Pregenerated sensors for GPATCH4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028069Ensembl transcript IDs: ENSMUST00000029707.13, ENSMUST00000166021.8, ENSMUST00000193398.2, ENSMUST00000194258.6
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTCAGACTTTTAAAAGAGACACTCCAAATATTCCTCCATCCTGATTCCTCTTCCGCATTGGCTCTCCTCTaGAGACTGGGGCTCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: FRLLKETLQIFLHPDSSSALALL*RLGLQS Trigger: GCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGC...GGAAGAGGAATCAGGATGGAGGAATATTTGGAGTGTCTCTTTTAAAAGTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| 3UTR-3UTR GCA 90 bp | AGACTTTTAAAAGAGACACTCCAAATATTCCTCCATCCTGATTCCTCTTCCCACCTGGGGCTCCAGAGCTaGTTGCAGAGTGTGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: RLLKETLQIFLHPDSSSHLGLQS*LQSVQK Trigger: TTTCTGCACACTCTGCAAGCAGCTCTGGAGCCCCAG...GTGGGAAGAGGAATCAGGATGGAGGAATATTTGGAGTGTCTCTTTTAAAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGACTTTTAAAAGAGACACTCCAAATATTCCTCCATCCTGATTCCTCTTCCCAGTATAGAATGCATTaGCTCTCCTCTGCAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: FRLLKETLQIFLHPDSSSQYRMH*LSSADW Trigger: CCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTG...GGAAGAGGAATCAGGATGGAGGAATATTTGGAGTGTCTCTTTTAAAAGTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| 3UTR GCA 72 bp | TGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTaGAGAGTGTGCAGAAACCCTGCCCTAAACCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: WLSSADWGSRAA*RVCRNPALNQA Trigger: AGCCTGGTTTAGGGCAGGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCTCCATCCTGATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCGGGCTCCAGAGCTGCTaGCAGAGTGTGCAGAAACCC | + |
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Preference number: 3 (lower is better) Translates to: FLHPDSSSHHPLAGELPGGLQSC*QSVQKP Trigger: GGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCC...GCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATCAGGATGGAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| 3UTR CCA 72 bp | GACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTaGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: DHVHPLSQYRMH*LSSADWGSRAA Trigger: AGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| 3UTR-3UTR CAA 90 bp | AGACTTTTAAAAGAGACACTCCAAATATTCCTCCATCCTGATTCCTCTTCCCACGGGCTCCAGAGCTGCTaGCAGAGTGTGCAGAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: RLLKETLQIFLHPDSSSHGLQSC*QSVQKP Trigger: GGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCC...GTGGGAAGAGGAATCAGGATGGAGGAATATTTGGAGTGTCTCTTTTAAAAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| 3UTR CAA 72 bp | TTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTaGCAGAGTGTGCAGAAACCCTGCCCTAAACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LALLCRLGLQSC*QSVQKPCPKPG Trigger: GCCTGGTTTAGGGCAGGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | CTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTAAGCTGGGTTTGGGGTaGCTGCGCTGGGTGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSQYRMHWLSSADWGSRAKLGLG*LRWVVS Trigger: GGAGACCACCCAGCGCAGTCACCCCAAACCCAGCTT...AGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GGACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCAAGCTGGGTTTGGGGTaGCTGCGCTGGGTGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQQVSQGTMSTPSASIECKLGLG*LRWVVS Trigger: GGAGACCACCCAGCGCAGTCACCCCAAACCCAGCTT...GCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCCAGAGCTGCTTGCAGAGTGTGCAGAAACCCTGCCCTAAACCAGGCTATTGGGTTTGGGGTGACTaGGCTGGGTGGTCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLQSCLQSVQKPCPKPGYWVWGD*AGWSPW Trigger: CCAAGGAGACCACCCAGCGCAGTCACCCCAAACCCA...ATAGCCTGGTTTAGGGCAGGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGGCTTGGCCTTCATGGTaGTACCAATCCGGGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GTMSTPSASIECIGSPLQAWPSW*YQSGQP Trigger: AGGCTGCCCGGATTGGTATCACCATGAAGGCCAAGC...CTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | TCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGTGGGTTTGGGGTGACTaGGCTGGGTGGTCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SASIECIGSPLQTGAPELWVWGD*AGWSPW Trigger: CCAAGGAGACCACCCAGCGCAGTCACCCCAAACCCA...CAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GGACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCTGGGTTTGGGGTGACTaGGCTGGGTGGTCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQQVSQGTMSTPSASIECWVWGD*AGWSPW Trigger: CCAAGGAGACCACCCAGCGCAGTCACCCCAAACCCA...GCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | CTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGGGCCCACTCTCTCCTaGAGCCTCTTCCTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSQYRMHWLSSADWGSRAGPTLS*SLFLLT Trigger: AGTGAGGAGGAAGAGGCTGCAGGAGAGAGTGGGCCC...AGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | TCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTGGTGACTGCGCTGGGTaGTCTCCTTGGAAAGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: STPSASIECIGSPLQTGAGDCAG*SPWKDV Trigger: GACGTCTTTCCAAGGAGACCACCCAGCGCAGTCACC...AGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | CTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTAGAAAGGCCTGCTCTTaGGCCTCCAGGCGAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSQYRMHWLSSADWGSRARKACS*ASRRAS Trigger: GCTTGCTCGCCTGGAGGCCCAAGAGCAGGCCTTTCT...AGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | GCAGACTGGGGCTCCAGAGCTGCTTGCAGAGTGTGCAGAAACCCTGCCCTAAACCTCACTGTCAGTCAGTaGTTGAGAGGTGCCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ADWGSRAACRVCRNPALNLTVSQ*LRGAQS Trigger: GCTCTGGGCACCTCTCAACCACTGACTGACAGTGAG...GTTTAGGGCAGGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCCCAGTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | GGGCTCCAGAGCTGCTTGCAGAGTGTGCAGAAACCCTGCCCTAAACCAGGCTATCTGTGCTCAGTTCTCTaGGCCCACTCTCTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLQSCLQSVQKPCPKPGYLCSVL*AHSLLQ Trigger: CTGCAGGAGAGAGTGGGCCCAGAGAACTGAGCACAG...ATAGCCTGGTTTAGGGCAGGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GCAGACTGGGGCTCCAGAGCTGCTTGCAGAGTGTGCAGAAACCCTGCCCTAAACTTTGAGCCTTTGAGCTaGGCCAGAAAGGCCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ADWGSRAACRVCRNPALNFEPLS*ARKACS Trigger: AGAGCAGGCCTTTCTGGCTCAGCTCAAAGGCTCAAA...GTTTAGGGCAGGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCCCAGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | CAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGGAGCCTTTGAGCCTTTaGGCTGAGCCAGAAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QGTMSTPSASIECIGSPLEPLSL*AEPERP Trigger: AGGCCTTTCTGGCTCAGCTCAAAGGCTCAAAGGCTC...CAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | CCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGACTGTCAGTCAGTGGTTaGGAGGTGCCCAGAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: PLSQYRMHWLSSADWGSRLSVSG*EVPRAF Trigger: AAAGGCTCTGGGCACCTCTCAACCACTGACTGACAG...TCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGCTGTCAGTCAGTGGTTaGGAGGTGCCCAGAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: GTMSTPSASIECIGSPLQLSVSG*EVPRAF Trigger: AAAGGCTCTGGGCACCTCTCAACCACTGACTGACAG...CTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | TTCCTCCATCCTGATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCTCTTCCTGCTGTCCCTaGAGCTCCTGTCCGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: FLHPDSSSHHPLAGELPGSSCCP*SSCPCV Trigger: GACACACGGACAGGAGCTTCAGGGACAGCAGGAAGA...GCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATCAGGATGGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTGGGCCCACTCTCTCCTaGAGCCTCTTCCTCCTCACT | + |
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Preference number: 4 (lower is better) Translates to: VSQGTMSTPSASIECIGSGPTLS*SLFLLT Trigger: AGTGAGGAGGAAGAGGCTGCAGGAGAGAGTGGGCCC...AGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | CAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCGGGCCCACTCTCTCCTaGAGCCTCTTCCTCCTCACT | + |
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Preference number: 4 (lower is better) Translates to: QVSQGTMSTPSASIECIGGPTLS*SLFLLT Trigger: AGTGAGGAGGAAGAGGCTGCAGGAGAGAGTGGGCCC...GCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCCAGAGCTGCTTGCAGAGTGTGCAGAAACCCTGCCCTAAACCAGGCTATACGTCCCTCGCTTCTTaGTGCTTCTCCTGGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GLQSCLQSVQKPCPKPGYTSLAS*CFSWGL Trigger: AAGACCCCAGGAGAAGCAGCAAGAAGCGAGGGACGT...ATAGCCTGGTTTAGGGCAGGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | GTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTAGAAAGGCCTGCTCTTaGGCCTCCAGGCGAGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: VSQGTMSTPSASIECIGSRKACS*ASRRAS Trigger: GCTTGCTCGCCTGGAGGCCCAAGAGCAGGCCTTTCT...AGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | CAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCTCACTGTCAGTCAGTaGTTGAGAGGTGCCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: QGTMSTPSASIECIGSPLLTVSQ*LRGAQS Trigger: GCTCTGGGCACCTCTCAACCACTGACTGACAGTGAG...CAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | TCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTTGGCGGCAGTCTTGTTaGAGAGATCACTCCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: STPSASIECIGSPLQTGAWRQSC*RDHSTS Trigger: ACTGGTGGAGTGATCTCTTCAACAAGACTGCCGCCA...AGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | CAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGTGGCGGCAGTCTTGTTaGAGAGATCACTCCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: QGTMSTPSASIECIGSPLWRQSC*RDHSTS Trigger: ACTGGTGGAGTGATCTCTTCAACAAGACTGCCGCCA...CAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCATTTGAGCCTTTGAGCTaGGCCAGAAAGGCCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GDHVHPLSQYRMHWLSSAFEPLS*ARKACS Trigger: AGAGCAGGCCTTTCTGGCTCAGCTCAAAGGCTCAAA...TGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTGAGCCTTTGAGCCTTTaGGCTGAGCCAGAAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ASIECIGSPLQTGAPELLEPLSL*AEPERP Trigger: AGGCCTTTCTGGCTCAGCTCAAAGGCTCAAAGGCTC...AAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GGACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCGAGCCTTTGAGCCTTTaGGCTGAGCCAGAAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GQQVSQGTMSTPSASIECEPLSL*AEPERP Trigger: AGGCCTTTCTGGCTCAGCTCAAAGGCTCAAAGGCTC...GCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | TTCCTCCATCCTGATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCCTGTCAGTCAGTGGTTaGGAGGTGCCCAGAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: FLHPDSSSHHPLAGELPGLSVSG*EVPRAF Trigger: AAAGGCTCTGGGCACCTCTCAACCACTGACTGACAG...GCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATCAGGATGGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTTCTTCCTGCTGTCCCTaGAGCTCCTGTCCGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VSQGTMSTPSASIECIGSSSCCP*SSCPCV Trigger: GACACACGGACAGGAGCTTCAGGGACAGCAGGAAGA...AGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCCAGAGCTGCTTGCAGAGTGTGCAGAAACCCTGCCCTAAACCAGGCTATGATCAGATTGCTCTGTaGTCAGTTCTCTGGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GLQSCLQSVQKPCPKPGYDQIAL*SVLWAH Trigger: GTGGGCCCAGAGAACTGAGCACAGAGCAATCTGATC...ATAGCCTGGTTTAGGGCAGGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | AGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTGCAGGTGACTGCGCTGGGTaGTCTCCTTGGAAAGACGTC | + |
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Preference number: 4 (lower is better) Translates to: SIECIGSPLQTGAPELLAGDCAG*SPWKDV Trigger: GACGTCTTTCCAAGGAGACCACCCAGCGCAGTCACC...TGCAAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | ACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATAGAAAGGCCTGCTCTTaGGCCTCCAGGCGAGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: TASFTGDHVHPLSQYRMHRKACS*ASRRAS Trigger: GCTTGCTCGCCTGGAGGCCCAAGAGCAGGCCTTTCT...ATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | GGGCTCCAGAGCTGCTTGCAGAGTGTGCAGAAACCCTGCCCTAAACCAGGCTATTCCCCGTCTTCTTCATaGCGCTGCTTCCTCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: GLQSCLQSVQKPCPKPGYSPSSS*RCFLLF Trigger: GAAAAGGAGGAAGCAGCGCCATGAAGAAGACGGGGA...ATAGCCTGGTTTAGGGCAGGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | ACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCATCCCCGTCTTCTTCATaGCGCTGCTTCCTCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: TPSASIECIGSPLQTGAPSPSSS*RCFLLF Trigger: GAAAAGGAGGAAGCAGCGCCATGAAGAAGACGGGGA...TGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | GGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCATCTTGCTGCTTCTCCTaGGGTCTTTGTCTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GDHVHPLSQYRMHWLSSASCCFS*GLCLLH Trigger: GTGGAGGAGACAAAGACCCCAGGAGAAGCAGCAAGA...TGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCACCAGGTTTATAGCTTGGCCTTCATGGTaGTACCAATCCGGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSSSHHPLAGELPGTRFIAWPSW*YQSGQP Trigger: AGGCTGCCCGGATTGGTATCACCATGAAGGCCAAGC...TATAAACCTGGTGCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCACCAGGTTTATATCTTCCTGCTGTCCCTaGAGCTCCTGTCCGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DSSSHHPLAGELPGTRFISSCCP*SSCPCV Trigger: GACACACGGACAGGAGCTTCAGGGACAGCAGGAAGA...TATAAACCTGGTGCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTTCAGTGGTTGAGAGGTaGCCAGAGCCTTTGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASIECIGSPLQTGAPELLSVVER*PEPLSL Trigger: AAGGCTCAAAGGCTCTGGGCACCTCTCAACCACTGA...AAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | TTCCTCCATCCTGATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCGATCAGATTGCTCTGTaGTCAGTTCTCTGGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: FLHPDSSSHHPLAGELPGDQIAL*SVLWAH Trigger: GTGGGCCCAGAGAACTGAGCACAGAGCAATCTGATC...GCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATCAGGATGGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | AGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTGCAACGTCCCTCGCTTCTTaGTGCTTCTCCTGGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIECIGSPLQTGAPELLATSLAS*CFSWGL Trigger: AAGACCCCAGGAGAAGCAGCAAGAAGCGAGGGACGT...TGCAAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTACGTCCCTCGCTTCTTaGTGCTTCTCCTGGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSQGTMSTPSASIECIGSTSLAS*CFSWGL Trigger: AAGACCCCAGGAGAAGCAGCAAGAAGCGAGGGACGT...AGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | CAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCCTCACCTGCATCCTCTaGTACCCATGTCCCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: QVSQGTMSTPSASIECIGLTCIL*YPCPTI Trigger: GATGGTGGGACATGGGTAGCAGAGGATGCAGGTGAG...GCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCTCACCTGCATCCTCTaGTACCCATGTCCCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSQGTMSTPSASIECIGSLTCIL*YPCPTI Trigger: GATGGTGGGACATGGGTAGCAGAGGATGCAGGTGAG...AGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | GGGCTCCAGAGCTGCTTGCAGAGTGTGCAGAAACCCTGCCCTAAACCAGGCTATGCTGGGTGGTCTCCTTaGAAAGACGTCTTATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLQSCLQSVQKPCPKPGYAGWSP*KDVLSA Trigger: TGCAGATAAGACGTCTTTCCAAGGAGACCACCCAGC...ATAGCCTGGTTTAGGGCAGGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | TTTGGACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAAGGTGACTGCGCTGGGTaGTCTCCTTGGAAAGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: FGQQVSQGTMSTPSASIEGDCAG*SPWKDV Trigger: GACGTCTTTCCAAGGAGACCACCCAGCGCAGTCACC...TTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGTCCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | TCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGTCTGATACAGCAAGCTaGGTTTGGGGTGACTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SASIECIGSPLQTGAPELSDTAS*VWGDCA Trigger: AGCGCAGTCACCCCAAACCCAGCTTGCTGTATCAGA...CAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | CTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTTCTGATACAGCAAGCTaGGTTTGGGGTGACTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSQYRMHWLSSADWGSRASDTAS*VWGDCA Trigger: AGCGCAGTCACCCCAAACCCAGCTTGCTGTATCAGA...AGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | GATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCACCAGGTTTATACTGTGCTCAGTTCTCTaGGCCCACTCTCTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSSSHHPLAGELPGTRFILCSVL*AHSLLQ Trigger: CTGCAGGAGAGAGTGGGCCCAGAGAACTGAGCACAG...TATAAACCTGGTGCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | TTCCTCCATCCTGATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCTCTTGCTGCTTCTCCTaGGGTCTTTGTCTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLHPDSSSHHPLAGELPGSCCFS*GLCLLH Trigger: GTGGAGGAGACAAAGACCCCAGGAGAAGCAGCAAGA...GCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATCAGGATGGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | GCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTTCTTGCTGCTTCTCCTaGGGTCTTTGTCTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASIECIGSPLQTGAPELLSCCFS*GLCLLH Trigger: GTGGAGGAGACAAAGACCCCAGGAGAAGCAGCAAGA...AAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | CAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGTTTTTCCTGGAAGGCTaGTCAGATTGCTCTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGTMSTPSASIECIGSPLFFLEG*SDCSVL Trigger: GAGCACAGAGCAATCTGATCAGCCTTCCAGGAAAAA...CAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | CAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGACCCCATGGTTATCTTaGTTCAGTGTCACCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGTMSTPSASIECIGSPLTPWLS*FSVTLR Trigger: CCTCAAGGTGACACTGAAGCAAGATAACCATGGGGT...CAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | ACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCATGTCTCTCGGCTTTCTaGCTCTTCTTCTTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPSASIECIGSPLQTGAPCLSAF*LFFFFL Trigger: CAGGAAGAAGAAGAAGAGGCAGAAAGCCGAGAGACA...TGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCATGTCTCTCGGCTTTCTaGCTCTTCTTCTTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDHVHPLSQYRMHWLSSACLSAF*LFFFFL Trigger: CAGGAAGAAGAAGAAGAGGCAGAAAGCCGAGAGACA...TGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCACCAGGTTTATACTCACCTGCATCCTCTaGTACCCATGTCCCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: DSSSHHPLAGELPGTRFILTCIL*YPCPTI Trigger: GATGGTGGGACATGGGTAGCAGAGGATGCAGGTGAG...TATAAACCTGGTGCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | CTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTGGGTGGTCTCCTTaGAAAGACGTCTTATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSQYRMHWLSSADWGSRAAGWSP*KDVLSA Trigger: TGCAGATAAGACGTCTTTCCAAGGAGACCACCCAGC...AGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | TTTGGACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAACTCACTGTCAGTCAGTaGTTGAGAGGTGCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FGQQVSQGTMSTPSASIELTVSQ*LRGAQS Trigger: GCTCTGGGCACCTCTCAACCACTGACTGACAGTGAG...TTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGTCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | ACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCGGCAGTCTTGTTaGAGAGATCACTCCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TASFTGDHVHPLSQYRMHWRQSC*RDHSTS Trigger: ACTGGTGGAGTGATCTCTTCAACAAGACTGCCGCCA...ATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGTCTTCACAAACTTCTaGTACAGCAAGCTGGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GDHVHPLSQYRMHWLSSAVFTNF*YSKLGL Trigger: CAAACCCAGCTTGCTGTATCAGAAGTTTGTGAAGAC...TGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTTTTTTCCTGGAAGGCTaGTCAGATTGCTCTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASIECIGSPLQTGAPELLFFLEG*SDCSVL Trigger: GAGCACAGAGCAATCTGATCAGCCTTCCAGGAAAAA...AAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGC 52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | TCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGGGTTGTCAACATCACTaGAGTTCCCCAAGTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SASIECIGSPLQTGAPELGCQHH*SSPSLC Trigger: ACAGAGACTTGGGGAACTGCAGTGATGTTGACAACC...CAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCACCAGGTTTATATCAGTGGTTGAGAGGTaGCCAGAGCCTTTGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DSSSHHPLAGELPGTRFISVVER*PEPLSL Trigger: AAGGCTCAAAGGCTCTGGGCACCTCTCAACCACTGA...TATAAACCTGGTGCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | ACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTCAGTGGTTGAGAGGTaGCCAGAGCCTTTGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TASFTGDHVHPLSQYRMHSVVER*PEPLSL Trigger: AAGGCTCAAAGGCTCTGGGCACCTCTCAACCACTGA...ATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCCAGAGCTGCTTGCAGAGTGTGCAGAAACCCTGCCCTAAACCAGGCTATACTCTTTTCAGTTGTTaGAGCCTCTTCCCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLQSCLQSVQKPCPKPGYTLFSC*SLFPLF Trigger: AAAGAGGGGGAAGAGGCTGCAACAACTGAAAAGAGT...ATAGCCTGGTTTAGGGCAGGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | CTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTTGTCTCTCGGCTTTCTaGCTCTTCTTCTTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSQYRMHWLSSADWGSRACLSAF*LFFFFL Trigger: CAGGAAGAAGAAGAAGAGGCAGAAAGCCGAGAGACA...AGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | ACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAAGATCACTCCACCAGTaGTCTGTAAATTCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSASIECIGSPLQTGAPRSLHQ*SVNSLA Trigger: TGCCAAGGAATTTACAGACCACTGGTGGAGTGATCT...TGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | AGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTTCCCTTCTTCCTCTTaGGTATCTAAGTCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQYRMHWLSSADWGSRAAFPSSS*VSKSSP Trigger: TGGGGAGGACTTAGATACCCAAGAGGAAGAAGGGAA...AGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | GGACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCTTCCCTTCTTCCTCTTaGGTATCTAAGTCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQQVSQGTMSTPSASIECFPSSS*VSKSSP Trigger: TGGGGAGGACTTAGATACCCAAGAGGAAGAAGGGAA...GCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTGTCTTCACAAACTTCTaGTACAGCAAGCTGGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASIECIGSPLQTGAPELLVFTNF*YSKLGL Trigger: CAAACCCAGCTTGCTGTATCAGAAGTTTGTGAAGAC...AAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTACCCCATGGTTATCTTaGTTCAGTGTCACCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSQGTMSTPSASIECIGSTPWLS*FSVTLR Trigger: CCTCAAGGTGACACTGAAGCAAGATAACCATGGGGT...AGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | CAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGTCTTCTTCATGGCGCTaGTTCCTCCTTTTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGTMSTPSASIECIGSPLSSSWR*FLLFFF Trigger: AAAGAAGAAAAGGAGGAAGCAGCGCCATGAAGAAGA...CAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GGACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCTCCTCCTCACAGCACTaGTGTCTTTTCCTTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQQVSQGTMSTPSASIECSSSQH*CLFLLS Trigger: AGACAAAAGGAAAAGACAGCAGTGCTGTGAGGAGGA...GCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | TTTGGACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAACTCTCCTTTGGGTATTaGCGACTTCTCTCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FGQQVSQGTMSTPSASIELSFGY*RLLSPA Trigger: TGCAGGTGAGAGAAGTCGGCAATACCCAAAGGAGAG...TTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGTCCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | ACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATCTCTCCTTTGGGTATTaGCGACTTCTCTCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TASFTGDHVHPLSQYRMHLSFGY*RLLSPA Trigger: TGCAGGTGAGAGAAGTCGGCAATACCCAAAGGAGAG...ATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | AGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTAGATCACTCCACCAGTaGTCTGTAAATTCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQYRMHWLSSADWGSRAARSLHQ*SVNSLA Trigger: TGCCAAGGAATTTACAGACCACTGGTGGAGTGATCT...AGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | GCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTAGATCACTCCACCAGTaGTCTGTAAATTCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASIECIGSPLQTGAPELLRSLHQ*SVNSLA Trigger: TGCCAAGGAATTTACAGACCACTGGTGGAGTGATCT...AAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | GTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTTTCCCTTCTTCCTCTTaGGTATCTAAGTCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSQGTMSTPSASIECIGSFPSSS*VSKSSP Trigger: TGGGGAGGACTTAGATACCCAAGAGGAAGAAGGGAA...AGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | GTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTGTCTTCACAAACTTCTaGTACAGCAAGCTGGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: VSQGTMSTPSASIECIGSVFTNF*YSKLGL Trigger: CAAACCCAGCTTGCTGTATCAGAAGTTTGTGAAGAC...AGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | ACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTTTTTCCTGGAAGGCTaGTCAGATTGCTCTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TASFTGDHVHPLSQYRMHFFLEG*SDCSVL Trigger: GAGCACAGAGCAATCTGATCAGCCTTCCAGGAAAAA...ATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | GATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCACCAGGTTTATAGGTTGTCAACATCACTaGAGTTCCCCAAGTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: DSSSHHPLAGELPGTRFIGCQHH*SSPSLC Trigger: ACAGAGACTTGGGGAACTGCAGTGATGTTGACAACC...TATAAACCTGGTGCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | CAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCACTCTTTTCAGTTGTTaGAGCCTCTTCCCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVSQGTMSTPSASIECIGTLFSC*SLFPLF Trigger: AAAGAGGGGGAAGAGGCTGCAACAACTGAAAAGAGT...GCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | AGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTCTTCTTCATGGCGCTaGTTCCTCCTTTTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQYRMHWLSSADWGSRAASSSWR*FLLFFF Trigger: AAAGAAGAAAAGGAGGAAGCAGCGCCATGAAGAAGA...AGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | CAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCCTCCTCACAGCACTaGTGTCTTTTCCTTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVSQGTMSTPSASIECIGSSSQH*CLFLLS Trigger: AGACAAAAGGAAAAGACAGCAGTGCTGTGAGGAGGA...GCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | AGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTGCATCTTCTTCATGGCGCTaGTTCCTCCTTTTCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SIECIGSPLQTGAPELLASSSWR*FLLFFF Trigger: AAAGAAGAAAAGGAGGAAGCAGCGCCATGAAGAAGA...TGCAAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | ACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTCCTCCTCACAGCACTaGTGTCTTTTCCTTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TASFTGDHVHPLSQYRMHSSSQH*CLFLLS Trigger: AGACAAAAGGAAAAGACAGCAGTGCTGTGAGGAGGA...ATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | GGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGTTTTCTTCTTTTTCCTaGAAGGCTGATCAGATTGCT | + |
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Preference number: 4 (lower is better) Translates to: GTMSTPSASIECIGSPLQFSSFS*KADQIA Trigger: AGCAATCTGATCAGCCTTCCAGGAAAAAGAAGAAAA...CTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | CAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGTTTTCTTCTTTTTCCTaGAAGGCTGATCAGATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGTMSTPSASIECIGSPLFSSFS*KADQIA Trigger: AGCAATCTGATCAGCCTTCCAGGAAAAAGAAGAAAA...CAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | AGACTTTTAAAAGAGACACTCCAAATATTCCTCCATCCTGATTCCTCTTCCCACGCTTGGCCTTCATGGTaGTACCAATCCGGGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RLLKETLQIFLHPDSSSHAWPSW*YQSGQP Trigger: AGGCTGCCCGGATTGGTATCACCATGAAGGCCAAGC...GTGGGAAGAGGAATCAGGATGGAGGAATATTTGGAGTGTCTCTTTTAAAAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | AGACTTTTAAAAGAGACACTCCAAATATTCCTCCATCCTGATTCCTCTTCCCACCTGTGCTCAGTTCTCTaGGCCCACTCTCTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RLLKETLQIFLHPDSSSHLCSVL*AHSLLQ Trigger: CTGCAGGAGAGAGTGGGCCCAGAGAACTGAGCACAG...GTGGGAAGAGGAATCAGGATGGAGGAATATTTGGAGTGTCTCTTTTAAAAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | AGACTTTTAAAAGAGACACTCCAAATATTCCTCCATCCTGATTCCTCTTCCCACGATCAGATTGCTCTGTaGTCAGTTCTCTGGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLLKETLQIFLHPDSSSHDQIAL*SVLWAH Trigger: GTGGGCCCAGAGAACTGAGCACAGAGCAATCTGATC...GTGGGAAGAGGAATCAGGATGGAGGAATATTTGGAGTGTCTCTTTTAAAAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | ACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTTTTCTTCTTTTTCCTaGAAGGCTGATCAGATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TASFTGDHVHPLSQYRMHFSSFS*KADQIA Trigger: AGCAATCTGATCAGCCTTCCAGGAAAAAGAAGAAAA...ATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CCA 90 bp | AGACTTTTAAAAGAGACACTCCAAATATTCCTCCATCCTGATTCCTCTTCCCACTCCCCGTCTTCTTCATaGCGCTGCTTCCTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLLKETLQIFLHPDSSSHSPSSS*RCFLLF Trigger: GAAAAGGAGGAAGCAGCGCCATGAAGAAGACGGGGA...GTGGGAAGAGGAATCAGGATGGAGGAATATTTGGAGTGTCTCTTTTAAAAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR TCA 90 bp | TTCAGACTTTTAAAAGAGACACTCCAAATATTCCTCCATCCTGATTCCTCTTCCTTTGAGCCTTTGAGCTaGGCCAGAAAGGCCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FRLLKETLQIFLHPDSSSFEPLS*ARKACS Trigger: AGAGCAGGCCTTTCTGGCTCAGCTCAAAGGCTCAAA...GGAAGAGGAATCAGGATGGAGGAATATTTGGAGTGTCTCTTTTAAAAGTCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | TTCAGACTTTTAAAAGAGACACTCCAAATATTCCTCCATCCTGATTCCTCTTCCCTCTCCTTTGGGTATTaGCGACTTCTCTCACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FRLLKETLQIFLHPDSSSLSFGY*RLLSPA Trigger: TGCAGGTGAGAGAAGTCGGCAATACCCAAAGGAGAG...GGAAGAGGAATCAGGATGGAGGAATATTTGGAGTGTCTCTTTTAAAAGTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR GCA 90 bp | AGACTTTTAAAAGAGACACTCCAAATATTCCTCCATCCTGATTCCTCTTCCCACACTCTTTTCAGTTGTTaGAGCCTCTTCCCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLLKETLQIFLHPDSSSHTLFSC*SLFPLF Trigger: AAAGAGGGGGAAGAGGCTGCAACAACTGAAAAGAGT...GTGGGAAGAGGAATCAGGATGGAGGAATATTTGGAGTGTCTCTTTTAAAAGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS TCA 90 bp | AGGCCTGCTCTTGGGCCTCCAGGCGAGCAAGCTTGGCCTTCATGGTaGTACCAATCCGGGCAGCCTTGTGTGCTGTTCGCCCCTCGCAAG | + |
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Preference number: 5 (lower is better) Translates to: RPALGPPGEQAWPSW*YQSGQPCVLFAPRK Trigger: CTTGCGAGGGGCGAACAGCACACAAGGCTGCCCGGATTGGTATCACCATGAAGGCCAAGCTTGCTCGCCTGGAGGCCCAAGAGCAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS-3UTR CAA 90 bp | GGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGCCAATCCGGGCAGCCTaGTGTGCTGTTCGCCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: GTMSTPSASIECIGSPLQPIRAA*CAVRPS Trigger: CGAGGGGCGAACAGCACACAAGGCTGCCCGGATTGG...CTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGACCAATCCGGGCAGCCTaGTGTGCTGTTCGCCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: PLSQYRMHWLSSADWGSRPIRAA*CAVRPS Trigger: CGAGGGGCGAACAGCACACAAGGCTGCCCGGATTGG...TCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS TCA 90 bp | CACTGTCAGTCAGTGGTTGAGAGGTGCCCAGAGCCTTTGAGCCTTTaGGCTGAGCCAGAAAGGCCTGCTCTTGGGCCTCCAGGCGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: HCQSVVERCPEPLSL*AEPERPALGPPGEQ Trigger: TTGCTCGCCTGGAGGCCCAAGAGCAGGCCTTTCTGGCTCAGCTCAAAGGCTCAAAGGCTCTGGGCACCTCTCAACCACTGACTGACAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS TCA 90 bp | GGAAGGCTCACTGTCAGTCAGTGGTTGAGAGGTGCCCAGAGCCTTTaGGCCTTTGAGCTGAGCCAGAAAGGCCTGCTCTTGGGCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GRLTVSQWLRGAQSL*AFELSQKGLLLGLQ Trigger: CTGGAGGCCCAAGAGCAGGCCTTTCTGGCTCAGCTCAAAGGCTCAAAGGCTCTGGGCACCTCTCAACCACTGACTGACAGTGAGCCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS-3UTR CAA 90 bp | GCAGACTGGGGCTCCAGAGCTGCTTGCAGAGTGTGCAGAAACCCTGCCCTAAACCGCCCCTCGCAAGCCTaGAGTAGCATCTCATCAGTC | + |
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Preference number: 5 (lower is better) Translates to: ADWGSRAACRVCRNPALNRPSQA*SSISSV Trigger: GACTGATGAGATGCTACTCAAGGCTTGCGAGGGGCG...GTTTAGGGCAGGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCCCAGTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | CAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTGCCACGTCCCTCGCTTCTaGCTGCTTCTCCTGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QYRMHWLSSADWGSRAACHVPRF*LLLLGS Trigger: AGACCCCAGGAGAAGCAGCAAGAAGCGAGGGACGTG...GCAAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | TTCCTCCATCCTGATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCCACGTCCCTCGCTTCTaGCTGCTTCTCCTGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLHPDSSSHHPLAGELPGHVPRF*LLLLGS Trigger: AGACCCCAGGAGAAGCAGCAAGAAGCGAGGGACGTG...GCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATCAGGATGGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS TCA 90 bp | TACCAATCCGGGCAGCCTTGTGTGCTGTTCGCCCCTCGCAAGCCTTaGGTAGCATCTCATCAGTCAGAATCTTTGGGGGCGTGGGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: YQSGQPCVLFAPRKP*VASHQSESLGAWAH Trigger: ATGAGCCCACGCCCCCAAAGATTCTGACTGATGAGATGCTACTCAAGGCTTGCGAGGGGCGAACAGCACACAAGGCTGCCCGGATTGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS-3UTR CAA 90 bp | CAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTGCTTCATCCCACGGCTCTaGACCTCTGGGGTGACACTC | + |
|
Preference number: 5 (lower is better) Translates to: QYRMHWLSSADWGSRAACFIPRL*TSGVTL Trigger: GAGTGTCACCCCAGAGGTCAAGAGCCGTGGGATGAA...GCAAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | TCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGTTCATCCCACGGCTCTaGACCTCTGGGGTGACACTC | + |
|
Preference number: 5 (lower is better) Translates to: SASIECIGSPLQTGAPELFIPRL*TSGVTL Trigger: GAGTGTCACCCCAGAGGTCAAGAGCCGTGGGATGAA...CAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | GCAGACTGGGGCTCCAGAGCTGCTTGCAGAGTGTGCAGAAACCCTGCCCTAAACAAGCTGGCGGCAGTCTaGTTGAAGAGATCACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ADWGSRAACRVCRNPALNKLAAV*LKRSLH Trigger: GTGGAGTGATCTCTTCAACAAGACTGCCGCCAGCTT...GTTTAGGGCAGGGTTTCTGCACACTCTGCAAGCAGCTCTGGAGCCCCAGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | GCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTCGCCCCTCGCAAGCCTaGAGTAGCATCTCATCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASIECIGSPLQTGAPELLRPSQA*SSISSV Trigger: GACTGATGAGATGCTACTCAAGGCTTGCGAGGGGCG...AAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | AGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTGCACACGTCCCTCGCTTCTaGCTGCTTCTCCTGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIECIGSPLQTGAPELLAHVPRF*LLLLGS Trigger: AGACCCCAGGAGAAGCAGCAAGAAGCGAGGGACGTG...TGCAAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CCA 90 bp | GATACAGCAAGCTGGGTTTGGGGTGACTGCGCTGGGTGGTCTCCTTaGAAAGACGTCTTATCTGCACTCCATCCTTCCCCGAGTCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: DTASWVWGDCAGWSP*KDVLSALHPSPSPL Trigger: TAGTGGACTCGGGGAAGGATGGAGTGCAGATAAGACGTCTTTCCAAGGAGACCACCCAGCGCAGTCACCCCAAACCCAGCTTGCTGTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS-3UTR CAA 90 bp | AGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTGCATTCATCCCACGGCTCTaGACCTCTGGGGTGACACTC | + |
|
Preference number: 5 (lower is better) Translates to: SIECIGSPLQTGAPELLAFIPRL*TSGVTL Trigger: GAGTGTCACCCCAGAGGTCAAGAGCCGTGGGATGAA...TGCAAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | CAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGTGGTCTGTAAATTCCTaGGCAGGGTCATGTCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: QGTMSTPSASIECIGSPLWSVNS*AGSCPT Trigger: GGTGGGACATGACCCTGCCAAGGAATTTACAGACCA...CAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | TCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTAAGCTGGCGGCAGTCTaGTTGAAGAGATCACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: STPSASIECIGSPLQTGAKLAAV*LKRSLH Trigger: GTGGAGTGATCTCTTCAACAAGACTGCCGCCAGCTT...AGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | CTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTCGCTGGGTGGTCTCCTaGGAAAGACGTCTTATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSQYRMHWLSSADWGSRARWVVS*ERRLIC Trigger: GCAGATAAGACGTCTTTCCAAGGAGACCACCCAGCG...AGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | CAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCCGCCCCTCGCAAGCCTaGAGTAGCATCTCATCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QVSQGTMSTPSASIECIGRPSQA*SSISSV Trigger: GACTGATGAGATGCTACTCAAGGCTTGCGAGGGGCG...GCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | CTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTACTGTCAGTCAGTGGTaGAGAGGTGCCCAGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSQYRMHWLSSADWGSRATVSQW*RGAQSL Trigger: AAGGCTCTGGGCACCTCTCAACCACTGACTGACAGT...AGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTACTGTCAGTCAGTGGTaGAGAGGTGCCCAGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SQYRMHWLSSADWGSRAATVSQW*RGAQSL Trigger: AAGGCTCTGGGCACCTCTCAACCACTGACTGACAGT...AGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | GGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGCTTCTCCTGGGGTCTTaGTCTCCTCCACTGTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: GTMSTPSASIECIGSPLQLLLGS*SPPLLT Trigger: AGTCAACAGTGGAGGAGACAAAGACCCCAGGAGAAG...CTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS GCA 90 bp | CAGTCAGAATCTTTGGGGGCGTGGGCTCATGGTTGTCAACATCACTaGAGTTCCCCAAGTCTCTGTCAGGCTTCTCCTCACCCGAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QSESLGAWAHGCQHH*SSPSLCQASPHPRL Trigger: TAACCTCGGGTGAGGAGAAGCCTGACAGAGACTTGGGGAACTGCAGTGATGTTGACAACCATGAGCCCACGCCCCCAAAGATTCTGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS GCA 90 bp | CGGTCCCTCTTCCGCTTCTTCTTTTTGGCTCTCTCCTTTGGGTATTaGCGACTTCTCTCACCTGCATCCTCTGCTACCCATGTCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RSLFRFFFLALSFGY*RLLSPASSATHVPP Trigger: TGGTGGGACATGGGTAGCAGAGGATGCAGGTGAGAGAAGTCGGCAATACCCAAAGGAGAGAGCCAAAAAGAAGAAGCGGAAGAGGGACCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CCA 90 bp | CAAACTTCTGATACAGCAAGCTGGGTTTGGGGTGACTGCGCTGGGTaGTCTCCTTGGAAAGACGTCTTATCTGCACTCCATCCTTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QTSDTASWVWGDCAG*SPWKDVLSALHPSP Trigger: CGGGGAAGGATGGAGTGCAGATAAGACGTCTTTCCAAGGAGACCACCCAGCGCAGTCACCCCAAACCCAGCTTGCTGTATCAGAAGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS CCA 90 bp | CCGAGGTTAGTGTGGCTGTCTTCACAAACTTCTGATACAGCAAGCTaGGTTTGGGGTGACTGCGCTGGGTGGTCTCCTTGGAAAGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRLVWLSSQTSDTAS*VWGDCAGWSPWKDV Trigger: GACGTCTTTCCAAGGAGACCACCCAGCGCAGTCACCCCAAACCCAGCTTGCTGTATCAGAAGTTTGTGAAGACAGCCACACTAACCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS CCA 90 bp | GCTGCTTCTCCTGGGGTCTTTGTCTCCTCCACTGTTGACTGCCTTTaGCCGGCTTGTCACATCTCTACCTCCTTCATCACAGACTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AASPGVFVSSTVDCL*PACHISTSFITDSH Trigger: ATGGGAGTCTGTGATGAAGGAGGTAGAGATGTGACAAGCCGGCCAAAGGCAGTCAACAGTGGAGGAGACAAAGACCCCAGGAGAAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | GGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCACACCCCATGGTTATCTaGCTTCAGTGTCACCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GDHVHPLSQYRMHWLSSAHPMVI*LQCHLE Trigger: CTCAAGGTGACACTGAAGCAAGATAACCATGGGGTG...TGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | TTCCTCCATCCTGATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCTGGTCTGTAAATTCCTaGGCAGGGTCATGTCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: FLHPDSSSHHPLAGELPGWSVNS*AGSCPT Trigger: GGTGGGACATGACCCTGCCAAGGAATTTACAGACCA...GCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATCAGGATGGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | GGACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCAAGCTGGCGGCAGTCTaGTTGAAGAGATCACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GQQVSQGTMSTPSASIECKLAAV*LKRSLH Trigger: GTGGAGTGATCTCTTCAACAAGACTGCCGCCAGCTT...GCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | AGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTGCACGCTGGGTGGTCTCCTaGGAAAGACGTCTTATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SIECIGSPLQTGAPELLARWVVS*ERRLIC Trigger: GCAGATAAGACGTCTTTCCAAGGAGACCACCCAGCG...TGCAAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | CAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCCAGGCGAGCAAGCTaGGCCTTCATGGTGATACCA | + |
|
Preference number: 5 (lower is better) Translates to: QVSQGTMSTPSASIECIGSRRAS*AFMVIP Trigger: TGGTATCACCATGAAGGCCAAGCTTGCTCGCCTGGA...GCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | AGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTGCATCCAGGCGAGCAAGCTaGGCCTTCATGGTGATACCA | + |
|
Preference number: 5 (lower is better) Translates to: SIECIGSPLQTGAPELLASRRAS*AFMVIP Trigger: TGGTATCACCATGAAGGCCAAGCTTGCTCGCCTGGA...TGCAAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | GTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTACTGTCAGTCAGTGGTaGAGAGGTGCCCAGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSQGTMSTPSASIECIGSTVSQW*RGAQSL Trigger: AAGGCTCTGGGCACCTCTCAACCACTGACTGACAGT...AGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGGAAGGCTGATCAGATaGCTCTGTGCTCAGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLSQYRMHWLSSADWGSRGRLIR*LCAQFS Trigger: AGAGAACTGAGCACAGAGCAATCTGATCAGCCTTCC...TCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | CAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTGCCTTCTCCTGGGGTCTTaGTCTCCTCCACTGTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: QYRMHWLSSADWGSRAACLLLGS*SPPLLT Trigger: AGTCAACAGTGGAGGAGACAAAGACCCCAGGAGAAG...GCAAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | TTCCTCCATCCTGATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCTCTCTCCTTTGGGTATaGCCGACTTCTCTCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLHPDSSSHHPLAGELPGSLLWV*PTSLTC Trigger: GCAGGTGAGAGAAGTCGGCAATACCCAAAGGAGAGA...GCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATCAGGATGGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CCA 90 bp | AGACCCTCGGTCCCTCTTCCGCTTCTTCTTTTTGGCTCTCTCCTTTaGGTATTGCCGACTTCTCTCACCTGCATCCTCTGCTACCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: RPSVPLPLLLFGSLL*VLPTSLTCILCYPC Trigger: ACATGGGTAGCAGAGGATGCAGGTGAGAGAAGTCGGCAATACCCAAAGGAGAGAGCCAAAAAGAAGAAGCGGAAGAGGGACCGAGGGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | TTCCTCCATCCTGATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCCACCCCATGGTTATCTaGCTTCAGTGTCACCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLHPDSSSHHPLAGELPGHPMVI*LQCHLE Trigger: CTCAAGGTGACACTGAAGCAAGATAACCATGGGGTG...GCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATCAGGATGGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | TTTGGACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAACGCTGGGTGGTCTCCTaGGAAAGACGTCTTATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FGQQVSQGTMSTPSASIERWVVS*ERRLIC Trigger: GCAGATAAGACGTCTTTCCAAGGAGACCACCCAGCG...TTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGTCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | ACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTCCAGGCGAGCAAGCTaGGCCTTCATGGTGATACCA | + |
|
Preference number: 5 (lower is better) Translates to: TASFTGDHVHPLSQYRMHSRRAS*AFMVIP Trigger: TGGTATCACCATGAAGGCCAAGCTTGCTCGCCTGGA...ATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | TCAGCCAGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGGGAAGGCTGATCAGATaGCTCTGTGCTCAGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SASIECIGSPLQTGAPELGRLIR*LCAQFS Trigger: AGAGAACTGAGCACAGAGCAATCTGATCAGCCTTCC...CAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACTGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | GTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTTCTCTCCTTTGGGTATaGCCGACTTCTCTCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSQGTMSTPSASIECIGSSLLWV*PTSLTC Trigger: GCAGGTGAGAGAAGTCGGCAATACCCAAAGGAGAGA...AGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CCA 90 bp | AGTTCCCCAAGTCTCTGTCAGGCTTCTCCTCACCCGAGGTTAGTGTaGCTGTCTTCACAAACTTCTGATACAGCAAGCTGGGTTTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSPSLCQASPHPRLV*LSSQTSDTASWVWG Trigger: ACCCCAAACCCAGCTTGCTGTATCAGAAGTTTGTGAAGACAGCCACACTAACCTCGGGTGAGGAGAAGCCTGACAGAGACTTGGGGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS-3UTR CAA 90 bp | TTTGGACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGGTCTGTAAATTCCTaGGCAGGGTCATGTCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: FGQQVSQGTMSTPSASIEWSVNS*AGSCPT Trigger: GGTGGGACATGACCCTGCCAAGGAATTTACAGACCA...TTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGTCCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | GTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTGGCTCTGGAAGGCTGATCAGATaGCTCTGTGCTCAGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSQGTMSTPSASIECIGSGRLIR*LCAQFS Trigger: AGAGAACTGAGCACAGAGCAATCTGATCAGCCTTCC...AGAGCCAATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | GATTCCTCTTCCCACCATCCTTTAGCTGGTGAGCTGCCAGGCACCAGGTTTATACTTCTCCTGGGGTCTTaGTCTCCTCCACTGTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: DSSSHHPLAGELPGTRFILLLGS*SPPLLT Trigger: AGTCAACAGTGGAGGAGACAAAGACCCCAGGAGAAG...TATAAACCTGGTGCCTGGCAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | ACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTCTCTCCTTTGGGTATaGCCGACTTCTCTCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TASFTGDHVHPLSQYRMHSLLWV*PTSLTC Trigger: GCAGGTGAGAGAAGTCGGCAATACCCAAAGGAGAGA...ATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS GCA 90 bp | CTGTCTTCACAAACTTCTGATACAGCAAGCTGGGTTTGGGGTGACTaGGCTGGGTGGTCTCCTTGGAAAGACGTCTTATCTGCACTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSSQTSDTASWVWGD*AGWSPWKDVLSALH Trigger: ATGGAGTGCAGATAAGACGTCTTTCCAAGGAGACCACCCAGCGCAGTCACCCCAAACCCAGCTTGCTGTATCAGAAGTTTGTGAAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS-3UTR CAA 90 bp | AGACTTTTAAAAGAGACACTCCAAATATTCCTCCATCCTGATTCCTCTTCCCACCCAATCCGGGCAGCCTaGTGTGCTGTTCGCCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLLKETLQIFLHPDSSSHPIRAA*CAVRPS Trigger: CGAGGGGCGAACAGCACACAAGGCTGCCCGGATTGG...GTGGGAAGAGGAATCAGGATGGAGGAATATTTGGAGTGTCTCTTTTAAAAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | GGACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCCCTTTCTCTCTCCTTTaGTTAGGTCATCCTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GQQVSQGTMSTPSASIECPFSLL*LGHPSL Trigger: AAGGGAAGGATGACCTAACAAAAGGAGAGAGAAAGG...GCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CCA 90 bp | TTAGTGTGGCTGTCTTCACAAACTTCTGATACAGCAAGCTGGGTTTaGGGTGACTGCGCTGGGTGGTCTCCTTGGAAAGACGTCTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: LVWLSSQTSDTASWV*GDCAGWSPWKDVLS Trigger: AGATAAGACGTCTTTCCAAGGAGACCACCCAGCGCAGTCACCCCAAACCCAGCTTGCTGTATCAGAAGTTTGTGAAGACAGCCACACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS-3UTR CAA 90 bp | AGTATAGAATGCATTGGCTCTCCTCTGCAGACTGGGGCTCCAGAGCTGCTTGCATTCCGCTTCTTCTTTTaGGCTCTCTCCTTTGGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SIECIGSPLQTGAPELLAFRFFF*ALSFGY Trigger: ATACCCAAAGGAGAGAGCCAAAAAGAAGAAGCGGAA...TGCAAGCAGCTCTGGAGCCCCAGTCTGCAGAGGAGAGCCAATGCATTCTATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | ACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATCCTTTCTCTCTCCTTTaGTTAGGTCATCCTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TASFTGDHVHPLSQYRMHPFSLL*LGHPSL Trigger: AAGGGAAGGATGACCTAACAAAAGGAGAGAGAAAGG...ATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | TTTGGACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATTCCGCTTCTTCTTTTaGGCTCTCTCCTTTGGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FGQQVSQGTMSTPSASIEFRFFF*ALSFGY Trigger: ATACCCAAAGGAGAGAGCCAAAAAGAAGAAGCGGAA...TTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGTCCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | ACAGCAAGTTTCACAGGGGACCATGTCCACCCCCTCAGCCAGTATAGAATGCATTTCCGCTTCTTCTTTTaGGCTCTCTCCTTTGGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TASFTGDHVHPLSQYRMHFRFFF*ALSFGY Trigger: ATACCCAAAGGAGAGAGCCAAAAAGAAGAAGCGGAA...ATGCATTCTATACTGGCTGAGGGGGTGGACATGGTCCCCTGTGAAACTTGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS GCA 90 bp | TCTCACCTGCATCCTCTGCTACCCATGTCCCACCATCATCTTTACTaGTTACATCTAAGTCCTCCTCACAGCACTGCTGTCTTTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SHLHPLLPMSHHHLY*LHLSPPHSTAVFSF Trigger: AAAGGAAAAGACAGCAGTGCTGTGAGGAGGACTTAGATGTAAGCAGTAAAGATGATGGTGGGACATGGGTAGCAGAGGATGCAGGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS-3UTR CAA 90 bp | TTCAGACTTTTAAAAGAGACACTCCAAATATTCCTCCATCCTGATTCCTCTTCCCCTTTCTCTCTCCTTTaGTTAGGTCATCCTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FRLLKETLQIFLHPDSSSPFSLL*LGHPSL Trigger: AAGGGAAGGATGACCTAACAAAAGGAGAGAGAAAGG...GGAAGAGGAATCAGGATGGAGGAATATTTGGAGTGTCTCTTTTAAAAGTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS TCA 72 bp | CTTGGGCCTCCAGGCGAGCAAGCTTGGCCTTCATGGTaGTACCAATCCGGGCAGCCTTGTGTGCTGTTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGPPGEQAWPSW*YQSGQPCVLFA Trigger: GGCGAACAGCACACAAGGCTGCCCGGATTGGTATCACCATGAAGGCCAAGCTTGCTCGCCTGGAGGCCCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS CAA 72 bp | AGAAAGGCCTGCTCTTGGGCCTCCAGGCGAGCAAGCTaGGCCTTCATGGTGATACCAATCCGGGCAGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RKACSWASRRAS*AFMVIPIRAAL Trigger: CAAGGCTGCCCGGATTGGTATCACCATGAAGGCCAAGCTTGCTCGCCTGGAGGCCCAAGAGCAGGCCTTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS TCA 72 bp | TCAGTGGTTGAGAGGTGCCCAGAGCCTTTGAGCCTTTaGGCTGAGCCAGAAAGGCCTGCTCTTGGGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SVVERCPEPLSL*AEPERPALGPP Trigger: TGGAGGCCCAAGAGCAGGCCTTTCTGGCTCAGCTCAAAGGCTCAAAGGCTCTGGGCACCTCTCAACCACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS CAA 72 bp | CGGGCAGCCTTGTGTGCTGTTCGCCCCTCGCAAGCCTaGAGTAGCATCTCATCAGTCAGAATCTTTGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RAALCAVRPSQA*SSISSVRIFGG Trigger: GCCCCCAAAGATTCTGACTGATGAGATGCTACTCAAGGCTTGCGAGGGGCGAACAGCACACAAGGCTGCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS CAA 72 bp | CACGTCCCTCGCTTCTTGCTGCTTCTCCTGGGGTCTTaGTCTCCTCCACTGTTGACTGCCTTTGGCCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: HVPRFLLLLLGS*SPPLLTAFGRL Trigger: AAGCCGGCCAAAGGCAGTCAACAGTGGAGGAGACAAAGACCCCAGGAGAAGCAGCAAGAAGCGAGGGACGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CAA 90 bp | ATACCAATCCGGGCAGCCTTGTGTGCTGTTCGCCCCTCGCAAGCCTaGAGTAGCATCTCATCAGTCAGAATCTTTGGGGGCGTGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: IPIRAALCAVRPSQA*SSISSVRIFGGVGS Trigger: TGAGCCCACGCCCCCAAAGATTCTGACTGATGAGATGCTACTCAAGGCTTGCGAGGGGCGAACAGCACACAAGGCTGCCCGGATTGGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS GCA 72 bp | CTGCGCTGGGTGGTCTCCTTGGAAAGACGTCTTATCTaGACTCCATCCTTCCCCGAGTCCACTACCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRWVVSLERRLI*TPSFPESTTKL Trigger: CAGCTTGGTAGTGGACTCGGGGAAGGATGGAGTGCAGATAAGACGTCTTTCCAAGGAGACCACCCAGCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS GCA 72 bp | GGGTATCTAAGTCCTCCCCACACGTCCCTCGCTTCTTaGTGCTTCTCCTGGGGTCTTTGTCTCCTCCACTGT | + |
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Preference number: 6 (lower is better) Translates to: GYLSPPHTSLAS*CFSWGLCLLHC Trigger: ACAGTGGAGGAGACAAAGACCCCAGGAGAAGCAGCAAGAAGCGAGGGACGTGTGGGGAGGACTTAGATACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CCA 72 bp | TGGAAGGCTGATCAGATTGCTCTGTGCTCAGTTCTCTaGGCCCACTCTCTCCTGCAGCCTCTTCCTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: WKADQIALCSVL*AHSLLQPLPPH Trigger: GTGAGGAGGAAGAGGCTGCAGGAGAGAGTGGGCCCAGAGAACTGAGCACAGAGCAATCTGATCAGCCTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CAA 72 bp | TGGGTATCTAAGTCCTCCCCACACGTCCCTCGCTTCTaGCTGCTTCTCCTGGGGTCTTTGTCTCCTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: WVSKSSPHVPRF*LLLLGSLSPPL Trigger: CAGTGGAGGAGACAAAGACCCCAGGAGAAGCAGCAAGAAGCGAGGGACGTGTGGGGAGGACTTAGATACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CAA 90 bp | TCTTCCTCTTGGGTATCTAAGTCCTCCCCACACGTCCCTCGCTTCTaGCTGCTTCTCCTGGGGTCTTTGTCTCCTCCACTGTTGACTGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSWVSKSSPHVPRF*LLLLGSLSPPLLTA Trigger: GGCAGTCAACAGTGGAGGAGACAAAGACCCCAGGAGAAGCAGCAAGAAGCGAGGGACGTGTGGGGAGGACTTAGATACCCAAGAGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS TCA 72 bp | ACTGTCAGTCAGTGGTTGAGAGGTGCCCAGAGCCTTTaGGCCTTTGAGCTGAGCCAGAAAGGCCTGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: TVSQWLRGAQSL*AFELSQKGLLL Trigger: CAAGAGCAGGCCTTTCTGGCTCAGCTCAAAGGCTCAAAGGCTCTGGGCACCTCTCAACCACTGACTGACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS TCA 72 bp | TGCTGCTTCTCCTGGGGTCTTTGTCTCCTCCACTGTTaGCTGCCTTTGGCCGGCTTGTCACATCTCTACCTC | + |
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Preference number: 6 (lower is better) Translates to: CCFSWGLCLLHC*LPLAGLSHLYL Trigger: GAGGTAGAGATGTGACAAGCCGGCCAAAGGCAGTCAACAGTGGAGGAGACAAAGACCCCAGGAGAAGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS GCA 72 bp | TCCTTGGCAGGGTCATGTCCCACCCCATGGTTATCTTaGTTCAGTGTCACCTTGAGGGCCTGGGTAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: SLAGSCPTPWLS*FSVTLRAWVMP Trigger: TGGCATTACCCAGGCCCTCAAGGTGACACTGAAGCAAGATAACCATGGGGTGGGACATGACCCTGCCAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS GCA 72 bp | TCTTTGGGGGCGTGGGCTCATGGTTGTCAACATCACTaGAGTTCCCCAAGTCTCTGTCAGGCTTCTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: SLGAWAHGCQHH*SSPSLCQASPH Trigger: GTGAGGAGAAGCCTGACAGAGACTTGGGGAACTGCAGTGATGTTGACAACCATGAGCCCACGCCCCCAAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS GCA 72 bp | GCTTCTCCTGGGGTCTTTGTCTCCTCCACTGTTGACTaGCTTTGGCCGGCTTGTCACATCTCTACCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: ASPGVFVSSTVD*LWPACHISTSF Trigger: GAAGGAGGTAGAGATGTGACAAGCCGGCCAAAGGCAGTCAACAGTGGAGGAGACAAAGACCCCAGGAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CCA 72 bp | GTGTGGCTGTCTTCACAAACTTCTGATACAGCAAGCTaGGTTTGGGGTGACTGCGCTGGGTGGTCTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: VWLSSQTSDTAS*VWGDCAGWSPW Trigger: CCAAGGAGACCACCCAGCGCAGTCACCCCAAACCCAGCTTGCTGTATCAGAAGTTTGTGAAGACAGCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS CAA 72 bp | TTCCTTGGCAGGGTCATGTCCCACCCCATGGTTATCTaGCTTCAGTGTCACCTTGAGGGCCTGGGTAATGCC | + |
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Preference number: 6 (lower is better) Translates to: FLGRVMSHPMVI*LQCHLEGLGNA Trigger: GGCATTACCCAGGCCCTCAAGGTGACACTGAAGCAAGATAACCATGGGGTGGGACATGACCCTGCCAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS CAA 90 bp | CCTCGCTTCTTGCTGCTTCTCCTGGGGTCTTTGTCTCCTCCACTGTaGACTGCCTTTGGCCGGCTTGTCACATCTCTACCTCCTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: PRFLLLLLGSLSPPL*TAFGRLVTSLPPSS Trigger: TGATGAAGGAGGTAGAGATGTGACAAGCCGGCCAAAGGCAGTCAACAGTGGAGGAGACAAAGACCCCAGGAGAAGCAGCAAGAAGCGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CAA 90 bp | TCGGTCCCTCTTCCGCTTCTTCTTTTTGGCTCTCTCCTTTGGGTATaGCCGACTTCTCTCACCTGCATCCTCTGCTACCCATGTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: SVPLPLLLFGSLLWV*PTSLTCILCYPCPT Trigger: GGTGGGACATGGGTAGCAGAGGATGCAGGTGAGAGAAGTCGGCAATACCCAAAGGAGAGAGCCAAAAAGAAGAAGCGGAAGAGGGACCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CAA 90 bp | CAGACCCTCGGTCCCTCTTCCGCTTCTTCTTTTTGGCTCTCTCCTTaGGGTATTGCCGACTTCTCTCACCTGCATCCTCTGCTACCCATG | + |
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Preference number: 6 (lower is better) Translates to: QTLGPSSASSFWLSP*GIADFSHLHPLLPM Trigger: CATGGGTAGCAGAGGATGCAGGTGAGAGAAGTCGGCAATACCCAAAGGAGAGAGCCAAAAAGAAGAAGCGGAAGAGGGACCGAGGGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CCA 72 bp | CTGGCGGCAGTCTTGTTGAAGAGATCACTCCACCAGTaGTCTGTAAATTCCTTGGCAGGGTCATGTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: LAAVLLKRSLHQ*SVNSLAGSCPT Trigger: GGTGGGACATGACCCTGCCAAGGAATTTACAGACCACTGGTGGAGTGATCTCTTCAACAAGACTGCCGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS CCA 72 bp | CCTGGGGTCTTTGTCTCCTCCACTGTTGACTGCCTTTaGCCGGCTTGTCACATCTCTACCTCCTTCATCACA | + |
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Preference number: 6 (lower is better) Translates to: PGVFVSSTVDCL*PACHISTSFIT Trigger: TGTGATGAAGGAGGTAGAGATGTGACAAGCCGGCCAAAGGCAGTCAACAGTGGAGGAGACAAAGACCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CAA 72 bp | TTGCTGCTTCTCCTGGGGTCTTTGTCTCCTCCACTGTaGACTGCCTTTGGCCGGCTTGTCACATCTCTACCT | + |
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Preference number: 6 (lower is better) Translates to: LLLLLGSLSPPL*TAFGRLVTSLP Trigger: AGGTAGAGATGTGACAAGCCGGCCAAAGGCAGTCAACAGTGGAGGAGACAAAGACCCCAGGAGAAGCAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CAA 90 bp | TGCACTCCATCCTTCCCCGAGTCCACTACCAAGCTGGCGGCAGTCTaGTTGAAGAGATCACTCCACCAGTGGTCTGTAAATTCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: CTPSFPESTTKLAAV*LKRSLHQWSVNSLA Trigger: TGCCAAGGAATTTACAGACCACTGGTGGAGTGATCTCTTCAACAAGACTGCCGCCAGCTTGGTAGTGGACTCGGGGAAGGATGGAGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS CAA 90 bp | CTGAGATCCACTTCAGACCCTCGGTCCCTCTTCCGCTTCTTCTTTTaGGCTCTCTCCTTTGGGTATTGCCGACTTCTCTCACCTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: LRSTSDPRSLFRFFF*ALSFGYCRLLSPAS Trigger: GGATGCAGGTGAGAGAAGTCGGCAATACCCAAAGGAGAGAGCCAAAAAGAAGAAGCGGAAGAGGGACCGAGGGTCTGAAGTGGATCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CCA 72 bp | CTGTCTTCACAAACTTCTGATACAGCAAGCTGGGTTTaGGGTGACTGCGCTGGGTGGTCTCCTTGGAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: LSSQTSDTASWV*GDCAGWSPWKD Trigger: GTCTTTCCAAGGAGACCACCCAGCGCAGTCACCCCAAACCCAGCTTGCTGTATCAGAAGTTTGTGAAGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS CCA 72 bp | GTCCCTCTTCCGCTTCTTCTTTTTGGCTCTCTCCTTTaGGTATTGCCGACTTCTCTCACCTGCATCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: VPLPLLLFGSLL*VLPTSLTCILC Trigger: GCAGAGGATGCAGGTGAGAGAAGTCGGCAATACCCAAAGGAGAGAGCCAAAAAGAAGAAGCGGAAGAGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CAA 72 bp | GGTCCCTCTTCCGCTTCTTCTTTTTGGCTCTCTCCTTaGGGTATTGCCGACTTCTCTCACCTGCATCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GPSSASSFWLSP*GIADFSHLHPL Trigger: CAGAGGATGCAGGTGAGAGAAGTCGGCAATACCCAAAGGAGAGAGCCAAAAAGAAGAAGCGGAAGAGGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CCA 72 bp | AGTCTCTGTCAGGCTTCTCCTCACCCGAGGTTAGTGTaGCTGTCTTCACAAACTTCTGATACAGCAAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLCQASPHPRLV*LSSQTSDTASW Trigger: CCAGCTTGCTGTATCAGAAGTTTGTGAAGACAGCCACACTAACCTCGGGTGAGGAGAAGCCTGACAGAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS CCA 72 bp | ATCTCATCAGTCAGAATCTTTGGGGGCGTGGGCTCATaGTTGTCAACATCACTGCAGTTCCCCAAGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ISSVRIFGGVGS*LSTSLQFPKSL Trigger: CAGAGACTTGGGGAACTGCAGTGATGTTGACAACCATGAGCCCACGCCCCCAAAGATTCTGACTGATGAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS CAA 72 bp | TCATCAGTCAGAATCTTTGGGGGCGTGGGCTCATGGTaGTCAACATCACTGCAGTTCCCCAAGTCTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSVRIFGGVGSW*STSLQFPKSLS Trigger: TGACAGAGACTTGGGGAACTGCAGTGATGTTGACAACCATGAGCCCACGCCCCCAAAGATTCTGACTGATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS CAA 72 bp | ACTTCAGACCCTCGGTCCCTCTTCCGCTTCTTCTTTTaGGCTCTCTCCTTTGGGTATTGCCGACTTCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TSDPRSLFRFFF*ALSFGYCRLLS Trigger: TGAGAGAAGTCGGCAATACCCAAAGGAGAGAGCCAAAAAGAAGAAGCGGAAGAGGGACCGAGGGTCTGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS CAA 90 bp | GCAGTCTTGTTGAAGAGATCACTCCACCAGTGGTCTGTAAATTCCTaGGCAGGGTCATGTCCCACCCCATGGTTATCTTGCTTCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: AVLLKRSLHQWSVNS*AGSCPTPWLSCFSV Trigger: GACACTGAAGCAAGATAACCATGGGGTGGGACATGACCCTGCCAAGGAATTTACAGACCACTGGTGGAGTGATCTCTTCAACAAGACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 ENSMUST00000194258.6 |
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| CDS GCA 72 bp | CATCCTCTGCTACCCATGTCCCACCATCATCTTTACTaGTTACATCTAAGTCCTCCTCACAGCACTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: HPLLPMSHHHLY*LHLSPPHSTAV Trigger: GACAGCAGTGCTGTGAGGAGGACTTAGATGTAAGCAGTAAAGATGATGGTGGGACATGGGTAGCAGAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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| CDS GCA 72 bp | CTTTGGGTATTGCCGACTTCTCTCACCTGCATCCTCTaGTACCCATGTCCCACCATCATCTTTACTGCTTAC | + |
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Preference number: 6 (lower is better) Translates to: LWVLPTSLTCIL*YPCPTIIFTAY Trigger: GTAAGCAGTAAAGATGATGGTGGGACATGGGTAGCAGAGGATGCAGGTGAGAGAAGTCGGCAATACCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029707.13 ENSMUST00000166021.8 ENSMUST00000193398.2 |
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