCATTCTTTCCAGTTTTAAGCAAGGATGAAAGCACTGCCCTCCAGTGGCCATCAGAACTACTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp TATCTGTGGAGAAGTCGGCTCCAAAGCCACAAGAAGAAACAGCACTaGCACCACTGTTGGTTGATGACTCATCTTTATCCTCTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: YLWRSRLQSHKKKQH*HHCWLMTHLYPLLH
Trigger: GTGGAGAAGAGGATAAAGATGAGTCATCAACCAACAGTGGTGCAAGTGCTGTTTCTTCTTGTGGCTTTGGAGCCGACTTCTCCACAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp GGTTCTGATTTGGGTCCGCGTTCAGAATCAGCTGCGGCTGATGATTaGTTCTTCTTCCGTTTTCGTTTCTTGCGCTTCTTAGATTTCTCC +
Preference number: 6 (lower is better)
Translates to: GSDLGPRSESAAADD*FFFRFRFLRFLDFS
Trigger: GGAGAAATCTAAGAAGCGCAAGAAACGAAAACGGAAGAAGAACAAATCATCAGCCGCAGCTGATTCTGAACGCGGACCCAAATCAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp GGTCTTCATCTTCTTTCTTTCCATCAAGATTACCAGTaGCATCAGTATCTCCCACCTTCTGCACCCCTTGGT +
Preference number: 6 (lower is better)
Translates to: GLHLLSFHQDYQ*HQYLPPSAPLG
Trigger: ACCAAGGGGTGCAGAAGGTGGGAGATACTGATGGCACTGGTAATCTTGATGGAAAGAAAGAAGATGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp GTTCCATCTTCTGAGCTCCCTTCCTCTGCATGGTCCTaGAAAACGGATGCTATTGATTCAAGTTTGACGGGA +
Preference number: 6 (lower is better)
Translates to: VPSSELPSSAWS*KTDAIDSSLTG
Trigger: TCCCGTCAAACTTGAATCAATAGCATCCGTTTTCAAGGACCATGCAGAGGAAGGGAGCTCAGAAGATGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp GAATCAGCTGCGGCTGATGATTTGTTCTTCTTCCGTTTTCGTTTCTaGCGCTTCTTAGATTTCTCCCCAGACTCTGCCTTAGAACTCTTC +
Preference number: 6 (lower is better)
Translates to: ESAAADDLFFFRFRF*RFLDFSPDSALELF
Trigger: GAAGAGTTCTAAGGCAGAGTCTGGGGAGAAATCTAAGAAGCGCAAGAAACGAAAACGGAAGAAGAACAAATCATCAGCCGCAGCTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 72 bp TTCAAGTTTGACGGGAGCTTTCTTGGCAAAGGAAAATaGTACTCCCAATTTCTGCAGTGGGGGTCCCAGATT +
Preference number: 6 (lower is better)
Translates to: FKFDGSFLGKGK*YSQFLQWGSQI
Trigger: AATCTGGGACCCCCACTGCAGAAATTGGGAGTATCATTTTCCTTTGCCAAGAAAGCTCCCGTCAAACTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 72 bp AACTTGGACAGTGTTGAGGCAAGGGACCCTCCATCCTaGGGGTCTTCATCTTCTTTCTTTCCATCAAGATTA +
Preference number: 6 (lower is better)
Translates to: NLDSVEARDPPS*GSSSSFFPSRL
Trigger: TAATCTTGATGGAAAGAAAGAAGATGAAGACCCTCAGGATGGAGGGTCCCTTGCCTCAACACTGTCCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp AGCCACAAGAAGAAACAGCACTTGCACCACTGTTGGTaGATGACTCATCTTTATCCTCTTCTCCACCATCCT +
Preference number: 6 (lower is better)
Translates to: SHKKKQHLHHCW*MTHLYPLLHHP
Trigger: AGGATGGTGGAGAAGAGGATAAAGATGAGTCATCAACCAACAGTGGTGCAAGTGCTGTTTCTTCTTGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp CCAAAGCCACAAGAAGAAACAGCACTTGCACCACTGTaGGTTGATGACTCATCTTTATCCTCTTCTCCACCA +
Preference number: 6 (lower is better)
Translates to: PKPQEETALAPL*VDDSSLSSSPP
Trigger: TGGTGGAGAAGAGGATAAAGATGAGTCATCAACCAACAGTGGTGCAAGTGCTGTTTCTTCTTGTGGCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp AGAAGTCGGCTCCAAAGCCACAAGAAGAAACAGCACTaGCACCACTGTTGGTTGATGACTCATCTTTATCCT +
Preference number: 6 (lower is better)
Translates to: RSRLQSHKKKQH*HHCWLMTHLYP
Trigger: AGGATAAAGATGAGTCATCAACCAACAGTGGTGCAAGTGCTGTTTCTTCTTGTGGCTTTGGAGCCGACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp GCGGCTGATGATTTGTTCTTCTTCCGTTTTCGTTTCTaGCGCTTCTTAGATTTCTCCCCAGACTCTGCCTTA +
Preference number: 6 (lower is better)
Translates to: AADDLFFFRFRF*RFLDFSPDSAL
Trigger: TAAGGCAGAGTCTGGGGAGAAATCTAAGAAGCGCAAGAAACGAAAACGGAAGAAGAACAAATCATCAGCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS GCA 72 bp GCTTTCTTGGCAAAGGAAAATGATACTCCCAATTTCTaGAGTGGGGGTCCCAGATTATTCTTAATGCCAAAG +
Preference number: 6 (lower is better)
Translates to: AFLAKENDTPNF*SGGPRLFLMPK
Trigger: CTTTGGCATTAAGAATAATCTGGGACCCCCACTGCAGAAATTGGGAGTATCATTTTCCTTTGCCAAGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CCA 72 bp AGACTCTTCACATTTCTTATTGGACTTCCGGGTAGCTaGAAGCTTCCCTATCATTGGAAGAACAGGCTTATT +
Preference number: 6 (lower is better)
Translates to: RLFTFLIGLPGS*KLPYHWKNRLI
Trigger: AATAAGCCTGTTCTTCCAATGATAGGGAAGCTTCCAGCTACCCGGAAGTCCAATAAGAAATGTGAAGAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp ACGGATGCTATTGATTCAAGTTTGACGGGAGCTTTCTaGGCAAAGGAAAATGATACTCCCAATTTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: TDAIDSSLTGAF*AKENDTPNFCS
Trigger: ACTGCAGAAATTGGGAGTATCATTTTCCTTTGCCAAGAAAGCTCCCGTCAAACTTGAATCAATAGCATCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 72 bp GCATGGTCCTTGAAAACGGATGCTATTGATTCAAGTTaGACGGGAGCTTTCTTGGCAAAGGAAAATGATACT +
Preference number: 6 (lower is better)
Translates to: AWSLKTDAIDSS*TGAFLAKENDT
Trigger: AGTATCATTTTCCTTTGCCAAGAAAGCTCCCGTCAAACTTGAATCAATAGCATCCGTTTTCAAGGACCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS TCA 72 bp ATCTTGAAGAGACATTTCGGGCAAACTCTCTCTGCTTaGGATCTTTTAATCTCTGCTTGTGTGCATGATCAT +
Preference number: 6 (lower is better)
Translates to: ILKRHFGQTLSA*DLLISACVHDH
Trigger: ATGATCATGCACACAAGCAGAGATTAAAAGATCTCAAGCAGAGAGAGTTTGCCCGAAATGTCTCTTCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2
CDS CAA 90 bp CCTGCGACATCTTTTGGCTTTTCTGTCCCTTTAGCTTTAGCATCTTaGTTTCTTGAAAGTTTAAAGTCAAAGTATAAAGGATTACAACTG +
Preference number: 6 (lower is better)
Translates to: PATSFGFSVPLALAS*FLESLKSKYKGLQL
Trigger: CAGTTGTAATCCTTTATACTTTGACTTTAAACTTTCAAGAAACAAAGATGCTAAAGCTAAAGGGACAGAAAAGCCAAAAGATGTCGCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143842.2