Pregenerated sensors for GPATCH3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028850Ensembl transcript IDs: ENSMUST00000030662.3
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTGAGGTAGAGAAACTGGGCATGCTCAGGGCTGCTCCCAGGCTCTaGGCTGCTTCTCAGGTCCACAGGGCAAGATCCAGGCAGAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: FEVEKLGMLRAAPRL*AASQVHRARSRQRA Trigger: AGCCCTCTGCCTGGATCTTGCCCTGTGGACCTGAGAAGCAGCCCAGAGCCTGGGAGCAGCCCTGAGCATGCCCAGTTTCTCTACCTCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| 3UTR CCA 90 bp | GTCTCTAGGCAGAGGGTAGACGTGGTAAGGGACCGCGACGCTCTCTaGATCAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: VSRQRVDVVRDRDAL*INSLVPFPSFTELF Trigger: GAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTGATCCAGAGAGCGTCGCGGTCCCTTACCACGTCTACCCTCTGCCTAGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| 3UTR GCA 90 bp | AGCTTCACGGAGCTCTTCAGACAACCCTCAAACCCGACTGGACGGTaGCACAGGCAGTCCAGATCTTCACTGTTCTGGGCAAACCCAAAC | + |
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Preference number: 1 (lower is better) Translates to: SFTELFRQPSNPTGR*HRQSRSSLFWANPN Trigger: GTTTGGGTTTGCCCAGAACAGTGAAGATCTGGACTGCCTGTGGCACCGTCCAGTCGGGTTTGAGGGTTGTCTGAAGAGCTCCGTGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAAACCCGAGGGCATGCTCAGGGCTaGTCCCAGGCTCTGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LWSPFPASRSSSDNPQTRGHAQG*SQALGC Trigger: GCAGCCCAGAGCCTGGGAGCAGCCCTGAGCATGCCC...TCGGGTTTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| 3UTR-3UTR GCA 90 bp | CCAGATCTTCACTGTTCTGGGCAAACCCAAACAAGCACTAGGGCCTGGAGACCATCCCAGGCTCTGGGCTaGTTCTCAGGTCCACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PDLHCSGQTQTSTRAWRPSQALG*FSGPQG Trigger: GCCCTGTGGACCTGAGAAGCAGCCCAGAGCCTGGGA...TGGTCTCCAGGCCCTAGTGCTTGTTTGGGTTTGCCCAGAACAGTGAAGATCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGGATCAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACGCTGCTCCCAGGCTCTaGGCTGCTTCTCAGGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SGSILWSPFPASRSSSDNAAPRL*AASQVH Trigger: GTGGACCTGAGAAGCAGCCCAGAGCCTGGGAGCAGC...GTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTGATCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| 3UTR CCA 72 bp | CAGAGGGTAGACGTGGTAAGGGACCGCGACGCTCTCTaGATCAATTCTCTGGTCCCCTTTCCCAGCTTCACG | + |
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Preference number: 3 (lower is better) Translates to: QRVDVVRDRDAL*INSLVPFPSFT Trigger: CGTGAAGCTGGGAAAGGGGACCAGAGAATTGATCCAGAGAGCGTCGCGGTCCCTTACCACGTCTACCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| 3UTR GCA 72 bp | GAGCTCTTCAGACAACCCTCAAACCCGACTGGACGGTaGCACAGGCAGTCCAGATCTTCACTGTTCTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: ELFRQPSNPTGR*HRQSRSSLFWA Trigger: TGCCCAGAACAGTGAAGATCTGGACTGCCTGTGGCACCGTCCAGTCGGGTTTGAGGGTTGTCTGAAGAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | CACAGGGCAAGATCCAGGCAGAGGGCTAAGTCCCTGCCGCAGAGTGATCCTGACATGCTGGTGGGTGGCTaGCGCCGGAGCAAGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: HRARSRQRAKSLPQSDPDMLVGG*RRSKVS Trigger: GGAGACCTTGCTCCGGCGCCAGCCACCCACCAGCAT...GTCAGGATCACTCTGCGGCAGGGACTTAGCCCTCTGCCTGGATCTTGCCCTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR GCA 90 bp | CACAGGGCAAGATCCAGGCAGAGGGCTAAGTCCCTGCCGCAGAGTGATCCTGACGGCGACCGGAGTACATaGGAAGCAGCCGCTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: HRARSRQRAKSLPQSDPDGDRST*EAAAGL Trigger: AAGCCCAGCGGCTGCTTCGCATGTACTCCGGTCGCC...GTCAGGATCACTCTGCGGCAGGGACTTAGCCCTCTGCCTGGATCTTGCCCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR GCA 90 bp | CAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAAACGACGCAGCAGCAGGTaGGGGTCTGGGCTGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: QFSGPLSQLHGALQTTLKRRSSR*GSGLPQ Trigger: CTGCGGCAGCCCAGACCCGCACCTGCTGCTGCGTCG...TTTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | CTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAAACCCGATCCGGCCGATGCCCTTaGTGTGGCGCTCAAAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LWSPFPASRSSSDNPQTRSGRCP*CGAQRC Trigger: GCACCTTTGAGCGCCACACCAAGGGCATCGGCCGGA...TCGGGTTTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | CCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAAACCCGACTGGACGGAAACTTCATGCTGGTaGGTGGCTGGCGCCGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PLSQLHGALQTTLKPDWTETSCW*VAGAGA Trigger: TGCTCCGGCGCCAGCCACCCACCAGCATGAAGTTTC...CGTCCAGTCGGGTTTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | GGATCAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCCTTCAGCCCAGCCCTaGCGCTCCATCACCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: GSILWSPFPASRSSSDNPPSAQP*RSITFR Trigger: CCGGAAGGTGATGGAGCGCCAGGGCTGGGCTGAAGG...AGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR TCA 90 bp | CCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAAACCCGACTGGACGCATAGATGGTGGAAATaGGCCCCAAGCCAGTTCGAC | + |
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Preference number: 4 (lower is better) Translates to: PLSQLHGALQTTLKPDWTHRWWK*APSQFD Trigger: GTCGAACTGGCTTGGGGCTCATTTCCACCATCTATG...CGTCCAGTCGGGTTTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR GCA 90 bp | CTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAAACCCGACGCTTGCATCTAGGATaGTGGCCATCTCCATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LWSPFPASRSSSDNPQTRRLHLG*WPSPSR Trigger: CCTGGATGGAGATGGCCAGCATCCTAGATGCAAGCG...TCGGGTTTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR GCA 90 bp | GGATCAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCTGTCCGAAACTTCATaGTGGTGGGTGGCTGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GSILWSPFPASRSSSDNPLSETS*WWVAGA Trigger: GGCGCCAGCCACCCACCAGCATGAAGTTTCGGACAG...AGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | TCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAAACCCGACTGCCCACATTGCCATTaGGCATCAGCACTGGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: SGPLSQLHGALQTTLKPDCPHCH*ASALAD Trigger: ATCCGCCAGTGCTGATGCCCAATGGCAATGTGGGCA...GTCGGGTTTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | CCAGATCTTCACTGTTCTGGGCAAACCCAAACAAGCACTAGGGCCTGGAGACCACCGATGCCCTTGGTGTaGCGCTCAAAGGTGCCGACT | + |
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Preference number: 4 (lower is better) Translates to: PDLHCSGQTQTSTRAWRPPMPLV*RSKVPT Trigger: AGTCGGCACCTTTGAGCGCCACACCAAGGGCATCGG...TGGTCTCCAGGCCCTAGTGCTTGTTTGGGTTTGCCCAGAACAGTGAAGATCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | CAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAAACTTCATGCTGGTGGGTaGCTGGCGCCGGAGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: QFSGPLSQLHGALQTTLKLHAGG*LAPEQG Trigger: ACCTTGCTCCGGCGCCAGCCACCCACCAGCATGAAG...TTTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | GTCCAGATCTTCACTGTTCTGGGCAAACCCAAACAAGCACTAGGGCCTGGAGACTCCGAAACTTCATGCTaGTGGGTGGCTGGCGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: VQIFTVLGKPKQALGPGDSETSC*WVAGAG Trigger: TCCGGCGCCAGCCACCCACCAGCATGAAGTTTCGGA...GTCTCCAGGCCCTAGTGCTTGTTTGGGTTTGCCCAGAACAGTGAAGATCTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR TCA 90 bp | GTCCAGATCTTCACTGTTCTGGGCAAACCCAAACAAGCACTAGGGCCTGGAGACGTCATCGTCCTCTTCTaGGCCAGACTCCTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VQIFTVLGKPKQALGPGDVIVLF*ARLLLL Trigger: GAGGAGGAGGAGTCTGGCTCAGAAGAGGACGATGAC...GTCTCCAGGCCCTAGTGCTTGTTTGGGTTTGCCCAGAACAGTGAAGATCTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR TCA 90 bp | GCCACAGGCAGTCCAGATCTTCACTGTTCTGGGCAAACCCAAACAAGCACTAGGACAGAGCCATCTTCCTaGCCCTCACGGAGTCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: ATGSPDLHCSGQTQTSTRTEPSS*PSRSLR Trigger: ACGGAGACTCCGTGAGGGTCAGGAAGATGGCTCTGT...CCTAGTGCTTGTTTGGGTTTGCCCAGAACAGTGAAGATCTGGACTGCCTGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR GCA 90 bp | GCCACAGGCAGTCCAGATCTTCACTGTTCTGGGCAAACCCAAACAAGCACTAGGTTCAGCTCCGGGAGCTaGTTCAGGTCAGCCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: ATGSPDLHCSGQTQTSTRFSSGS*FRSARV Trigger: TACCCTGGCTGACCTGAAGCAGCTCCCGGAGCTGAA...CCTAGTGCTTGTTTGGGTTTGCCCAGAACAGTGAAGATCTGGACTGCCTGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR GCA 90 bp | TCTGGATCAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACTCCTCCTCCTGCTGCTaGCCTTCATCCTCCGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SGSILWSPFPASRSSSDNSSSCC*PSSSGS Trigger: TGAGCCGGAGGATGAAGGGCAGCAGCAGGAGGAGGA...GTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTGATCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | GGATCAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTATTGGGCATCAGCACTaGCGGATTCAGCTCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GSILWSPFPASRSSSDNPIGHQH*RIQLRE Trigger: CTCCCGGAGCTGAATCCGCCAGTGCTGATGCCCAAT...AGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | GTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAAACCCGACTGGACCGGTCTTGGGAAACTaGAGCTGTAGCTGGGTAATG | + |
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Preference number: 4 (lower is better) Translates to: VPFPSFTELFRQPSNPTGPVLGN*SCSWVM Trigger: CATTACCCAGCTACAGCTCCAGTTTCCCAAGACCGG...TCCAGTCGGGTTTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | CTCTCTGGATCAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACCGTTCCAGGCGCATTTaGACAGAGTCACGGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: LSGSILWSPFPASRSSSDRSRRI*TESRAS Trigger: GGATGCCCGTGACTCTGTCCAAATGCGCCTGGAACG...GTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTGATCCAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR GCA 90 bp | TCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAAACCCGACTCTGCTGTGTACACGTaGTCTTCTTGCTCCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: SGPLSQLHGALQTTLKPDSAVYT*SSCSTV Trigger: GACTGTGGAGCAAGAAGAGCACGTGTACACAGCAGA...GTCGGGTTTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | CAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAAAGGGAGGAGCCGGTCTTaGGAAACTGGAGCTGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: QFSGPLSQLHGALQTTLKGRSRS*ETGAVA Trigger: AGCTACAGCTCCAGTTTCCCAAGACCGGCTCCTCCC...TTTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | TCTGGATCAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACTTGCATCTAGGATGCTaGCCATCTCCATCCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SGSILWSPFPASRSSSDNLHLGC*PSPSRA Trigger: GGCCCTGGATGGAGATGGCCAGCATCCTAGATGCAA...GTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTGATCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR TCA 90 bp | TCAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAATTGCTCCACAGTCTCTaGGTCCTCATACAGAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SILWSPFPASRSSSDNPQLLHSL*VLIQKG Trigger: CCCTTTCTGTATGAGGACTCAGAGACTGTGGAGCAA...TTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR GCA 90 bp | TCAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAATACACGTGCTCTTCTTaGTCCACAGTCTCTGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SILWSPFPASRSSSDNPQYTCSS*STVSES Trigger: GGACTCAGAGACTGTGGAGCAAGAAGAGCACGTGTA...TTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR GCA 90 bp | CAGATCTTCACTGTTCTGGGCAAACCCAAACAAGCACTAGGGCCTGGAGACCAACGGGGCCTCTTCAGTTaGCTAAATGGCTGTAACTTC | + |
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Preference number: 4 (lower is better) Translates to: QIFTVLGKPKQALGPGDQRGLFS*LNGCNF Trigger: GAAGTTACAGCCATTTAGGCAACTGAAGAGGCCCCG...TTGGTCTCCAGGCCCTAGTGCTTGTTTGGGTTTGCCCAGAACAGTGAAGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR GCA 90 bp | CCAGATCTTCACTGTTCTGGGCAAACCCAAACAAGCACTAGGGCCTGGAGACCACAGTCATCAGCTGTCTaGTCATCAAAATCTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PDLHCSGQTQTSTRAWRPQSSAV*SSKSPS Trigger: GGAAGGAGATTTTGATGAGCAGACAGCTGATGACTG...TGGTCTCCAGGCCCTAGTGCTTGTTTGGGTTTGCCCAGAACAGTGAAGATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CCA 90 bp | TCAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAAAACTGGAGCTGTAGCTaGGTAATGATTCTAGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SILWSPFPASRSSSDNPQNWSCS*VMILGG Trigger: ACCACCTAGAATCATTACCCAGCTACAGCTCCAGTT...TTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 90 bp | CGCTCCCCTCACCGAGACGACGCAGCAGCAGGTGCGGGTCTGGGCTaGCGCAGAGCCCCGGGCGCGGACAGCGCGGGCATCGGAGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: RSPHRDDAAAGAGLG*RRAPGADSAGIGGR Trigger: CCGGCCTCCGATGCCCGCGCTGTCCGCGCCCGGGGCTCTGCGGCAGCCCAGACCCGCACCTGCTGCTGCGTCGTCTCGGTGAGGGGAGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CCA 90 bp | CCATCCAGGGCCTCAGGCACCCCGGAGCACCTGCTGCCCAGGCCCTaGCCTTCAGCCCAGCCCTGGCGCTCCATCACCTTCCGGCCGATG | + |
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Preference number: 5 (lower is better) Translates to: PSRASGTPEHLLPRP*PSAQPWRSITFRPM Trigger: CATCGGCCGGAAGGTGATGGAGCGCCAGGGCTGGGCTGAAGGCCAGGGCCTGGGCAGCAGGTGCTCCGGGGTGCCTGAGGCCCTGGATGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 90 bp | TCGAAGAGCCGCTCTGTAGTCCGCTCCTGCCCGGTCACATCCTCGTaGAGAGCTTCGTGTCGCTCCCACTCCTCACCCCGGTCATCGTCC | + |
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Preference number: 5 (lower is better) Translates to: SKSRSVVRSCPVTSS*RASCRSHSSPRSSS Trigger: GGACGATGACCGGGGTGAGGAGTGGGAGCGACACGAAGCTCTGCACGAGGATGTGACCGGGCAGGAGCGGACTACAGAGCGGCTCTTCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CCA 90 bp | AACTTCTCTCCATGGTATCCCAAGCCGCGCTTGCATCTAGGATGCTaGCCATCTCCATCCAGGGCCTCAGGCACCCCGGAGCACCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: NFSPWYPKPRLHLGC*PSPSRASGTPEHLL Trigger: CAGCAGGTGCTCCGGGGTGCCTGAGGCCCTGGATGGAGATGGCCAGCATCCTAGATGCAAGCGCGGCTTGGGATACCATGGAGAGAAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 90 bp | TGTAACTTCTCTCCATGGTATCCCAAGCCGCGCTTGCATCTAGGATaGTGGCCATCTCCATCCAGGGCCTCAGGCACCCCGGAGCACCTG | + |
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Preference number: 5 (lower is better) Translates to: CNFSPWYPKPRLHLG*WPSPSRASGTPEHL Trigger: CAGGTGCTCCGGGGTGCCTGAGGCCCTGGATGGAGATGGCCAGCATCCTAGATGCAAGCGCGGCTTGGGATACCATGGAGAGAAGTTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS TCA 90 bp | CGCTCAAAGGTGCCGACTTGGCCACCTAGCACAGAGCCATCTTCCTaGCCCTCACGGAGTCTCCGTTCCAGGCGCATTTGGACAGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: RSKVPTWPPSTEPSS*PSRSLRSRRIWTES Trigger: TGACTCTGTCCAAATGCGCCTGGAACGGAGACTCCGTGAGGGTCAGGAAGATGGCTCTGTGCTAGGTGGCCAAGTCGGCACCTTTGAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 90 bp | TCATCGTCCTCTTCTGAGCCAGACTCCTCCTCCTCCTCCTGCTGCTaGCCTTCATCCTCCGGCTCATCAAAGGAGCCAGCTGCTGGATCT | + |
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Preference number: 5 (lower is better) Translates to: SSSSSEPDSSSSSCC*PSSSGSSKEPAAGS Trigger: AGATCCAGCAGCTGGCTCCTTTGATGAGCCGGAGGATGAAGGGCAGCAGCAGGAGGAGGAGGAGGAGTCTGGCTCAGAAGAGGACGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 90 bp | TTAAGTTCAATCTCCTCCTCGAAGAGCCGCTCTGTAGTCCGCTCCTaGCCGGTCACATCCTCGTGCAGAGCTTCGTGTCGCTCCCACTCC | + |
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Preference number: 5 (lower is better) Translates to: LSSISSSKSRSVVRS*PVTSSCRASCRSHS Trigger: GGAGTGGGAGCGACACGAAGCTCTGCACGAGGATGTGACCGGGCAGGAGCGGACTACAGAGCGGCTCTTCGAGGAGGAGATTGAACTTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CAA 90 bp | CCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCAAACCCGACTGGACGGAGTCACGGGCATCCTaGTCTCCTCCATCTCTGTCG | + |
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Preference number: 5 (lower is better) Translates to: PLSQLHGALQTTLKPDWTESRAS*SPPSLS Trigger: CGACAGAGATGGAGGAGACAAGGATGCCCGTGACTC...CGTCCAGTCGGGTTTGAGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CAA 90 bp | GGATCAATTCTCTGGTCCCCTTTCCCAGCTTCACGGAGCTCTTCAGACAACCCTCGGGAGGAGCCGGTCTaGGGAAACTGGAGCTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: GSILWSPFPASRSSSDNPREEPV*GNWSCS Trigger: GCTACAGCTCCAGTTTCCCAAGACCGGCTCCTCCCG...AGGGTTGTCTGAAGAGCTCCGTGAAGCTGGGAAAGGGGACCAGAGAATTGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CAA 90 bp | CCAGATCTTCACTGTTCTGGGCAAACCCAAACAAGCACTAGGGCCTGGAGACCATTCCGGCCGATGCCCTaGGTGTGGCGCTCAAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: PDLHCSGQTQTSTRAWRPFRPMP*VWRSKV Trigger: CACCTTTGAGCGCCACACCAAGGGCATCGGCCGGAA...TGGTCTCCAGGCCCTAGTGCTTGTTTGGGTTTGCCCAGAACAGTGAAGATCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 90 bp | CTTCTTGCTCCACAGTCTCTGAGTCCTCATACAGAAAGGGCACGTTaGCATAGCGCCGGGAGGAGCCGGTCTTGGGAAACTGGAGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: LLAPQSLSPHTERAR*HSAGRSRSWETGAV Trigger: TACAGCTCCAGTTTCCCAAGACCGGCTCCTCCCGGCGCTATGGCAACGTGCCCTTTCTGTATGAGGACTCAGAGACTGTGGAGCAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 90 bp | CCCTGGGGGATCTCCTCCCCTTCTGCTGTGTACACGTGCTCTTCTTaGTCCACAGTCTCTGAGTCCTCATACAGAAAGGGCACGTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: PWGISSPSAVYTCSS*STVSESSYRKGTLP Trigger: TGGCAACGTGCCCTTTCTGTATGAGGACTCAGAGACTGTGGAGCAAGAAGAGCACGTGTACACAGCAGAAGGGGAGGAGATCCCCCAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS-3UTR CAA 90 bp | CAGATCTTCACTGTTCTGGGCAAACCCAAACAAGCACTAGGGCCTGGAGACCAAGTGCCCACATTGCCATaGGGCATCAGCACTGGCGGA | + |
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Preference number: 5 (lower is better) Translates to: QIFTVLGKPKQALGPGDQVPTLP*GISTGG Trigger: TCCGCCAGTGCTGATGCCCAATGGCAATGTGGGCAC...TTGGTCTCCAGGCCCTAGTGCTTGTTTGGGTTTGCCCAGAACAGTGAAGATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 72 bp | CACCGAGACGACGCAGCAGCAGGTGCGGGTCTGGGCTaGCGCAGAGCCCCGGGCGCGGACAGCGCGGGCATC | + |
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Preference number: 6 (lower is better) Translates to: HRDDAAAGAGLG*RRAPGADSAGI Trigger: GATGCCCGCGCTGTCCGCGCCCGGGGCTCTGCGGCAGCCCAGACCCGCACCTGCTGCTGCGTCGTCTCGGTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CAA 90 bp | GTCCAGCCACCGGCGACCGGAGTACATGCGAAGCAGCCGCTGGGCTaGCGCCGCTCCCCTCACCGAGACGACGCAGCAGCAGGTGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: VQPPATGVHAKQPLG*RRSPHRDDAAAGAG Trigger: ACCCGCACCTGCTGCTGCGTCGTCTCGGTGAGGGGAGCGGCGCAAGCCCAGCGGCTGCTTCGCATGTACTCCGGTCGCCGGTGGCTGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CCA 72 bp | AGCCACCGGCGACCGGAGTACATGCGAAGCAGCCGCTaGGCTTGCGCCGCTCCCCTCACCGAGACGACGCAG | + |
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Preference number: 6 (lower is better) Translates to: SHRRPEYMRSSR*ACAAPLTETTQ Trigger: CTGCGTCGTCTCGGTGAGGGGAGCGGCGCAAGCCCAGCGGCTGCTTCGCATGTACTCCGGTCGCCGGTGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 72 bp | TCCCCTGAGAGTCCAGCCACCGGCGACCGGAGTACATaGGAAGCAGCCGCTGGGCTTGCGCCGCTCCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SPESPATGDRST*EAAAGLAPLPS Trigger: TGAGGGGAGCGGCGCAAGCCCAGCGGCTGCTTCGCATGTACTCCGGTCGCCGGTGGCTGGACTCTCAGGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 72 bp | CGCTCTGTAGTCCGCTCCTGCCCGGTCACATCCTCGTaGAGAGCTTCGTGTCGCTCCCACTCCTCACCCCGG | + |
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Preference number: 6 (lower is better) Translates to: RSVVRSCPVTSS*RASCRSHSSPR Trigger: CCGGGGTGAGGAGTGGGAGCGACACGAAGCTCTGCACGAGGATGTGACCGGGCAGGAGCGGACTACAGAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS TCA 72 bp | TCGCTCCCACTCCTCACCCCGGTCATCGTCCTCTTCTaGGCCAGACTCCTCCTCCTCCTCCTGCTGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SLPLLTPVIVLF*ARLLLLLLLLP Trigger: GGGCAGCAGCAGGAGGAGGAGGAGGAGTCTGGCTCAGAAGAGGACGATGACCGGGGTGAGGAGTGGGAGCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CCA 72 bp | CCATGGTATCCCAAGCCGCGCTTGCATCTAGGATGCTaGCCATCTCCATCCAGGGCCTCAGGCACCCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: PWYPKPRLHLGC*PSPSRASGTPE Trigger: CTCCGGGGTGCCTGAGGCCCTGGATGGAGATGGCCAGCATCCTAGATGCAAGCGCGGCTTGGGATACCATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 72 bp | ATCTCCTCCTCGAAGAGCCGCTCTGTAGTCCGCTCCTaGCCGGTCACATCCTCGTGCAGAGCTTCGTGTCGC | + |
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Preference number: 6 (lower is better) Translates to: ISSSKSRSVVRS*PVTSSCRASCR Trigger: GCGACACGAAGCTCTGCACGAGGATGTGACCGGGCAGGAGCGGACTACAGAGCGGCTCTTCGAGGAGGAGAT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 72 bp | CCTTCCGGCCGATGCCCTTGGTGTGGCGCTCAAAGGTaGCGACTTGGCCACCTAGCACAGAGCCATCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PSGRCPWCGAQR*RLGHLAQSHLP Trigger: AGGAAGATGGCTCTGTGCTAGGTGGCCAAGTCGGCACCTTTGAGCGCCACACCAAGGGCATCGGCCGGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 72 bp | TCTCCATGGTATCCCAAGCCGCGCTTGCATCTAGGATaGTGGCCATCTCCATCCAGGGCCTCAGGCACCCCG | + |
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Preference number: 6 (lower is better) Translates to: SPWYPKPRLHLG*WPSPSRASGTP Trigger: CGGGGTGCCTGAGGCCCTGGATGGAGATGGCCAGCATCCTAGATGCAAGCGCGGCTTGGGATACCATGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CCA 72 bp | GTCATATCTGTCCGAAACTTCATGCTGGTGGGTGGCTaGCGCCGGAGCAAGGTCTCCCCCTGGTCTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: VISVRNFMLVGG*RRSKVSPWSWG Trigger: GCCCCAAGACCAGGGGGAGACCTTGCTCCGGCGCCAGCCACCCACCAGCATGAAGTTTCGGACAGATATGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS TCA 72 bp | GTGCCGACTTGGCCACCTAGCACAGAGCCATCTTCCTaGCCCTCACGGAGTCTCCGTTCCAGGCGCATTTGG | + |
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Preference number: 6 (lower is better) Translates to: VPTWPPSTEPSS*PSRSLRSRRIW Trigger: CCAAATGCGCCTGGAACGGAGACTCCGTGAGGGTCAGGAAGATGGCTCTGTGCTAGGTGGCCAAGTCGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 72 bp | TCTTCTGAGCCAGACTCCTCCTCCTCCTCCTGCTGCTaGCCTTCATCCTCCGGCTCATCAAAGGAGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSEPDSSSSSCC*PSSSGSSKEPA Trigger: AGCTGGCTCCTTTGATGAGCCGGAGGATGAAGGGCAGCAGCAGGAGGAGGAGGAGGAGTCTGGCTCAGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 72 bp | TCCTCTTCTGAGCCAGACTCCTCCTCCTCCTCCTGCTaGTGCCCTTCATCCTCCGGCTCATCAAAGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSSEPDSSSSSC*CPSSSGSSKEP Trigger: TGGCTCCTTTGATGAGCCGGAGGATGAAGGGCAGCAGCAGGAGGAGGAGGAGGAGTCTGGCTCAGAAGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CCA 72 bp | CGGGAGGAGCCGGTCTTGGGAAACTGGAGCTGTAGCTaGGTAATGATTCTAGGTGGTAGACGGCAGGACCGG | + |
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Preference number: 6 (lower is better) Translates to: REEPVLGNWSCS*VMILGGRRQDR Trigger: CCGGTCCTGCCGTCTACCACCTAGAATCATTACCCAGCTACAGCTCCAGTTTCCCAAGACCGGCTCCTCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 72 bp | CCACAGTCTCTGAGTCCTCATACAGAAAGGGCACGTTaGCATAGCGCCGGGAGGAGCCGGTCTTGGGAAACT | + |
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Preference number: 6 (lower is better) Translates to: PQSLSPHTERAR*HSAGRSRSWET Trigger: AGTTTCCCAAGACCGGCTCCTCCCGGCGCTATGGCAACGTGCCCTTTCTGTATGAGGACTCAGAGACTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CAA 72 bp | TTCCTGACCCTCACGGAGTCTCCGTTCCAGGCGCATTaGGACAGAGTCACGGGCATCCTTGTCTCCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: FLTLTESPFQAH*DRVTGILVSSI Trigger: GATGGAGGAGACAAGGATGCCCGTGACTCTGTCCAAATGCGCCTGGAACGGAGACTCCGTGAGGGTCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CAA 72 bp | GGCTGTAACTTCTCTCCATGGTATCCCAAGCCGCGCTaGCATCTAGGATGCTGGCCATCTCCATCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GCNFSPWYPKPR*HLGCWPSPSRA Trigger: GGCCCTGGATGGAGATGGCCAGCATCCTAGATGCAAGCGCGGCTTGGGATACCATGGAGAGAAGTTACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CAA 90 bp | AGAGCCATCTTCCTGACCCTCACGGAGTCTCCGTTCCAGGCGCATTaGGACAGAGTCACGGGCATCCTTGTCTCCTCCATCTCTGTCGTA | + |
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Preference number: 6 (lower is better) Translates to: RAIFLTLTESPFQAH*DRVTGILVSSISVV Trigger: TACGACAGAGATGGAGGAGACAAGGATGCCCGTGACTCTGTCCAAATGCGCCTGGAACGGAGACTCCGTGAGGGTCAGGAAGATGGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS GCA 72 bp | CCCTGGGGGATCTCCTCCCCTTCTGCTGTGTACACGTaGTCTTCTTGCTCCACAGTCTCTGAGTCCTCATAC | + |
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Preference number: 6 (lower is better) Translates to: PWGISSPSAVYT*SSCSTVSESSY Trigger: GTATGAGGACTCAGAGACTGTGGAGCAAGAAGAGCACGTGTACACAGCAGAAGGGGAGGAGATCCCCCAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CCA 72 bp | AAAAGTCATATCTGTCCGAAACTTCATGCTGGTGGGTaGCTGGCGCCGGAGCAAGGTCTCCCCCTGGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: KSHICPKLHAGG*LAPEQGLPLVL Trigger: CAAGACCAGGGGGAGACCTTGCTCCGGCGCCAGCCACCCACCAGCATGAAGTTTCGGACAGATATGACTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CCA 72 bp | TCACAAAAGTCATATCTGTCCGAAACTTCATGCTGGTaGGTGGCTGGCGCCGGAGCAAGGTCTCCCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SQKSYLSETSCW*VAGAGARSPPG Trigger: ACCAGGGGGAGACCTTGCTCCGGCGCCAGCCACCCACCAGCATGAAGTTTCGGACAGATATGACTTTTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CCA 72 bp | CCTTCACAAAAGTCATATCTGTCCGAAACTTCATGCTaGTGGGTGGCTGGCGCCGGAGCAAGGTCTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PSQKSYLSETSC*WVAGAGARSPP Trigger: AGGGGGAGACCTTGCTCCGGCGCCAGCCACCCACCAGCATGAAGTTTCGGACAGATATGACTTTTGTGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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| CDS CCA 72 bp | CTCTTCAGTTGCCTAAATGGCTGTAACTTCTCTCCATaGTATCCCAAGCCGCGCTTGCATCTAGGATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LFSCLNGCNFSP*YPKPRLHLGCW Trigger: CCAGCATCCTAGATGCAAGCGCGGCTTGGGATACCATGGAGAGAAGTTACAGCCATTTAGGCAACTGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030662.3 |
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