Pregenerated sensors for GPATCH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039210Ensembl transcript IDs: ENSMUST00000044812.12, ENSMUST00000065573.14, ENSMUST00000110943.9, ENSMUST00000159748.8, ENSMUST00000160471.8, ENSMUST00000160481.8, ENSMUST00000160570.2
Found 382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CTGCCATCTCGCCCGAGGCCTGACCCGGGTGTCCATCCCATACTCTaGAGCATGCGGTTCCCGATGTTGCTCTCTAGGATCGGCTGGGCG | + |
Preference number: 1 (lower is better) Translates to: LPSRPRPDPGVHPIL*SMRFPMLLSRIGWA Trigger: CGCCCAGCCGATCCTAGAGAGCAACATCGGGAACCGCATGCTTCAGAGTATGGGATGGACACCCGGGTCAGGCCTCGGGCGAGATGGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR GCA 90 bp | ACCCTTTCGGCCTCTGAACGGCTTGAACTGGCTCCGCGATCCCTCTaGCATCTCGCCCGAGGCCTGACCCGGGTGTCCATCCCATACTCT | + |
Preference number: 1 (lower is better) Translates to: TLSASERLELAPRSL*HLARGLTRVSIPYS Trigger: AGAGTATGGGATGGACACCCGGGTCAGGCCTCGGGCGAGATGGCAGAGGGATCGCGGAGCCAGTTCAAGCCGTTCAGAGGCCGAAAGGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR GCA 90 bp | CTCGCCCGAGGCCTGACCCGGGTGTCCATCCCATACTCTGAAGCATaGGGTTCCCGATGTTGCTCTCTAGGATCGGCTGGGCGTTCTCAC | + |
Preference number: 1 (lower is better) Translates to: LARGLTRVSIPYSEA*GSRCCSLGSAGRSH Trigger: GTGAGAACGCCCAGCCGATCCTAGAGAGCAACATCGGGAACCGCATGCTTCAGAGTATGGGATGGACACCCGGGTCAGGCCTCGGGCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR CCA 90 bp | CTCACTAAGCAAGCCTTCCCGGACATGCTTAGGACTCCCTGCATGTaGGAGAGGGAGCACGTGGGAGAGAGGAGGACCACACTACTTAGT | + |
Preference number: 1 (lower is better) Translates to: LTKQAFPDMLRTPCM*EREHVGERRTTLLS Trigger: ACTAAGTAGTGTGGTCCTCCTCTCTCCCACGTGCTCCCTCTCCCACATGCAGGGAGTCCTAAGCATGTCCGGGAAGGCTTGCTTAGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR CCA 90 bp | TGTGATGGAATCCCATTTCTATCACTGGCGGGACGCTATGCAGCCTaGAAGCTAGCTGGAGGCAACGTCAGAGGTCGGCTTCAAACCAGT | + |
Preference number: 1 (lower is better) Translates to: CDGIPFLSLAGRYAA*KLAGGNVRGRLQTS Trigger: ACTGGTTTGAAGCCGACCTCTGACGTTGCCTCCAGCTAGCTTCCAGGCTGCATAGCGTCCCGCCAGTGATAGAAATGGGATTCCATCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR CCA 90 bp | AGGCCACTCTTCTTCCTCTTGGAGCTGATCCTTAACCCCAGCCTTTaGGGAGAGGTAGACATATGGAGGGCAGGGTTTGCAGGTCAGTCA | + |
Preference number: 1 (lower is better) Translates to: RPLFFLLELILNPSL*GEVDIWRAGFAGQS Trigger: TGACTGACCTGCAAACCCTGCCCTCCATATGTCTACCTCTCCCCAAAGGCTGGGGTTAAGGATCAGCTCCAAGAGGAAGAAGAGTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR TCA 90 bp | GAAACACGTGAAGGGTTGAGGTTCGTACTTGAGCACCGTGAGTTGTaGTGGAATCCCATTTCTATCACTGGCGGGACGCTATGCAGCCTG | + |
Preference number: 1 (lower is better) Translates to: ETREGLRFVLEHREL*WNPISITGGTLCSL Trigger: CAGGCTGCATAGCGTCCCGCCAGTGATAGAAATGGGATTCCATCACAACTCACGGTGCTCAAGTACGAACCTCAACCCTTCACGTGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR TCA 90 bp | GAGCTTTCTTGTGTGAAAGTAGAACTGTGGTGTCCCAGCAGCTCGTaGGGACCTTGCTGCAGAAGCTGCAGCAGAGGGTTCACATTGTCT | + |
Preference number: 1 (lower is better) Translates to: ELSCVKVELWCPSSS*GPCCRSCSRGFTLS Trigger: AGACAATGTGAACCCTCTGCTGCAGCTTCTGCAGCAAGGTCCTCACGAGCTGCTGGGACACCACAGTTCTACTTTCACACAAGAAAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR GCA 90 bp | GCAGTGCACCCGCGTGCACACATACTCAAGCACGCATGTTTAACCTaGTGTCTCAACTCTGTCTGCATAATCATTGCAGCCAGTCCCAAA | + |
Preference number: 1 (lower is better) Translates to: AVHPRAHILKHACLT*CLNSVCIIIAASPK Trigger: TTTGGGACTGGCTGCAATGATTATGCAGACAGAGTTGAGACAGCAGGTTAAACATGCGTGCTTGAGTATGTGTGCACGCGGGTGCACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR TCA 90 bp | GGTGGAGCCCCTGAAGACTTTTTAATATTCTTTGAAGGCGTTCCATaGAGGCGACTGAGTCTAGCTTGGAAACCTCCTCTGCCAGGATGG | + |
Preference number: 1 (lower is better) Translates to: GGAPEDFLIFFEGVP*RRLSLAWKPPLPGW Trigger: CCATCCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCGCCTTCATGGAACGCCTTCAAAGAATATTAAAAAGTCTTCAGGGGCTCCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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3UTR TCA 90 bp | AGAAATGAAACTCAAAGAAGAGCAAACAAGTTTGGAAAAGACCCTTaGGTCCAGTACACGGTTAGTCTCTTCGATCTTCCCTCCTACGTG | + |
Preference number: 1 (lower is better) Translates to: RNETQRRANKFGKDP*VQYTVSLFDLPSYV Trigger: CACGTAGGAGGGAAGATCGAAGAGACTAACCGTGTACTGGACTCAAGGGTCTTTTCCAAACTTGTTTGCTCTTCTTTGAGTTTCATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR CCA 90 bp | AGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTaGGTTAGGCCAGTTAGCTCAGTTTTGGGAAAAGCTATTTATATC | + |
Preference number: 1 (lower is better) Translates to: SIRMPGPSVPSVLGK*VRPVSSVLGKAIYI Trigger: GATATAAATAGCTTTTCCCAAAACTGAGCTAACTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR TCA 90 bp | ATATCTTCAAACAAACTGACTCAGGAGTTTACTAATTTACTTCAGTaGCTAAACCCTGAGCAGGCCACTCTTCTTCCTCTTGGAGCTGAT | + |
Preference number: 1 (lower is better) Translates to: ISSNKLTQEFTNLLQ*LNPEQATLLPLGAD Trigger: ATCAGCTCCAAGAGGAAGAAGAGTGGCCTGCTCAGGGTTTAGTCACTGAAGTAAATTAGTAAACTCCTGAGTCAGTTTGTTTGAAGATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | GAACTGGCTCCGCGATCCCTCTGCCATCTCGCCCGAGGCCTGACCCGGGTGTCCCGCAGCAGTCCTTTGTaGCATCTCTACCAGCCCCAA | + |
Preference number: 2 (lower is better) Translates to: ELAPRSLCHLARGLTRVSRSSPL*HLYQPQ Trigger: TTGGGGCTGGTAGAGATGGCACAAAGGACTGCTGCG...GGACACCCGGGTCAGGCCTCGGGCGAGATGGCAGAGGGATCGCGGAGCCAGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR-3UTR CCA 90 bp | CGGGGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGGGGAGAGGGAGCACGTaGGAGAGAGGAGGACCACAC | + |
Preference number: 2 (lower is better) Translates to: RGPLVSWPAHFLPRPLLRGRGST*ERGGPH Trigger: GTGTGGTCCTCCTCTCTCCCACGTGCTCCCTCTCCC...CCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACCCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | GAACTGGCTCCGCGATCCCTCTGCCATCTCGCCCGAGGCCTGACCCGGGTGTCCGAGCACCGTGAGTTGTaGTGGAATCCCATTTCTATC | + |
Preference number: 2 (lower is better) Translates to: ELAPRSLCHLARGLTRVSEHREL*WNPISI Trigger: GATAGAAATGGGATTCCATCACAACTCACGGTGCTC...GGACACCCGGGTCAGGCCTCGGGCGAGATGGCAGAGGGATCGCGGAGCCAGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR-3UTR GCA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCACTGGCGGGACGCTATaGAGCCTGGAAGCTAGCTGG | + |
Preference number: 2 (lower is better) Translates to: PTGCAPLCLSITYTHGWSTGGTL*SLEASW Trigger: CCAGCTAGCTTCCAGGCTGCATAGCGTCCCGCCAGT...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR CCA 90 bp | GGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAGGGAGAGGGAGCACGTaGGAGAGAGGAGGACCACAC | + |
Preference number: 2 (lower is better) Translates to: GPLVSWPAHFLPRPLLRKGRGST*ERGGPH Trigger: GTGTGGTCCTCCTCTCTCCCACGTGCTCCCTCTCCC...TTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | GGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAACTGGCGGGACGCTATaGAGCCTGGAAGCTAGCTGG | + |
Preference number: 2 (lower is better) Translates to: GPLVSWPAHFLPRPLLRKTGGTL*SLEASW Trigger: CCAGCTAGCTTCCAGGCTGCATAGCGTCCCGCCAGT...TTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR CCA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCGATCCTCAGACCCACTaGGTGTGCTCCACTGTGTCT | + |
Preference number: 2 (lower is better) Translates to: PTGCAPLCLSITYTHGWSDPQTH*VCSTVS Trigger: AGACACAGTGGAGCACACCCAGTGGGTCTGAGGATC...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR CAA 90 bp | CATTGTCTGGAGGGCAGTGATGGGAAGTGCCCAGAGAGAGCAGTTTaGGAGGCCCAGTGCTCAGCACATGGCCGTTCCTGTGCATCCTCT | + |
Preference number: 2 (lower is better) Translates to: HCLEGSDGKCPERAV*EAQCSAHGRSCASS Trigger: AGAGGATGCACAGGAACGGCCATGTGCTGAGCACTGGGCCTCCAAAACTGCTCTCTCTGGGCACTTCCCATCACTGCCCTCCAGACAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR CCA 90 bp | GGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAGATCCTCAGACCCACTaGGTGTGCTCCACTGTGTCT | + |
Preference number: 2 (lower is better) Translates to: GPLVSWPAHFLPRPLLRKDPQTH*VCSTVS Trigger: AGACACAGTGGAGCACACCCAGTGGGTCTGAGGATC...TTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR CCA 90 bp | GCAGAACCTCTCAATCCTGTCTGTCCACCGCAAACTAACACGGCTGCAGTGCACGGCTACCGTAGGGAGTaGATGGGAAGGGAAGAGACC | + |
Preference number: 2 (lower is better) Translates to: AEPLNPVCPPQTNTAAVHGYRRE*MGREET Trigger: GGTCTCTTCCCTTCCCATCCACTCCCTACGGTAGCC...GTGCACTGCAGCCGTGTTAGTTTGCGGTGGACAGACAGGATTGAGAGGTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | TTTGGCTACCGTAGGGAGTGGATGGGAAGGGAAGAGACCCTAACTGACTGGCTTTTGTCTGGAGGGCAGTaGTGGGAAGTGCCCAGAGAG | + |
Preference number: 2 (lower is better) Translates to: FGYRREWMGREETLTDWLLSGGQ*WEVPRE Trigger: CTCTCTGGGCACTTCCCATCACTGCCCTCCAGACAA...AAGCCAGTCAGTTAGGGTCTCTTCCCTTCCCATCCACTCCCTACGGTAGCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | GCAGAACCTCTCAATCCTGTCTGTCCACCGCAAACTAACACGGCTGCAGTGCACATGCTTAGGACTCCCTaGATGTGGGAGAGGGAGCAC | + |
Preference number: 2 (lower is better) Translates to: AEPLNPVCPPQTNTAAVHMLRTP*MWEREH Trigger: GTGCTCCCTCTCCCACATGCAGGGAGTCCTAAGCAT...GTGCACTGCAGCCGTGTTAGTTTGCGGTGGACAGACAGGATTGAGAGGTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCAAGGTGTGTAAGCTCTaGACTGGAGTGATGCTGACA | + |
Preference number: 2 (lower is better) Translates to: PTGCAPLCLSITYTHGWSKVCKL*TGVMLT Trigger: TGTCAGCATCACTCCAGTGCAGAGCTTACACACCTT...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | GGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAATGGAGGGCAGGGTTTaGAGGTCAGTCAGGATGACT | + |
Preference number: 2 (lower is better) Translates to: GPLVSWPAHFLPRPLLRKMEGRV*RSVRMT Trigger: AGTCATCCTGACTGACCTGCAAACCCTGCCCTCCAT...TTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR CCA 90 bp | GCAGAACCTCTCAATCCTGTCTGTCCACCGCAAACTAACACGGCTGCAGTGCACGATCCTCAGACCCACTaGGTGTGCTCCACTGTGTCT | + |
Preference number: 2 (lower is better) Translates to: AEPLNPVCPPQTNTAAVHDPQTH*VCSTVS Trigger: AGACACAGTGGAGCACACCCAGTGGGTCTGAGGATC...GTGCACTGCAGCCGTGTTAGTTTGCGGTGGACAGACAGGATTGAGAGGTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR-3UTR CCA 90 bp | GCAGAACCTCTCAATCCTGTCTGTCCACCGCAAACTAACACGGCTGCAGTGCACGGTCCACTTGTGTCCTaGCCAGCCCACTTCTTACCA | + |
Preference number: 2 (lower is better) Translates to: AEPLNPVCPPQTNTAAVHGPLVS*PAHFLP Trigger: TGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACC...GTGCACTGCAGCCGTGTTAGTTTGCGGTGGACAGACAGGATTGAGAGGTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR CAA 90 bp | CCTGCTGCAGTGGGTCCAGGCAACGGGGCAGCTTTCCTTCTCCTTTaGATGTCTCCTGTGCACAAGGATCCTAAATGCATGCTTGTCTGC | + |
Preference number: 2 (lower is better) Translates to: PAAVGPGNGAAFLLL*MSPVHKDPKCMLVC Trigger: GCAGACAAGCATGCATTTAGGATCCTTGTGCACAGGAGACATCAAAAGGAGAAGGAAAGCTGCCCCGTTGCCTGGACCCACTGCAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR-3UTR CCA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCATGTCTAGAAACTGCTaGAAACCGAGGAAACACGTG | + |
Preference number: 2 (lower is better) Translates to: PTGCAPLCLSITYTHGWSMSRNC*KPRKHV Trigger: CACGTGTTTCCTCGGTTTCCAGCAGTTTCTAGACAT...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGCAGACCCACTGGGTGTaGTCCACTGTGTCTGAGCAT | + |
Preference number: 2 (lower is better) Translates to: SECLVPLFLLYLVSGLGQQTHWV*STVSEH Trigger: ATGCTCAGACACAGTGGAGCACACCCAGTGGGTCTG...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGATGCTTAGGACTCCCTaGATGTGGGAGAGGGAGCAC | + |
Preference number: 2 (lower is better) Translates to: SECLVPLFLLYLVSGLGQMLRTP*MWEREH Trigger: GTGCTCCCTCTCCCACATGCAGGGAGTCCTAAGCAT...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR CCA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGGATCCTCAGACCCACTaGGTGTGCTCCACTGTGTCT | + |
Preference number: 2 (lower is better) Translates to: SECLVPLFLLYLVSGLGQDPQTH*VCSTVS Trigger: AGACACAGTGGAGCACACCCAGTGGGTCTGAGGATC...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR CAA 90 bp | CCAGGGTCAACCTACATCCCAGGGAATCCTCCCAGTCAGTTTCACTaGAGGCTAAAAGAGAGACCACCACCAATCCTGCAGCACAAACAG | + |
Preference number: 2 (lower is better) Translates to: PGSTYIPGNPPSQFH*RLKERPPPILQHKQ Trigger: CTGTTTGTGCTGCAGGATTGGTGGTGGTCTCTCTTTTAGCCTCAAGTGAAACTGACTGGGAGGATTCCCTGGGATGTAGGTTGACCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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3UTR-3UTR TCA 90 bp | GGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAACTAATTTACTTCAGTaGCTAAACCCTGAGCAGGCC | + |
Preference number: 2 (lower is better) Translates to: GPLVSWPAHFLPRPLLRKTNLLQ*LNPEQA Trigger: GGCCTGCTCAGGGTTTAGTCACTGAAGTAAATTAGT...TTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | CATCCTCTAGGGCAGGGTAAGGACACAGCAGCTGATTTCTCTGGAGACTGGAGCAAGGTGTGTAAGCTCTaGACTGGAGTGATGCTGACA | + |
Preference number: 2 (lower is better) Translates to: HPLGQGKDTAADFSGDWSKVCKL*TGVMLT Trigger: TGTCAGCATCACTCCAGTGCAGAGCTTACACACCTT...GCTCCAGTCTCCAGAGAAATCAGCTGCTGTGTCCTTACCCTGCCCTAGAGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGATGGAGGGCAGGGTTTaGAGGTCAGTCAGGATGACT | + |
Preference number: 2 (lower is better) Translates to: SECLVPLFLLYLVSGLGQMEGRV*RSVRMT Trigger: AGTCATCCTGACTGACCTGCAAACCCTGCCCTCCAT...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | GCAGAACCTCTCAATCCTGTCTGTCCACCGCAAACTAACACGGCTGCAGTGCACCACGCATGTTTAACCTaGTGTCTCAACTCTGTCTGC | + |
Preference number: 2 (lower is better) Translates to: AEPLNPVCPPQTNTAAVHHACLT*CLNSVC Trigger: GCAGACAGAGTTGAGACAGCAGGTTAAACATGCGTG...GTGCACTGCAGCCGTGTTAGTTTGCGGTGGACAGACAGGATTGAGAGGTTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | GAGGGAAGGAGCCACTTAAGATACTCTCAAACACAGGGTCGGGCAGGTTGGTGTTGCTCATCATCACTGTaGCTAAGATCCCAAGGAGCC | + |
Preference number: 2 (lower is better) Translates to: EGRSHLRYSQTQGRAGWCCSSSL*LRSQGA Trigger: GGCTCCTTGGGATCTTAGGCACAGTGATGATGAGCA...ACACCAACCTGCCCGACCCTGTGTTTGAGAGTATCTTAAGTGGCTCCTTCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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3UTR-3UTR GCA 90 bp | TGGAAACCTCCTCTGCCAGGATGGGACATGAGAGGGAAGGAGCCACTTAAGATAGTTGGTGTCCAGCTCTaGTGGCTCATCCTTTTCCCA | + |
Preference number: 2 (lower is better) Translates to: WKPPLPGWDMRGKEPLKIVGVQL*WLILFP Trigger: TGGGAAAAGGATGAGCCAGCAGAGCTGGACACCAAC...TATCTTAAGTGGCTCCTTCCCTCTCATGTCCCATCCTGGCAGAGGAGGTTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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3UTR-3UTR CCA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGACGTACACGCACGGATaGAGCAAGGCAGCAGAAAGA | + |
Preference number: 2 (lower is better) Translates to: SECLVPLFLLYLVSGLGQTYTHG*SKAAER Trigger: TCTTTCTGCTGCCTTGCTCCATCCGTGCGTGTACGT...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR CCA 90 bp | GAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTTAGATCCTCAGACCCACTaGGTGTGCTCCACTGTGTCT | + |
Preference number: 2 (lower is better) Translates to: ECLVPLFLLYLVSGLGQLDPQTH*VCSTVS Trigger: AGACACAGTGGAGCACACCCAGTGGGTCTGAGGATC...TAACTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR CCA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGCAATTCCTGCTGCAGTaGGTCCAGGCAACGGGGCAG | + |
Preference number: 2 (lower is better) Translates to: SYKPSSEPKQREVSSLSKQFLLQ*VQATGQ Trigger: CTGCCCCGTTGCCTGGACCCACTGCAGCAGGAATTG...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
||
3UTR-3UTR TCA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTCTTCCTCTTGGAGCTaGTCCTTAACCCCAGCCTTT | + |
Preference number: 2 (lower is better) Translates to: SECLVPLFLLYLVSGLGQSSSWS*SLTPAF Trigger: AAAGGCTGGGGTTAAGGATCAGCTCCAAGAGGAAGA...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR TCA 90 bp | ACGTCACATCTTGCTGCTCTTTATAAGGACTTGAATGCTGAAGGGTACCTGTGGTTGTCTGGAGGGCAGTaGTGGGAAGTGCCCAGAGAG | + |
Preference number: 2 (lower is better) Translates to: TSHLAALYKDLNAEGYLWLSGGQ*WEVPRE Trigger: CTCTCTGGGCACTTCCCATCACTGCCCTCCAGACAA...CCACAGGTACCCTTCAGCATTCAAGTCCTTATAAAGAGCAGCAAGATGTGACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
3UTR-3UTR GCA 90 bp | CATCCTCTAGGGCAGGGTAAGGACACAGCAGCTGATTTCTCTGGAGACTGGAGCTTCATGTCTAGAAACTaGTGGAAACCGAGGAAACAC | + |
Preference number: 2 (lower is better) Translates to: HPLGQGKDTAADFSGDWSFMSRN*WKPRKH Trigger: GTGTTTCCTCGGTTTCCAGCAGTTTCTAGACATGAA...GCTCCAGTCTCCAGAGAAATCAGCTGCTGTGTCCTTACCCTGCCCTAGAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
3UTR-3UTR GCA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGCAGACCCACTGGGTGTaGTCCACTGTGTCTGAGCAT | + |
Preference number: 2 (lower is better) Translates to: SYKPSSEPKQREVSSLSKQTHWV*STVSEH Trigger: ATGCTCAGACACAGTGGAGCACACCCAGTGGGTCTG...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR GCA 90 bp | CATCCTCTAGGGCAGGGTAAGGACACAGCAGCTGATTTCTCTGGAGACTGGAGCAGAAATGCAGATGTTTaGCAGACTACAGAGTCTGCA | + |
Preference number: 2 (lower is better) Translates to: HPLGQGKDTAADFSGDWSRNADV*QTTESA Trigger: TGCAGACTCTGTAGTCTGGCAAACATCTGCATTTCT...GCTCCAGTCTCCAGAGAAATCAGCTGCTGTGTCCTTACCCTGCCCTAGAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
3UTR-3UTR CCA 90 bp | TTTGGCTACCGTAGGGAGTGGATGGGAAGGGAAGAGACCCTAACTGACTGGCTTATGTCTAGAAACTGCTaGAAACCGAGGAAACACGTG | + |
Preference number: 2 (lower is better) Translates to: FGYRREWMGREETLTDWLMSRNC*KPRKHV Trigger: CACGTGTTTCCTCGGTTTCCAGCAGTTTCTAGACAT...AAGCCAGTCAGTTAGGGTCTCTTCCCTTCCCATCCACTCCCTACGGTAGCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
||
3UTR-3UTR CCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGGGGAGAGGGAGCACGTaGGAGAGAGGAGGACCACAC | + |
Preference number: 2 (lower is better) Translates to: RISDLMERTTEWNGRNIVGRGST*ERGGPH Trigger: GTGTGGTCCTCCTCTCTCCCACGTGCTCCCTCTCCC...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR CCA 90 bp | GCAGAACCTCTCAATCCTGTCTGTCCACCGCAAACTAACACGGCTGCAGTGCACGAGAGAACGACAGAATaGAATGGAAGGAACATAGTG | + |
Preference number: 2 (lower is better) Translates to: AEPLNPVCPPQTNTAAVHERTTE*NGRNIV Trigger: CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTC...GTGCACTGCAGCCGTGTTAGTTTGCGGTGGACAGACAGGATTGAGAGGTTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
||
3UTR-3UTR TCA 90 bp | CAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAGACAGTTCCTAGAAGAAATGGCATCATAAGAATGTaGTCCTCAGACCCACTGGGT | + |
Preference number: 2 (lower is better) Translates to: QPTSYHGHFSGKTVPRRNGIIRM*SSDPLG Trigger: ACCCAGTGGGTCTGAGGATCACATTCTTATGATGCC...ATTTCTTCTAGGAACTGTCTTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
3UTR-3UTR GCA 90 bp | ATAAGAGACCAACTATTCTTCATGTCTAGAAACTGCTGGAAACCGAGGAAACACACTGGCGGGACGCTATaGAGCCTGGAAGCTAGCTGG | + |
Preference number: 2 (lower is better) Translates to: IRDQLFFMSRNCWKPRKHTGGTL*SLEASW Trigger: CCAGCTAGCTTCCAGGCTGCATAGCGTCCCGCCAGT...GTGTTTCCTCGGTTTCCAGCAGTTTCTAGACATGAAGAATAGTTGGTCTCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR CCA 90 bp | CTGAACAAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGGGGAGAGGGAGCACGTaGGAGAGAGGAGGACCACAC | + |
Preference number: 2 (lower is better) Translates to: LNKEQLRISDLMERTTEWGRGST*ERGGPH Trigger: GTGTGGTCCTCCTCTCTCCCACGTGCTCCCTCTCCC...CCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTTGTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR CCA 90 bp | TTTGGCTACCGTAGGGAGTGGATGGGAAGGGAAGAGACCCTAACTGACTGGCTTTTAAATGTAAACCAGTaGGATTCATGTCCCGAGCAG | + |
Preference number: 2 (lower is better) Translates to: FGYRREWMGREETLTDWLLNVNQ*DSCPEQ Trigger: CTGCTCGGGACATGAATCCCACTGGTTTACATTTAA...AAGCCAGTCAGTTAGGGTCTCTTCCCTTCCCATCCACTCCCTACGGTAGCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGTCTTCCTCTTGGAGCTaGTCCTTAACCCCAGCCTTT | + |
Preference number: 2 (lower is better) Translates to: SYKPSSEPKQREVSSLSKSSSWS*SLTPAF Trigger: AAAGGCTGGGGTTAAGGATCAGCTCCAAGAGGAAGA...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR TCA 90 bp | GAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTTAACTAATTTACTTCAGTaGCTAAACCCTGAGCAGGCC | + |
Preference number: 2 (lower is better) Translates to: ECLVPLFLLYLVSGLGQLTNLLQ*LNPEQA Trigger: GGCCTGCTCAGGGTTTAGTCACTGAAGTAAATTAGT...TAACTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR GCA 90 bp | CAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAGACAGTTCCTAGAAGAAATAAGGTGTGTAAGCTCTaGACTGGAGTGATGCTGACA | + |
Preference number: 2 (lower is better) Translates to: QPTSYHGHFSGKTVPRRNKVCKL*TGVMLT Trigger: TGTCAGCATCACTCCAGTGCAGAGCTTACACACCTT...ATTTCTTCTAGGAACTGTCTTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
3UTR-3UTR GCA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGAGGATCCTAAATGCATaGTTGTCTGCCTGCTGGCTG | + |
Preference number: 2 (lower is better) Translates to: SYKPSSEPKQREVSSLSKRILNA*LSACWL Trigger: CAGCCAGCAGGCAGACAAGCATGCATTTAGGATCCT...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR-3UTR TCA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGGAGCACCGTGAGTTGTaGTGGAATCCCATTTCTATC | + |
Preference number: 2 (lower is better) Translates to: SYKPSSEPKQREVSSLSKEHREL*WNPISI Trigger: GATAGAAATGGGATTCCATCACAACTCACGGTGCTC...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGCAGACCCACTGGGTGTaGTCCACTGTGTCTGAGCAT | + |
Preference number: 2 (lower is better) Translates to: RISDLMERTTEWNGRNIVQTHWV*STVSEH Trigger: ATGCTCAGACACAGTGGAGCACACCCAGTGGGTCTG...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGATGCTTAGGACTCCCTaGATGTGGGAGAGGGAGCAC | + |
Preference number: 2 (lower is better) Translates to: RISDLMERTTEWNGRNIVMLRTP*MWEREH Trigger: GTGCTCCCTCTCCCACATGCAGGGAGTCCTAAGCAT...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGAAGGTGTGTAAGCTCTaGACTGGAGTGATGCTGACA | + |
Preference number: 2 (lower is better) Translates to: SYKPSSEPKQREVSSLSKKVCKL*TGVMLT Trigger: TGTCAGCATCACTCCAGTGCAGAGCTTACACACCTT...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAATGGAGGGCAGGGTTTaGAGGTCAGTCAGGATGACT | + |
Preference number: 2 (lower is better) Translates to: TKCLVSECLVPLFLLYLVMEGRV*RSVRMT Trigger: AGTCATCCTGACTGACCTGCAAACCCTGCCCTCCAT...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR CCA 90 bp | CCTCCTAGGGCTTTACAAGACCATCAAGAAATGAAACTCAAAGAAGAGCAAACAGGTCCACTTGTGTCCTaGCCAGCCCACTTCTTACCA | + |
Preference number: 2 (lower is better) Translates to: PPRALQDHQEMKLKEEQTGPLVS*PAHFLP Trigger: TGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACC...TGTTTGCTCTTCTTTGAGTTTCATTTCTTGATGGTCTTGTAAAGCCCTAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAGGCATCATAAGAATGTaGTCCTCAGACCCACTGGGT | + |
Preference number: 2 (lower is better) Translates to: TKCLVSECLVPLFLLYLVGIIRM*SSDPLG Trigger: ACCCAGTGGGTCTGAGGATCACATTCTTATGATGCC...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | CTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATACAGACCCACTGGGTGTaGTCCACTGTGTCTGAGCAT | + |
Preference number: 2 (lower is better) Translates to: LRISDLMERTTEWNGRNIQTHWV*STVSEH Trigger: ATGCTCAGACACAGTGGAGCACACCCAGTGGGTCTG...TATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | CTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAATGCTTAGGACTCCCTaGATGTGGGAGAGGGAGCAC | + |
Preference number: 2 (lower is better) Translates to: LRISDLMERTTEWNGRNIMLRTP*MWEREH Trigger: GTGCTCCCTCTCCCACATGCAGGGAGTCCTAAGCAT...TATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | ACGTCACATCTTGCTGCTCTTTATAAGGACTTGAATGCTGAAGGGTACCTGTGGTTGTTCCAGCAGCAATaGTTTCCCCAACACAAGTGT | + |
Preference number: 2 (lower is better) Translates to: TSHLAALYKDLNAEGYLWLFQQQ*FPQHKC Trigger: ACACTTGTGTTGGGGAAAGCATTGCTGCTGGAACAA...CCACAGGTACCCTTCAGCATTCAAGTCCTTATAAAGAGCAGCAAGATGTGACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | CTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGCATGCTTGTCTGCCTaGTGGCTGTTTTCAGGGAGC | + |
Preference number: 2 (lower is better) Translates to: LRISDLMERTTEWNGRNIACLSA*WLFSGS Trigger: GCTCCCTGAAAACAGCCAGCAGGCAGACAAGCATGC...TATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR-3UTR TCA 90 bp | TTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTCCAAACATCCCACTGTaGATTTATGCTACACTGCTG | + |
Preference number: 2 (lower is better) Translates to: FSIRMPGPSVPSVLGKWVPNIPL*IYATLL Trigger: CAGCAGTGTAGCATAAATTCACAGTGGGATGTTTGG...AACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | AGAAAGACAGCTATTAAAAATGGCAGTTTACTAGTCACGAGCTTGTTCCAGCAGTCTTCCTCTTGGAGCTaGTCCTTAACCCCAGCCTTT | + |
Preference number: 2 (lower is better) Translates to: RKTAIKNGSLLVTSLFQQSSSWS*SLTPAF Trigger: AAAGGCTGGGGTTAAGGATCAGCTCCAAGAGGAAGA...CTGCTGGAACAAGCTCGTGACTAGTAAACTGCCATTTTTAATAGCTGTCTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGACAGACCCACTGGGTGTaGTCCACTGTGTCTGAGCAT | + |
Preference number: 2 (lower is better) Translates to: KEQLRISDLMERTTEWNGQTHWV*STVSEH Trigger: ATGCTCAGACACAGTGGAGCACACCCAGTGGGTCTG...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR GCA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAAGGTGTGTAAGCTCTaGACTGGAGTGATGCTGACA | + |
Preference number: 2 (lower is better) Translates to: TKCLVSECLVPLFLLYLVKVCKL*TGVMLT Trigger: TGTCAGCATCACTCCAGTGCAGAGCTTACACACCTT...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | CTGAACAAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGATGGAGGGCAGGGTTTaGAGGTCAGTCAGGATGACT | + |
Preference number: 2 (lower is better) Translates to: LNKEQLRISDLMERTTEWMEGRV*RSVRMT Trigger: AGTCATCCTGACTGACCTGCAAACCCTGCCCTCCAT...CCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTTGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR CAA 90 bp | TTTAGAAAGACAGCTATTAAAAATGGCAGTTTACTAGTCACGAGCTaGTTCCAGCAGCAATGCTTTCCCCAACACAAGTGTTCCGTGAGG | + |
Preference number: 2 (lower is better) Translates to: FRKTAIKNGSLLVTS*FQQQCFPQHKCSVR Trigger: CCTCACGGAACACTTGTGTTGGGGAAAGCATTGCTGCTGGAACAAGCTCGTGACTAGTAAACTGCCATTTTTAATAGCTGTCTTTCTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
3UTR-3UTR TCA 90 bp | CTGAACAAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGGGCATCATAAGAATGTaGTCCTCAGACCCACTGGGT | + |
Preference number: 2 (lower is better) Translates to: LNKEQLRISDLMERTTEWGIIRM*SSDPLG Trigger: ACCCAGTGGGTCTGAGGATCACATTCTTATGATGCC...CCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTTGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR TCA 90 bp | TTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTTTTATGCTACACTGCTaGAAACAGTTAACGGCATCC | + |
Preference number: 2 (lower is better) Translates to: FSIRMPGPSVPSVLGKWVFMLHC*KQLTAS Trigger: GGATGCCGTTAACTGTTTTCAGCAGTGTAGCATAAA...AACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR TCA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTACCAAACATCCCACTGTaGATTTATGCTACACTGCTG | + |
Preference number: 2 (lower is better) Translates to: TKCLVSECLVPLFLLYLVPNIPL*IYATLL Trigger: CAGCAGTGTAGCATAAATTCACAGTGGGATGTTTGG...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR TCA 90 bp | CTGAACAAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGTCTTCCTCTTGGAGCTaGTCCTTAACCCCAGCCTTT | + |
Preference number: 2 (lower is better) Translates to: LNKEQLRISDLMERTTEWSSSWS*SLTPAF Trigger: AAAGGCTGGGGTTAAGGATCAGCTCCAAGAGGAAGA...CCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTTGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | AAGTCCCCTCCTAGGGCTTTACAAGACCATCAAGAAATGAAACTCAAAGAAGAGACTAATTTACTTCAGTaGCTAAACCCTGAGCAGGCC | + |
Preference number: 2 (lower is better) Translates to: KSPPRALQDHQEMKLKEETNLLQ*LNPEQA Trigger: GGCCTGCTCAGGGTTTAGTCACTGAAGTAAATTAGT...CTCTTCTTTGAGTTTCATTTCTTGATGGTCTTGTAAAGCCCTAGGAGGGGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | ACGTCACATCTTGCTGCTCTTTATAAGGACTTGAATGCTGAAGGGTACCTGTGGTCTCATAACCTTTTCTaGAGCAAAGGAGCCATTCTA | + |
Preference number: 2 (lower is better) Translates to: TSHLAALYKDLNAEGYLWSHNLF*SKGAIL Trigger: TAGAATGGCTCCTTTGCTTCAGAAAAGGTTATGAGA...CCACAGGTACCCTTCAGCATTCAAGTCCTTATAAAGAGCAGCAAGATGTGACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | TTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTTTCATGTCTAGAAACTaGTGGAAACCGAGGAAACAC | + |
Preference number: 2 (lower is better) Translates to: FSIRMPGPSVPSVLGKWVFMSRN*WKPRKH Trigger: GTGTTTCCTCGGTTTCCAGCAGTTTCTAGACATGAA...AACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR CCA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAATGTCTAGAAACTGCTaGAAACCGAGGAAACACGTG | + |
Preference number: 2 (lower is better) Translates to: TKCLVSECLVPLFLLYLVMSRNC*KPRKHV Trigger: CACGTGTTTCCTCGGTTTCCAGCAGTTTCTAGACAT...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | GAAATGAAACTCAAAGAAGAGCAAACAAGTTTGGAAAAGACCCTTGAGTCCAGTGAGCACCGTGAGTTGTaGTGGAATCCCATTTCTATC | + |
Preference number: 2 (lower is better) Translates to: EMKLKEEQTSLEKTLESSEHREL*WNPISI Trigger: GATAGAAATGGGATTCCATCACAACTCACGGTGCTC...ACTGGACTCAAGGGTCTTTTCCAAACTTGTTTGCTCTTCTTTGAGTTTCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | CTGAACAAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGGAGCACCGTGAGTTGTaGTGGAATCCCATTTCTATC | + |
Preference number: 2 (lower is better) Translates to: LNKEQLRISDLMERTTEWEHREL*WNPISI Trigger: GATAGAAATGGGATTCCATCACAACTCACGGTGCTC...CCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTTGTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAGGCATCATAAGAATGTaGTCCTCAGACCCACTGGGT | + |
Preference number: 2 (lower is better) Translates to: KEQLRISDLMERTTEWNGGIIRM*SSDPLG Trigger: ACCCAGTGGGTCTGAGGATCACATTCTTATGATGCC...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | CCTCCTAGGGCTTTACAAGACCATCAAGAAATGAAACTCAAAGAAGAGCAAACACCAAACATCCCACTGTaGATTTATGCTACACTGCTG | + |
Preference number: 2 (lower is better) Translates to: PPRALQDHQEMKLKEEQTPNIPL*IYATLL Trigger: CAGCAGTGTAGCATAAATTCACAGTGGGATGTTTGG...TGTTTGCTCTTCTTTGAGTTTCATTTCTTGATGGTCTTGTAAAGCCCTAGGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGCCAAACATCCCACTGTaGATTTATGCTACACTGCTG | + |
Preference number: 2 (lower is better) Translates to: RISDLMERTTEWNGRNIVPNIPL*IYATLL Trigger: CAGCAGTGTAGCATAAATTCACAGTGGGATGTTTGG...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | CCTCCTAGGGCTTTACAAGACCATCAAGAAATGAAACTCAAAGAAGAGCAAACAACTAATTTACTTCAGTaGCTAAACCCTGAGCAGGCC | + |
Preference number: 2 (lower is better) Translates to: PPRALQDHQEMKLKEEQTTNLLQ*LNPEQA Trigger: GGCCTGCTCAGGGTTTAGTCACTGAAGTAAATTAGT...TGTTTGCTCTTCTTTGAGTTTCATTTCTTGATGGTCTTGTAAAGCCCTAGGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGTTGTTCCAGCAGCAATaGTTTCCCCAACACAAGTGT | + |
Preference number: 2 (lower is better) Translates to: RISDLMERTTEWNGRNIVLFQQQ*FPQHKC Trigger: ACACTTGTGTTGGGGAAAGCATTGCTGCTGGAACAA...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAGAGCACCGTGAGTTGTaGTGGAATCCCATTTCTATC | + |
Preference number: 2 (lower is better) Translates to: KEQLRISDLMERTTEWNGEHREL*WNPISI Trigger: GATAGAAATGGGATTCCATCACAACTCACGGTGCTC...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGTTTATGCTACACTGCTaGAAACAGTTAACGGCATCC | + |
Preference number: 2 (lower is better) Translates to: RISDLMERTTEWNGRNIVFMLHC*KQLTAS Trigger: GGATGCCGTTAACTGTTTTCAGCAGTGTAGCATAAA...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAAATGCATGCTTGTCTaGCTGCTGGCTGTTTTCAGG | + |
Preference number: 2 (lower is better) Translates to: KEQLRISDLMERTTEWNGKCMLV*LLAVFR Trigger: CCTGAAAACAGCCAGCAGGCAGACAAGCATGCATTT...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR CAA 90 bp | GTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTTAGCTCAGTTTaGGGAAAAGCTATTTATATCTTCAAACAAACTGACTCAGGAGTT | + |
Preference number: 2 (lower is better) Translates to: VPSVLGKWVRPVSSV*GKAIYIFKQTDSGV Trigger: AACTCCTGAGTCAGTTTGTTTGAAGATATAAATAGCTTTTCCCAAAACTGAGCTAACTGGCCTAACCCACTTACCAAGTACAGAAGGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | CTGAACAAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGTTTATGCTACACTGCTaGAAACAGTTAACGGCATCC | + |
Preference number: 2 (lower is better) Translates to: LNKEQLRISDLMERTTEWFMLHC*KQLTAS Trigger: GGATGCCGTTAACTGTTTTCAGCAGTGTAGCATAAA...CCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTTGTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | AGAAAGACAGCTATTAAAAATGGCAGTTTACTAGTCACGAGCTTGTTCCAGCAGTCTCATAACCTTTTCTaGAGCAAAGGAGCCATTCTA | + |
Preference number: 2 (lower is better) Translates to: RKTAIKNGSLLVTSLFQQSHNLF*SKGAIL Trigger: TAGAATGGCTCCTTTGCTTCAGAAAAGGTTATGAGA...CTGCTGGAACAAGCTCGTGACTAGTAAACTGCCATTTTTAATAGCTGTCTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR GCA 90 bp | GAAATGAAACTCAAAGAAGAGCAAACAAGTTTGGAAAAGACCCTTGAGTCCAGTAGAAATGCAGATGTTTaGCAGACTACAGAGTCTGCA | + |
Preference number: 2 (lower is better) Translates to: EMKLKEEQTSLEKTLESSRNADV*QTTESA Trigger: TGCAGACTCTGTAGTCTGGCAAACATCTGCATTTCT...ACTGGACTCAAGGGTCTTTTCCAAACTTGTTTGCTCTTCTTTGAGTTTCATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR CCA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAATGTCTAGAAACTGCTaGAAACCGAGGAAACACGTG | + |
Preference number: 2 (lower is better) Translates to: KEQLRISDLMERTTEWNGMSRNC*KPRKHV Trigger: CACGTGTTTCCTCGGTTTCCAGCAGTTTCTAGACAT...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR CCA 90 bp | GAAATGAAACTCAAAGAAGAGCAAACAAGTTTGGAAAAGACCCTTGAGTCCAGTGAGAGAACGACAGAATaGAATGGAAGGAACATAGTG | + |
Preference number: 2 (lower is better) Translates to: EMKLKEEQTSLEKTLESSERTTE*NGRNIV Trigger: CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTC...ACTGGACTCAAGGGTCTTTTCCAAACTTGTTTGCTCTTCTTTGAGTTTCATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR CCA 90 bp | CTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGAGAGAACGACAGAATaGAATGGAAGGAACATAGTG | + |
Preference number: 2 (lower is better) Translates to: LRISDLMERTTEWNGRNIERTTE*NGRNIV Trigger: CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTC...TATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR TCA 90 bp | GAAATGAAACTCAAAGAAGAGCAAACAAGTTTGGAAAAGACCCTTGAGTCCAGTTCTCATAACCTTTTCTaGAGCAAAGGAGCCATTCTA | + |
Preference number: 2 (lower is better) Translates to: EMKLKEEQTSLEKTLESSSHNLF*SKGAIL Trigger: TAGAATGGCTCCTTTGCTTCAGAAAAGGTTATGAGA...ACTGGACTCAAGGGTCTTTTCCAAACTTGTTTGCTCTTCTTTGAGTTTCATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR GCA 72 bp | GCCTCTGAACGGCTTGAACTGGCTCCGCGATCCCTCTaGCATCTCGCCCGAGGCCTGACCCGGGTGTCCATC | + |
Preference number: 3 (lower is better) Translates to: ASERLELAPRSL*HLARGLTRVSI Trigger: GATGGACACCCGGGTCAGGCCTCGGGCGAGATGGCAGAGGGATCGCGGAGCCAGTTCAAGCCGTTCAGAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR TCA 72 bp | CGCCCGAGGCCTGACCCGGGTGTCCATCCCATACTCTaGAGCATGCGGTTCCCGATGTTGCTCTCTAGGATC | + |
Preference number: 3 (lower is better) Translates to: RPRPDPGVHPIL*SMRFPMLLSRI Trigger: GATCCTAGAGAGCAACATCGGGAACCGCATGCTTCAGAGTATGGGATGGACACCCGGGTCAGGCCTCGGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR GCA 72 bp | CTCAAACACAGGGTCGGGCAGGTTGGTGTCCAGCTCTaGTGGCTCATCCTTTTCCCACCAGGGCACGACTCC | + |
Preference number: 3 (lower is better) Translates to: LKHRVGQVGVQL*WLILFPPGHDS Trigger: GGAGTCGTGCCCTGGTGGGAAAAGGATGAGCCAGCAGAGCTGGACACCAACCTGCCCGACCCTGTGTTTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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3UTR CCA 72 bp | CAAGCCTTCCCGGACATGCTTAGGACTCCCTGCATGTaGGAGAGGGAGCACGTGGGAGAGAGGAGGACCACA | + |
Preference number: 3 (lower is better) Translates to: QAFPDMLRTPCM*EREHVGERRTT Trigger: TGTGGTCCTCCTCTCTCCCACGTGCTCCCTCTCCCACATGCAGGGAGTCCTAAGCATGTCCGGGAAGGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR CCA 72 bp | TCGGCTGGGCGTTCTCACCCACAATTCCTGCTGCAGTaGGTCCAGGCAACGGGGCAGCTTTCCTTCTCCTTT | + |
Preference number: 3 (lower is better) Translates to: SAGRSHPQFLLQ*VQATGQLSFSF Trigger: AAAGGAGAAGGAAAGCTGCCCCGTTGCCTGGACCCACTGCAGCAGGAATTGTGGGTGAGAACGCCCAGCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR-3UTR CAA 90 bp | GCAGAACCTCTCAATCCTGTCTGTCCACCGCAAACTAACACGGCTGCAGTGCACCAGCTCGTGAGGACCTaGCTGCAGAAGCTGCAGCAG | + |
Preference number: 3 (lower is better) Translates to: AEPLNPVCPPQTNTAAVHQLVRT*LQKLQQ Trigger: CTGCTGCAGCTTCTGCAGCAAGGTCCTCACGAGCTG...GTGCACTGCAGCCGTGTTAGTTTGCGGTGGACAGACAGGATTGAGAGGTTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR-3UTR CAA 90 bp | GAACTGGCTCCGCGATCCCTCTGCCATCTCGCCCGAGGCCTGACCCGGGTGTCCCTGGAAAAACAGCTTTaGGTCTTTTCCTCTTCACAA | + |
Preference number: 3 (lower is better) Translates to: ELAPRSLCHLARGLTRVSLEKQL*VFSSSQ Trigger: TTGTGAAGAGGAAAAGACCAAAAGCTGTTTTTCCAG...GGACACCCGGGTCAGGCCTCGGGCGAGATGGCAGAGGGATCGCGGAGCCAGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR GCA 72 bp | AGGGAAGTGAGCTCACTAAGCAAGCCTTCCCGGACATaGTTAGGACTCCCTGCATGTGGGAGAGGGAGCACG | + |
Preference number: 3 (lower is better) Translates to: REVSSLSKPSRT*LGLPACGRGST Trigger: CGTGCTCCCTCTCCCACATGCAGGGAGTCCTAAGCATGTCCGGGAAGGCTTGCTTAGTGAGCTCACTTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR TCA 72 bp | AGCTGCAGCAGAGGGTTCACATTGTCTGGAGGGCAGTaGTGGGAAGTGCCCAGAGAGAGCAGTTTTGGAGGC | + |
Preference number: 3 (lower is better) Translates to: SCSRGFTLSGGQ*WEVPRESSFGG Trigger: GCCTCCAAAACTGCTCTCTCTGGGCACTTCCCATCACTGCCCTCCAGACAATGTGAACCCTCTGCTGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR CCA 72 bp | ATCCCATTTCTATCACTGGCGGGACGCTATGCAGCCTaGAAGCTAGCTGGAGGCAACGTCAGAGGTCGGCTT | + |
Preference number: 3 (lower is better) Translates to: IPFLSLAGRYAA*KLAGGNVRGRL Trigger: AAGCCGACCTCTGACGTTGCCTCCAGCTAGCTTCCAGGCTGCATAGCGTCCCGCCAGTGATAGAAATGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR CAA 90 bp | TTTGGCTACCGTAGGGAGTGGATGGGAAGGGAAGAGACCCTAACTGACTGGCTTCCAGAGAGAGCAGTTTaGGAGGCCCAGTGCTCAGCA | + |
Preference number: 3 (lower is better) Translates to: FGYRREWMGREETLTDWLPERAV*EAQCSA Trigger: TGCTGAGCACTGGGCCTCCAAAACTGCTCTCTCTGG...AAGCCAGTCAGTTAGGGTCTCTTCCCTTCCCATCCACTCCCTACGGTAGCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR CCA 72 bp | CAGGGTAAGGACACAGCAGCTGATTTCTCTGGAGACTaGAGCCAAGCGTTCAGTGGCCTCACTGTTTCTCGC | + |
Preference number: 3 (lower is better) Translates to: QGKDTAADFSGD*SQAFSGLTVSR Trigger: GCGAGAAACAGTGAGGCCACTGAACGCTTGGCTCCAGTCTCCAGAGAAATCAGCTGCTGTGTCCTTACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR CCA 72 bp | AGGGAGTGGATGGGAAGGGAAGAGACCCTAACTGACTaGCTTGCAGAACAACAGGGTGGACTCATGAGGAAG | + |
Preference number: 3 (lower is better) Translates to: REWMGREETLTD*LAEQQGGLMRK Trigger: CTTCCTCATGAGTCCACCCTGTTGTTCTGCAAGCCAGTCAGTTAGGGTCTCTTCCCTTCCCATCCACTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR-3UTR CAA 90 bp | GAATGTGATCCTCAGACCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACCACTCTTCTTCCTCTaGGAGCTGATCCTTAACCCC | + |
Preference number: 3 (lower is better) Translates to: ECDPQTHWVCSTVSEHHVPLFFL*ELILNP Trigger: GGGGTTAAGGATCAGCTCCAAGAGGAAGAAGAGTGG...TACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGGTCTGAGGATCACATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR GCA 72 bp | GTCTGCATAATCATTGCAGCCAGTCCCAAACTGCTGTaGTCAAACACGGTGCCCAATTTCCAGGTAAGGGGC | + |
Preference number: 3 (lower is better) Translates to: VCIIIAASPKLL*SNTVPNFQVRG Trigger: GCCCCTTACCTGGAAATTGGGCACCGTGTTTGAGCACAGCAGTTTGGGACTGGCTGCAATGATTATGCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR CCA 72 bp | TTCTTCCTCTTGGAGCTGATCCTTAACCCCAGCCTTTaGGGAGAGGTAGACATATGGAGGGCAGGGTTTGCA | + |
Preference number: 3 (lower is better) Translates to: FFLLELILNPSL*GEVDIWRAGFA Trigger: TGCAAACCCTGCCCTCCATATGTCTACCTCTCCCCAAAGGCTGGGGTTAAGGATCAGCTCCAAGAGGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR CCA 72 bp | ACAGCTATGCTCCGATTCTTTGGCTACCGTAGGGAGTaGATGGGAAGGGAAGAGACCCTAACTGACTGGCTT | + |
Preference number: 3 (lower is better) Translates to: TAMLRFFGYRRE*MGREETLTDWL Trigger: AAGCCAGTCAGTTAGGGTCTCTTCCCTTCCCATCCACTCCCTACGGTAGCCAAAGAATCGGAGCATAGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR CCA 72 bp | CGACTGAGTCTAGCTTGGAAACCTCCTCTGCCAGGATaGGACATGAGAGGGAAGGAGCCACTTAAGATACTC | + |
Preference number: 3 (lower is better) Translates to: RLSLAWKPPLPG*DMRGKEPLKIL Trigger: GAGTATCTTAAGTGGCTCCTTCCCTCTCATGTCCCATCCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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3UTR-3UTR CAA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGCCACTCTTCTTCCTCTaGGAGCTGATCCTTAACCCC | + |
Preference number: 3 (lower is better) Translates to: SECLVPLFLLYLVSGLGQPLFFL*ELILNP Trigger: GGGGTTAAGGATCAGCTCCAAGAGGAAGAAGAGTGG...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR CAA 90 bp | GCAGAACCTCTCAATCCTGTCTGTCCACCGCAAACTAACACGGCTGCAGTGCACCAGGGACGTCACATCTaGCTGCTCTTTATAAGGACT | + |
Preference number: 3 (lower is better) Translates to: AEPLNPVCPPQTNTAAVHQGRHI*LLFIRT Trigger: AGTCCTTATAAAGAGCAGCAAGATGTGACGTCCCTG...GTGCACTGCAGCCGTGTTAGTTTGCGGTGGACAGACAGGATTGAGAGGTTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
||
3UTR TCA 72 bp | GAAGGGTTGAGGTTCGTACTTGAGCACCGTGAGTTGTaGTGGAATCCCATTTCTATCACTGGCGGGACGCTA | + |
Preference number: 3 (lower is better) Translates to: EGLRFVLEHREL*WNPISITGGTL Trigger: TAGCGTCCCGCCAGTGATAGAAATGGGATTCCATCACAACTCACGGTGCTCAAGTACGAACCTCAACCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR TCA 72 bp | AGGACCACACTACTTAGTGTCGGCATCATAAGAATGTaGTCCTCAGACCCACTGGGTGTGCTCCACTGTGTC | + |
Preference number: 3 (lower is better) Translates to: RTTLLSVGIIRM*SSDPLGVLHCV Trigger: GACACAGTGGAGCACACCCAGTGGGTCTGAGGATCACATTCTTATGATGCCGACACTAAGTAGTGTGGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR CAA 90 bp | CAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAGACAGTTCCTAGAAGAAATCCACTCTTCTTCCTCTaGGAGCTGATCCTTAACCCC | + |
Preference number: 3 (lower is better) Translates to: QPTSYHGHFSGKTVPRRNPLFFL*ELILNP Trigger: GGGGTTAAGGATCAGCTCCAAGAGGAAGAAGAGTGG...ATTTCTTCTAGGAACTGTCTTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
3UTR TCA 72 bp | AGAAACTGCTGGAAACCGAGGAAACACGTGAAGGGTTaGGGTTCGTACTTGAGCACCGTGAGTTGTGATGGA | + |
Preference number: 3 (lower is better) Translates to: RNCWKPRKHVKG*GSYLSTVSCDG Trigger: TCCATCACAACTCACGGTGCTCAAGTACGAACCTCAACCCTTCACGTGTTTCCTCGGTTTCCAGCAGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR GCA 72 bp | GGCAGTTTACTAGTCACGAGCTTGTTCCAGCAGCAATaGTTTCCCCAACACAAGTGTTCCGTGAGGCACAAA | + |
Preference number: 3 (lower is better) Translates to: GSLLVTSLFQQQ*FPQHKCSVRHK Trigger: TTTGTGCCTCACGGAACACTTGTGTTGGGGAAAGCATTGCTGCTGGAACAAGCTCGTGACTAGTAAACTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR GCA 72 bp | CCGCGTGCACACATACTCAAGCACGCATGTTTAACCTaGTGTCTCAACTCTGTCTGCATAATCATTGCAGCC | + |
Preference number: 3 (lower is better) Translates to: PRAHILKHACLT*CLNSVCIIIAA Trigger: GGCTGCAATGATTATGCAGACAGAGTTGAGACAGCAGGTTAAACATGCGTGCTTGAGTATGTGTGCACGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR GCA 72 bp | TCTCCTGTGCACAAGGATCCTAAATGCATGCTTGTCTaGCTGCTGGCTGTTTTCAGGGAGCAGCTTTTCTTG | + |
Preference number: 3 (lower is better) Translates to: SPVHKDPKCMLV*LLAVFREQLFL Trigger: CAAGAAAAGCTGCTCCCTGAAAACAGCCAGCAGGCAGACAAGCATGCATTTAGGATCCTTGTGCACAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
||
3UTR CCA 72 bp | GGACTTACGGCAGTCCTGCCTCAATCTTCCAACTTCTaGGTGGGTGTTAGCATAGCTGCCCACTTTAAAAGT | + |
Preference number: 3 (lower is better) Translates to: GLTAVLPQSSNF*VGVSIAAHFKS Trigger: ACTTTTAAAGTGGGCAGCTATGCTAACACCCACCCAGAAGTTGGAAGATTGAGGCAGGACTGCCGTAAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
||
3UTR-3UTR CAA 90 bp | GGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGAAACCAGTTAGCTCAGTTTaGGGAAAAGCTATTTATATC | + |
Preference number: 3 (lower is better) Translates to: GPLVSWPAHFLPRPLLRKPVSSV*GKAIYI Trigger: GATATAAATAGCTTTTCCCAAAACTGAGCTAACTGG...TTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
3UTR-3UTR CAA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGACAAACGGGGTCCACTaGTGTCCTGGCCAGCCCACT | + |
Preference number: 3 (lower is better) Translates to: RISDLMERTTEWNGRNIVTNGVH*CPGQPT Trigger: AGTGGGCTGGCCAGGACACAAGTGGACCCCGTTTGT...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
3UTR-3UTR CAA 90 bp | TTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTCCACTCTTCTTCCTCTaGGAGCTGATCCTTAACCCC | + |
Preference number: 3 (lower is better) Translates to: FSIRMPGPSVPSVLGKWVPLFFL*ELILNP Trigger: GGGGTTAAGGATCAGCTCCAAGAGGAAGAAGAGTGG...AACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
3UTR-3UTR CAA 90 bp | TTTGGCTACCGTAGGGAGTGGATGGGAAGGGAAGAGACCCTAACTGACTGGCTTGAAGTTCATACTGCTTaGTTCAAGCATACACTAGTA | + |
Preference number: 3 (lower is better) Translates to: FGYRREWMGREETLTDWLEVHTA*FKHTLV Trigger: TACTAGTGTATGCTTGAACAAAGCAGTATGAACTTC...AAGCCAGTCAGTTAGGGTCTCTTCCCTTCCCATCCACTCCCTACGGTAGCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
||
3UTR GCA 72 bp | TTTAACCTGCTGTCTCAACTCTGTCTGCATAATCATTaGAGCCAGTCCCAAACTGCTGTGCTCAAACACGGT | + |
Preference number: 3 (lower is better) Translates to: FNLLSQLCLHNH*SQSQTAVLKHG Trigger: ACCGTGTTTGAGCACAGCAGTTTGGGACTGGCTGCAATGATTATGCAGACAGAGTTGAGACAGCAGGTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
||
3UTR-3UTR CAA 90 bp | ACGTCACATCTTGCTGCTCTTTATAAGGACTTGAATGCTGAAGGGTACCTGTGGGAAGAGCAAACAAGTTaGGAAAAGACCCTTGAGTCC | + |
Preference number: 3 (lower is better) Translates to: TSHLAALYKDLNAEGYLWEEQTS*EKTLES Trigger: GGACTCAAGGGTCTTTTCCAAACTTGTTTGCTCTTC...CCACAGGTACCCTTCAGCATTCAAGTCCTTATAAAGAGCAGCAAGATGTGACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
3UTR-3UTR CAA 90 bp | CTGAACAAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAGGGAGCAGCTTTTCTaGTGTCCTCTTTCCGCTCGG | + |
Preference number: 3 (lower is better) Translates to: LNKEQLRISDLMERTTEWREQLF*CPLSAR Trigger: CCGAGCGGAAAGAGGACACAAGAAAAGCTGCTCCCT...CCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTTGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
||
3UTR-3UTR CAA 90 bp | GAAATGAAACTCAAAGAAGAGCAAACAAGTTTGGAAAAGACCCTTGAGTCCAGTCCACTCTTCTTCCTCTaGGAGCTGATCCTTAACCCC | + |
Preference number: 3 (lower is better) Translates to: EMKLKEEQTSLEKTLESSPLFFL*ELILNP Trigger: GGGGTTAAGGATCAGCTCCAAGAGGAAGAAGAGTGG...ACTGGACTCAAGGGTCTTTTCCAAACTTGTTTGCTCTTCTTTGAGTTTCATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
3UTR TCA 72 bp | ACTCAAAGAAGAGCAAACAAGTTTGGAAAAGACCCTTaGGTCCAGTACACGGTTAGTCTCTTCGATCTTCCC | + |
Preference number: 3 (lower is better) Translates to: TQRRANKFGKDP*VQYTVSLFDLP Trigger: GGGAAGATCGAAGAGACTAACCGTGTACTGGACTCAAGGGTCTTTTCCAAACTTGTTTGCTCTTCTTTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
3UTR GCA 72 bp | CCTTTGGGGAGAGGTAGACATATGGAGGGCAGGGTTTaGAGGTCAGTCAGGATGACTTTAAAAATACATTTT | + |
Preference number: 3 (lower is better) Translates to: PLGRGRHMEGRV*RSVRMTLKIHF Trigger: AAAATGTATTTTTAAAGTCATCCTGACTGACCTGCAAACCCTGCCCTCCATATGTCTACCTCTCCCCAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR CCA 72 bp | GGTGCCCAATTTCCAGGTAAGGGGCACTTACTAACGTaGTTTCCATTGATATTTACTTTTGACACGGGTATC | + |
Preference number: 3 (lower is better) Translates to: GAQFPGKGHLLT*FPLIFTFDTGI Trigger: GATACCCGTGTCAAAAGTAAATATCAATGGAAACCACGTTAGTAAGTGCCCCTTACCTGGAAATTGGGCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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3UTR-3UTR CAA 90 bp | CAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAGACAGTTCCTAGAAGAAATGAAGTTCATACTGCTTaGTTCAAGCATACACTAGTA | + |
Preference number: 3 (lower is better) Translates to: QPTSYHGHFSGKTVPRRNEVHTA*FKHTLV Trigger: TACTAGTGTATGCTTGAACAAAGCAGTATGAACTTC...ATTTCTTCTAGGAACTGTCTTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR CAA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGCCAGTGGCCAGTAAATaGTTTCCTAAAAGGATTAAC | + |
Preference number: 3 (lower is better) Translates to: SYKPSSEPKQREVSSLSKPVASK*FPKRIN Trigger: GTTAATCCTTTTAGGAAACAATTTACTGGCCACTGG...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR-3UTR CAA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGCCAGTTAGCTCAGTTTaGGGAAAAGCTATTTATATC | + |
Preference number: 3 (lower is better) Translates to: SYKPSSEPKQREVSSLSKPVSSV*GKAIYI Trigger: GATATAAATAGCTTTTCCCAAAACTGAGCTAACTGG...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR CAA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGATGGTGGGGGAGCTTTTaGGTAGAGGAAATCCAAGTC | + |
Preference number: 3 (lower is better) Translates to: KEQLRISDLMERTTEWNGWWGSF*VEEIQV Trigger: GACTTGGATTTCCTCTACCAAAAAGCTCCCCCACCA...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
||
3UTR TCA 72 bp | AACAAACTGACTCAGGAGTTTACTAATTTACTTCAGTaGCTAAACCCTGAGCAGGCCACTCTTCTTCCTCTT | + |
Preference number: 3 (lower is better) Translates to: NKLTQEFTNLLQ*LNPEQATLLPL Trigger: AAGAGGAAGAAGAGTGGCCTGCTCAGGGTTTAGTCACTGAAGTAAATTAGTAAACTCCTGAGTCAGTTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR CCA 72 bp | ACATTTCCTATTTTAATTGTGTTTACTTCTCAGCTATaGTCAGGTATGCCAGGGACGTCACATCTTGCTGCT | + |
Preference number: 3 (lower is better) Translates to: TFPILIVFTSQL*SGMPGTSHLAA Trigger: AGCAGCAAGATGTGACGTCCCTGGCATACCTGACCATAGCTGAGAAGTAAACACAATTAAAATAGGAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR-3UTR CAA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGCCAGTTAGCTCAGTTTaGGGAAAAGCTATTTATATC | + |
Preference number: 3 (lower is better) Translates to: RISDLMERTTEWNGRNIVPVSSV*GKAIYI Trigger: GATATAAATAGCTTTTCCCAAAACTGAGCTAACTGG...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR-3UTR CAA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGACCAGTTAGCTCAGTTTaGGGAAAAGCTATTTATATC | + |
Preference number: 3 (lower is better) Translates to: KEQLRISDLMERTTEWNGPVSSV*GKAIYI Trigger: GATATAAATAGCTTTTCCCAAAACTGAGCTAACTGG...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR CCA 72 bp | CTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATaGAATGGAAGGAACATAGTGTTTCGCTTAATTTTA | + |
Preference number: 3 (lower is better) Translates to: LRISDLMERTTE*NGRNIVFRLIL Trigger: TAAAATTAAGCGAAACACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR TCA 90 bp | GAACTGGCTCCGCGATCCCTCTGCCATCTCGCCCGAGGCCTGACCCGGGTGTCCCTTCCATTGTTCGACTaGAATGCCAGCTCTTCCCGG | + |
Preference number: 4 (lower is better) Translates to: ELAPRSLCHLARGLTRVSLPLFD*NASSSR Trigger: CCGGGAAGAGCTGGCATTTCAGTCGAACAATGGAAG...GGACACCCGGGTCAGGCCTCGGGCGAGATGGCAGAGGGATCGCGGAGCCAGTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | CCTTTTCCCACCAGGGCACGACTCCAGCAATCCCGCACGCTCCGCCTGACTCCTTTGCTGGAGACGTCCTaGGGGAGATCCACGGCCATG | + |
Preference number: 4 (lower is better) Translates to: PFPTRARLQQSRTLRLTPLLETS*GRSTAM Trigger: CATGGCCGTGGATCTCCCGCAGGACGTCTCCAGCAA...AGGAGTCAGGCGGAGCGTGCGGGATTGCTGGAGTCGTGCCCTGGTGGGAAAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR GCA 90 bp | GAACTGGCTCCGCGATCCCTCTGCCATCTCGCCCGAGGCCTGACCCGGGTGTCCGTTGGTGTCCAGCTCTaGTGGCTCATCCTTTTCCCA | + |
Preference number: 4 (lower is better) Translates to: ELAPRSLCHLARGLTRVSVGVQL*WLILFP Trigger: TGGGAAAAGGATGAGCCAGCAGAGCTGGACACCAAC...GGACACCCGGGTCAGGCCTCGGGCGAGATGGCAGAGGGATCGCGGAGCCAGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | CGGGGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGGGAGATCCACGGCCATaGGCTTCACCTTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: RGPLVSWPAHFLPRPLLRGDPRP*ASPSSS Trigger: GGAGGAGGAAGGTGAAGCGCATGGCCGTGGATCTCC...CCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR GCA 90 bp | CGGGGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGTTGCTGGAGACGTCCTaGGGGAGATCCACGGCCATG | + |
Preference number: 4 (lower is better) Translates to: RGPLVSWPAHFLPRPLLRLLETS*GRSTAM Trigger: CATGGCCGTGGATCTCCCGCAGGACGTCTCCAGCAA...CCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CCA 90 bp | GAACTGGCTCCGCGATCCCTCTGCCATCTCGCCCGAGGCCTGACCCGGGTGTCCCTTCCGGGTAAACTCTaGATACTGGCTGGCTCTATC | + |
Preference number: 4 (lower is better) Translates to: ELAPRSLCHLARGLTRVSLPGKL*ILAGSI Trigger: GATAGAGCCAGCCAGTATCCAGAGTTTACCCGGAAG...GGACACCCGGGTCAGGCCTCGGGCGAGATGGCAGAGGGATCGCGGAGCCAGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCCAGGGTCGGGCAGGTTaGTGTCCAGCTCTGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: PTGCAPLCLSITYTHGWSQGRAG*CPALLA Trigger: AGCCAGCAGAGCTGGACACCAACCTGCCCGACCCTG...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | ACACAGGGTCGGGCAGGTTGGTGTCCAGCTCTGCTGGCTCATCCTTTTCCCACCGGAGATCCACGGCCATaGGCTTCACCTTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: TQGRAGWCPALLAHPFPTGDPRP*ASPSSS Trigger: GGAGGAGGAAGGTGAAGCGCATGGCCGTGGATCTCC...GGTGGGAAAAGGATGAGCCAGCAGAGCTGGACACCAACCTGCCCGACCCTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR GCA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCGGAGATCCACGGCCATaGGCTTCACCTTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: PTGCAPLCLSITYTHGWSGDPRP*ASPSSS Trigger: GGAGGAGGAAGGTGAAGCGCATGGCCGTGGATCTCC...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCCAATTCCTGCTGCAGTaGGTCCAGGCAACGGGGCAG | + |
Preference number: 4 (lower is better) Translates to: PTGCAPLCLSITYTHGWSQFLLQ*VQATGQ Trigger: CTGCCCCGTTGCCTGGACCCACTGCAGCAGGAATTG...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR GCA 90 bp | TGCTGGCTCATCCTTTTCCCACCAGGGCACGACTCCAGCAATCCCGCACGCTCCGGGTCATTGTCCTTTTaGTGGAGACGTCCTGCGGGA | + |
Preference number: 4 (lower is better) Translates to: CWLILFPPGHDSSNPARSGSLSF*WRRPAG Trigger: TCCCGCAGGACGTCTCCAGCAAAAGGACAATGACCC...GGAGCGTGCGGGATTGCTGGAGTCGTGCCCTGGTGGGAAAAGGATGAGCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR CCA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCCTCCTTTTCCGGGCCTaGCGTTTCAGAGGGCAAGAC | + |
Preference number: 4 (lower is better) Translates to: PTGCAPLCLSITYTHGWSLLFRA*RFRGQD Trigger: GTCTTGCCCTCTGAAACGCCAGGCCCGGAAAAGGAG...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | CCTGCATCAAAGAGGCTCACACTTCAGTGTGTCCCTCCCGGGAAGAGGACAGGACAGGGTCGGGCAGGTTaGTGTCCAGCTCTGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: PASKRLTLQCVPPGKRTGQGRAG*CPALLA Trigger: AGCCAGCAGAGCTGGACACCAACCTGCCCGACCCTG...TCCTGTCCTCTTCCCGGGAGGGACACACTGAAGTGTGAGCCTCTTTGATGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR GCA 90 bp | CTCTGCTGGCTCATCCTTTTCCCACCAGGGCACGACTCCAGCAATCCCGCACGCAATCCACCTCGGGCTTaGTCAGAGCTCTCTTCCAGT | + |
Preference number: 4 (lower is better) Translates to: LCWLILFPPGHDSSNPARNPPRA*SELSSS Trigger: ACTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATT...GCGTGCGGGATTGCTGGAGTCGTGCCCTGGTGGGAAAAGGATGAGCCAGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR GCA 90 bp | CCTGCATCAAAGAGGCTCACACTTCAGTGTGTCCCTCCCGGGAAGAGGACAGGATTGCTGGAGACGTCCTaGGGGAGATCCACGGCCATG | + |
Preference number: 4 (lower is better) Translates to: PASKRLTLQCVPPGKRTGLLETS*GRSTAM Trigger: CATGGCCGTGGATCTCCCGCAGGACGTCTCCAGCAA...TCCTGTCCTCTTCCCGGGAGGGACACACTGAAGTGTGAGCCTCTTTGATGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR GCA 90 bp | CCCAGGGTCAACCTACATCCCAGGGAATCCTCCCAGTCAGTTTCACTTGAGGCTGGAGATCCACGGCCATaGGCTTCACCTTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: PRVNLHPRESSQSVSLEAGDPRP*ASPSSS Trigger: GGAGGAGGAAGGTGAAGCGCATGGCCGTGGATCTCC...AGCCTCAAGTGAAACTGACTGGGAGGATTCCCTGGGATGTAGGTTGACCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR GCA 90 bp | CGGGGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGAGGATCCTAAATGCATaGTTGTCTGCCTGCTGGCTG | + |
Preference number: 4 (lower is better) Translates to: RGPLVSWPAHFLPRPLLRRILNA*LSACWL Trigger: CAGCCAGCAGGCAGACAAGCATGCATTTAGGATCCT...CCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CCA 90 bp | GAGTCTAGCTTGGAAACCTCCTCTGCCAGGATGGGACATGAGAGGGAAGGAGCCCTCCTTTTCCGGGCCTaGCGTTTCAGAGGGCAAGAC | + |
Preference number: 4 (lower is better) Translates to: ESSLETSSARMGHEREGALLFRA*RFRGQD Trigger: GTCTTGCCCTCTGAAACGCCAGGCCCGGAAAAGGAG...GGCTCCTTCCCTCTCATGTCCCATCCTGGCAGAGGAGGTTTCCAAGCTAGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR CCA 90 bp | CAACAGAAACCGCAGGTTCTCTCTCTGCTCAGGCAGGGTTTCCTGATGTGGGGGCTCCTTTTCCGGGCCTaGCGTTTCAGAGGGCAAGAC | + |
Preference number: 4 (lower is better) Translates to: QQKPQVLSLLRQGFLMWGLLFRA*RFRGQD Trigger: GTCTTGCCCTCTGAAACGCCAGGCCCGGAAAAGGAG...CCCCCACATCAGGAAACCCTGCCTGAGCAGAGAGAGAACCTGCGGTTTCTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | CGGGGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGTTCGCCACTAACATCTaGTCATCAGAGTCACTGCGG | + |
Preference number: 4 (lower is better) Translates to: RGPLVSWPAHFLPRPLLRFATNI*SSESLR Trigger: CCGCAGTGACTCTGATGACCAGATGTTAGTGGCGAA...CCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CCA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCATCTCTGCAGCCTTCTaGCAGCTGGGTCATTGTCCT | + |
Preference number: 4 (lower is better) Translates to: PTGCAPLCLSITYTHGWSISAAF*QLGHCP Trigger: AGGACAATGACCCAGCTGCCAGAAGGCTGCAGAGAT...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | CGGGGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGCTTCCGGGTAAACTCTaGATACTGGCTGGCTCTATC | + |
Preference number: 4 (lower is better) Translates to: RGPLVSWPAHFLPRPLLRLPGKL*ILAGSI Trigger: GATAGAGCCAGCCAGTATCCAGAGTTTACCCGGAAG...CCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR GCA 90 bp | CATCCTTTTCCCACCAGGGCACGACTCCAGCAATCCCGCACGCTCCGCCTGACTAGAGCTCTCTTCCAGTaGAGAGACAAGATCGTGAAC | + |
Preference number: 4 (lower is better) Translates to: HPFPTRARLQQSRTLRLTRALFQ*RDKIVN Trigger: GTTCACGATCTTGTCTCTGCACTGGAAGAGAGCTCT...AGTCAGGCGGAGCGTGCGGGATTGCTGGAGTCGTGCCCTGGTGGGAAAAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR GCA 90 bp | ACACTTCAGTGTGTCCCTCCCGGGAAGAGGACAGGAGCCAGGTTCCTTCGAATGGGGTCATTGTCCTTTTaGTGGAGACGTCCTGCGGGA | + |
Preference number: 4 (lower is better) Translates to: TLQCVPPGKRTGARFLRMGSLSF*WRRPAG Trigger: TCCCGCAGGACGTCTCCAGCAAAAGGACAATGACCC...CATTCGAAGGAACCTGGCTCCTGTCCTCTTCCCGGGAGGGACACACTGAAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR GCA 90 bp | GGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAGGGTCATTGTCCTTTTaGTGGAGACGTCCTGCGGGA | + |
Preference number: 4 (lower is better) Translates to: GPLVSWPAHFLPRPLLRKGSLSF*WRRPAG Trigger: TCCCGCAGGACGTCTCCAGCAAAAGGACAATGACCC...TTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CCA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCCTTCCGGGTAAACTCTaGATACTGGCTGGCTCTATC | + |
Preference number: 4 (lower is better) Translates to: PTGCAPLCLSITYTHGWSLPGKL*ILAGSI Trigger: GATAGAGCCAGCCAGTATCCAGAGTTTACCCGGAAG...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCCCATCCTGTCCTTGTTaGGCTGGCTTCTTTCTTCAC | + |
Preference number: 4 (lower is better) Translates to: PTGCAPLCLSITYTHGWSPSCPC*AGFFLH Trigger: GTGAAGAAAGAAGCCAGCCCAACAAGGACAGGATGG...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | CACTTCAGTGTGTCCCTCCCGGGAAGAGGACAGGAGCCAGGTTCCTTCGAATGTAATCCACCTCGGGCTTaGTCAGAGCTCTCTTCCAGT | + |
Preference number: 4 (lower is better) Translates to: HFSVSLPGRGQEPGSFECNPPRA*SELSSS Trigger: ACTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATT...ACATTCGAAGGAACCTGGCTCCTGTCCTCTTCCCGGGAGGGACACACTGAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR GCA 90 bp | GGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAAATCCACCTCGGGCTTaGTCAGAGCTCTCTTCCAGT | + |
Preference number: 4 (lower is better) Translates to: GPLVSWPAHFLPRPLLRKNPPRA*SELSSS Trigger: ACTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATT...TTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR GCA 90 bp | GCAGAACCTCTCAATCCTGTCTGTCCACCGCAAACTAACACGGCTGCAGTGCACGCATGCTTGTCTGCCTaGTGGCTGTTTTCAGGGAGC | + |
Preference number: 4 (lower is better) Translates to: AEPLNPVCPPQTNTAAVHACLSA*WLFSGS Trigger: GCTCCCTGAAAACAGCCAGCAGGCAGACAAGCATGC...GTGCACTGCAGCCGTGTTAGTTTGCGGTGGACAGACAGGATTGAGAGGTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065573.14 ENSMUST00000160570.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAATCCTCCCAGTCAGTTTCACTTGAGGCTAAAAGAGAGACCACCACCCCTTCACTTAAGCAGTaGCCTGTCTCCCACGGGTGG | + |
Preference number: 4 (lower is better) Translates to: PRESSQSVSLEAKRETTTPSLKQ*PVSHGW Trigger: CCACCCGTGGGAGACAGGCCACTGCTTAAGTGAAGG...GGTGGTGGTCTCTCTTTTAGCCTCAAGTGAAACTGACTGGGAGGATTCCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CCA 90 bp | AGCCACTTAAGATACTCTCAAACACAGGGTCGGGCAGGTTGGTGTCCAGCTCTGCCTTCACTTAAGCAGTaGCCTGTCTCCCACGGGTGG | + |
Preference number: 4 (lower is better) Translates to: SHLRYSQTQGRAGWCPALPSLKQ*PVSHGW Trigger: CCACCCGTGGGAGACAGGCCACTGCTTAAGTGAAGG...CAGAGCTGGACACCAACCTGCCCGACCCTGTGTTTGAGAGTATCTTAAGTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR CCA 90 bp | TTCAGTGTGTCCCTCCCGGGAAGAGGACAGGAGCCAGGTTCCTTCGAATGTCATACTCCTCCTTCCTCCTaGGTTTTCGGTCCTGGCCTA | + |
Preference number: 4 (lower is better) Translates to: FSVSLPGRGQEPGSFECHTPPSS*VFGPGL Trigger: TAGGCCAGGACCGAAAACCCAGGAGGAAGGAGGAGT...ATGACATTCGAAGGAACCTGGCTCCTGTCCTCTTCCCGGGAGGGACACACTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CCA 90 bp | CCGGGAAGAGGACAGGAGCCAGGTTCCTTCGAATGTCATTCCCCAGGTGTTCAAGGTGTCCAGCTCTGCTaGCTCATCCTTTTCCCACCA | + |
Preference number: 4 (lower is better) Translates to: PGRGQEPGSFECHSPGVQGVQLC*LILFPP Trigger: TGGTGGGAAAAGGATGAGCCAGCAGAGCTGGACACC...TTGAACACCTGGGGAATGACATTCGAAGGAACCTGGCTCCTGTCCTCTTCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CCA 90 bp | GAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTTACAGGGTCGGGCAGGTTaGTGTCCAGCTCTGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: ECLVPLFLLYLVSGLGQLQGRAG*CPALLA Trigger: AGCCAGCAGAGCTGGACACCAACCTGCCCGACCCTG...TAACTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | CACTTCAGTGTGTCCCTCCCGGGAAGAGGACAGGAGCCAGGTTCCTTCGAATGTCGACTGAGTCTAGCTTaGAAACCTCCTCTGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: HFSVSLPGRGQEPGSFECRLSLA*KPPLPG Trigger: TCCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCG...ACATTCGAAGGAACCTGGCTCCTGTCCTCTTCCCGGGAGGGACACACTGAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CCA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGCAATTCCTGCTGCAGTaGGTCCAGGCAACGGGGCAG | + |
Preference number: 4 (lower is better) Translates to: SECLVPLFLLYLVSGLGQQFLLQ*VQATGQ Trigger: CTGCCCCGTTGCCTGGACCCACTGCAGCAGGAATTG...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR TCA 90 bp | AAACCTCCTCTGCCAGGATGGGACATGAGAGGGAAGGAGCCACTTAAGATACTCCCGCGTCAGTGCTGCTaGGACTGCTGGTGTCACTTT | + |
Preference number: 4 (lower is better) Translates to: KPPLPGWDMRGKEPLKILPRQCC*DCWCHF Trigger: AAAGTGACACCAGCAGTCTCAGCAGCACTGACGCGG...GAGTATCTTAAGTGGCTCCTTCCCTCTCATGTCCCATCCTGGCAGAGGAGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR TCA 90 bp | CACTTCAGTGTGTCCCTCCCGGGAAGAGGACAGGAGCCAGGTTCCTTCGAATGTTTTGAAGGCGTTCCATaGAGGCGACTGAGTCTAGCT | + |
Preference number: 4 (lower is better) Translates to: HFSVSLPGRGQEPGSFECFEGVP*RRLSLA Trigger: AGCTAGACTCAGTCGCCTTCATGGAACGCCTTCAAA...ACATTCGAAGGAACCTGGCTCCTGTCCTCTTCCCGGGAGGGACACACTGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR GCA 90 bp | TCTCTAGGATCGGCTGGGCGTTCTCACCCACAATTCCTGCTGCAGTGGGTCCAGAGAGCTCTCTTCCAGTaGAGAGACAAGATCGTGAAC | + |
Preference number: 4 (lower is better) Translates to: SLGSAGRSHPQFLLQWVQRALFQ*RDKIVN Trigger: GTTCACGATCTTGTCTCTGCACTGGAAGAGAGCTCT...CTGGACCCACTGCAGCAGGAATTGTGGGTGAGAACGCCCAGCCGATCCTAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | GAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTTATTGCTGGAGACGTCCTaGGGGAGATCCACGGCCATG | + |
Preference number: 4 (lower is better) Translates to: ECLVPLFLLYLVSGLGQLLLETS*GRSTAM Trigger: CATGGCCGTGGATCTCCCGCAGGACGTCTCCAGCAA...TAACTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | TTTGGCTACCGTAGGGAGTGGATGGGAAGGGAAGAGACCCTAACTGACTGGCTTCCATCCTCTTGTTACTaGCAGGGCCAGGAGCAGACA | + |
Preference number: 4 (lower is better) Translates to: FGYRREWMGREETLTDWLPSSCY*QGQEQT Trigger: TGTCTGCTCCTGGCCCTGGCAGTAACAAGAGGATGG...AAGCCAGTCAGTTAGGGTCTCTTCCCTTCCCATCCACTCCCTACGGTAGCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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CDS-3UTR CCA 90 bp | GAATGTGATCCTCAGACCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTAACTCCTCCTTCCTCCTaGGTTTTCGGTCCTGGCCTA | + |
Preference number: 4 (lower is better) Translates to: ECDPQTHWVCSTVSEHHVTPPSS*VFGPGL Trigger: TAGGCCAGGACCGAAAACCCAGGAGGAAGGAGGAGT...TACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGGTCTGAGGATCACATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | AGCCACTTAAGATACTCTCAAACACAGGGTCGGGCAGGTTGGTGTCCAGCTCTGACTCCTCCTTCCTCCTaGGTTTTCGGTCCTGGCCTA | + |
Preference number: 4 (lower is better) Translates to: SHLRYSQTQGRAGWCPALTPPSS*VFGPGL Trigger: TAGGCCAGGACCGAAAACCCAGGAGGAAGGAGGAGT...CAGAGCTGGACACCAACCTGCCCGACCCTGTGTTTGAGAGTATCTTAAGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR CCA 90 bp | CAACAGAAACCGCAGGTTCTCTCTCTGCTCAGGCAGGGTTTCCTGATGTGGGGGCTGTCCTTGTTGGGCTaGCTTCTTTCTTCACTCTCC | + |
Preference number: 4 (lower is better) Translates to: QQKPQVLSLLRQGFLMWGLSLLG*LLSSLS Trigger: GGAGAGTGAAGAAAGAAGCCAGCCCAACAAGGACAG...CCCCCACATCAGGAAACCCTGCCTGAGCAGAGAGAGAACCTGCGGTTTCTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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3UTR CAA 72 bp | GGAGTCACACTGCTGACACAGCTATGCTCCGATTCTTaGGCTACCGTAGGGAGTGGATGGGAAGGGAAGAGA | + |
Preference number: 4 (lower is better) Translates to: GVTLLTQLCSDS*ATVGSGWEGKR Trigger: TCTCTTCCCTTCCCATCCACTCCCTACGGTAGCCAAAGAATCGGAGCATAGCTGTGTCAGCAGTGTGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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CDS-3UTR TCA 90 bp | TCCATGAAGGCGACTGAGTCTAGCTTGGAAACCTCCTCTGCCAGGATGGGACATCTTCCATTGTTCGACTaGAATGCCAGCTCTTCCCGG | + |
Preference number: 4 (lower is better) Translates to: SMKATESSLETSSARMGHLPLFD*NASSSR Trigger: CCGGGAAGAGCTGGCATTTCAGTCGAACAATGGAAG...ATGTCCCATCCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCGCCTTCATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR GCA 90 bp | CCCAGGGAATCCTCCCAGTCAGTTTCACTTGAGGCTAAAAGAGAGACCACCACCGTTGGTGTCCAGCTCTaGTGGCTCATCCTTTTCCCA | + |
Preference number: 4 (lower is better) Translates to: PRESSQSVSLEAKRETTTVGVQL*WLILFP Trigger: TGGGAAAAGGATGAGCCAGCAGAGCTGGACACCAAC...GGTGGTGGTCTCTCTTTTAGCCTCAAGTGAAACTGACTGGGAGGATTCCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR GCA 90 bp | CATCCTCTAGGGCAGGGTAAGGACACAGCAGCTGATTTCTCTGGAGACTGGAGCAGGATCCTAAATGCATaGTTGTCTGCCTGCTGGCTG | + |
Preference number: 4 (lower is better) Translates to: HPLGQGKDTAADFSGDWSRILNA*LSACWL Trigger: CAGCCAGCAGGCAGACAAGCATGCATTTAGGATCCT...GCTCCAGTCTCCAGAGAAATCAGCTGCTGTGTCCTTACCCTGCCCTAGAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CCA 90 bp | AGGGTCAACCTACATCCCAGGGAATCCTCCCAGTCAGTTTCACTTGAGGCTAAACTCCTTTTCCGGGCCTaGCGTTTCAGAGGGCAAGAC | + |
Preference number: 4 (lower is better) Translates to: RVNLHPRESSQSVSLEAKLLFRA*RFRGQD Trigger: GTCTTGCCCTCTGAAACGCCAGGCCCGGAAAAGGAG...TTTAGCCTCAAGTGAAACTGACTGGGAGGATTCCCTGGGATGTAGGTTGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CCA 90 bp | TCCATGAAGGCGACTGAGTCTAGCTTGGAAACCTCCTCTGCCAGGATGGGACATATCTCTGCAGCCTTCTaGCAGCTGGGTCATTGTCCT | + |
Preference number: 4 (lower is better) Translates to: SMKATESSLETSSARMGHISAAF*QLGHCP Trigger: AGGACAATGACCCAGCTGCCAGAAGGCTGCAGAGAT...ATGTCCCATCCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCGCCTTCATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR CCA 90 bp | CCCAGGGTCAACCTACATCCCAGGGAATCCTCCCAGTCAGTTTCACTTGAGGCTCCATCCTGTCCTTGTTaGGCTGGCTTCTTTCTTCAC | + |
Preference number: 4 (lower is better) Translates to: PRVNLHPRESSQSVSLEAPSCPC*AGFFLH Trigger: GTGAAGAAAGAAGCCAGCCCAACAAGGACAGGATGG...AGCCTCAAGTGAAACTGACTGGGAGGATTCCCTGGGATGTAGGTTGACCCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CCA 90 bp | TTTGGCTACCGTAGGGAGTGGATGGGAAGGGAAGAGACCCTAACTGACTGGCTTCGACTGAGTCTAGCTTaGAAACCTCCTCTGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: FGYRREWMGREETLTDWLRLSLA*KPPLPG Trigger: TCCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCG...AAGCCAGTCAGTTAGGGTCTCTTCCCTTCCCATCCACTCCCTACGGTAGCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160570.2 |
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CDS-3UTR CCA 90 bp | GAATGTGATCCTCAGACCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACGACTGAGTCTAGCTTaGAAACCTCCTCTGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: ECDPQTHWVCSTVSEHHVRLSLA*KPPLPG Trigger: TCCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCG...TACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGGTCTGAGGATCACATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR CCA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGATGGCGATGGGCGTCTaGGGAGAAGTGAACCATCCT | + |
Preference number: 4 (lower is better) Translates to: SECLVPLFLLYLVSGLGQMAMGV*GEVNHP Trigger: AGGATGGTTCACTTCTCCCCAGACGCCCATCGCCAT...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR CCA 90 bp | CAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAGACAGTTCCTAGAAGAAATCAATTCCTGCTGCAGTaGGTCCAGGCAACGGGGCAG | + |
Preference number: 4 (lower is better) Translates to: QPTSYHGHFSGKTVPRRNQFLLQ*VQATGQ Trigger: CTGCCCCGTTGCCTGGACCCACTGCAGCAGGAATTG...ATTTCTTCTAGGAACTGTCTTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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3UTR CAA 72 bp | GTCTGCCTGCTGGCTGTTTTCAGGGAGCAGCTTTTCTaGTGTCCTCTTTCCGCTCGGTTATCTCTCAGAAGC | + |
Preference number: 4 (lower is better) Translates to: VCLLAVFREQLF*CPLSARLSLRS Trigger: GCTTCTGAGAGATAACCGAGCGGAAAGAGGACACAAGAAAAGCTGCTCCCTGAAAACAGCCAGCAGGCAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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CDS-3UTR TCA 90 bp | AACCTACATCCCAGGGAATCCTCCCAGTCAGTTTCACTTGAGGCTAAAAGAGAGCCGCGTCAGTGCTGCTaGGACTGCTGGTGTCACTTT | + |
Preference number: 4 (lower is better) Translates to: NLHPRESSQSVSLEAKREPRQCC*DCWCHF Trigger: AAAGTGACACCAGCAGTCTCAGCAGCACTGACGCGG...CTCTCTTTTAGCCTCAAGTGAAACTGACTGGGAGGATTCCCTGGGATGTAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR TCA 90 bp | GAATGTGATCCTCAGACCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTATTTGAAGGCGTTCCATaGAGGCGACTGAGTCTAGCT | + |
Preference number: 4 (lower is better) Translates to: ECDPQTHWVCSTVSEHHVFEGVP*RRLSLA Trigger: AGCTAGACTCAGTCGCCTTCATGGAACGCCTTCAAA...TACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGGTCTGAGGATCACATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR GCA 90 bp | TCTCTAGGATCGGCTGGGCGTTCTCACCCACAATTCCTGCTGCAGTGGGTCCAGGGTCATCAGAGTCACTaGGGTCCTTTTTATTATTGC | + |
Preference number: 4 (lower is better) Translates to: SLGSAGRSHPQFLLQWVQGHQSH*GPFYYC Trigger: GCAATAATAAAAAGGACCGCAGTGACTCTGATGACC...CTGGACCCACTGCAGCAGGAATTGTGGGTGAGAACGCCCAGCCGATCCTAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGGGAGATCCACGGCCATaGGCTTCACCTTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: SYKPSSEPKQREVSSLSKGDPRP*ASPSSS Trigger: GGAGGAGGAAGGTGAAGCGCATGGCCGTGGATCTCC...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | TGTCCTAGCCCCAGGGCTAAACCAGTGGCCAGTAAATTGTTTCCTAAAAGGATTTTGCTGGAGACGTCCTaGGGGAGATCCACGGCCATG | + |
Preference number: 4 (lower is better) Translates to: CPSPRAKPVASKLFPKRILLETS*GRSTAM Trigger: CATGGCCGTGGATCTCCCGCAGGACGTCTCCAGCAA...AATCCTTTTAGGAAACAATTTACTGGCCACTGGTTTAGCCCTGGGGCTAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | CATCCTCTAGGGCAGGGTAAGGACACAGCAGCTGATTTCTCTGGAGACTGGAGCAAATGCATGCTTGTCTaGCTGCTGGCTGTTTTCAGG | + |
Preference number: 4 (lower is better) Translates to: HPLGQGKDTAADFSGDWSKCMLV*LLAVFR Trigger: CCTGAAAACAGCCAGCAGGCAGACAAGCATGCATTT...GCTCCAGTCTCCAGAGAAATCAGCTGCTGTGTCCTTACCCTGCCCTAGAGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR GCA 90 bp | TTTGGCTACCGTAGGGAGTGGATGGGAAGGGAAGAGACCCTAACTGACTGGCTTAGGATCCTAAATGCATaGTTGTCTGCCTGCTGGCTG | + |
Preference number: 4 (lower is better) Translates to: FGYRREWMGREETLTDWLRILNA*LSACWL Trigger: CAGCCAGCAGGCAGACAAGCATGCATTTAGGATCCT...AAGCCAGTCAGTTAGGGTCTCTTCCCTTCCCATCCACTCCCTACGGTAGCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065573.14 ENSMUST00000160570.2 |
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CDS-3UTR CCA 90 bp | AGAGGGAAGGAGCCACTTAAGATACTCTCAAACACAGGGTCGGGCAGGTTGGTGTTCGCCACTAACATCTaGTCATCAGAGTCACTGCGG | + |
Preference number: 4 (lower is better) Translates to: RGKEPLKILSNTGSGRLVFATNI*SSESLR Trigger: CCGCAGTGACTCTGATGACCAGATGTTAGTGGCGAA...CACCAACCTGCCCGACCCTGTGTTTGAGAGTATCTTAAGTGGCTCCTTCCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR CCA 90 bp | CCACTTAAGATACTCTCAAACACAGGGTCGGGCAGGTTGGTGTCCAGCTCTGCTCTTCCGGGTAAACTCTaGATACTGGCTGGCTCTATC | + |
Preference number: 4 (lower is better) Translates to: PLKILSNTGSGRLVSSSALPGKL*ILAGSI Trigger: GATAGAGCCAGCCAGTATCCAGAGTTTACCCGGAAG...AGCAGAGCTGGACACCAACCTGCCCGACCCTGTGTTTGAGAGTATCTTAAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
||
CDS-3UTR CCA 90 bp | AGAGGGAAGGAGCCACTTAAGATACTCTCAAACACAGGGTCGGGCAGGTTGGTGCTGTCCTTGTTGGGCTaGCTTCTTTCTTCACTCTCC | + |
Preference number: 4 (lower is better) Translates to: RGKEPLKILSNTGSGRLVLSLLG*LLSSLS Trigger: GGAGAGTGAAGAAAGAAGCCAGCCCAACAAGGACAG...CACCAACCTGCCCGACCCTGTGTTTGAGAGTATCTTAAGTGGCTCCTTCCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR CCA 90 bp | AGAGGGAAGGAGCCACTTAAGATACTCTCAAACACAGGGTCGGGCAGGTTGGTGCCATCCTGTCCTTGTTaGGCTGGCTTCTTTCTTCAC | + |
Preference number: 4 (lower is better) Translates to: RGKEPLKILSNTGSGRLVPSCPC*AGFFLH Trigger: GTGAAGAAAGAAGCCAGCCCAACAAGGACAGGATGG...CACCAACCTGCCCGACCCTGTGTTTGAGAGTATCTTAAGTGGCTCCTTCCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
||
CDS-3UTR CCA 90 bp | GAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTTAGGTGTCCAGCTCTGCTaGCTCATCCTTTTCCCACCA | + |
Preference number: 4 (lower is better) Translates to: ECLVPLFLLYLVSGLGQLGVQLC*LILFPP Trigger: TGGTGGGAAAAGGATGAGCCAGCAGAGCTGGACACC...TAACTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | GAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTTAATGGCGATGGGCGTCTaGGGAGAAGTGAACCATCCT | + |
Preference number: 4 (lower is better) Translates to: ECLVPLFLLYLVSGLGQLMAMGV*GEVNHP Trigger: AGGATGGTTCACTTCTCCCCAGACGCCCATCGCCAT...TAACTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR GCA 90 bp | ATCTCCCCAGGGTCAACCTACATCCCAGGGAATCCTCCCAGTCAGTTTCACTTGAGAGCTCTCTTCCAGTaGAGAGACAAGATCGTGAAC | + |
Preference number: 4 (lower is better) Translates to: ISPGSTYIPGNPPSQFHLRALFQ*RDKIVN Trigger: GTTCACGATCTTGTCTCTGCACTGGAAGAGAGCTCT...CAAGTGAAACTGACTGGGAGGATTCCCTGGGATGTAGGTTGACCCTGGGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR GCA 90 bp | GAATGTGATCCTCAGACCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTAAGAGCTCTCTTCCAGTaGAGAGACAAGATCGTGAAC | + |
Preference number: 4 (lower is better) Translates to: ECDPQTHWVCSTVSEHHVRALFQ*RDKIVN Trigger: GTTCACGATCTTGTCTCTGCACTGGAAGAGAGCTCT...TACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGGTCTGAGGATCACATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | CACACTTCAGTGTGTCCCTCCCGGGAAGAGGACAGGAGCCAGGTTCCTTCGAATGGTCATCAGAGTCACTaGGGTCCTTTTTATTATTGC | + |
Preference number: 4 (lower is better) Translates to: HTSVCPSREEDRSQVPSNGHQSH*GPFYYC Trigger: GCAATAATAAAAAGGACCGCAGTGACTCTGATGACC...ATTCGAAGGAACCTGGCTCCTGTCCTCTTCCCGGGAGGGACACACTGAAGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CCA 90 bp | AGGGTCAACCTACATCCCAGGGAATCCTCCCAGTCAGTTTCACTTGAGGCTAAAATCTCTGCAGCCTTCTaGCAGCTGGGTCATTGTCCT | + |
Preference number: 4 (lower is better) Translates to: RVNLHPRESSQSVSLEAKISAAF*QLGHCP Trigger: AGGACAATGACCCAGCTGCCAGAAGGCTGCAGAGAT...TTTAGCCTCAAGTGAAACTGACTGGGAGGATTCCCTGGGATGTAGGTTGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CCA 90 bp | CAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAGACAGTTCCTAGAAGAAATACTCCTCCTTCCTCCTaGGTTTTCGGTCCTGGCCTA | + |
Preference number: 4 (lower is better) Translates to: QPTSYHGHFSGKTVPRRNTPPSS*VFGPGL Trigger: TAGGCCAGGACCGAAAACCCAGGAGGAAGGAGGAGT...ATTTCTTCTAGGAACTGTCTTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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3UTR CAA 72 bp | ACCTACATCCCAGGGAATCCTCCCAGTCAGTTTCACTaGAGGCTAAAAGAGAGACCACCACCAATCCTGCAG | + |
Preference number: 4 (lower is better) Translates to: TYIPGNPPSQFH*RLKERPPPILQ Trigger: CTGCAGGATTGGTGGTGGTCTCTCTTTTAGCCTCAAGTGAAACTGACTGGGAGGATTCCCTGGGATGTAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR TCA 90 bp | GAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTTATTTGAAGGCGTTCCATaGAGGCGACTGAGTCTAGCT | + |
Preference number: 4 (lower is better) Translates to: ECLVPLFLLYLVSGLGQLFEGVP*RRLSLA Trigger: AGCTAGACTCAGTCGCCTTCATGGAACGCCTTCAAA...TAACTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR GCA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGGGGTCATTGTCCTTTTaGTGGAGACGTCCTGCGGGA | + |
Preference number: 4 (lower is better) Translates to: SYKPSSEPKQREVSSLSKGSLSF*WRRPAG Trigger: TCCCGCAGGACGTCTCCAGCAAAAGGACAATGACCC...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGAAATGCATGCTTGTCTaGCTGCTGGCTGTTTTCAGG | + |
Preference number: 4 (lower is better) Translates to: SECLVPLFLLYLVSGLGQKCMLV*LLAVFR Trigger: CCTGAAAACAGCCAGCAGGCAGACAAGCATGCATTT...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CCA 90 bp | TTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTCCTTCACTTAAGCAGTaGCCTGTCTCCCACGGGTGG | + |
Preference number: 4 (lower is better) Translates to: FSIRMPGPSVPSVLGKWVPSLKQ*PVSHGW Trigger: CCACCCGTGGGAGACAGGCCACTGCTTAAGTGAAGG...AACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | AGGGTCAACCTACATCCCAGGGAATCCTCCCAGTCAGTTTCACTTGAGGCTAAATTCGCCACTAACATCTaGTCATCAGAGTCACTGCGG | + |
Preference number: 4 (lower is better) Translates to: RVNLHPRESSQSVSLEAKFATNI*SSESLR Trigger: CCGCAGTGACTCTGATGACCAGATGTTAGTGGCGAA...TTTAGCCTCAAGTGAAACTGACTGGGAGGATTCCCTGGGATGTAGGTTGACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CCA 90 bp | GAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTTATTCGCCACTAACATCTaGTCATCAGAGTCACTGCGG | + |
Preference number: 4 (lower is better) Translates to: ECLVPLFLLYLVSGLGQLFATNI*SSESLR Trigger: CCGCAGTGACTCTGATGACCAGATGTTAGTGGCGAA...TAACTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGACTCCTCCTTCCTCCTaGGTTTTCGGTCCTGGCCTA | + |
Preference number: 4 (lower is better) Translates to: SYKPSSEPKQREVSSLSKTPPSS*VFGPGL Trigger: TAGGCCAGGACCGAAAACCCAGGAGGAAGGAGGAGT...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | AGGGTCAACCTACATCCCAGGGAATCCTCCCAGTCAGTTTCACTTGAGGCTAAACTGTCCTTGTTGGGCTaGCTTCTTTCTTCACTCTCC | + |
Preference number: 4 (lower is better) Translates to: RVNLHPRESSQSVSLEAKLSLLG*LLSSLS Trigger: GGAGAGTGAAGAAAGAAGCCAGCCCAACAAGGACAG...TTTAGCCTCAAGTGAAACTGACTGGGAGGATTCCCTGGGATGTAGGTTGACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CCA 90 bp | TTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTCCTCCTCTGCCAGGATaGGACATGAGAGGGAAGGAG | + |
Preference number: 4 (lower is better) Translates to: FSIRMPGPSVPSVLGKWVPPLPG*DMRGKE Trigger: CTCCTTCCCTCTCATGTCCCATCCTGGCAGAGGAGG...AACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | ACGTCACATCTTGCTGCTCTTTATAAGGACTTGAATGCTGAAGGGTACCTGTGGATGGCGATGGGCGTCTaGGGAGAAGTGAACCATCCT | + |
Preference number: 4 (lower is better) Translates to: TSHLAALYKDLNAEGYLWMAMGV*GEVNHP Trigger: AGGATGGTTCACTTCTCCCCAGACGCCCATCGCCAT...CCACAGGTACCCTTCAGCATTCAAGTCCTTATAAAGAGCAGCAAGATGTGACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR TCA 90 bp | AAGTCCCCTCCTAGGGCTTTACAAGACCATCAAGAAATGAAACTCAAAGAAGAGCCGCGTCAGTGCTGCTaGGACTGCTGGTGTCACTTT | + |
Preference number: 4 (lower is better) Translates to: KSPPRALQDHQEMKLKEEPRQCC*DCWCHF Trigger: AAAGTGACACCAGCAGTCTCAGCAGCACTGACGCGG...CTCTTCTTTGAGTTTCATTTCTTGATGGTCTTGTAAAGCCCTAGGAGGGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR TCA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTACCGCGTCAGTGCTGCTaGGACTGCTGGTGTCACTTT | + |
Preference number: 4 (lower is better) Translates to: TKCLVSECLVPLFLLYLVPRQCC*DCWCHF Trigger: AAAGTGACACCAGCAGTCTCAGCAGCACTGACGCGG...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR TCA 90 bp | CCGGGAAGAGGACAGGAGCCAGGTTCCTTCGAATGTCATTCCCCAGGTGTTCAACTTTTTAATATTCTTTaGAGGCGTTCCATGAAGGCG | + |
Preference number: 4 (lower is better) Translates to: PGRGQEPGSFECHSPGVQLFNIL*RRSMKA Trigger: CGCCTTCATGGAACGCCTTCAAAGAATATTAAAAAG...TTGAACACCTGGGGAATGACATTCGAAGGAACCTGGCTCCTGTCCTCTTCCCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR GCA 90 bp | AGCCACTTAAGATACTCTCAAACACAGGGTCGGGCAGGTTGGTGTCCAGCTCTGGGTCATCAGAGTCACTaGGGTCCTTTTTATTATTGC | + |
Preference number: 4 (lower is better) Translates to: SHLRYSQTQGRAGWCPALGHQSH*GPFYYC Trigger: GCAATAATAAAAAGGACCGCAGTGACTCTGATGACC...CAGAGCTGGACACCAACCTGCCCGACCCTGTGTTTGAGAGTATCTTAAGTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR GCA 90 bp | TTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTCCATCCTCTTGTTACTaGCAGGGCCAGGAGCAGACA | + |
Preference number: 4 (lower is better) Translates to: FSIRMPGPSVPSVLGKWVPSSCY*QGQEQT Trigger: TGTCTGCTCCTGGCCCTGGCAGTAACAAGAGGATGG...AACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR GCA 90 bp | TTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTGCATGCTTGTCTGCCTaGTGGCTGTTTTCAGGGAGC | + |
Preference number: 4 (lower is better) Translates to: FSIRMPGPSVPSVLGKWVACLSA*WLFSGS Trigger: GCTCCCTGAAAACAGCCAGCAGGCAGACAAGCATGC...AACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR GCA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGCACAAGGATCCTAAATaGATGCTTGTCTGCTCATGG | + |
Preference number: 4 (lower is better) Translates to: SECLVPLFLLYLVSGLGQHKDPK*MLVCSW Trigger: CCATGAGCAGACAAGCATGCATTTAGGATCCTTGTG...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110943.9 |
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CDS-3UTR CCA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGATCTCTGCAGCCTTCTaGCAGCTGGGTCATTGTCCT | + |
Preference number: 4 (lower is better) Translates to: SYKPSSEPKQREVSSLSKISAAF*QLGHCP Trigger: AGGACAATGACCCAGCTGCCAGAAGGCTGCAGAGAT...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | ACGTCACATCTTGCTGCTCTTTATAAGGACTTGAATGCTGAAGGGTACCTGTGGATCTCTGCAGCCTTCTaGCAGCTGGGTCATTGTCCT | + |
Preference number: 4 (lower is better) Translates to: TSHLAALYKDLNAEGYLWISAAF*QLGHCP Trigger: AGGACAATGACCCAGCTGCCAGAAGGCTGCAGAGAT...CCACAGGTACCCTTCAGCATTCAAGTCCTTATAAAGAGCAGCAAGATGTGACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CCA 90 bp | CAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAGACAGTTCCTAGAAGAAATCCATCCTGTCCTTGTTaGGCTGGCTTCTTTCTTCAC | + |
Preference number: 4 (lower is better) Translates to: QPTSYHGHFSGKTVPRRNPSCPC*AGFFLH Trigger: GTGAAGAAAGAAGCCAGCCCAACAAGGACAGGATGG...ATTTCTTCTAGGAACTGTCTTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CCA 90 bp | CTGAACAAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGCAGGGTCGGGCAGGTTaGTGTCCAGCTCTGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: LNKEQLRISDLMERTTEWQGRAG*CPALLA Trigger: AGCCAGCAGAGCTGGACACCAACCTGCCCGACCCTG...CCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTTGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | GAAATGAAACTCAAAGAAGAGCAAACAAGTTTGGAAAAGACCCTTGAGTCCAGTCAGGGTCGGGCAGGTTaGTGTCCAGCTCTGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: EMKLKEEQTSLEKTLESSQGRAG*CPALLA Trigger: AGCCAGCAGAGCTGGACACCAACCTGCCCGACCCTG...ACTGGACTCAAGGGTCTTTTCCAAACTTGTTTGCTCTTCTTTGAGTTTCATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CCA 90 bp | GGAGCCAGGTTCCTTCGAATGTCATTCCCCAGGTGTTCAAATGTAACTAATTTACCTCCTCTGCCAGGATaGGACATGAGAGGGAAGGAG | + |
Preference number: 4 (lower is better) Translates to: GARFLRMSFPRCSNVTNLPPLPG*DMRGKE Trigger: CTCCTTCCCTCTCATGTCCCATCCTGGCAGAGGAGG...TAAATTAGTTACATTTGAACACCTGGGGAATGACATTCGAAGGAACCTGGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CCA 90 bp | CCTCCTAGGGCTTTACAAGACCATCAAGAAATGAAACTCAAAGAAGAGCAAACACAATTCCTGCTGCAGTaGGTCCAGGCAACGGGGCAG | + |
Preference number: 4 (lower is better) Translates to: PPRALQDHQEMKLKEEQTQFLLQ*VQATGQ Trigger: CTGCCCCGTTGCCTGGACCCACTGCAGCAGGAATTG...TGTTTGCTCTTCTTTGAGTTTCATTTCTTGATGGTCTTGTAAAGCCCTAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR TCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGCCGCGTCAGTGCTGCTaGGACTGCTGGTGTCACTTT | + |
Preference number: 4 (lower is better) Translates to: RISDLMERTTEWNGRNIVPRQCC*DCWCHF Trigger: AAAGTGACACCAGCAGTCTCAGCAGCACTGACGCGG...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
||
CDS-3UTR GCA 90 bp | CTGAACAAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGTTGCTGGAGACGTCCTaGGGGAGATCCACGGCCATG | + |
Preference number: 4 (lower is better) Translates to: LNKEQLRISDLMERTTEWLLETS*GRSTAM Trigger: CATGGCCGTGGATCTCCCGCAGGACGTCTCCAGCAA...CCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTTGTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTACCATCCTCTTGTTACTaGCAGGGCCAGGAGCAGACA | + |
Preference number: 4 (lower is better) Translates to: TKCLVSECLVPLFLLYLVPSSCY*QGQEQT Trigger: TGTCTGCTCCTGGCCCTGGCAGTAACAAGAGGATGG...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR CCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGCCTTCACTTAAGCAGTaGCCTGTCTCCCACGGGTGG | + |
Preference number: 4 (lower is better) Translates to: RISDLMERTTEWNGRNIVPSLKQ*PVSHGW Trigger: CCACCCGTGGGAGACAGGCCACTGCTTAAGTGAAGG...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | AGAAAGACAGCTATTAAAAATGGCAGTTTACTAGTCACGAGCTTGTTCCAGCAGCCTTCACTTAAGCAGTaGCCTGTCTCCCACGGGTGG | + |
Preference number: 4 (lower is better) Translates to: RKTAIKNGSLLVTSLFQQPSLKQ*PVSHGW Trigger: CCACCCGTGGGAGACAGGCCACTGCTTAAGTGAAGG...CTGCTGGAACAAGCTCGTGACTAGTAAACTGCCATTTTTAATAGCTGTCTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CCA 90 bp | ACGTCACATCTTGCTGCTCTTTATAAGGACTTGAATGCTGAAGGGTACCTGTGGCTGTCCTTGTTGGGCTaGCTTCTTTCTTCACTCTCC | + |
Preference number: 4 (lower is better) Translates to: TSHLAALYKDLNAEGYLWLSLLG*LLSSLS Trigger: GGAGAGTGAAGAAAGAAGCCAGCCCAACAAGGACAG...CCACAGGTACCCTTCAGCATTCAAGTCCTTATAAAGAGCAGCAAGATGTGACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CCA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGCTGTCCTTGTTGGGCTaGCTTCTTTCTTCACTCTCC | + |
Preference number: 4 (lower is better) Translates to: SYKPSSEPKQREVSSLSKLSLLG*LLSSLS Trigger: GGAGAGTGAAGAAAGAAGCCAGCCCAACAAGGACAG...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | AAGTCCCCTCCTAGGGCTTTACAAGACCATCAAGAAATGAAACTCAAAGAAGAGGGTGTCCAGCTCTGCTaGCTCATCCTTTTCCCACCA | + |
Preference number: 4 (lower is better) Translates to: KSPPRALQDHQEMKLKEEGVQLC*LILFPP Trigger: TGGTGGGAAAAGGATGAGCCAGCAGAGCTGGACACC...CTCTTCTTTGAGTTTCATTTCTTGATGGTCTTGTAAAGCCCTAGGAGGGGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CCA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAGGTGTCCAGCTCTGCTaGCTCATCCTTTTCCCACCA | + |
Preference number: 4 (lower is better) Translates to: TKCLVSECLVPLFLLYLVGVQLC*LILFPP Trigger: TGGTGGGAAAAGGATGAGCCAGCAGAGCTGGACACC...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGCCTCCTCTGCCAGGATaGGACATGAGAGGGAAGGAG | + |
Preference number: 4 (lower is better) Translates to: RISDLMERTTEWNGRNIVPPLPG*DMRGKE Trigger: CTCCTTCCCTCTCATGTCCCATCCTGGCAGAGGAGG...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR TCA 90 bp | GGAGCCAGGTTCCTTCGAATGTCATTCCCCAGGTGTTCAAATGTAACTAATTTACTTCCATTGTTCGACTaGAATGCCAGCTCTTCCCGG | + |
Preference number: 4 (lower is better) Translates to: GARFLRMSFPRCSNVTNLLPLFD*NASSSR Trigger: CCGGGAAGAGCTGGCATTTCAGTCGAACAATGGAAG...TAAATTAGTTACATTTGAACACCTGGGGAATGACATTCGAAGGAACCTGGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR GCA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAATCCACCTCGGGCTTaGTCAGAGCTCTCTTCCAGT | + |
Preference number: 4 (lower is better) Translates to: TKCLVSECLVPLFLLYLVNPPRA*SELSSS Trigger: ACTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATT...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAGGAGATCCACGGCCATaGGCTTCACCTTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: KEQLRISDLMERTTEWNGGDPRP*ASPSSS Trigger: GGAGGAGGAAGGTGAAGCGCATGGCCGTGGATCTCC...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | AGAAAGACAGCTATTAAAAATGGCAGTTTACTAGTCACGAGCTTGTTCCAGCAGGGGTCATTGTCCTTTTaGTGGAGACGTCCTGCGGGA | + |
Preference number: 4 (lower is better) Translates to: RKTAIKNGSLLVTSLFQQGSLSF*WRRPAG Trigger: TCCCGCAGGACGTCTCCAGCAAAAGGACAATGACCC...CTGCTGGAACAAGCTCGTGACTAGTAAACTGCCATTTTTAATAGCTGTCTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR GCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGGGGTCATTGTCCTTTTaGTGGAGACGTCCTGCGGGA | + |
Preference number: 4 (lower is better) Translates to: RISDLMERTTEWNGRNIVGSLSF*WRRPAG Trigger: TCCCGCAGGACGTCTCCAGCAAAAGGACAATGACCC...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | ACGTCACATCTTGCTGCTCTTTATAAGGACTTGAATGCTGAAGGGTACCTGTGGAAATGCATGCTTGTCTaGCTGCTGGCTGTTTTCAGG | + |
Preference number: 4 (lower is better) Translates to: TSHLAALYKDLNAEGYLWKCMLV*LLAVFR Trigger: CCTGAAAACAGCCAGCAGGCAGACAAGCATGCATTT...CCACAGGTACCCTTCAGCATTCAAGTCCTTATAAAGAGCAGCAAGATGTGACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CCA 90 bp | CTGAACAAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGCCTTCACTTAAGCAGTaGCCTGTCTCCCACGGGTGG | + |
Preference number: 4 (lower is better) Translates to: LNKEQLRISDLMERTTEWPSLKQ*PVSHGW Trigger: CCACCCGTGGGAGACAGGCCACTGCTTAAGTGAAGG...CCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTTGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGACTCCTCCTTCCTCCTaGGTTTTCGGTCCTGGCCTA | + |
Preference number: 4 (lower is better) Translates to: RISDLMERTTEWNGRNIVTPPSS*VFGPGL Trigger: TAGGCCAGGACCGAAAACCCAGGAGGAAGGAGGAGT...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | CTGAACAAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGCCTCCTCTGCCAGGATaGGACATGAGAGGGAAGGAG | + |
Preference number: 4 (lower is better) Translates to: LNKEQLRISDLMERTTEWPPLPG*DMRGKE Trigger: CTCCTTCCCTCTCATGTCCCATCCTGGCAGAGGAGG...CCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTTGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | CTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATACCTCCTCTGCCAGGATaGGACATGAGAGGGAAGGAG | + |
Preference number: 4 (lower is better) Translates to: LRISDLMERTTEWNGRNIPPLPG*DMRGKE Trigger: CTCCTTCCCTCTCATGTCCCATCCTGGCAGAGGAGG...TATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTACGACTGAGTCTAGCTTaGAAACCTCCTCTGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: TKCLVSECLVPLFLLYLVRLSLA*KPPLPG Trigger: TCCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCG...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR CCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGATGGCGATGGGCGTCTaGGGAGAAGTGAACCATCCT | + |
Preference number: 4 (lower is better) Translates to: RISDLMERTTEWNGRNIVMAMGV*GEVNHP Trigger: AGGATGGTTCACTTCTCCCCAGACGCCCATCGCCAT...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR TCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGCTTCCATTGTTCGACTaGAATGCCAGCTCTTCCCGG | + |
Preference number: 4 (lower is better) Translates to: RISDLMERTTEWNGRNIVLPLFD*NASSSR Trigger: CCGGGAAGAGCTGGCATTTCAGTCGAACAATGGAAG...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160481.8 |
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CDS-3UTR TCA 90 bp | AGAAAGACAGCTATTAAAAATGGCAGTTTACTAGTCACGAGCTTGTTCCAGCAGCTTCCATTGTTCGACTaGAATGCCAGCTCTTCCCGG | + |
Preference number: 4 (lower is better) Translates to: RKTAIKNGSLLVTSLFQQLPLFD*NASSSR Trigger: CCGGGAAGAGCTGGCATTTCAGTCGAACAATGGAAG...CTGCTGGAACAAGCTCGTGACTAGTAAACTGCCATTTTTAATAGCTGTCTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 |
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CDS-3UTR GCA 90 bp | CCTCCTAGGGCTTTACAAGACCATCAAGAAATGAAACTCAAAGAAGAGCAAACAGTTGGTGTCCAGCTCTaGTGGCTCATCCTTTTCCCA | + |
Preference number: 4 (lower is better) Translates to: PPRALQDHQEMKLKEEQTVGVQL*WLILFP Trigger: TGGGAAAAGGATGAGCCAGCAGAGCTGGACACCAAC...TGTTTGCTCTTCTTTGAGTTTCATTTCTTGATGGTCTTGTAAAGCCCTAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR GCA 90 bp | ATAAGAGACCAACTATTCTTCATGTCTAGAAACTGCTGGAAACCGAGGAAACACGTTGGTGTCCAGCTCTaGTGGCTCATCCTTTTCCCA | + |
Preference number: 4 (lower is better) Translates to: IRDQLFFMSRNCWKPRKHVGVQL*WLILFP Trigger: TGGGAAAAGGATGAGCCAGCAGAGCTGGACACCAAC...GTGTTTCCTCGGTTTCCAGCAGTTTCTAGACATGAAGAATAGTTGGTCTCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGACTCCTTTTCCGGGCCTaGCGTTTCAGAGGGCAAGAC | + |
Preference number: 4 (lower is better) Translates to: KEQLRISDLMERTTEWNGLLFRA*RFRGQD Trigger: GTCTTGCCCTCTGAAACGCCAGGCCCGGAAAAGGAG...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | GGAGCCAGGTTCCTTCGAATGTCATTCCCCAGGTGTTCAAATGTAACTAATTTACTTCCGGGTAAACTCTaGATACTGGCTGGCTCTATC | + |
Preference number: 4 (lower is better) Translates to: GARFLRMSFPRCSNVTNLLPGKL*ILAGSI Trigger: GATAGAGCCAGCCAGTATCCAGAGTTTACCCGGAAG...TAAATTAGTTACATTTGAACACCTGGGGAATGACATTCGAAGGAACCTGGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CCA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTACTGTCCTTGTTGGGCTaGCTTCTTTCTTCACTCTCC | + |
Preference number: 4 (lower is better) Translates to: TKCLVSECLVPLFLLYLVLSLLG*LLSSLS Trigger: GGAGAGTGAAGAAAGAAGCCAGCCCAACAAGGACAG...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTACCATCCTGTCCTTGTTaGGCTGGCTTCTTTCTTCAC | + |
Preference number: 4 (lower is better) Translates to: TKCLVSECLVPLFLLYLVPSCPC*AGFFLH Trigger: GTGAAGAAAGAAGCCAGCCCAACAAGGACAGGATGG...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR TCA 90 bp | ATAAGAGACCAACTATTCTTCATGTCTAGAAACTGCTGGAAACCGAGGAAACACTTTGAAGGCGTTCCATaGAGGCGACTGAGTCTAGCT | + |
Preference number: 4 (lower is better) Translates to: IRDQLFFMSRNCWKPRKHFEGVP*RRLSLA Trigger: AGCTAGACTCAGTCGCCTTCATGGAACGCCTTCAAA...GTGTTTCCTCGGTTTCCAGCAGTTTCTAGACATGAAGAATAGTTGGTCTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR GCA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGAGCTCTCTTCCAGTaGAGAGACAAGATCGTGAAC | + |
Preference number: 4 (lower is better) Translates to: TKCLVSECLVPLFLLYLVRALFQ*RDKIVN Trigger: GTTCACGATCTTGTCTCTGCACTGGAAGAGAGCTCT...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | CTGAACAAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATCCACCTCGGGCTTaGTCAGAGCTCTCTTCCAGT | + |
Preference number: 4 (lower is better) Translates to: LNKEQLRISDLMERTTEWNPPRA*SELSSS Trigger: ACTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATT...CCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTTGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | CTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTTGGTGTCCAGCTCTaGTGGCTCATCCTTTTCCCA | + |
Preference number: 4 (lower is better) Translates to: LRISDLMERTTEWNGRNIVGVQL*WLILFP Trigger: TGGGAAAAGGATGAGCCAGCAGAGCTGGACACCAAC...TATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR GCA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGACCATCCTCTTGTTACTaGCAGGGCCAGGAGCAGACA | + |
Preference number: 4 (lower is better) Translates to: KEQLRISDLMERTTEWNGPSSCY*QGQEQT Trigger: TGTCTGCTCCTGGCCCTGGCAGTAACAAGAGGATGG...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR CCA 90 bp | ATAAGAGACCAACTATTCTTCATGTCTAGAAACTGCTGGAAACCGAGGAAACACTTCGCCACTAACATCTaGTCATCAGAGTCACTGCGG | + |
Preference number: 4 (lower is better) Translates to: IRDQLFFMSRNCWKPRKHFATNI*SSESLR Trigger: CCGCAGTGACTCTGATGACCAGATGTTAGTGGCGAA...GTGTTTCCTCGGTTTCCAGCAGTTTCTAGACATGAAGAATAGTTGGTCTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | CTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAATCTCTGCAGCCTTCTaGCAGCTGGGTCATTGTCCT | + |
Preference number: 4 (lower is better) Translates to: LRISDLMERTTEWNGRNIISAAF*QLGHCP Trigger: AGGACAATGACCCAGCTGCCAGAAGGCTGCAGAGAT...TATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | CTGAACAAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGCGACTGAGTCTAGCTTaGAAACCTCCTCTGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: LNKEQLRISDLMERTTEWRLSLA*KPPLPG Trigger: TCCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCG...CCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTTGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR TCA 90 bp | CTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATATTTGAAGGCGTTCCATaGAGGCGACTGAGTCTAGCT | + |
Preference number: 4 (lower is better) Translates to: LRISDLMERTTEWNGRNIFEGVP*RRLSLA Trigger: AGCTAGACTCAGTCGCCTTCATGGAACGCCTTCAAA...TATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR TCA 90 bp | ACGTCACATCTTGCTGCTCTTTATAAGGACTTGAATGCTGAAGGGTACCTGTGGCTTTTTAATATTCTTTaGAGGCGTTCCATGAAGGCG | + |
Preference number: 4 (lower is better) Translates to: TSHLAALYKDLNAEGYLWLFNIL*RRSMKA Trigger: CGCCTTCATGGAACGCCTTCAAAGAATATTAAAAAG...CCACAGGTACCCTTCAGCATTCAAGTCCTTATAAAGAGCAGCAAGATGTGACGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR GCA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAATCCACCTCGGGCTTaGTCAGAGCTCTCTTCCAGT | + |
Preference number: 4 (lower is better) Translates to: KEQLRISDLMERTTEWNGNPPRA*SELSSS Trigger: ACTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATT...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CCA 90 bp | GAAATGAAACTCAAAGAAGAGCAAACAAGTTTGGAAAAGACCCTTGAGTCCAGTCTTCCGGGTAAACTCTaGATACTGGCTGGCTCTATC | + |
Preference number: 4 (lower is better) Translates to: EMKLKEEQTSLEKTLESSLPGKL*ILAGSI Trigger: GATAGAGCCAGCCAGTATCCAGAGTTTACCCGGAAG...ACTGGACTCAAGGGTCTTTTCCAAACTTGTTTGCTCTTCTTTGAGTTTCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CCA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGACGACTGAGTCTAGCTTaGAAACCTCCTCTGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: KEQLRISDLMERTTEWNGRLSLA*KPPLPG Trigger: TCCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCG...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
CDS-3UTR CCA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGATTCGCCACTAACATCTaGTCATCAGAGTCACTGCGG | + |
Preference number: 4 (lower is better) Translates to: KEQLRISDLMERTTEWNGFATNI*SSESLR Trigger: CCGCAGTGACTCTGATGACCAGATGTTAGTGGCGAA...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
||
CDS-3UTR TCA 90 bp | AAGTCCCCTCCTAGGGCTTTACAAGACCATCAAGAAATGAAACTCAAAGAAGAGCTTTTTAATATTCTTTaGAGGCGTTCCATGAAGGCG | + |
Preference number: 4 (lower is better) Translates to: KSPPRALQDHQEMKLKEELFNIL*RRSMKA Trigger: CGCCTTCATGGAACGCCTTCAAAGAATATTAAAAAG...CTCTTCTTTGAGTTTCATTTCTTGATGGTCTTGTAAAGCCCTAGGAGGGGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR GCA 90 bp | AGAAAGACAGCTATTAAAAATGGCAGTTTACTAGTCACGAGCTTGTTCCAGCAGGGTCATCAGAGTCACTaGGGTCCTTTTTATTATTGC | + |
Preference number: 4 (lower is better) Translates to: RKTAIKNGSLLVTSLFQQGHQSH*GPFYYC Trigger: GCAATAATAAAAAGGACCGCAGTGACTCTGATGACC...CTGCTGGAACAAGCTCGTGACTAGTAAACTGCCATTTTTAATAGCTGTCTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
||
CDS-3UTR TCA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGCTTTTTAATATTCTTTaGAGGCGTTCCATGAAGGCG | + |
Preference number: 4 (lower is better) Translates to: RISDLMERTTEWNGRNIVLFNIL*RRSMKA Trigger: CGCCTTCATGGAACGCCTTCAAAGAATATTAAAAAG...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
||
CDS-3UTR TCA 90 bp | CCTCCTAGGGCTTTACAAGACCATCAAGAAATGAAACTCAAAGAAGAGCAAACACTTTTTAATATTCTTTaGAGGCGTTCCATGAAGGCG | + |
Preference number: 4 (lower is better) Translates to: PPRALQDHQEMKLKEEQTLFNIL*RRSMKA Trigger: CGCCTTCATGGAACGCCTTCAAAGAATATTAAAAAG...TGTTTGCTCTTCTTTGAGTTTCATTTCTTGATGGTCTTGTAAAGCCCTAGGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
CDS-3UTR GCA 90 bp | AAAGAACAACTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAGGTCATCAGAGTCACTaGGGTCCTTTTTATTATTGC | + |
Preference number: 4 (lower is better) Translates to: KEQLRISDLMERTTEWNGGHQSH*GPFYYC Trigger: GCAATAATAAAAAGGACCGCAGTGACTCTGATGACC...TCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAGTTGTTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
||
3UTR CAA 72 bp | GTACTTGGTAAGTGGGTTAGGCCAGTTAGCTCAGTTTaGGGAAAAGCTATTTATATCTTCAAACAAACTGAC | + |
Preference number: 4 (lower is better) Translates to: VLGKWVRPVSSV*GKAIYIFKQTD Trigger: GTCAGTTTGTTTGAAGATATAAATAGCTTTTCCCAAAACTGAGCTAACTGGCCTAACCCACTTACCAAGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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3UTR CAA 72 bp | CAAAAGTACTTCAACGATTACTCGCTTACAAAACAGTaGCTCCAAATGAAATTCACGGAATACCAATTGGAA | + |
Preference number: 4 (lower is better) Translates to: QKYFNDYSLTKQ*LQMKFTEYQLE Trigger: TTCCAATTGGTATTCCGTGAATTTCATTTGGAGCAACTGTTTTGTAAGCGAGTAATCGTTGAAGTACTTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110943.9 |
||
CDS-3UTR CAA 90 bp | GAACTGGCTCCGCGATCCCTCTGCCATCTCGCCCGAGGCCTGACCCGGGTGTCCTGTCTTCCCTCATCGTaGGTGAACAAGCCCGCGTCA | + |
Preference number: 5 (lower is better) Translates to: ELAPRSLCHLARGLTRVSCLPSS*VNKPAS Trigger: TGACGCGGGCTTGTTCACCAACGATGAGGGAAGACA...GGACACCCGGGTCAGGCCTCGGGCGAGATGGCAGAGGGATCGCGGAGCCAGTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
||
CDS-3UTR CAA 90 bp | CCTTTTCCCACCAGGGCACGACTCCAGCAATCCCGCACGCTCCGCCTGACTCCTAAATCCACCTCGGGCTaGCTCAGAGCTCTCTTCCAG | + |
Preference number: 5 (lower is better) Translates to: PFPTRARLQQSRTLRLTPKSTSG*LRALFQ Trigger: CTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATTT...AGGAGTCAGGCGGAGCGTGCGGGATTGCTGGAGTCGTGCCCTGGTGGGAAAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
||
CDS-3UTR CAA 90 bp | CGGGGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGCAGGAGCAGACAGCATaGAAGGTGGAGCCCCTGAAG | + |
Preference number: 5 (lower is better) Translates to: RGPLVSWPAHFLPRPLLRQEQTA*KVEPLK Trigger: CTTCAGGGGCTCCACCTTCAATGCTGTCTGCTCCTG...CCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS CCA 90 bp | TGTCCTAGCCCCAGGGCTAAACCAGTGGTCATGGCGATGGGCGTCTaGGGAGAAGTGAACCATCCTCTTGTTACTGCCAGGGCCAGGAGC | + |
Preference number: 5 (lower is better) Translates to: CPSPRAKPVVMAMGV*GEVNHPLVTARARS Trigger: GCTCCTGGCCCTGGCAGTAACAAGAGGATGGTTCACTTCTCCCCAGACGCCCATCGCCATGACCACTGGTTTAGCCCTGGGGCTAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CAA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCTGGGTCATTGTCCTTTaGCTGGAGACGTCCTGCGGG | + |
Preference number: 5 (lower is better) Translates to: PTGCAPLCLSITYTHGWSWVIVL*LETSCG Trigger: CCCGCAGGACGTCTCCAGCAAAAGGACAATGACCCA...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | CGGGGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGTGTCTTCCCTCATCGTaGGTGAACAAGCCCGCGTCA | + |
Preference number: 5 (lower is better) Translates to: RGPLVSWPAHFLPRPLLRCLPSS*VNKPAS Trigger: TGACGCGGGCTTGTTCACCAACGATGAGGGAAGACA...CCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS TCA 90 bp | CCAGTGCAGAGACAAGATCGTGAACAAGCTCTTCCATTGTTCGACTaGAATGCCAGCTCTTCCCGGCGGCGGTTCCGATCGCTGGGCGCC | + |
Preference number: 5 (lower is better) Translates to: PVQRQDREQALPLFD*NASSSRRRFRSLGA Trigger: GGCGCCCAGCGATCGGAACCGCCGCCGGGAAGAGCTGGCATTTCAGTCGAACAATGGAAGAGCTTGTTCACGATCTTGTCTCTGCACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160481.8 |
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CDS GCA 90 bp | CATGGCGATGGGCGTCTGGGGAGAAGTGAACCATCCTCTTGTTACTaGCAGGGCCAGGAGCAGACAGCATTGAAGGTGGAGCCCCTGAAG | + |
Preference number: 5 (lower is better) Translates to: HGDGRLGRSEPSSCY*QGQEQTALKVEPLK Trigger: CTTCAGGGGCTCCACCTTCAATGCTGTCTGCTCCTGGCCCTGGCAGTAACAAGAGGATGGTTCACTTCTCCCCAGACGCCCATCGCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR CAA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCAAATCCACCTCGGGCTaGCTCAGAGCTCTCTTCCAG | + |
Preference number: 5 (lower is better) Translates to: PTGCAPLCLSITYTHGWSKSTSG*LRALFQ Trigger: CTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATTT...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | GTGTCCCTCCCGGGAAGAGGACAGGAGCCAGGTTCCTTCGAATGTCATTCCCCATGGGTCATTGTCCTTTaGCTGGAGACGTCCTGCGGG | + |
Preference number: 5 (lower is better) Translates to: VSLPGRGQEPGSFECHSPWVIVL*LETSCG Trigger: CCCGCAGGACGTCTCCAGCAAAAGGACAATGACCCA...TGGGGAATGACATTCGAAGGAACCTGGCTCCTGTCCTCTTCCCGGGAGGGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CAA 90 bp | GGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGAAACGCTGCTGCTTAGGTTaGAAGATGGCCTCCGCTTCG | + |
Preference number: 5 (lower is better) Translates to: GPLVSWPAHFLPRPLLRKRCCLG*KMASAS Trigger: CGAAGCGGAGGCCATCTTCAAACCTAAGCAGCAGCG...TTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CAA 90 bp | TCAAACACAGGGTCGGGCAGGTTGGTGTCCAGCTCTGCTGGCTCATCCTTTTCCCGCTGCTGCTTAGGTTaGAAGATGGCCTCCGCTTCG | + |
Preference number: 5 (lower is better) Translates to: SNTGSGRLVSSSAGSSFSRCCLG*KMASAS Trigger: CGAAGCGGAGGCCATCTTCAAACCTAAGCAGCAGCG...GGAAAAGGATGAGCCAGCAGAGCTGGACACCAACCTGCCCGACCCTGTGTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR CAA 90 bp | CAACAGAAACCGCAGGTTCTCTCTCTGCTCAGGCAGGGTTTCCTGATGTGGGGGTGGGTCATTGTCCTTTaGCTGGAGACGTCCTGCGGG | + |
Preference number: 5 (lower is better) Translates to: QQKPQVLSLLRQGFLMWGWVIVL*LETSCG Trigger: CCCGCAGGACGTCTCCAGCAAAAGGACAATGACCCA...CCCCCACATCAGGAAACCCTGCCTGAGCAGAGAGAGAACCTGCGGTTTCTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | GGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAGCGACTGAGTCTAGCTaGGAAACCTCCTCTGCCAGG | + |
Preference number: 5 (lower is better) Translates to: GPLVSWPAHFLPRPLLRKATESS*ETSSAR Trigger: CCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCGC...TTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CAA 90 bp | CACTTCAGTGTGTCCCTCCCGGGAAGAGGACAGGAGCCAGGTTCCTTCGAATGTAAATCCACCTCGGGCTaGCTCAGAGCTCTCTTCCAG | + |
Preference number: 5 (lower is better) Translates to: HFSVSLPGRGQEPGSFECKSTSG*LRALFQ Trigger: CTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATTT...ACATTCGAAGGAACCTGGCTCCTGTCCTCTTCCCGGGAGGGACACACTGAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CAA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCCTGCTCATCATCACCTaGTCTTCCCTCATCGTTGGT | + |
Preference number: 5 (lower is better) Translates to: PTGCAPLCLSITYTHGWSLLIIT*SSLIVG Trigger: ACCAACGATGAGGGAAGACAAGGTGATGATGAGCAG...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | CATCCTCTAGGGCAGGGTAAGGACACAGCAGCTGATTTCTCTGGAGACTGGAGCCAGGAGCAGACAGCATaGAAGGTGGAGCCCCTGAAG | + |
Preference number: 5 (lower is better) Translates to: HPLGQGKDTAADFSGDWSQEQTA*KVEPLK Trigger: CTTCAGGGGCTCCACCTTCAATGCTGTCTGCTCCTG...GCTCCAGTCTCCAGAGAAATCAGCTGCTGTGTCCTTACCCTGCCCTAGAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CAA 90 bp | CCCACTGGGTGTGCTCCACTGTGTCTGAGCATCACGTACACGCACGGATGGAGCTGGTGGGGGAGCTTTTaGGTAGAGGAAATCCAAGTC | + |
Preference number: 5 (lower is better) Translates to: PTGCAPLCLSITYTHGWSWWGSF*VEEIQV Trigger: GACTTGGATTTCCTCTACCAAAAAGCTCCCCCACCA...GCTCCATCCGTGCGTGTACGTGATGCTCAGACACAGTGGAGCACACCCAGTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CAA 90 bp | CATCCTCTAGGGCAGGGTAAGGACACAGCAGCTGATTTCTCTGGAGACTGGAGCAAATCCACCTCGGGCTaGCTCAGAGCTCTCTTCCAG | + |
Preference number: 5 (lower is better) Translates to: HPLGQGKDTAADFSGDWSKSTSG*LRALFQ Trigger: CTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATTT...GCTCCAGTCTCCAGAGAAATCAGCTGCTGTGTCCTTACCCTGCCCTAGAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CAA 90 bp | CATCCTCTAGGGCAGGGTAAGGACACAGCAGCTGATTTCTCTGGAGACTGGAGCCTGGCAGCTGGGTCATaGTCCTTTTGCTGGAGACGT | + |
Preference number: 5 (lower is better) Translates to: HPLGQGKDTAADFSGDWSLAAGS*SFCWRR Trigger: ACGTCTCCAGCAAAAGGACAATGACCCAGCTGCCAG...GCTCCAGTCTCCAGAGAAATCAGCTGCTGTGTCCTTACCCTGCCCTAGAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CAA 90 bp | TTCAGTGTGTCCCTCCCGGGAAGAGGACAGGAGCCAGGTTCCTTCGAATGTCATTGTCTTCCCTCATCGTaGGTGAACAAGCCCGCGTCA | + |
Preference number: 5 (lower is better) Translates to: FSVSLPGRGQEPGSFECHCLPSS*VNKPAS Trigger: TGACGCGGGCTTGTTCACCAACGATGAGGGAAGACA...ATGACATTCGAAGGAACCTGGCTCCTGTCCTCTTCCCGGGAGGGACACACTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CAA 90 bp | GCAGAACCTCTCAATCCTGTCTGTCCACCGCAAACTAACACGGCTGCAGTGCACTGTCTTCCCTCATCGTaGGTGAACAAGCCCGCGTCA | + |
Preference number: 5 (lower is better) Translates to: AEPLNPVCPPQTNTAAVHCLPSS*VNKPAS Trigger: TGACGCGGGCTTGTTCACCAACGATGAGGGAAGACA...GTGCACTGCAGCCGTGTTAGTTTGCGGTGGACAGACAGGATTGAGAGGTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 |
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CDS-3UTR CAA 90 bp | CTTCAGTGTGTCCCTCCCGGGAAGAGGACAGGAGCCAGGTTCCTTCGAATGTCATACTCCATCCTGTCCTaGTTGGGCTGGCTTCTTTCT | + |
Preference number: 5 (lower is better) Translates to: LQCVPPGKRTGARFLRMSYSILS*LGWLLS Trigger: AGAAAGAAGCCAGCCCAACAAGGACAGGATGGAGTA...TGACATTCGAAGGAACCTGGCTCCTGTCCTCTTCCCGGGAGGGACACACTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CAA 90 bp | GGTCCACTTGTGTCCTGGCCAGCCCACTTCTTACCACGGCCACTTCTCAGGAAATACTCCATCCTGTCCTaGTTGGGCTGGCTTCTTTCT | + |
Preference number: 5 (lower is better) Translates to: GPLVSWPAHFLPRPLLRKYSILS*LGWLLS Trigger: AGAAAGAAGCCAGCCCAACAAGGACAGGATGGAGTA...TTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTGGCCAGGACACAAGTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CAA 90 bp | GAGGGAAGGAGCCACTTAAGATACTCTCAAACACAGGGTCGGGCAGGTTGGTGTTGTCTTCCCTCATCGTaGGTGAACAAGCCCGCGTCA | + |
Preference number: 5 (lower is better) Translates to: EGRSHLRYSQTQGRAGWCCLPSS*VNKPAS Trigger: TGACGCGGGCTTGTTCACCAACGATGAGGGAAGACA...ACACCAACCTGCCCGACCCTGTGTTTGAGAGTATCTTAAGTGGCTCCTTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR CAA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGGCGACTGAGTCTAGCTaGGAAACCTCCTCTGCCAGG | + |
Preference number: 5 (lower is better) Translates to: SECLVPLFLLYLVSGLGQATESS*ETSSAR Trigger: CCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCGC...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR CAA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGCAGGAGCAGACAGCATaGAAGGTGGAGCCCCTGAAG | + |
Preference number: 5 (lower is better) Translates to: SECLVPLFLLYLVSGLGQQEQTA*KVEPLK Trigger: CTTCAGGGGCTCCACCTTCAATGCTGTCTGCTCCTG...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS TCA 90 bp | CCTCGGGCTTGCTCAGAGCTCTCTTCCAGTGCAGAGACAAGATCGTaGACAAGCTCTTCCATTGTTCGACTGAAATGCCAGCTCTTCCCG | + |
Preference number: 5 (lower is better) Translates to: PRACSELSSSAETRS*TSSSIVRLKCQLFP Trigger: CGGGAAGAGCTGGCATTTCAGTCGAACAATGGAAGAGCTTGTTCACGATCTTGTCTCTGCACTGGAAGAGAGCTCTGAGCAAGCCCGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | AGGGTCAACCTACATCCCAGGGAATCCTCCCAGTCAGTTTCACTTGAGGCTAAACGCTGCTGCTTAGGTTaGAAGATGGCCTCCGCTTCG | + |
Preference number: 5 (lower is better) Translates to: RVNLHPRESSQSVSLEAKRCCLG*KMASAS Trigger: CGAAGCGGAGGCCATCTTCAAACCTAAGCAGCAGCG...TTTAGCCTCAAGTGAAACTGACTGGGAGGATTCCCTGGGATGTAGGTTGACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CAA 90 bp | TGGAAACCTCCTCTGCCAGGATGGGACATGAGAGGGAAGGAGCCACTTAAGATACTGGCAGCTGGGTCATaGTCCTTTTGCTGGAGACGT | + |
Preference number: 5 (lower is better) Translates to: WKPPLPGWDMRGKEPLKILAAGS*SFCWRR Trigger: ACGTCTCCAGCAAAAGGACAATGACCCAGCTGCCAG...TATCTTAAGTGGCTCCTTCCCTCTCATGTCCCATCCTGGCAGAGGAGGTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR CAA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTGTCTTCCCTCATCGTaGGTGAACAAGCCCGCGTCA | + |
Preference number: 5 (lower is better) Translates to: SECLVPLFLLYLVSGLGQCLPSS*VNKPAS Trigger: TGACGCGGGCTTGTTCACCAACGATGAGGGAAGACA...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | CCGGGAAGAGGACAGGAGCCAGGTTCCTTCGAATGTCATTCCCCAGGTGTTCAACTGCTCATCATCACCTaGTCTTCCCTCATCGTTGGT | + |
Preference number: 5 (lower is better) Translates to: PGRGQEPGSFECHSPGVQLLIIT*SSLIVG Trigger: ACCAACGATGAGGGAAGACAAGGTGATGATGAGCAG...TTGAACACCTGGGGAATGACATTCGAAGGAACCTGGCTCCTGTCCTCTTCCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS CCA 90 bp | TCCGAGGCTTTCTGTTCCTCGTACTCCATCCTGTCCTTGTTGGGCTaGCTTCTTTCTTCACTCTCCAAAACTCCTCCTTCCTCCTGGGTT | + |
Preference number: 5 (lower is better) Translates to: SEAFCSSYSILSLLG*LLSSLSKTPPSSWV Trigger: AACCCAGGAGGAAGGAGGAGTTTTGGAGAGTGAAGAAAGAAGCCAGCCCAACAAGGACAGGATGGAGTACGAGGAACAGAAAGCCTCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |
||
CDS-3UTR CAA 90 bp | GAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTTAAAATCCACCTCGGGCTaGCTCAGAGCTCTCTTCCAG | + |
Preference number: 5 (lower is better) Translates to: ECLVPLFLLYLVSGLGQLKSTSG*LRALFQ Trigger: CTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATTT...TAACTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
||
CDS-3UTR CAA 90 bp | CAGCCCACTTCTTACCACGGCCACTTCTCAGGAAAGACAGTTCCTAGAAGAAATGCGACTGAGTCTAGCTaGGAAACCTCCTCTGCCAGG | + |
Preference number: 5 (lower is better) Translates to: QPTSYHGHFSGKTVPRRNATESS*ETSSAR Trigger: CCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCGC...ATTTCTTCTAGGAACTGTCTTTCCTGAGAAGTGGCCGTGGTAAGAAGTGGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
||
CDS-3UTR CAA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGCGCTGCTGCTTAGGTTaGAAGATGGCCTCCGCTTCG | + |
Preference number: 5 (lower is better) Translates to: SYKPSSEPKQREVSSLSKRCCLG*KMASAS Trigger: CGAAGCGGAGGCCATCTTCAAACCTAAGCAGCAGCG...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
||
CDS-3UTR CAA 90 bp | AACCTACATCCCAGGGAATCCTCCCAGTCAGTTTCACTTGAGGCTAAAAGAGAGCTGGCAGCTGGGTCATaGTCCTTTTGCTGGAGACGT | + |
Preference number: 5 (lower is better) Translates to: NLHPRESSQSVSLEAKRELAAGS*SFCWRR Trigger: ACGTCTCCAGCAAAAGGACAATGACCCAGCTGCCAG...CTCTCTTTTAGCCTCAAGTGAAACTGACTGGGAGGATTCCCTGGGATGTAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
||
CDS-3UTR CAA 90 bp | TGGAAACCTCCTCTGCCAGGATGGGACATGAGAGGGAAGGAGCCACTTAAGATATACTCCATCCTGTCCTaGTTGGGCTGGCTTCTTTCT | + |
Preference number: 5 (lower is better) Translates to: WKPPLPGWDMRGKEPLKIYSILS*LGWLLS Trigger: AGAAAGAAGCCAGCCCAACAAGGACAGGATGGAGTA...TATCTTAAGTGGCTCCTTCCCTCTCATGTCCCATCCTGGCAGAGGAGGTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR CAA 90 bp | TCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTACTCCATCCTGTCCTaGTTGGGCTGGCTTCTTTCT | + |
Preference number: 5 (lower is better) Translates to: SECLVPLFLLYLVSGLGQYSILS*LGWLLS Trigger: AGAAAGAAGCCAGCCCAACAAGGACAGGATGGAGTA...CTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGGCGACTGAGTCTAGCTaGGAAACCTCCTCTGCCAGG | + |
Preference number: 5 (lower is better) Translates to: SYKPSSEPKQREVSSLSKATESS*ETSSAR Trigger: CCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCGC...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS-3UTR CAA 90 bp | TGTCCTAGCCCCAGGGCTAAACCAGTGGCCAGTAAATTGTTTCCTAAAAGGATTCAGGAGCAGACAGCATaGAAGGTGGAGCCCCTGAAG | + |
Preference number: 5 (lower is better) Translates to: CPSPRAKPVASKLFPKRIQEQTA*KVEPLK Trigger: CTTCAGGGGCTCCACCTTCAATGCTGTCTGCTCCTG...AATCCTTTTAGGAAACAATTTACTGGCCACTGGTTTAGCCCTGGGGCTAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | ACGTCACATCTTGCTGCTCTTTATAAGGACTTGAATGCTGAAGGGTACCTGTGGCAGGAGCAGACAGCATaGAAGGTGGAGCCCCTGAAG | + |
Preference number: 5 (lower is better) Translates to: TSHLAALYKDLNAEGYLWQEQTA*KVEPLK Trigger: CTTCAGGGGCTCCACCTTCAATGCTGTCTGCTCCTG...CCACAGGTACCCTTCAGCATTCAAGTCCTTATAAAGAGCAGCAAGATGTGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CAA 90 bp | TTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTTGGGTCATTGTCCTTTaGCTGGAGACGTCCTGCGGG | + |
Preference number: 5 (lower is better) Translates to: FSIRMPGPSVPSVLGKWVWVIVL*LETSCG Trigger: CCCGCAGGACGTCTCCAGCAAAAGGACAATGACCCA...AACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGAGGGAGCAGCTTTTCTaGTGTCCTCTTTCCGCTCGG | + |
Preference number: 5 (lower is better) Translates to: SYKPSSEPKQREVSSLSKREQLF*CPLSAR Trigger: CCGAGCGGAAAGAGGACACAAGAAAAGCTGCTCCCT...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS CCA 90 bp | CTGCTGCTTAGGTTTGAAGATGGCCTCCGCTTCGCCACTAACATCTaGTCATCAGAGTCACTGCGGTCCTTTTTATTATTGCTGTGCTTC | + |
Preference number: 5 (lower is better) Translates to: LLLRFEDGLRFATNI*SSESLRSFLLLLCF Trigger: GAAGCACAGCAATAATAAAAAGGACCGCAGTGACTCTGATGACCAGATGTTAGTGGCGAAGCGGAGGCCATCTTCAAACCTAAGCAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | ACTAAGTGTTTAGTATCAGAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTATGGGTCATTGTCCTTTaGCTGGAGACGTCCTGCGGG | + |
Preference number: 5 (lower is better) Translates to: TKCLVSECLVPLFLLYLVWVIVL*LETSCG Trigger: CCCGCAGGACGTCTCCAGCAAAAGGACAATGACCCA...TACCAAGTACAGAAGGAACAGAGGGACCAGGCATTCTGATACTAAACACTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | CCTACCATTGAAGGTGGAGCCCCTGAAGACTTTTTAATATTCTTTGAAGGCGTTTGGGTCATTGTCCTTTaGCTGGAGACGTCCTGCGGG | + |
Preference number: 5 (lower is better) Translates to: PTIEGGAPEDFLIFFEGVWVIVL*LETSCG Trigger: CCCGCAGGACGTCTCCAGCAAAAGGACAATGACCCA...AACGCCTTCAAAGAATATTAAAAAGTCTTCAGGGGCTCCACCTTCAATGGTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159748.8 |
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CDS-3UTR CAA 90 bp | GGAGCCAGGTTCCTTCGAATGTCATTCCCCAGGTGTTCAAATGTAACTAATTTAGCGACTGAGTCTAGCTaGGAAACCTCCTCTGCCAGG | + |
Preference number: 5 (lower is better) Translates to: GARFLRMSFPRCSNVTNLATESS*ETSSAR Trigger: CCTGGCAGAGGAGGTTTCCAAGCTAGACTCAGTCGC...TAAATTAGTTACATTTGAACACCTGGGGAATGACATTCGAAGGAACCTGGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044812.12 |
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CDS-3UTR CAA 90 bp | GAATGCCTGGTCCCTCTGTTCCTTCTGTACTTGGTAAGTGGGTTAGGCCAGTTAATCCTAAATGCATGCTaGTCTGCCTGCTGGCTGTTT | + |
Preference number: 5 (lower is better) Translates to: ECLVPLFLLYLVSGLGQLILNAC*SACWLF Trigger: AAACAGCCAGCAGGCAGACAAGCATGCATTTAGGAT...TAACTGGCCTAACCCACTTACCAAGTACAGAAGGAACAGAGGGACCAGGCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CAA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGCGCTGCTGCTTAGGTTaGAAGATGGCCTCCGCTTCG | + |
Preference number: 5 (lower is better) Translates to: RISDLMERTTEWNGRNIVRCCLG*KMASAS Trigger: CGAAGCGGAGGCCATCTTCAAACCTAAGCAGCAGCG...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | ACGTCACATCTTGCTGCTCTTTATAAGGACTTGAATGCTGAAGGGTACCTGTGGCTGCTCATCATCACCTaGTCTTCCCTCATCGTTGGT | + |
Preference number: 5 (lower is better) Translates to: TSHLAALYKDLNAEGYLWLLIIT*SSLIVG Trigger: ACCAACGATGAGGGAAGACAAGGTGATGATGAGCAG...CCACAGGTACCCTTCAGCATTCAAGTCCTTATAAAGAGCAGCAAGATGTGACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS GCA 90 bp | AAGATGGCCTCCGCTTCGCCACTAACATCTGGTCATCAGAGTCACTaGGGTCCTTTTTATTATTGCTGTGCTTCTCTCTATAGTCCTTAC | + |
Preference number: 5 (lower is better) Translates to: KMASASPLTSGHQSH*GPFYYCCASLYSPY Trigger: GTAAGGACTATAGAGAGAAGCACAGCAATAATAAAAAGGACCGCAGTGACTCTGATGACCAGATGTTAGTGGCGAAGCGGAGGCCATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | CTTAGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATACGCTGCTGCTTAGGTTaGAAGATGGCCTCCGCTTCG | + |
Preference number: 5 (lower is better) Translates to: LRISDLMERTTEWNGRNIRCCLG*KMASAS Trigger: CGAAGCGGAGGCCATCTTCAAACCTAAGCAGCAGCG...TATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | AGAAAGACAGCTATTAAAAATGGCAGTTTACTAGTCACGAGCTTGTTCCAGCAGCTGGCAGCTGGGTCATaGTCCTTTTGCTGGAGACGT | + |
Preference number: 5 (lower is better) Translates to: RKTAIKNGSLLVTSLFQQLAAGS*SFCWRR Trigger: ACGTCTCCAGCAAAAGGACAATGACCCAGCTGCCAG...CTGCTGGAACAAGCTCGTGACTAGTAAACTGCCATTTTTAATAGCTGTCTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CAA 90 bp | ATAAGAGACCAACTATTCTTCATGTCTAGAAACTGCTGGAAACCGAGGAAACACCTGGCAGCTGGGTCATaGTCCTTTTGCTGGAGACGT | + |
Preference number: 5 (lower is better) Translates to: IRDQLFFMSRNCWKPRKHLAAGS*SFCWRR Trigger: ACGTCTCCAGCAAAAGGACAATGACCCAGCTGCCAG...GTGTTTCCTCGGTTTCCAGCAGTTTCTAGACATGAAGAATAGTTGGTCTCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | ATAAGAGACCAACTATTCTTCATGTCTAGAAACTGCTGGAAACCGAGGAAACACAGGGAGCAGCTTTTCTaGTGTCCTCTTTCCGCTCGG | + |
Preference number: 5 (lower is better) Translates to: IRDQLFFMSRNCWKPRKHREQLF*CPLSAR Trigger: CCGAGCGGAAAGAGGACACAAGAAAAGCTGCTCCCT...GTGTTTCCTCGGTTTCCAGCAGTTTCTAGACATGAAGAATAGTTGGTCTCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CAA 90 bp | AGTTACAAACCCTCATCAGAGCCAAAGCAAAGGGAAGTGAGCTCACTAAGCAAGATCCTAAATGCATGCTaGTCTGCCTGCTGGCTGTTT | + |
Preference number: 5 (lower is better) Translates to: SYKPSSEPKQREVSSLSKILNAC*SACWLF Trigger: AAACAGCCAGCAGGCAGACAAGCATGCATTTAGGAT...CTTGCTTAGTGAGCTCACTTCCCTTTGCTTTGGCTCTGATGAGGGTTTGTAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CAA 90 bp | GAAATGAAACTCAAAGAAGAGCAAACAAGTTTGGAAAAGACCCTTGAGTCCAGTCTGGCAGCTGGGTCATaGTCCTTTTGCTGGAGACGT | + |
Preference number: 5 (lower is better) Translates to: EMKLKEEQTSLEKTLESSLAAGS*SFCWRR Trigger: ACGTCTCCAGCAAAAGGACAATGACCCAGCTGCCAG...ACTGGACTCAAGGGTCTTTTCCAAACTTGTTTGCTCTTCTTTGAGTTTCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CAA 90 bp | CCTCCTAGGGCTTTACAAGACCATCAAGAAATGAAACTCAAAGAAGAGCAAACATACTCCATCCTGTCCTaGTTGGGCTGGCTTCTTTCT | + |
Preference number: 5 (lower is better) Translates to: PPRALQDHQEMKLKEEQTYSILS*LGWLLS Trigger: AGAAAGAAGCCAGCCCAACAAGGACAGGATGGAGTA...TGTTTGCTCTTCTTTGAGTTTCATTTCTTGATGGTCTTGTAAAGCCCTAGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CAA 90 bp | ATAAGAGACCAACTATTCTTCATGTCTAGAAACTGCTGGAAACCGAGGAAACACCTGCTCATCATCACCTaGTCTTCCCTCATCGTTGGT | + |
Preference number: 5 (lower is better) Translates to: IRDQLFFMSRNCWKPRKHLLIIT*SSLIVG Trigger: ACCAACGATGAGGGAAGACAAGGTGATGATGAGCAG...GTGTTTCCTCGGTTTCCAGCAGTTTCTAGACATGAAGAATAGTTGGTCTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS-3UTR CAA 90 bp | AGAATTTCTGACCTTATGGAGAGAACGACAGAATGGAATGGAAGGAACATAGTGTGGTGGGGGAGCTTTTaGGTAGAGGAAATCCAAGTC | + |
Preference number: 5 (lower is better) Translates to: RISDLMERTTEWNGRNIVWWGSF*VEEIQV Trigger: GACTTGGATTTCCTCTACCAAAAAGCTCCCCCACCA...CACTATGTTCCTTCCATTCCATTCTGTCGTTCTCTCCATAAGGTCAGAAATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CAA 90 bp | GAAATGAAACTCAAAGAAGAGCAAACAAGTTTGGAAAAGACCCTTGAGTCCAGTTACTCCATCCTGTCCTaGTTGGGCTGGCTTCTTTCT | + |
Preference number: 5 (lower is better) Translates to: EMKLKEEQTSLEKTLESSYSILS*LGWLLS Trigger: AGAAAGAAGCCAGCCCAACAAGGACAGGATGGAGTA...ACTGGACTCAAGGGTCTTTTCCAAACTTGTTTGCTCTTCTTTGAGTTTCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 |
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CDS-3UTR CAA 90 bp | ATAAGAGACCAACTATTCTTCATGTCTAGAAACTGCTGGAAACCGAGGAAACACATCCTAAATGCATGCTaGTCTGCCTGCTGGCTGTTT | + |
Preference number: 5 (lower is better) Translates to: IRDQLFFMSRNCWKPRKHILNAC*SACWLF Trigger: AAACAGCCAGCAGGCAGACAAGCATGCATTTAGGAT...GTGTTTCCTCGGTTTCCAGCAGTTTCTAGACATGAAGAATAGTTGGTCTCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065573.14 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS-3UTR CAA 90 bp | GAAATGAAACTCAAAGAAGAGCAAACAAGTTTGGAAAAGACCCTTGAGTCCAGTTGGTGGGGGAGCTTTTaGGTAGAGGAAATCCAAGTC | + |
Preference number: 5 (lower is better) Translates to: EMKLKEEQTSLEKTLESSWWGSF*VEEIQV Trigger: GACTTGGATTTCCTCTACCAAAAAGCTCCCCCACCA...ACTGGACTCAAGGGTCTTTTCCAAACTTGTTTGCTCTTCTTTGAGTTTCATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160570.2 |
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CDS GCA 72 bp | GGGCGTCTGGGGAGAAGTGAACCATCCTCTTGTTACTaGCAGGGCCAGGAGCAGACAGCATTGAAGGTGGAG | + |
Preference number: 6 (lower is better) Translates to: GRLGRSEPSSCY*QGQEQTALKVE Trigger: CTCCACCTTCAATGCTGTCTGCTCCTGGCCCTGGCAGTAACAAGAGGATGGTTCACTTCTCCCCAGACGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 ENSMUST00000160570.2 |
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CDS CAA 90 bp | ACTCGTGCCACAGAAGCCGCTTACCTCGAACGCTGCTGCTTAGGTTaGAAGATGGCCTCCGCTTCGCCACTAACATCTGGTCATCAGAGT | + |
Preference number: 6 (lower is better) Translates to: TRATEAAYLERCCLG*KMASASPLTSGHQS Trigger: ACTCTGATGACCAGATGTTAGTGGCGAAGCGGAGGCCATCTTCAAACCTAAGCAGCAGCGTTCGAGGTAAGCGGCTTCTGTGGCACGAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS TCA 72 bp | AGACAAGATCGTGAACAAGCTCTTCCATTGTTCGACTaGAATGCCAGCTCTTCCCGGCGGCGGTTCCGATCG | + |
Preference number: 6 (lower is better) Translates to: RQDREQALPLFD*NASSSRRRFRS Trigger: CGATCGGAACCGCCGCCGGGAAGAGCTGGCATTTCAGTCGAACAATGGAAGAGCTTGTTCACGATCTTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160481.8 |
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CDS CAA 72 bp | TCACTCTGCTCATCATCACCTTGTCTTCCCTCATCGTaGGTGAACAAGCCCGCGTCAGTGCTGCTGAGACTG | + |
Preference number: 6 (lower is better) Translates to: SLCSSSPCLPSS*VNKPASVLLRL Trigger: CAGTCTCAGCAGCACTGACGCGGGCTTGTTCACCAACGATGAGGGAAGACAAGGTGATGATGAGCAGAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS CAA 90 bp | AGCTCATCCGAGGCTTTCTGTTCCTCGTACTCCATCCTGTCCTTGTaGGGCTGGCTTCTTTCTTCACTCTCCAAAACTCCTCCTTCCTCC | + |
Preference number: 6 (lower is better) Translates to: SSSEAFCSSYSILSL*GWLLSSLSKTPPSS Trigger: GGAGGAAGGAGGAGTTTTGGAGAGTGAAGAAAGAAGCCAGCCCAACAAGGACAGGATGGAGTACGAGGAACAGAAAGCCTCGGATGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS CAA 90 bp | CTGAGCTCATCCGAGGCTTTCTGTTCCTCGTACTCCATCCTGTCCTaGTTGGGCTGGCTTCTTTCTTCACTCTCCAAAACTCCTCCTTCC | + |
Preference number: 6 (lower is better) Translates to: LSSSEAFCSSYSILS*LGWLLSSLSKTPPS Trigger: GGAAGGAGGAGTTTTGGAGAGTGAAGAAAGAAGCCAGCCCAACAAGGACAGGATGGAGTACGAGGAACAGAAAGCCTCGGATGAGCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS GCA 72 bp | GAATGTTCTCCAGTTTCAGCAAATCCACCTCGGGCTTaGTCAGAGCTCTCTTCCAGTGCAGAGACAAGATCG | + |
Preference number: 6 (lower is better) Translates to: ECSPVSANPPRA*SELSSSAETRS Trigger: CGATCTTGTCTCTGCACTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATTTGCTGAAACTGGAGAACATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS GCA 72 bp | AAATCCACCTCGGGCTTGCTCAGAGCTCTCTTCCAGTaGAGAGACAAGATCGTGAACAAGCTCTTCCATTGT | + |
Preference number: 6 (lower is better) Translates to: KSTSGLLRALFQ*RDKIVNKLFHC Trigger: ACAATGGAAGAGCTTGTTCACGATCTTGTCTCTGCACTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160481.8 |
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CDS CCA 72 bp | TTCTGTTCCTCGTACTCCATCCTGTCCTTGTTGGGCTaGCTTCTTTCTTCACTCTCCAAAACTCCTCCTTCC | + |
Preference number: 6 (lower is better) Translates to: FCSSYSILSLLG*LLSSLSKTPPS Trigger: GGAAGGAGGAGTTTTGGAGAGTGAAGAAAGAAGCCAGCCCAACAAGGACAGGATGGAGTACGAGGAACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS CCA 72 bp | AGGCTTTCTGTTCCTCGTACTCCATCCTGTCCTTGTTaGGCTGGCTTCTTTCTTCACTCTCCAAAACTCCTC | + |
Preference number: 6 (lower is better) Translates to: RLSVPRTPSCPC*AGFFLHSPKLL Trigger: GAGGAGTTTTGGAGAGTGAAGAAAGAAGCCAGCCCAACAAGGACAGGATGGAGTACGAGGAACAGAAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS CAA 72 bp | AGAATGTTCTCCAGTTTCAGCAAATCCACCTCGGGCTaGCTCAGAGCTCTCTTCCAGTGCAGAGACAAGATC | + |
Preference number: 6 (lower is better) Translates to: RMFSSFSKSTSG*LRALFQCRDKI Trigger: GATCTTGTCTCTGCACTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATTTGCTGAAACTGGAGAACATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS CAA 90 bp | CAGATTTCGAGAATGTTCTCCAGTTTCAGCAAATCCACCTCGGGCTaGCTCAGAGCTCTCTTCCAGTGCAGAGACAAGATCGTGAACAAG | + |
Preference number: 6 (lower is better) Translates to: QISRMFSSFSKSTSG*LRALFQCRDKIVNK Trigger: CTTGTTCACGATCTTGTCTCTGCACTGGAAGAGAGCTCTGAGCAAGCCCGAGGTGGATTTGCTGAAACTGGAGAACATTCTCGAAATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS TCA 72 bp | TGCTCAGAGCTCTCTTCCAGTGCAGAGACAAGATCGTaGACAAGCTCTTCCATTGTTCGACTGAAATGCCAG | + |
Preference number: 6 (lower is better) Translates to: CSELSSSAETRS*TSSSIVRLKCQ Trigger: CTGGCATTTCAGTCGAACAATGGAAGAGCTTGTTCACGATCTTGTCTCTGCACTGGAAGAGAGCTCTGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160481.8 |
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CDS CCA 72 bp | AGGTTTGAAGATGGCCTCCGCTTCGCCACTAACATCTaGTCATCAGAGTCACTGCGGTCCTTTTTATTATTG | + |
Preference number: 6 (lower is better) Translates to: RFEDGLRFATNI*SSESLRSFLLL Trigger: CAATAATAAAAAGGACCGCAGTGACTCTGATGACCAGATGTTAGTGGCGAAGCGGAGGCCATCTTCAAACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS GCA 72 bp | TCCGCTTCGCCACTAACATCTGGTCATCAGAGTCACTaGGGTCCTTTTTATTATTGCTGTGCTTCTCTCTAT | + |
Preference number: 6 (lower is better) Translates to: SASPLTSGHQSH*GPFYYCCASLY Trigger: ATAGAGAGAAGCACAGCAATAATAAAAAGGACCGCAGTGACTCTGATGACCAGATGTTAGTGGCGAAGCGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |
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CDS GCA 72 bp | TCTGGTCATCAGAGTCACTGCGGTCCTTTTTATTATTaGTGTGCTTCTCTCTATAGTCCTTACTTGGTTCTT | + |
Preference number: 6 (lower is better) Translates to: SGHQSHCGPFYY*CASLYSPYLVL Trigger: AAGAACCAAGTAAGGACTATAGAGAGAAGCACAGCAATAATAAAAAGGACCGCAGTGACTCTGATGACCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000044812.12 ENSMUST00000065573.14 ENSMUST00000110943.9 ENSMUST00000159748.8 ENSMUST00000160471.8 ENSMUST00000160481.8 |