Pregenerated sensors for GPATCH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063808Ensembl transcript IDs: ENSMUST00000079693.12, ENSMUST00000131143.2, ENSMUST00000131213.8
Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCATGAGCTGTGGCCCAGGTCTGGTGTGGACGCCTGCGCTCTGCTaGTTGAAGCACTCTGGGCCAGACTCCTGGCCTTGGCTTGGGCGG | + |
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Preference number: 1 (lower is better) Translates to: AMSCGPGLVWTPALC*LKHSGPDSWPWLGR Trigger: CCGCCCAAGCCAAGGCCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCCACAGCTCATGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CCA 90 bp | CTGGTGGTGACTGTCCCTCCGCCCAGGGCCAGGTGCCATGAGCTGTaGCCCAGGTCTGGTGTGGACGCCTGCGCTCTGCTGCTTGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: LVVTVPPPRARCHEL*PRSGVDACALLLEA Trigger: TGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCCACAGCTCATGGCACCTGGCCCTGGGCGGAGGGACAGTCACCACCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR GCA 90 bp | GGTGCCATGAGCTGTGGCCCAGGTCTGGTGTGGACGCCTGCGCTCTaGTGCTTGAAGCACTCTGGGCCAGACTCCTGGCCTTGGCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: GAMSCGPGLVWTPAL*CLKHSGPDSWPWLG Trigger: CCCAAGCCAAGGCCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCCACAGCTCATGGCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR GCA 90 bp | AGGGCCAGGTGCCATGAGCTGTGGCCCAGGTCTGGTGTGGACGCCTaGGCTCTGCTGCTTGAAGCACTCTGGGCCAGACTCCTGGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: RARCHELWPRSGVDA*ALLLEALWARLLAL Trigger: CAAGGCCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCCACAGCTCATGGCACCTGGCCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR GCA 90 bp | CGGTGTGATGAGGTCATCAAGCAGCGTGGCGCCGGGAATAGGGGCTaGAGCAGCGGCCAGCTGCCTGGCCTTCTCCCGGATTCTGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: RCDEVIKQRGAGNRG*SSGQLPGLLPDSVF Trigger: AAAGACAGAATCCGGGAGAAGGCCAGGCAGCTGGCCGCTGCTGCAGCCCCTATTCCCGGCGCCACGCTGCTTGATGACCTCATCACACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR GCA 90 bp | GAACCTGGAGGACAGGGTGGAGTTGGAGGACACATAGAGCTGGGCTaGCCGGGCAAACTCTTCCCGCTCTCGGCTTCGCTCCCACTCGGT | + |
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Preference number: 1 (lower is better) Translates to: EPGGQGGVGGHIELG*PGKLFPLSASLPLG Trigger: ACCGAGTGGGAGCGAAGCCGAGAGCGGGAAGAGTTTGCCCGGGCAGCCCAGCTCTATGTGTCCTCCAACTCCACCCTGTCCTCCAGGTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CCA 90 bp | CCCAGGTCTGGTGTGGACGCCTGCGCTCTGCTGCTTGAAGCACTCTaGGCCAGACTCCTGGCCTTGGCTTGGGCGGCTTTCAGGTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: PRSGVDACALLLEAL*ARLLALAWAAFRSV Trigger: AACTGACCTGAAAGCCGCCCAAGCCAAGGCCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAGACCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR GCA 90 bp | CCCGGGCAAACTCTTCCCGCTCTCGGCTTCGCTCCCACTCGGTCATaGTGGGGTCCAGGCATCGTTCCAGAGCATCTTTCTGACCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: PGQTLPALGFAPTRS*WGPGIVPEHLSDPS Trigger: AGAAGGGTCAGAAAGATGCTCTGGAACGATGCCTGGACCCCAGCATGACCGAGTGGGAGCGAAGCCGAGAGCGGGAAGAGTTTGCCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CCA 90 bp | TGGACGCCTGCGCTCTGCTGCTTGAAGCACTCTGGGCCAGACTCCTaGCCTTGGCTTGGGCGGCTTTCAGGTCAGTTGCCTGCTTCACTT | + |
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Preference number: 1 (lower is better) Translates to: WTPALCCLKHSGPDS*PWLGRLSGQLPASL Trigger: AAGTGAAGCAGGCAACTGACCTGAAAGCCGCCCAAGCCAAGGCCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CCA 90 bp | GCCGAGGCCCGAACTCTTCCCGTTCGTCAATCTGTGCCTTTTGGATaGGGAAGGGGGTTGCAGGCTCACAAGGCTCCGGCTCAGCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: AEARTLPVRQSVPFG*GRGLQAHKAPAQQQ Trigger: TTGCTGCTGAGCCGGAGCCTTGTGAGCCTGCAACCCCCTTCCCCATCCAAAAGGCACAGATTGACGAACGGGAAGAGTTCGGGCCTCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CCA 90 bp | GGGCAAACTCTTCCCGCTCTCGGCTTCGCTCCCACTCGGTCATGCTaGGGTCCAGGCATCGTTCCAGAGCATCTTTCTGACCCTTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: GQTLPALGFAPTRSC*GPGIVPEHLSDPSS Trigger: TGAAGAAGGGTCAGAAAGATGCTCTGGAACGATGCCTGGACCCCAGCATGACCGAGTGGGAGCGAAGCCGAGAGCGGGAAGAGTTTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR TCA 90 bp | GAGGGACTTCGACCTGATCTGAATCCTCCTCCTCCTTGGCGTGAGTaGACCTGGAGGACAGGGTGGAGTTGGAGGACACATAGAGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: EGLRPDLNPPPPWRE*TWRTGWSWRTHRAG Trigger: CCCAGCTCTATGTGTCCTCCAACTCCACCCTGTCCTCCAGGTTCACTCACGCCAAGGAGGAGGAGGATTCAGATCAGGTCGAAGTCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR GCA 90 bp | GGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTCCATTATTaGCTTCTTAGGGGGAGACACTTCAGTCTTGCACCAGGTTCCACT | + |
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Preference number: 1 (lower is better) Translates to: GGTSRLRQARAGLHY*LLRGRHFSLAPGST Trigger: AGTGGAACCTGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
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| 3UTR GCA 90 bp | GTGTCTCGGGTGAGCTTCCCGAACATCTTCATCTTCACAGCCGACTaGTTGTCACTGACATCGTTCTCTTGGTCCCGAGGGACTTCGACC | + |
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Preference number: 1 (lower is better) Translates to: VSRVSFPNIFIFTAD*LSLTSFSWSRGTST Trigger: GGTCGAAGTCCCTCGGGACCAAGAGAACGATGTCAGTGACAAGCAGTCGGCTGTGAAGATGAAGATGTTCGGGAAGCTCACCCGAGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CCA 90 bp | TCTTGGGTTTCTCTTTTTGAGGTATCTCGAGTTTCTGGCGAGAGTTaGGGCAGAAGACAGGAGGCAGCCGAGGCCCGAACTCTTCCCGTT | + |
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Preference number: 1 (lower is better) Translates to: SWVSLFEVSRVSGES*GRRQEAAEARTLPV Trigger: AACGGGAAGAGTTCGGGCCTCGGCTGCCTCCTGTCTTCTGCCCCAACTCTCGCCAGAAACTCGAGATACCTCAAAAAGAGAAACCCAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR TCA 90 bp | TCTTACACAGAAGCTTGTCGGGGTGCCACTCAAACGTGTCTCGGGTaGGCTTCCCGAACATCTTCATCTTCACAGCCGACTGCTTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: SYTEACRGATQTCLG*ASRTSSSSQPTACH Trigger: GTGACAAGCAGTCGGCTGTGAAGATGAAGATGTTCGGGAAGCTCACCCGAGACACGTTTGAGTGGCACCCCGACAAGCTTCTGTGTAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR GCA 90 bp | GTCATCATCTTCATCCTCAGACTCTTCAGAGCCTCCAGGCGGCAATaGACAGCCATAGATCTTCACACCAGGATCTGGTTTCTGTCGGCG | + |
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Preference number: 1 (lower is better) Translates to: VIIFILRLFRASRRQ*TAIDLHTRIWFLSA Trigger: CGCCGACAGAAACCAGATCCTGGTGTGAAGATCTATGGCTGTGCATTGCCGCCTGGAGGCTCTGAAGAGTCTGAGGATGAAGATGATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR TCA 90 bp | CCGAAGATGAGGACTTTTCATCAGAGGAACTGGCGAAGATGGCTTTaGATAAATCCATGGAAGGGCGGCTACCTTCCCCGTCCGTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: PKMRTFHQRNWRRWL*INPWKGGYLPRPSV Trigger: CACAGACGGACGGGGAAGGTAGCCGCCCTTCCATGGATTTATTCAAAGCCATCTTCGCCAGTTCCTCTGATGAAAAGTCCTCATCTTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR GCA 90 bp | GGTTTCTGTCGGCGCGCCTTTCTCTTCACCCGAGGGCCGACTCCTTaGCCTTCCTTCCAACCCATTTTTCTTAACAATTCAAAGCCAACA | + |
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Preference number: 1 (lower is better) Translates to: GFCRRAFLFTRGPTP*PSFQPIFLNNSKPT Trigger: TGTTGGCTTTGAATTGTTAAGAAAAATGGGTTGGAAGGAAGGGCAAGGAGTCGGCCCTCGGGTGAAGAGAAAGGCGCGCCGACAGAAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR GCA 90 bp | TGCGCCACCAAAAAGATTCAGGTGTTCTCCTGGCATTCCAAACAATaGTTGGTGGGGGTCCAGGCCCTTGTAGGCCAACCCATGTACATT | + |
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Preference number: 1 (lower is better) Translates to: CATKKIQVFSWHSKQ*LVGVQALVGQPMYI Trigger: AATGTACATGGGTTGGCCTACAAGGGCCTGGACCCCCACCAAGCATTGTTTGGAATGCCAGGAGAACACCTGAATCTTTTTGGTGGCGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR GCA 90 bp | CTGGGCCAGACTCCTGGCCTTGGCTTGGGCGGCTTTCAGGTCAGTTaGCTGCTTCACTTCTTTAATTCTCTCTTTGTCTTTTTGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: LGQTPGLGLGGFQVS*LLHFFNSLFVFLRQ Trigger: CTGTCTCAAAAAGACAAAGAGAGAATTAAAGAAGTGAAGCAGGCAACTGACCTGAAAGCCGCCCAAGCCAAGGCCAGGAGTCTGGCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CCA 90 bp | GCTCCTCGTCCTTCAGCACAGTGTCATACTTGGATAGAGTTTCTGTaGCGTAGATGTCATCATCTTCCTCTTCCAGGGCACCTACACCAA | + |
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Preference number: 1 (lower is better) Translates to: APRPSAQCHTWIEFL*RRCHHLPLPGHLHQ Trigger: TTGGTGTAGGTGCCCTGGAAGAGGAAGATGATGACATCTACGCCACAGAAACTCTATCCAAGTATGACACTGTGCTGAAGGACGAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CCA 90 bp | AGAGGCCATCTCCAGGCTCCTCGTCCTTCAGCACAGTGTCATACTTaGATAGAGTTTCTGTGGCGTAGATGTCATCATCTTCCTCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: RGHLQAPRPSAQCHT*IEFLWRRCHHLPLP Trigger: TGGAAGAGGAAGATGATGACATCTACGCCACAGAAACTCTATCCAAGTATGACACTGTGCTGAAGGACGAGGAGCCTGGAGATGGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CCA 90 bp | CATATCGAAGATCTCTCTCGGGTTCTTTCTGATTTTTGTATTGTTTaGGAGCTGTCCAGCCATAGAGGCCATCTCCAGGCTCCTCGTCCT | + |
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Preference number: 1 (lower is better) Translates to: HIEDLSRVLSDFCIV*ELSSHRGHLQAPRP Trigger: AGGACGAGGAGCCTGGAGATGGCCTCTATGGCTGGACAGCTCCCAAACAATACAAAAATCAGAAAGAACCCGAGAGAGATCTTCGATATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CAA 90 bp | ATGAGCTGTGGCCCAGGTCTGGTGTGGACGCCTGCGCTCTGCTGCTaGAAGCACTCTGGGCCAGACTCCTGGCCTTGGCTTGGGCGGCTT | + |
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Preference number: 2 (lower is better) Translates to: MSCGPGLVWTPALCC*KHSGPDSWPWLGRL Trigger: AAGCCGCCCAAGCCAAGGCCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCCACAGCTCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCCCAGGTCTGGTGTGGACGCCTGCGCTCTGCTGCTTGAAGCACTCTGGCCAGACTCCTGGCCTTaGCTTGGGCGGCTTTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LWPRSGVDACALLLEALWPDSWP*LGRLSG Trigger: ACCTGAAAGCCGCCCAAGCCAAGGCCAGGAGTCTGG...CCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCCACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CAA 90 bp | AGGCAGCCGAGGCCCGAACTCTTCCCGTTCGTCAATCTGTGCCTTTaGGATGGGGAAGGGGGTTGCAGGCTCACAAGGCTCCGGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: RQPRPELFPFVNLCL*DGEGGCRLTRLRLS Trigger: GCTGAGCCGGAGCCTTGTGAGCCTGCAACCCCCTTCCCCATCCAAAAGGCACAGATTGACGAACGGGAAGAGTTCGGGCCTCGGCTGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR CCA 90 bp | CCACTCGGTCATGCTGGGGTCCAGGCATCGTTCCAGAGCATCTTTCTGACCCTTGGCCCAGGTCTGGTGTaGACGCCTGCGCTCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: PLGHAGVQASFQSIFLTLGPGLV*TPALCC Trigger: GCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCC...AAGGGTCAGAAAGATGCTCTGGAACGATGCCTGGACCCCAGCATGACCGAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR TCA 90 bp | GACAGGCCAGGGCAGGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCGAGGAACCTCCAGACTaGGACAGGCCAGGGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: DRPGQGSIIAFLGGDTSVEEPPD*DRPGQG Trigger: GCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTC...GACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCCTGCCCTGGCCTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
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| 3UTR-3UTR TCA 90 bp | AATCCATGGAAGGGCGGCTACCTTCCCCGTCCGTCTGTGCATCCACAGCTTTGTTGTTGGCTCTGGTGGTaGCTGTCCCTCCGCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: NPWKGGYLPRPSVHPQLCCWLWW*LSLRPG Trigger: CCCTGGGCGGAGGGACAGTCACCACCAGAGCCAACA...ACAAAGCTGTGGATGCACAGACGGACGGGGAAGGTAGCCGCCCTTCCATGGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAAAAGGCTTGAAGTTGTTGGCTCTGGTGGTGACTGTCCCTCCGCCCAGGGCACGCCTGCGCTCTGCTaGTTGAAGCACTCTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: GKRLEVVGSGGDCPSAQGTPALC*LKHSGP Trigger: TGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGT...GCCCTGGGCGGAGGGACAGTCACCACCAGAGCCAACAACTTCAAGCCTTTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGGTCTCCCCAGCAGCAGCCTCCTGAGAGCCTTTAAGGCTGGCCTCCTCTGGCATTCCAAACAATaGTTGGTGGGGGTCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: HRGLPSSSLLRAFKAGLLWHSKQ*LVGVQA Trigger: GGCCTGGACCCCCACCAAGCATTGTTTGGAATGCCA...GAGGAGGCCAGCCTTAAAGGCTCTCAGGAGGCTGCTGCTGGGGAGACCTCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGGTCTCCCCAGCAGCAGCCTCCTGAGAGCCTTTAAGGCTGGCCTCCTCAGGACAGGGTGGAGTTaGAGGACACATAGAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: HRGLPSSSLLRAFKAGLLRTGWS*RTHRAG Trigger: CCCAGCTCTATGTGTCCTCCAACTCCACCCTGTCCT...GAGGAGGCCAGCCTTAAAGGCTCTCAGGAGGCTGCTGCTGGGGAGACCTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CAA 90 bp | GCCTGCGCTCTGCTGCTTGAAGCACTCTGGGCCAGACTCCTGGCCTaGGCTTGGGCGGCTTTCAGGTCAGTTGCCTGCTTCACTTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: ACALLLEALWARLLA*AWAAFRSVACFTSL Trigger: TAAAGAAGTGAAGCAGGCAACTGACCTGAAAGCCGCCCAAGCCAAGGCCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR CCA 90 bp | AATCCATGGAAGGGCGGCTACCTTCCCCGTCCGTCTGTGCATCCACAGCTTTGTAGGTGCCATGAGCTGTaGCCCAGGTCTGGTGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: NPWKGGYLPRPSVHPQLCRCHEL*PRSGVD Trigger: GTCCACACCAGACCTGGGCCACAGCTCATGGCACCT...ACAAAGCTGTGGATGCACAGACGGACGGGGAAGGTAGCCGCCCTTCCATGGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCCGAGGCCCGAACTCTTCCCGTTCGTCAATCTGTGCCTTTTGGATGGGGTTGGAGGCATTGAGTTaGTGCCTACTGTGTGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: GSRGPNSSRSSICAFWMGLEALS*CLLCVP Trigger: GGGGACACACAGTAGGCATCAACTCAATGCCTCCAA...CCCCATCCAAAAGGCACAGATTGACGAACGGGAAGAGTTCGGGCCTCGGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCGGGACGTTAAACCTCTTACACAGAAGCTTGTCGGGGTGCCACTCAAACGTCAGCGGCCAGCTGCCTaGCCTTCTCCCGGATTCTGT | + |
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Preference number: 2 (lower is better) Translates to: VRDVKPLTQKLVGVPLKRQRPAA*PSPGFC Trigger: ACAGAATCCGGGAGAAGGCCAGGCAGCTGGCCGCTG...ACGTTTGAGTGGCACCCCGACAAGCTTCTGTGTAAGAGGTTTAACGTCCCGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAAAAGGCTTGAAGTTGTTGGCTCTGGTGGTGACTGTCCCTCCGCCCAGGGCATTCCAAACAATGCTTaGTGGGGGTCCAGGCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: GKRLEVVGSGGDCPSAQGIPNNA*WGSRPL Trigger: CAAGGGCCTGGACCCCCACCAAGCATTGTTTGGAAT...GCCCTGGGCGGAGGGACAGTCACCACCAGAGCCAACAACTTCAAGCCTTTTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR TCA 90 bp | CCACTCGGTCATGCTGGGGTCCAGGCATCGTTCCAGAGCATCTTTCTGACCCTTCCCGCTTGGAGGCATTaGGTTGATGCCTACTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: PLGHAGVQASFQSIFLTLPAWRH*VDAYCV Trigger: CACACAGTAGGCATCAACTCAATGCCTCCAAGCGGG...AAGGGTCAGAAAGATGCTCTGGAACGATGCCTGGACCCCAGCATGACCGAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGGAGGCAGCCGAGGCCCGAACTCTTCCCGTTCGTCAATCTGTGCCTTTTGGCTGGTCCCCTCAGATaGGCCACCAAAAAGATTCAG | + |
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Preference number: 2 (lower is better) Translates to: DRRQPRPELFPFVNLCLLAGPLR*ATKKIQ Trigger: CTGAATCTTTTTGGTGGCGCATCTGAGGGGACCAGC...CAAAAGGCACAGATTGACGAACGGGAAGAGTTCGGGCCTCGGCTGCCTCCTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR CCA 90 bp | ACGTTAAACCTCTTACACAGAAGCTTGTCGGGGTGCCACTCAAACGTGTCTCGGTCTGGGCCAGACTCCTaGCCTTGGCTTGGGCGGCTT | + |
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Preference number: 2 (lower is better) Translates to: TLNLLHRSLSGCHSNVSRSGPDS*PWLGRL Trigger: AAGCCGCCCAAGCCAAGGCCAGGAGTCTGGCCCAGA...CCGAGACACGTTTGAGTGGCACCCCGACAAGCTTCTGTGTAAGAGGTTTAACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CAA 90 bp | TCGTATCGTCTCTGCTTTTCTGGATCTTTGGCAAAAGGCTTGAAGTaGTTGGCTCTGGTGGTGACTGTCCCTCCGCCCAGGGCCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SYRLCFSGSLAKGLK*LALVVTVPPPRARC Trigger: GCACCTGGCCCTGGGCGGAGGGACAGTCACCACCAGAGCCAACAACTTCAAGCCTTTTGCCAAAGATCCAGAAAAGCAGAGACGATACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTCCTCCGAAGATGAGGACTTTTCATCAGAGGAACTGGCGAAGATGGCTTTGGACGCCTGCGCTCTaGTGCTTGAAGCACTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: APPPKMRTFHQRNWRRWLWTPAL*CLKHSG Trigger: CCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCA...AAGCCATCTTCGCCAGTTCCTCTGATGAAAAGTCCTCATCTTCGGAGGAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGTGGACGCCTGCGCTCTGCTGCTTGAAGCACTCTGGGCCAGACTCCTGGATTCAGGTGTTCTCCTaGCATTCCAAACAATGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LVWTPALCCLKHSGPDSWIQVFS*HSKQCL Trigger: CAAGCATTGTTTGGAATGCCAGGAGAACACCTGAAT...CCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTTCTGATTTTTGTATTGTTTGGGAGCTGTCCAGCCATAGAGGCCATCTCCGCCGGGAATAGGGGCTaGAGCAGCGGCCAGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: FFLIFVLFGSCPAIEAISAGNRG*SSGQLP Trigger: AGGCAGCTGGCCGCTGCTGCAGCCCCTATTCCCGGC...GGAGATGGCCTCTATGGCTGGACAGCTCCCAAACAATACAAAAATCAGAAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGAGGCCCGAACTCTTCCCGTTCGTCAATCTGTGCCTTTTGGATGGGGAAGGTCCTCACTATCATCTTaGTCCTCCTCCGAAGATGAG | + |
|
Preference number: 2 (lower is better) Translates to: AEARTLPVRQSVPFGWGRSSLSS*SSSEDE Trigger: CTCATCTTCGGAGGAGGAGCAAGATGATAGTGAGGA...CCTTCCCCATCCAAAAGGCACAGATTGACGAACGGGAAGAGTTCGGGCCTCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTCCTCCTCCGAAGATGAGGACTTTTCATCAGAGGAACTGGCGAAGATGGCTTCTCCAAGAAGATGGCTaGTCCCCTCAGATGCGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: APPPKMRTFHQRNWRRWLLQEDG*SPQMRH Trigger: GTGGCGCATCTGAGGGGACCAGCCATCTTCTTGGAG...AAGCCATCTTCGCCAGTTCCTCTGATGAAAAGTCCTCATCTTCGGAGGAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCGAGGCCCGAACTCTTCCCGTTCGTCAATCTGTGCCTTTTGGATGGGGAAGGCCTACACCAAAAGCCTaGCCAGAAATGCCCAGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: AEARTLPVRQSVPFGWGRPTPKA*PEMPSF Trigger: AAAACTGGGCATTTCTGGCCAGGCTTTTGGTGTAGG...CCTTCCCCATCCAAAAGGCACAGATTGACGAACGGGAAGAGTTCGGGCCTCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGGCCCAGGTCTGGTGTGGACGCCTGCGCTCTGCTGCTTGAAGCACTCTGGTGGATAGAGTTTCTGTaGCGTAGATGTCATCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: LWPRSGVDACALLLEALWWIEFL*RRCHHL Trigger: AAGATGATGACATCTACGCCACAGAAACTCTATCCA...CCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CCA 90 bp | ACGTTAAACCTCTTACACAGAAGCTTGTCGGGGTGCCACTCAAACGTGTCTCGGCTCCTGGCCTTGGCTTaGGCGGCTTTCAGGTCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TLNLLHRSLSGCHSNVSRLLALA*AAFRSV Trigger: AACTGACCTGAAAGCCGCCCAAGCCAAGGCCAGGAG...CCGAGACACGTTTGAGTGGCACCCCGACAAGCTTCTGTGTAAGAGGTTTAACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CAA 90 bp | AACTCTTCGTATCGTCTCTGCTTTTCTGGATCTTTGGCAAAAGGCTaGAAGTTGTTGGCTCTGGTGGTGACTGTCCCTCCGCCCAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: NSSYRLCFSGSLAKG*KLLALVVTVPPPRA Trigger: GGCCCTGGGCGGAGGGACAGTCACCACCAGAGCCAACAACTTCAAGCCTTTTGCCAAAGATCCAGAAAAGCAGAGACGATACGAAGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CAA 90 bp | GCTGCAGCAGCGGCCAGCTGCCTGGCCTTCTCCCGGATTCTGTCTTaGGTTTTGGAAGCAAAATCATCCGTGGTAACAATTGCTTTAGGT | + |
|
Preference number: 2 (lower is better) Translates to: AAAAASCLAFSRILS*VLEAKSSVVTIALG Trigger: ACCTAAAGCAATTGTTACCACGGATGATTTTGCTTCCAAAACCAAAGACAGAATCCGGGAGAAGGCCAGGCAGCTGGCCGCTGCTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CAA 90 bp | GCAGCGGCCAGCTGCCTGGCCTTCTCCCGGATTCTGTCTTTGGTTTaGGAAGCAAAATCATCCGTGGTAACAATTGCTTTAGGTGCTATC | + |
|
Preference number: 2 (lower is better) Translates to: AAASCLAFSRILSLV*EAKSSVVTIALGAI Trigger: GATAGCACCTAAAGCAATTGTTACCACGGATGATTTTGCTTCCAAAACCAAAGACAGAATCCGGGAGAAGGCCAGGCAGCTGGCCGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CAA 90 bp | GCCACCAAAAAGATTCAGGTGTTCTCCTGGCATTCCAAACAATGCTaGGTGGGGGTCCAGGCCCTTGTAGGCCAACCCATGTACATTATC | + |
|
Preference number: 2 (lower is better) Translates to: ATKKIQVFSWHSKQC*VGVQALVGQPMYII Trigger: GATAATGTACATGGGTTGGCCTACAAGGGCCTGGACCCCCACCAAGCATTGTTTGGAATGCCAGGAGAACACCTGAATCTTTTTGGTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CAA 90 bp | TCCGAAGATGAGGACTTTTCATCAGAGGAACTGGCGAAGATGGCTTaGAATAAATCCATGGAAGGGCGGCTACCTTCCCCGTCCGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SEDEDFSSEELAKMA*NKSMEGRLPSPSVC Trigger: ACAGACGGACGGGGAAGGTAGCCGCCCTTCCATGGATTTATTCAAAGCCATCTTCGCCAGTTCCTCTGATGAAAAGTCCTCATCTTCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR TCA 90 bp | GACAGGAGGCAGCCGAGGCCCGAACTCTTCCCGTTCGTCAATCTGTGCCTTTTGCTCTCTTTGTCTTTTTaGGACAGAAACTCCAACACT | + |
|
Preference number: 2 (lower is better) Translates to: DRRQPRPELFPFVNLCLLLSLSF*DRNSNT Trigger: AGTGTTGGAGTTTCTGTCTCAAAAAGACAAAGAGAG...CAAAAGGCACAGATTGACGAACGGGAAGAGTTCGGGCCTCGGCTGCCTCCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CCA 90 bp | GCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTCCATTATTGGAACTGGGAAATCAATaGATGTGCATCATGGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ASWRNLQTETGQGRAPLLELGNQ*MCIMEE Trigger: TTCCTCCATGATGCACATCCATTGATTTCCCAGTTC...CAATAATGGAGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAAATGCCCAGTTTTCTTCCTTTACTCAGTCCAACATCTCCAAGAAGATGGCGAGGGCCGACTCCTTaGCCTTCCTTCCAACCCATT | + |
|
Preference number: 2 (lower is better) Translates to: PEMPSFLPLLSPTSPRRWRGPTP*PSFQPI Trigger: AATGGGTTGGAAGGAAGGGCAAGGAGTCGGCCCTCG...CCATCTTCTTGGAGATGTTGGACTGAGTAAAGGAAGAAAACTGGGCATTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CCA 90 bp | AATAAATCCATGGAAGGGCGGCTACCTTCCCCGTCCGTCTGTGCATCCACAGCTTATCCCTCTTCACTCTaGGTAAGCCAACTAAAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: NKSMEGRLPSPSVCASTAYPSSL*VSQLKL Trigger: CAACTTTAGTTGGCTTACCCAGAGTGAAGAGGGATA...AGCTGTGGATGCACAGACGGACGGGGAAGGTAGCCGCCCTTCCATGGATTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CAA 90 bp | GCCAACATATCGAAGATCTCTCTCGGGTTCTTTCTGATTTTTGTATaGTTTGGGAGCTGTCCAGCCATAGAGGCCATCTCCAGGCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: ANISKISLGFFLIFV*FGSCPAIEAISRLL Trigger: GAGGAGCCTGGAGATGGCCTCTATGGCTGGACAGCTCCCAAACAATACAAAAATCAGAAAGAACCCGAGAGAGATCTTCGATATGTTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCCTCCAGGCGGCAATGCACAGCCATAGATCTTCACACCAGGATCTGGTTTATCCGTGGTAACAATTaGTTTAGGTGCTATCCCGAA | + |
|
Preference number: 2 (lower is better) Translates to: RASRRQCTAIDLHTRIWFIRGNN*FRCYPE Trigger: TTCGGGATAGCACCTAAAGCAATTGTTACCACGGAT...AAACCAGATCCTGGTGTGAAGATCTATGGCTGTGCATTGCCGCCTGGAGGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAAGGGTCCGGGACGTTAAACCTCTTACACAGAAGCTTGTCGGGGTGCCACTCTCGTCTCTGCTTTTCTaGATCTTTGGCAAAAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: IRVRDVKPLTQKLVGVPLSSLLF*IFGKRL Trigger: AAGCCTTTTGCCAAAGATCCAGAAAAGCAGAGACGA...GAGTGGCACCCCGACAAGCTTCTGTGTAAGAGGTTTAACGTCCCGGACCCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTAAAAATAGAAATCAATTTCTGCAACCTTTCAGGGCAGCCTTTGAAATGTCAGAGGAACCTCCAGACTaGGACAGGCCAGGGCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: VKNRNQFLQPFRAAFEMSEEPPD*DRPGQG Trigger: GCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTC...TGACATTTCAAAGGCTGCCCTGAAAGGTTGCAGAAATTGATTTCTATTTTTAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| 3UTR CAA 90 bp | ATGTGTACTAAGAACTCTTCGTATCGTCTCTGCTTTTCTGGATCTTaGGCAAAAGGCTTGAAGTTGTTGGCTCTGGTGGTGACTGTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: MCTKNSSYRLCFSGS*AKGLKLLALVVTVP Trigger: AGGGACAGTCACCACCAGAGCCAACAACTTCAAGCCTTTTGCCAAAGATCCAGAAAAGCAGAGACGATACGAAGAGTTCTTAGTACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCTTTGCTTCCTAAGGCACTGGATTCTTGTTTTGGAGGTCCAACTTTTGATGAAGTAGCTGACCCTTaGATAGGCATCTCTCCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: SSLLPKALDSCFGGPTFDEVADP*IGISPS Trigger: GCTAGGAGAGATGCCTATTCAAGGGTCAGCTACTTC...ATCAAAAGTTGGACCTCCAAAACAAGAATCCAGTGCCTTAGGAAGCAAAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGGAACTGGGAAATCAATaGATGTGCATCATGGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CTMMNWEINGCASWRNLQELGNQ*MCIMEE Trigger: TTCCTCCATGATGCACATCCATTGATTTCCCAGTTC...CTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCTTTGCTTCCTAAGGCACTGGATTCTTGTTTTGGAGGTCCAACTTTTGATGCACAGTGTCATACTTaGATAGAGTTTCTGTGGCGT | + |
|
Preference number: 2 (lower is better) Translates to: SSLLPKALDSCFGGPTFDAQCHT*IEFLWR Trigger: ACGCCACAGAAACTCTATCCAAGTATGACACTGTGC...ATCAAAAGTTGGACCTCCAAAACAAGAATCCAGTGCCTTAGGAAGCAAAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTCATGTGTACTAAGAACTCTTCGTATCGTCTCTGCTTTTCTGGATCTTTGGGCTTTCAGGTCAGTTaGCTGCTTCACTTCTTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: FFMCTKNSSYRLCFSGSLGFQVS*LLHFFN Trigger: ATTAAAGAAGTGAAGCAGGCAACTGACCTGAAAGCC...CAAAGATCCAGAAAAGCAGAGACGATACGAAGAGTTCTTAGTACACATGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTATCTTTAGGTGTAAAATCCACAGGCATGACGTCTTTAGGAGCAAAAGTCACTTCTGTCTTTGGTTTTaGAAGCAAAATCATCCGTGG | + |
|
Preference number: 2 (lower is better) Translates to: IIFRCKIHRHDVFRSKSHFCLWF*KQNHPW Trigger: CCACGGATGATTTTGCTTCCAAAACCAAAGACAGAA...GTGACTTTTGCTCCTAAAGACGTCATGCCTGTGGATTTTACACCTAAAGATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTCATGTGTACTAAGAACTCTTCGTATCGTCTCTGCTTTTCTGGATCTTTGGATTTTTGTATTGTTTaGGAGCTGTCCAGCCATAGA | + |
|
Preference number: 2 (lower is better) Translates to: FFMCTKNSSYRLCFSGSLDFCIV*ELSSHR Trigger: TCTATGGCTGGACAGCTCCCAAACAATACAAAAATC...CAAAGATCCAGAAAAGCAGAGACGATACGAAGAGTTCTTAGTACACATGAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTAAAAATAGAAATCAATTTCTGCAACCTTTCAGGGCAGCCTTTGAAATGTCATGTACAATGATGAACTaGGAAATCAATGGATGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VKNRNQFLQPFRAAFEMSCTMMN*EINGCA Trigger: TGCACATCCATTGATTTCCCAGTTCATCATTGTACA...TGACATTTCAAAGGCTGCCCTGAAAGGTTGCAGAAATTGATTTCTATTTTTAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| 3UTR CCA 72 bp | ACTGTCCCTCCGCCCAGGGCCAGGTGCCATGAGCTGTaGCCCAGGTCTGGTGTGGACGCCTGCGCTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TVPPPRARCHEL*PRSGVDACALL Trigger: CAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCCACAGCTCATGGCACCTGGCCCTGGGCGGAGGGACAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR GCA 72 bp | GAGGTCATCAAGCAGCGTGGCGCCGGGAATAGGGGCTaGAGCAGCGGCCAGCTGCCTGGCCTTCTCCCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: EVIKQRGAGNRG*SSGQLPGLLPD Trigger: ATCCGGGAGAAGGCCAGGCAGCTGGCCGCTGCTGCAGCCCCTATTCCCGGCGCCACGCTGCTTGATGACCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CCA 72 bp | GGGCCAGGTGCCATGAGCTGTGGCCCAGGTCTGGTGTaGACGCCTGCGCTCTGCTGCTTGAAGCACTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GPGAMSCGPGLV*TPALCCLKHSG Trigger: CCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCCACAGCTCATGGCACCTGGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR GCA 72 bp | TGTGGCCCAGGTCTGGTGTGGACGCCTGCGCTCTGCTaGTTGAAGCACTCTGGGCCAGACTCCTGGCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: CGPGLVWTPALC*LKHSGPDSWPW Trigger: CCAAGGCCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCCACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR GCA 72 bp | GGACAGGGTGGAGTTGGAGGACACATAGAGCTGGGCTaGCCGGGCAAACTCTTCCCGCTCTCGGCTTCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GQGGVGGHIELG*PGKLFPLSASL Trigger: GAGCGAAGCCGAGAGCGGGAAGAGTTTGCCCGGGCAGCCCAGCTCTATGTGTCCTCCAACTCCACCCTGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CCA 72 bp | GCGCTCTGCTGCTTGAAGCACTCTGGGCCAGACTCCTaGCCTTGGCTTGGGCGGCTTTCAGGTCAGTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ALCCLKHSGPDS*PWLGRLSGQLP Trigger: AGGCAACTGACCTGAAAGCCGCCCAAGCCAAGGCCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCAGAGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CCA 72 bp | CTTCCCGCTCTCGGCTTCGCTCCCACTCGGTCATGCTaGGGTCCAGGCATCGTTCCAGAGCATCTTTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LPALGFAPTRSC*GPGIVPEHLSD Trigger: GTCAGAAAGATGCTCTGGAACGATGCCTGGACCCCAGCATGACCGAGTGGGAGCGAAGCCGAGAGCGGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR GCA 72 bp | ACTCTTCCCGCTCTCGGCTTCGCTCCCACTCGGTCATaGTGGGGTCCAGGCATCGTTCCAGAGCATCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TLPALGFAPTRS*WGPGIVPEHLS Trigger: AGAAAGATGCTCTGGAACGATGCCTGGACCCCAGCATGACCGAGTGGGAGCGAAGCCGAGAGCGGGAAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CCA 72 bp | TGCTGCTTGAAGCACTCTGGGCCAGACTCCTGGCCTTaGCTTGGGCGGCTTTCAGGTCAGTTGCCTGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CCLKHSGPDSWP*LGRLSGQLPAS Trigger: TGAAGCAGGCAACTGACCTGAAAGCCGCCCAAGCCAAGGCCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CCA 72 bp | CGAACTCTTCCCGTTCGTCAATCTGTGCCTTTTGGATaGGGAAGGGGGTTGCAGGCTCACAAGGCTCCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RTLPVRQSVPFG*GRGLQAHKAPA Trigger: AGCCGGAGCCTTGTGAGCCTGCAACCCCCTTCCCCATCCAAAAGGCACAGATTGACGAACGGGAAGAGTTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGACCACAGAGGTCTCCCCAGCAGCAGCCTCCTGAGAGCCTTTAAGGCTGGCAAAGGCTTGAAGTTGTaGGCTCTGGTGGTGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KDHRGLPSSSLLRAFKAGKGLKL*ALVVTV Trigger: GACAGTCACCACCAGAGCCAACAACTTCAAGCCTTT...GCCAGCCTTAAAGGCTCTCAGGAGGCTGCTGCTGGGGAGACCTCTGTGGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CCA 72 bp | CGGCAATGCACAGCCATAGATCTTCACACCAGGATCTaGTTTCTGTCGGCGCGCCTTTCTCTTCACCCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RQCTAIDLHTRI*FLSARLSLHPR Trigger: CCTCGGGTGAAGAGAAAGGCGCGCCGACAGAAACCAGATCCTGGTGTGAAGATCTATGGCTGTGCATTGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR TCA 72 bp | GAAGCTTGTCGGGGTGCCACTCAAACGTGTCTCGGGTaGGCTTCCCGAACATCTTCATCTTCACAGCCGACT | + |
|
Preference number: 3 (lower is better) Translates to: EACRGATQTCLG*ASRTSSSSQPT Trigger: AGTCGGCTGTGAAGATGAAGATGTTCGGGAAGCTCACCCGAGACACGTTTGAGTGGCACCCCGACAAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR GCA 72 bp | TCCAGACTGAGACAGGCCAGGGCAGGGCTCCATTATTaGCTTCTTAGGGGGAGACACTTCAGTCTTGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: SRLRQARAGLHY*LLRGRHFSLAP Trigger: TGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCCTGCCCTGGCCTGTCTCAGTCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| 3UTR GCA 72 bp | GGGACGTTAAACCTCTTACACAGAAGCTTGTCGGGGTaGCACTCAAACGTGTCTCGGGTGAGCTTCCCGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GTLNLLHRSLSG*HSNVSRVSFPN Trigger: GTTCGGGAAGCTCACCCGAGACACGTTTGAGTGGCACCCCGACAAGCTTCTGTGTAAGAGGTTTAACGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR GCA 72 bp | TCGTGTCTGGGCGTGGCTCTGGGGCCTGTTCCTCTTTaGTTCCTAAGGCACTGGATTCTTGTTTTGGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SCLGVALGPVPL*FLRHWILVLEV Trigger: GACCTCCAAAACAAGAATCCAGTGCCTTAGGAAGCAAAGAGGAACAGGCCCCAGAGCCACGCCCAGACACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR GCA 72 bp | GTGAGCTTCCCGAACATCTTCATCTTCACAGCCGACTaGTTGTCACTGACATCGTTCTCTTGGTCCCGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VSFPNIFIFTAD*LSLTSFSWSRG Trigger: CCCTCGGGACCAAGAGAACGATGTCAGTGACAAGCAGTCGGCTGTGAAGATGAAGATGTTCGGGAAGCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CCA 72 bp | CTCAGATGCGCCACCAAAAAGATTCAGGTGTTCTCCTaGCATTCCAAACAATGCTTGGTGGGGGTCCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LRCATKKIQVFS*HSKQCLVGVQA Trigger: GGCCTGGACCCCCACCAAGCATTGTTTGGAATGCCAGGAGAACACCTGAATCTTTTTGGTGGCGCATCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGACCACAGAGGTCTCCCCAGCAGCAGCCTCCTGAGAGCCTTTAAGGCTGGCCACTGGATTCTTGTTTaGGAGGTCCAACTTTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: KDHRGLPSSSLLRAFKAGHWILV*EVQLLI Trigger: GATCAAAAGTTGGACCTCCAAAACAAGAATCCAGTG...GCCAGCCTTAAAGGCTCTCAGGAGGCTGCTGCTGGGGAGACCTCTGTGGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR TCA 72 bp | CGAACATCTTCATCTTCACAGCCGACTGCTTGTCACTaGCATCGTTCTCTTGGTCCCGAGGGACTTCGACCT | + |
|
Preference number: 3 (lower is better) Translates to: RTSSSSQPTACH*HRSLGPEGLRP Trigger: AGGTCGAAGTCCCTCGGGACCAAGAGAACGATGTCAGTGACAAGCAGTCGGCTGTGAAGATGAAGATGTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR GCA 72 bp | AAAAAGATTCAGGTGTTCTCCTGGCATTCCAAACAATaGTTGGTGGGGGTCCAGGCCCTTGTAGGCCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: KKIQVFSWHSKQ*LVGVQALVGQP Trigger: GGGTTGGCCTACAAGGGCCTGGACCCCCACCAAGCATTGTTTGGAATGCCAGGAGAACACCTGAATCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCTCCTCCGAAGATGAGGACTTTTCATCAGAGGAACTGGCGAAGATGGCTTCTCTTACACAGAAGCTaGTCGGGGTGCCACTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: APPPKMRTFHQRNWRRWLLLHRS*SGCHSN Trigger: GTTTGAGTGGCACCCCGACAAGCTTCTGTGTAAGAG...AAGCCATCTTCGCCAGTTCCTCTGATGAAAAGTCCTCATCTTCGGAGGAGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCTCCTCCGAAGATGAGGACTTTTCATCAGAGGAACTGGCGAAGATGGCTTGATGGTTTCCTGGATTaGTCTGAACCCCGTTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: APPPKMRTFHQRNWRRWLDGFLD*SEPRCC Trigger: GCAGCAACGGGGTTCAGACAAATCCAGGAAACCATC...AAGCCATCTTCGCCAGTTCCTCTGATGAAAAGTCCTCATCTTCGGAGGAGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTTTTCTGGATCTTTGGCAAAAGGCTTGAAGTTGTTGGCTCTGGTGGTGACCATTCCAAACAATGCTaGGTGGGGGTCCAGGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLFWIFGKRLEVVGSGGDHSKQC*VGVQAL Trigger: AAGGGCCTGGACCCCCACCAAGCATTGTTTGGAATG...GTCACCACCAGAGCCAACAACTTCAAGCCTTTTGCCAAAGATCCAGAAAAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR GCA 72 bp | TTCATCCTCAGACTCTTCAGAGCCTCCAGGCGGCAATaGACAGCCATAGATCTTCACACCAGGATCTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FILRLFRASRRQ*TAIDLHTRIWF Trigger: AAACCAGATCCTGGTGTGAAGATCTATGGCTGTGCATTGCCGCCTGGAGGCTCTGAAGAGTCTGAGGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR GCA 72 bp | TCCAACATCTCCAAGAAGATGGCTGGTCCCCTCAGATaGGCCACCAAAAAGATTCAGGTGTTCTCCTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SNISKKMAGPLR*ATKKIQVFSWH Trigger: ATGCCAGGAGAACACCTGAATCTTTTTGGTGGCGCATCTGAGGGGACCAGCCATCTTCTTGGAGATGTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CCA 72 bp | ACAATGATGAACTGGGAAATCAATGGATGTGCATCATaGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TMMNWEINGCAS*RNLQTETGQGR Trigger: CCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACTCGGTCATGCTGGGGTCCAGGCATCGTTCCAGAGCATCTTTCTGACCCTTATTCTGTCTTTGGTTTaGGAAGCAAAATCATCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: PLGHAGVQASFQSIFLTLILSLV*EAKSSV Trigger: CACGGATGATTTTGCTTCCAAAACCAAAGACAGAAT...AAGGGTCAGAAAGATGCTCTGGAACGATGCCTGGACCCCAGCATGACCGAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR TCA 72 bp | AGGACTTTTCATCAGAGGAACTGGCGAAGATGGCTTTaGATAAATCCATGGAAGGGCGGCTACCTTCCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: RTFHQRNWRRWL*INPWKGGYLPR Trigger: ACGGGGAAGGTAGCCGCCCTTCCATGGATTTATTCAAAGCCATCTTCGCCAGTTCCTCTGATGAAAAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR TCA 72 bp | ACTGTCCTCACTATCATCTTGCTCCTCCTCCGAAGATaGGGACTTTTCATCAGAGGAACTGGCGAAGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: TVLTIILLLLRR*GLFIRGTGEDG Trigger: GCCATCTTCGCCAGTTCCTCTGATGAAAAGTCCTCATCTTCGGAGGAGGAGCAAGATGATAGTGAGGACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CCA 72 bp | TTTCTTCCTTTACTCAGTCCAACATCTCCAAGAAGATaGCTGGTCCCCTCAGATGCGCCACCAAAAAGATTC | + |
|
Preference number: 3 (lower is better) Translates to: FLPLLSPTSPRR*LVPSDAPPKRF Trigger: GAATCTTTTTGGTGGCGCATCTGAGGGGACCAGCCATCTTCTTGGAGATGTTGGACTGAGTAAAGGAAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTCTGATTTTTGTATTGTTTGGGAGCTGTCCAGCCATAGAGGCCATCTCCAGCACAGTGTCATACTaGGATAGAGTTTCTGTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: FFLIFVLFGSCPAIEAISSTVSY*DRVSVA Trigger: CGCCACAGAAACTCTATCCAAGTATGACACTGTGCT...GGAGATGGCCTCTATGGCTGGACAGCTCCCAAACAATACAAAAATCAGAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCTTTGCTTCCTAAGGCACTGGATTCTTGTTTTGGAGGTCCAACTTTTGATGGGAGCGTCAGGAAGTaGAAGACTGAGTATTTATCC | + |
|
Preference number: 3 (lower is better) Translates to: SSLLPKALDSCFGGPTFDGSVRK*KTEYLS Trigger: GGATAAATACTCAGTCTTCAACTTCCTGACGCTCCC...ATCAAAAGTTGGACCTCCAAAACAAGAATCCAGTGCCTTAGGAAGCAAAGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR GCA 72 bp | TTCTTCATGTGTACTAAGAACTCTTCGTATCGTCTCTaGTTTTCTGGATCTTTGGCAAAAGGCTTGAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FFMCTKNSSYRL*FSGSLAKGLKL Trigger: CAACTTCAAGCCTTTTGCCAAAGATCCAGAAAAGCAGAGACGATACGAAGAGTTCTTAGTACACATGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CAA 72 bp | GGCCCAGGTCTGGTGTGGACGCCTGCGCTCTGCTGCTaGAAGCACTCTGGGCCAGACTCCTGGCCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPGLVWTPALCC*KHSGPDSWPWL Trigger: AAGCCAAGGCCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CAA 72 bp | CGGCTACCTTCCCCGTCCGTCTGTGCATCCACAGCTTaGTCTACAGTCGTGTCTGGGCGTGGCTCTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLPSPSVCASTA*STVVSGRGSGA Trigger: GGCCCCAGAGCCACGCCCAGACACGACTGTAGACAAAGCTGTGGATGCACAGACGGACGGGGAAGGTAGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| CDS-3UTR CCA 90 bp | AATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTGGCCCAGGTCTGGTGTaGACGCCTGCGCTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NGCASWRNLQTETGQGRAGPGLV*TPALCC Trigger: GCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCC...AGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| 3UTR CAA 72 bp | CTGCTGCTTGAAGCACTCTGGGCCAGACTCCTGGCCTaGGCTTGGGCGGCTTTCAGGTCAGTTGCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLEALWARLLA*AWAAFRSVACF Trigger: GAAGCAGGCAACTGACCTGAAAGCCGCCCAAGCCAAGGCCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| CDS-3UTR TCA 90 bp | TCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCCTCCTTGGCGTGAGTaGACCTGGAGGACAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SMDVHHGGTSRLRQARAGPPWRE*TWRTGW Trigger: CCACCCTGTCCTCCAGGTTCACTCACGCCAAGGAGG...CCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | TCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCCAGCAGCAGCCTCCTaGGAGCCTTTAAGGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SMDVHHGGTSRLRQARAGPAAAS*EPLRLA Trigger: GGCCAGCCTTAAAGGCTCTCAGGAGGCTGCTGCTGG...CCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | AATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTCAGCGGCCAGCTGCCTaGCCTTCTCCCGGATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NGCASWRNLQTETGQGRAQRPAA*PSPGFC Trigger: ACAGAATCCGGGAGAAGGCCAGGCAGCTGGCCGCTG...AGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTACGCCTGCGCTCTGCTaGTTGAAGCACTCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NGCASWRNLQTETGQGRATPALC*LKHSGP Trigger: TGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGT...AGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | GCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTCCATTATTGACGCCTGCGCTCTGCTaGTTGAAGCACTCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASWRNLQTETGQGRAPLLTPALC*LKHSGP Trigger: TGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGT...CAATAATGGAGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCCCAGGTCTGGTGTaGACGCCTGCGCTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WEINGCASWRNLQTETGQGPGLV*TPALCC Trigger: GCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCC...CTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | CATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTCCATTATTGCAGGTGCCATGAGCTGTaGCCCAGGTCTGGTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HHGGTSRLRQARAGLHYCRCHEL*PRSGVD Trigger: GTCCACACCAGACCTGGGCCACAGCTCATGGCACCT...GCAATAATGGAGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | AATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTGTCTGGGCGTGGCTCTaGGGCCTGTTCCTCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NGCASWRNLQTETGQGRAVWAWL*GLFLFA Trigger: AGCAAAGAGGAACAGGCCCCAGAGCCACGCCCAGAC...AGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCATGTTGGCTCTGGTGGTaGCTGTCCCTCCGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSMDVHHGGTSRLRQARACWLWW*LSLRPG Trigger: CCCTGGGCGGAGGGACAGTCACCACCAGAGCCAACA...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | CATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTCCATTATTGCCGAGGGACTTCGACCTaGTCTGAATCCTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HHGGTSRLRQARAGLHYCRGTST*SESSSS Trigger: GGAGGAGGAGGATTCAGATCAGGTCGAAGTCCCTCG...GCAATAATGGAGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTCCATTACTCCTGGCCTTGGCTTaGGCGGCTTTCAGGTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CASWRNLQTETGQGRAPLLLALA*AAFRSV Trigger: AACTGACCTGAAAGCCGCCCAAGCCAAGGCCAGGAG...TAATGGAGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| 3UTR CAA 72 bp | AGGCCCGAACTCTTCCCGTTCGTCAATCTGTGCCTTTaGGATGGGGAAGGGGGTTGCAGGCTCACAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPELFPFVNLCL*DGEGGCRLTRL Trigger: GAGCCTTGTGAGCCTGCAACCCCCTTCCCCATCCAAAAGGCACAGATTGACGAACGGGAAGAGTTCGGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGTGGACGCCTGCGCTCTGCTGCTTGAAGCACTCTGGGCCAGACTCCTGGTTCCTTTCTCATCTCTaGCAGTCTGGTCTTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVWTPALCCLKHSGPDSWFLSHL*QSGLVE Trigger: CTCTACAAGACCAGACTGTCAGAGATGAGAAAGGAA...CCAGGAGTCTGGCCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| CDS-3UTR TCA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCACCTCCTTGGCGTGAGTaGACCTGGAGGACAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSMDVHHGGTSRLRQARAPPWRE*TWRTGW Trigger: CCACCCTGTCCTCCAGGTTCACTCACGCCAAGGAGG...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | CATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTCCATTATTGCCCGACTGCTTGTCACTaGCATCGTTCTCTTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HHGGTSRLRQARAGLHYCPTACH*HRSLGP Trigger: GGGACCAAGAGAACGATGTCAGTGACAAGCAGTCGG...GCAATAATGGAGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCACCAGCAGCAGCCTCCTaGGAGCCTTTAAGGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSMDVHHGGTSRLRQARAPAAAS*EPLRLA Trigger: GGCCAGCCTTAAAGGCTCTCAGGAGGCTGCTGCTGG...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTTGGCATTCCAAACAATaGTTGGTGGGGGTCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NGCASWRNLQTETGQGRAWHSKQ*LVGVQA Trigger: GGCCTGGACCCCCACCAAGCATTGTTTGGAATGCCA...AGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTAGAAGCTTGTCGGGGTaGCACTCAAACGTGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NGCASWRNLQTETGQGRARSLSG*HSNVSR Trigger: CCGAGACACGTTTGAGTGGCACCCCGACAAGCTTCT...AGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | GACAGGCCAGGGCAGGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCAGAAGCTTGTCGGGGTaGCACTCAAACGTGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DRPGQGSIIAFLGGDTSVRSLSG*HSNVSR Trigger: CCGAGACACGTTTGAGTGGCACCCCGACAAGCTTCT...GACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCCTGCCCTGGCCTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGATGGGGAAGGGGGTTaGAGGCTCACAAGGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSMDVHHGGTSRLRQARADGEGG*RLTRLR Trigger: CCGGAGCCTTGTGAGCCTGCAACCCCCTTCCCCATC...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCTTGCACCAGGTTCAGCGGCCAGCTGCCTaGCCTTCTCCCGGATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGSIIAFLGGDTSVLHQVQRPAA*PSPGFC Trigger: ACAGAATCCGGGAGAAGGCCAGGCAGCTGGCCGCTG...AACCTGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGTCTGGGCCAGACTCCTaGCCTTGGCTTGGGCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WEINGCASWRNLQTETGQSGPDS*PWLGRL Trigger: AAGCCGCCCAAGCCAAGGCCAGGAGTCTGGCCCAGA...CTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | TCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGAGGACAGGGTGGAGTTaGAGGACACATAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SMDVHHGGTSRLRQARAGRTGWS*RTHRAG Trigger: CCCAGCTCTATGTGTCCTCCAACTCCACCCTGTCCT...CCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | GCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTCCATTATTGCGCCCTGTTCTGTCTTaGAGACACAAAGGTAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASWRNLQTETGQGRAPLLRPVLS*RHKGRG Trigger: CCCTCTACCTTTGTGTCTTCAAGACAGAACAGGGCG...CAATAATGGAGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGTCCTCCTCCTTGGCGTaGGTGAACCTGGAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: WEINGCASWRNLQTETGQSSSLA*VNLEDR Trigger: CCTGTCCTCCAGGTTCACTCACGCCAAGGAGGAGGA...CTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGCGAGGGCCGACTCCTTaGCCTTCCTTCCAACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: GKSMDVHHGGTSRLRQARRGPTP*PSFQPI Trigger: AATGGGTTGGAAGGAAGGGCAAGGAGTCGGCCCTCG...CCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGTGGACGCCTGCGCTCTaGTGCTTGAAGCACTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WEINGCASWRNLQTETGQWTPAL*CLKHSG Trigger: CCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCA...CTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCATGGACGCCTGCGCTCTaGTGCTTGAAGCACTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSMDVHHGGTSRLRQARAWTPAL*CLKHSG Trigger: CCCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCA...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGGAGACACTTCAGTCTTGCACCAGGTTCCACTTCTAACAGCAACTCCAACCACATAGAGCTGGGCTaGCCGGGCAAACTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGRHFSLAPGSTSNSNSNHIELG*PGKLFP Trigger: CGGGAAGAGTTTGCCCGGGCAGCCCAGCTCTATGTG...GTTGGAGTTGCTGTTAGAAGTGGAACCTGGTGCAAGACTGAAGTGTCTCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | TCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCGCTCCCACTGTCACTaGTGTCTGTACTCTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SMDVHHGGTSRLRQARAGRSHCH*CLYSQN Trigger: GTTCTGAGAGTACAGACAGCAGTGACAGTGGGAGCG...CCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079693.12 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCCCAGGTCTGGTGTGGACGCCTGCGCTCTGCTGCTTGAAGCACTCTGGGGTCTTGTAGAGGAATaGGTTTCTTTGGTCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LWPRSGVDACALLLEALWGLVEE*VSLVFH Trigger: GTGAAAGACCAAAGAAACCCATTCCTCTACAAGACC...CCAGAGTGCTTCAAGCAGCAGAGCGCAGGCGTCCACACCAGACCTGGGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| CDS-3UTR CCA 90 bp | GACAGGCCAGGGCAGGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCCCACTAAAGGCTCCGTaGAAGCGCTTGTACCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRPGQGSIIAFLGGDTSVPLKAP*KRLYLP Trigger: AGGAAGGTACAAGCGCTTCCACGGAGCCTTTAGTGG...GACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCCTGCCCTGGCCTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | GGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCTTGCACCAGGTTCCCTCCAAGAAGATGGCTaGTCCCCTCAGATGCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLHYCLLRGRHFSLAPGSLQEDG*SPQMRH Trigger: GTGGCGCATCTGAGGGGACCAGCCATCTTCTTGGAG...GGAACCTGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCACCAGACTCCTGGCCTTaGCTTGGGCGGCTTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSMDVHHGGTSRLRQARAPDSWP*LGRLSG Trigger: ACCTGAAAGCCGCCCAAGCCAAGGCCAGGAGTCTGG...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | CAGGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCTTGCACCAGGTTCCAGACTCCTGGCCTTaGCTTGGGCGGCTTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGSIIAFLGGDTSVLHQVPDSWP*LGRLSG Trigger: ACCTGAAAGCCGCCCAAGCCAAGGCCAGGAGTCTGG...AACCTGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | GCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTCCATTATTGTTTTTCACTTGGTACTaGAGCTGTGGGCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASWRNLQTETGQGRAPLLFFTWY*SCGQRG Trigger: GCCCCTCTGCCCACAGCTCCAGTACCAAGTGAAAAA...CAATAATGGAGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGTCTGGGCGTGGCTCTaGGGCCTGTTCCTCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WEINGCASWRNLQTETGQVWAWL*GLFLFA Trigger: AGCAAAGAGGAACAGGCCCCAGAGCCACGCCCAGAC...CTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| 3UTR CAA 72 bp | TGCTTTTCTGGATCTTTGGCAAAAGGCTTGAAGTTGTaGGCTCTGGTGGTGACTGTCCCTCCGCCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CFSGSLAKGLKL*ALVVTVPPPRA Trigger: GGCCCTGGGCGGAGGGACAGTCACCACCAGAGCCAACAACTTCAAGCCTTTTGCCAAAGATCCAGAAAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CAA 72 bp | GTCGTGTCTGGGCGTGGCTCTGGGGCCTGTTCCTCTTaGCTTCCTAAGGCACTGGATTCTTGTTTTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VVSGRGSGACSS*LPKALDSCFGG Trigger: ACCTCCAAAACAAGAATCCAGTGCCTTAGGAAGCAAAGAGGAACAGGCCCCAGAGCCACGCCCAGACACGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| CDS-3UTR CCA 90 bp | GGCAAAAGGCTTGAAGTTGTTGGCTCTGGTGGTGACTGTCCCTCCGCCCAGGGCAGGAATGGGTTTCTTTaGTCTTTCACCTTCGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKRLEVVGSGGDCPSAQGRNGFL*SFTFVQ Trigger: CTGGACGAAGGTGAAAGACCAAAGAAACCCATTCCT...GCCCTGGGCGGAGGGACAGTCACCACCAGAGCCAACAACTTCAAGCCTTTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCCTCCTGGCCTTGGCTTaGGCGGCTTTCAGGTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGKSMDVHHGGTSRLRQALLALA*AAFRSV Trigger: AACTGACCTGAAAGCCGCCCAAGCCAAGGCCAGGAG...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| 3UTR CAA 72 bp | AAGATTCAGGTGTTCTCCTGGCATTCCAAACAATGCTaGGTGGGGGTCCAGGCCCTTGTAGGCCAACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KIQVFSWHSKQC*VGVQALVGQPM Trigger: CATGGGTTGGCCTACAAGGGCCTGGACCCCCACCAAGCATTGTTTGGAATGCCAGGAGAACACCTGAATCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| 3UTR CAA 72 bp | CTCTGCTTTTCTGGATCTTTGGCAAAAGGCTTGAAGTaGTTGGCTCTGGTGGTGACTGTCCCTCCGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCFSGSLAKGLK*LALVVTVPPPR Trigger: CCTGGGCGGAGGGACAGTCACCACCAGAGCCAACAACTTCAAGCCTTTTGCCAAAGATCCAGAAAAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| 3UTR CAA 72 bp | CTGAGAGCCTTTAAGGCTGGCCTCCTCAGTGTGCTCTaGACTGTCCTCACTATCATCTTGCTCCTCCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LRAFKAGLLSVL*TVLTIILLLLR Trigger: TCGGAGGAGGAGCAAGATGATAGTGAGGACAGTCAAGAGCACACTGAGGAGGCCAGCCTTAAAGGCTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| CDS-3UTR TCA 90 bp | TGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGCCGACTGCTTGTCACTaGCATCGTTCTCTTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WEINGCASWRNLQTETGQPTACH*HRSLGP Trigger: GGGACCAAGAGAACGATGTCAGTGACAAGCAGTCGG...CTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCTTGCACCAGGTTCCCAAACGTGTCTCGGGTaGGCTTCCCGAACATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLHYCLLRGRHFSLAPGSQTCLG*ASRTSS Trigger: TGAAGATGTTCGGGAAGCTCACCCGAGACACGTTTG...GGAACCTGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
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| CDS-3UTR GCA 90 bp | GGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCTGGTCCCCTCAGATaGGCCACCAAAAAGATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKSMDVHHGGTSRLRQARAGPLR*ATKKIQ Trigger: CTGAATCTTTTTGGTGGCGCATCTGAGGGGACCAGC...CCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTTCCTCACTATCATCTTaGTCCTCCTCCGAAGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: NGCASWRNLQTETGQGRASSLSS*SSSEDE Trigger: CTCATCTTCGGAGGAGGAGCAAGATGATAGTGAGGA...AGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | TGCCACTCAAACGTGTCTCGGGTGAGCTTCCCGAACATCTTCATCTTCACAGCCCCACTAAAGGCTCCGTaGAAGCGCTTGTACCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CHSNVSRVSFPNIFIFTAPLKAP*KRLYLP Trigger: AGGAAGGTACAAGCGCTTCCACGGAGCCTTTAGTGG...GGCTGTGAAGATGAAGATGTTCGGGAAGCTCACCCGAGACACGTTTGAGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| CDS-3UTR CCA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCATCTGTGCCTTTTGGATaGGGAAGGGGGTTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSMDVHHGGTSRLRQARASVPFG*GRGLQA Trigger: AGCCTGCAACCCCCTTCCCCATCCAAAAGGCACAGA...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCGTTTCTGGCGAGAGTTaGGGCAGAAGACAGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGKSMDVHHGGTSRLRQAVSGES*GRRQEA Trigger: TGCCTCCTGTCTTCTGCCCCAACTCTCGCCAGAAAC...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | TCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGTTCCTTTCTCATCTCTaGCAGTCTGGTCTTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SMDVHHGGTSRLRQARAGFLSHL*QSGLVE Trigger: CTCTACAAGACCAGACTGTCAGAGATGAGAAAGGAA...CCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR TCA 90 bp | AATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTTTCCTTTCTCATCTCTaGCAGTCTGGTCTTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NGCASWRNLQTETGQGRAFLSHL*QSGLVE Trigger: CTCTACAAGACCAGACTGTCAGAGATGAGAAAGGAA...AGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR TCA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCCGCCCTGTTCTGTCTTaGAGACACAAAGGTAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGKSMDVHHGGTSRLRQARPVLS*RHKGRG Trigger: CCCTCTACCTTTGTGTCTTCAAGACAGAACAGGGCG...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR TCA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCTTGGAGGCATTGAGTTaGTGCCTACTGTGTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGKSMDVHHGGTSRLRQALEALS*CLLCVP Trigger: GGGGACACACAGTAGGCATCAACTCAATGCCTCCAA...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR TCA 90 bp | CAGGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCTTGCACCAGGTTTTGGAGGCATTGAGTTaGTGCCTACTGTGTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGSIIAFLGGDTSVLHQVLEALS*CLLCVP Trigger: GGGGACACACAGTAGGCATCAACTCAATGCCTCCAA...AACCTGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
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| CDS-3UTR GCA 90 bp | TGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGTTCCCCGTCCGTCTGTaGATCCACAGCTTTGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: WEINGCASWRNLQTETGQFPVRL*IHSFVY Trigger: GTAGACAAAGCTGTGGATGCACAGACGGACGGGGAA...CTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | TCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGTCATCTCTGACAGTCTaGTCTTGTAGAGGAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SMDVHHGGTSRLRQARAGSSLTV*SCRGMG Trigger: ACCCATTCCTCTACAAGACCAGACTGTCAGAGATGA...CCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCCCACTAAAGGCTCCGTaGAAGCGCTTGTACCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGKSMDVHHGGTSRLRQAPLKAP*KRLYLP Trigger: AGGAAGGTACAAGCGCTTCCACGGAGCCTTTAGTGG...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGATTCCAAACAATGCTTaGTGGGGGTCCAGGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WEINGCASWRNLQTETGQIPNNA*WGSRPL Trigger: CAAGGGCCTGGACCCCCACCAAGCATTGTTTGGAAT...CTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR TCA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCGAAGTAGCTGACCCTTaGATAGGCATCTCTCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGKSMDVHHGGTSRLRQAEVADP*IGISPS Trigger: GCTAGGAGAGATGCCTATTCAAGGGTCAGCTACTTC...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR TCA 90 bp | GGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCTTGCACCAGGTTCCTGGCGAAGATGGCTTTaGATAAATCCATGGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLHYCLLRGRHFSLAPGSWRRWL*INPWKG Trigger: GCCCTTCCATGGATTTATTCAAAGCCATCTTCGCCA...GGAACCTGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
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| CDS-3UTR GCA 90 bp | AATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTGGCTTTCAGGTCAGTTaGCTGCTTCACTTCTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: NGCASWRNLQTETGQGRAGFQVS*LLHFFN Trigger: ATTAAAGAAGTGAAGCAGGCAACTGACCTGAAAGCC...AGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | AATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTTATCCCTCTTCACTCTaGGTAAGCCAACTAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NGCASWRNLQTETGQGRAYPSSL*VSQLKL Trigger: CAACTTTAGTTGGCTTACCCAGAGTGAAGAGGGATA...AGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| 3UTR CAA 72 bp | GAGGACTTTTCATCAGAGGAACTGGCGAAGATGGCTTaGAATAAATCCATGGAAGGGCGGCTACCTTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: EDFSSEELAKMA*NKSMEGRLPSP Trigger: CGGGGAAGGTAGCCGCCCTTCCATGGATTTATTCAAAGCCATCTTCGCCAGTTCCTCTGATGAAAAGTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| CDS-3UTR TCA 90 bp | CATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTCCATTATTGCCTCTCGGGTTCTTTCTaGTTTTTGTATTGTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HHGGTSRLRQARAGLHYCLSGSF*FLYCLG Trigger: TCCCAAACAATACAAAAATCAGAAAGAACCCGAGAG...GCAATAATGGAGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | TACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAATGTTGGCTCTGGTGGTaGCTGTCCCTCCGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YNLYNDELGNQWMCIMEECWLWW*LSLRPG Trigger: CCCTGGGCGGAGGGACAGTCACCACCAGAGCCAACA...TTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | ATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGGACTTCGACCTGATCTaGATCCTCCTCCTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MMNWEINGCASWRNLQTEDFDLI*ILLLLG Trigger: GCCAAGGAGGAGGAGGATTCAGATCAGGTCGAAGTC...CTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGAGCGTCAGGAAGTTaGAGACTGAGTATTTATCCC | + |
|
Preference number: 4 (lower is better) Translates to: WEINGCASWRNLQTETGQGASGS*RLSIYP Trigger: GGGATAAATACTCAGTCTTCAACTTCCTGACGCTCC...CTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | TGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGTTTCCTGGATTTGTCTaGACCCCGTTGCTGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CTMMNWEINGCASWRNLQFPGFV*TPLLRG Trigger: GCCCCGCAGCAACGGGGTTCAGACAAATCCAGGAAA...CTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGCCGGGAATAGGGGCTaGAGCAGCGGCCAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KYNLYNDELGNQWMCIMEAGNRG*SSGQLP Trigger: AGGCAGCTGGCCGCTGCTGCAGCCCCTATTCCCGGC...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAATCTTCACAGCCGACTaGTTGTCACTGACATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSMDVHHGGTSRLRQARAIFTAD*LSLTSF Trigger: GAACGATGTCAGTGACAAGCAGTCGGCTGTGAAGAT...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCTTGCACCAGGTTCCAGGAATGGGTTTCTTTaGTCTTTCACCTTCGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLHYCLLRGRHFSLAPGSRNGFL*SFTFVQ Trigger: CTGGACGAAGGTGAAAGACCAAAGAAACCCATTCCT...GGAACCTGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | GTCCGGGACGTTAAACCTCTTACACAGAAGCTTGTCGGGGTGCCACTCAAACGTTCATCTCTGACAGTCTaGTCTTGTAGAGGAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRDVKPLTQKLVGVPLKRSSLTV*SCRGMG Trigger: ACCCATTCCTCTACAAGACCAGACTGTCAGAGATGA...ACGTTTGAGTGGCACCCCGACAAGCTTCTGTGTAAGAGGTTTAACGTCCCGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCCCTACACCAAAAGCCTaGCCAGAAATGCCCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TGKSMDVHHGGTSRLRQAPTPKA*PEMPSF Trigger: AAAACTGGGCATTTCTGGCCAGGCTTTTGGTGTAGG...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | GCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTCCATTATTGTGGATAGAGTTTCTGTaGCGTAGATGTCATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASWRNLQTETGQGRAPLLWIEFL*RRCHHL Trigger: AAGATGATGACATCTACGCCACAGAAACTCTATCCA...CAATAATGGAGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | ATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGGTTTCTGGCGAGAGTTaGGGCAGAAGACAGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MMNWEINGCASWRNLQTEVSGES*GRRQEA Trigger: TGCCTCCTGTCTTCTGCCCCAACTCTCGCCAGAAAC...CTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR TCA 90 bp | CCATCTCCAGGCTCCTCGTCCTTCAGCACAGTGTCATACTTGGATAGAGTTTCTTTGAGCCGACGGTATTaGAGTAACCAGCAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PSPGSSSFSTVSYLDRVSLSRRY*SNQQRN Trigger: GTTTCTCTGCTGGTTACTTCAATACCGTCGGCTCAA...AGAAACTCTATCCAAGTATGACACTGTGCTGAAGGACGAGGAGCCTGGAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGCGGCTTTCAGGTCAGTTGCCTGCTTCACTTCTTTAATTCTCTCTTTGTCCGCCCTGTTCTGTCTTaGAGACACAAAGGTAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGGFQVSCLLHFFNSLFVRPVLS*RHKGRG Trigger: CCCTCTACCTTTGTGTCTTCAAGACAGAACAGGGCG...GACAAAGAGAGAATTAAAGAAGTGAAGCAGGCAACTGACCTGAAAGCCGCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| CDS-3UTR TCA 90 bp | TACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACTTCTCAGCAGCTCCTaGGGGGACAGCTCTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YNLYNDELGNQWMCIMEELLSSS*GDSSAG Trigger: GCCAGCAGAGCTGTCCCCTCAGGAGCTGCTGAGAAG...TTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079693.12 |
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| CDS-3UTR GCA 90 bp | TCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGAACAATTGCTTTAGGTaGTATCCCGAATTCACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SMDVHHGGTSRLRQARAGNNCFR*YPEFTK Trigger: CTTAGTGAATTCGGGATAGCACCTAAAGCAATTGTT...CCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | TGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGTGGCATTCCAAACAATaGTTGGTGGGGGTCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CTMMNWEINGCASWRNLQWHSKQ*LVGVQA Trigger: GGCCTGGACCCCCACCAAGCATTGTTTGGAATGCCA...CTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | AGGGGGAGACACTTCAGTCTTGCACCAGGTTCCACTTCTAACAGCAACTCCAACGCACAGTGTCATACTTaGATAGAGTTTCTGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RGRHFSLAPGSTSNSNSNAQCHT*IEFLWR Trigger: ACGCCACAGAAACTCTATCCAAGTATGACACTGTGC...GTTGGAGTTGCTGTTAGAAGTGGAACCTGGTGCAAGACTGAAGTGTCTCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | AATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGTCTGGGCCAGACTCCTaGCCTTGGCTTGGGCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTICTMMNWEINGCASWRSGPDS*PWLGRL Trigger: AAGCCGCCCAAGCCAAGGCCAGGAGTCTGGCCCAGA...CCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| 3UTR CAA 72 bp | TCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCTaGCACCAGGTTCCACTTCTAACAGCAACTCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: SIIAFLGGDTSV*HQVPLLTATPT Trigger: CGTTGGAGTTGCTGTTAGAAGTGGAACCTGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | ATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGGAAGTAGCTGACCCTTaGATAGGCATCTCTCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: MMNWEINGCASWRNLQTEEVADP*IGISPS Trigger: GCTAGGAGAGATGCCTATTCAAGGGTCAGCTACTTC...CTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR TCA 90 bp | TACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAATCCTCCTCCTTGGCGTaGGTGAACCTGGAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNLYNDELGNQWMCIMEESSSLA*VNLEDR Trigger: CCTGTCCTCCAGGTTCACTCACGCCAAGGAGGAGGA...TTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | ATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGCTCCTCCTCCGAAGATaGGGACTTTTCATCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MMNWEINGCASWRNLQTELLLRR*GLFIRG Trigger: TCCTCTGATGAAAAGTCCTCATCTTCGGAGGAGGAG...CTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCATCCGTGGTAACAATTaGTTTAGGTGCTATCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGKSMDVHHGGTSRLRQAIRGNN*FRCYPE Trigger: TTCGGGATAGCACCTAAAGCAATTGTTACCACGGAT...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGTCTTCGTATCGTCTCTaGTTTTCTGGATCTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WEINGCASWRNLQTETGQSSYRL*FSGSLA Trigger: TGCCAAAGATCCAGAAAAGCAGAGACGATACGAAGA...CTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR GCA 90 bp | AATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGCACATAGAGCTGGGCTaGCCGGGCAAACTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NTICTMMNWEINGCASWRHIELG*PGKLFP Trigger: CGGGAAGAGTTTGCCCGGGCAGCCCAGCTCTATGTG...CCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCGGTCTTGTAGAGGAATaGGTTTCTTTGGTCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGKSMDVHHGGTSRLRQAGLVEE*VSLVFH Trigger: GTGAAAGACCAAAGAAACCCATTCCTCTACAAGACC...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | TGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGATTCCAAACAATGCTTaGTGGGGGTCCAGGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CTMMNWEINGCASWRNLQIPNNA*WGSRPL Trigger: CAAGGGCCTGGACCCCCACCAAGCATTGTTTGGAAT...CTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGATTCAGGTGTTCTCCTaGCATTCCAAACAATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WEINGCASWRNLQTETGQIQVFS*HSKQCL Trigger: CAAGCATTGTTTGGAATGCCAGGAGAACACCTGAAT...CTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCATCGTCTCTGCTTTTCTaGATCTTTGGCAAAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSMDVHHGGTSRLRQARASSLLF*IFGKRL Trigger: AAGCCTTTTGCCAAAGATCCAGAAAAGCAGAGACGA...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | TGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACCTGGAGGACAGGGTaGAGTTGGAGGACACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTMMNWEINGCASWRNLQTWRTG*SWRTHR Trigger: TCTATGTGTCCTCCAACTCCACCCTGTCCTCCAGGT...CTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR TCA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCCTCTCTTTGTCTTTTTaGGACAGAAACTCCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: TGKSMDVHHGGTSRLRQALSLSF*DRNSNT Trigger: AGTGTTGGAGTTTCTGTCTCAAAAAGACAAAGAGAG...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR TCA 90 bp | AATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGTTTCCTGGATTTGTCTaGACCCCGTTGCTGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTICTMMNWEINGCASWRFPGFV*TPLLRG Trigger: GCCCCGCAGCAACGGGGTTCAGACAAATCCAGGAAA...CCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR GCA 90 bp | GGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCTTGCACCAGGTTCCAACAATTGCTTTAGGTaGTATCCCGAATTCACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLHYCLLRGRHFSLAPGSNNCFR*YPEFTK Trigger: CTTAGTGAATTCGGGATAGCACCTAAAGCAATTGTT...GGAACCTGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
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| CDS-3UTR GCA 90 bp | TACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACGAGGGCCGACTCCTTaGCCTTCCTTCCAACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: YNLYNDELGNQWMCIMEERGPTP*PSFQPI Trigger: AATGGGTTGGAAGGAAGGGCAAGGAGTCGGCCCTCG...TTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR GCA 90 bp | GTTAAAAATAGAAATCAATTTCTGCAACCTTTCAGGGCAGCCTTTGAAATGTCAGATGGGGAAGGGGGTTaGAGGCTCACAAGGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VKNRNQFLQPFRAAFEMSDGEGG*RLTRLR Trigger: CCGGAGCCTTGTGAGCCTGCAACCCCCTTCCCCATC...TGACATTTCAAAGGCTGCCCTGAAAGGTTGCAGAAATTGATTTCTATTTTTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR GCA 90 bp | GGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGTTCTGTGTTCCTTTTTaGTCTTGTGTCTTTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKSMDVHHGGTSRLRQARFCVPF*SCVFLC Trigger: GCAAAGAAAGACACAAGAGCAAAAAGGAACACAGAA...CCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCATTCTGTCTTTGGTTTTaGAAGCAAAATCATCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSMDVHHGGTSRLRQARAFCLWF*KQNHPW Trigger: CCACGGATGATTTTGCTTCCAAAACCAAAGACAGAA...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR TCA 90 bp | AATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGCCCGCTTGGAGGCATTaGGTTGATGCCTACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTICTMMNWEINGCASWRPAWRH*VDAYCV Trigger: CACACAGTAGGCATCAACTCAATGCCTCCAAGCGGG...CCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR TCA 90 bp | TACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCCGCTTGGAGGCATTaGGTTGATGCCTACTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YNLYNDELGNQWMCIMEEPAWRH*VDAYCV Trigger: CACACAGTAGGCATCAACTCAATGCCTCCAAGCGGG...TTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | AATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGGACTTCGACCTGATCTaGATCCTCCTCCTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTICTMMNWEINGCASWRDFDLI*ILLLLG Trigger: GCCAAGGAGGAGGAGGATTCAGATCAGGTCGAAGTC...CCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | TGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGGGAGCGTCAGGAAGTTaGAGACTGAGTATTTATCCC | + |
|
Preference number: 4 (lower is better) Translates to: CTMMNWEINGCASWRNLQGASGS*RLSIYP Trigger: GGGATAAATACTCAGTCTTCAACTTCCTGACGCTCC...CTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR GCA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGTGTGTCCCCACGTCCTaGCCTGCTTTCCCAGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KYNLYNDELGNQWMCIMECVPTS*PAFPDD Trigger: GTCATCTGGGAAAGCAGGGCAGGACGTGGGGACACA...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | GTTAAAAATAGAAATCAATTTCTGCAACCTTTCAGGGCAGCCTTTGAAATGTCAAGGTGCCATGAGCTGTaGCCCAGGTCTGGTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VKNRNQFLQPFRAAFEMSRCHEL*PRSGVD Trigger: GTCCACACCAGACCTGGGCCACAGCTCATGGCACCT...TGACATTTCAAAGGCTGCCCTGAAAGGTTGCAGAAATTGATTTCTATTTTTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | AATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGTCTGTGCCTTTTGGATaGGGAAGGGGGTTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTICTMMNWEINGCASWRSVPFG*GRGLQA Trigger: AGCCTGCAACCCCCTTCCCCATCCAAAAGGCACAGA...CCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| 3UTR CAA 72 bp | AAGAACTCTTCGTATCGTCTCTGCTTTTCTGGATCTTaGGCAAAAGGCTTGAAGTTGTTGGCTCTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KNSSYRLCFSGS*AKGLKLLALVV Trigger: CACCACCAGAGCCAACAACTTCAAGCCTTTTGCCAAAGATCCAGAAAAGCAGAGACGATACGAAGAGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| CDS-3UTR TCA 90 bp | GTTAAAAATAGAAATCAATTTCTGCAACCTTTCAGGGCAGCCTTTGAAATGTCACGAGGGACTTCGACCTaGTCTGAATCCTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKNRNQFLQPFRAAFEMSRGTST*SESSSS Trigger: GGAGGAGGAGGATTCAGATCAGGTCGAAGTCCCTCG...TGACATTTCAAAGGCTGCCCTGAAAGGTTGCAGAAATTGATTTCTATTTTTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | TACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACAAACGTGTCTCGGGTaGGCTTCCCGAACATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YNLYNDELGNQWMCIMEEQTCLG*ASRTSS Trigger: TGAAGATGTTCGGGAAGCTCACCCGAGACACGTTTG...TTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGGAGACACTTCAGTCTTGCACCAGGTTCCACTTCTAACAGCAACTCCAACATCCTTCCAAAATTTTaGCAACATATCGAAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGRHFSLAPGSTSNSNSNILPKF*QHIEDL Trigger: GAGATCTTCGATATGTTGGCAAAATTTTGGAAGGAT...GTTGGAGTTGCTGTTAGAAGTGGAACCTGGTGCAAGACTGAAGTGTCTCCCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | GTTAAAAATAGAAATCAATTTCTGCAACCTTTCAGGGCAGCCTTTGAAATGTCATGTGTCCCCACGTCCTaGCCTGCTTTCCCAGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VKNRNQFLQPFRAAFEMSCVPTS*PAFPDD Trigger: GTCATCTGGGAAAGCAGGGCAGGACGTGGGGACACA...TGACATTTCAAAGGCTGCCCTGAAAGGTTGCAGAAATTGATTTCTATTTTTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | TACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAATTCCCCGTCCGTCTGTaGATCCACAGCTTTGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: YNLYNDELGNQWMCIMEEFPVRL*IHSFVY Trigger: GTAGACAAAGCTGTGGATGCACAGACGGACGGGGAA...TTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | GTTAAAAATAGAAATCAATTTCTGCAACCTTTCAGGGCAGCCTTTGAAATGTCACTCCAAGAAGATGGCTaGTCCCCTCAGATGCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKNRNQFLQPFRAAFEMSLQEDG*SPQMRH Trigger: GTGGCGCATCTGAGGGGACCAGCCATCTTCTTGGAG...TGACATTTCAAAGGCTGCCCTGAAAGGTTGCAGAAATTGATTTCTATTTTTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | TGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGGCACAGTGTCATACTTaGATAGAGTTTCTGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: CTMMNWEINGCASWRNLQAQCHT*IEFLWR Trigger: ACGCCACAGAAACTCTATCCAAGTATGACACTGTGC...CTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGAGGACAGGGTGGAGTTaGAGGACACATAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KYNLYNDELGNQWMCIMERTGWS*RTHRAG Trigger: CCCAGCTCTATGTGTCCTCCAACTCCACCCTGTCCT...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | ATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGTATCCCTCTTCACTCTaGGTAAGCCAACTAAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MMNWEINGCASWRNLQTEYPSSL*VSQLKL Trigger: CAACTTTAGTTGGCTTACCCAGAGTGAAGAGGGATA...CTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | TACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAATTTTTCACTTGGTACTaGAGCTGTGGGCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YNLYNDELGNQWMCIMEEFFTWY*SCGQRG Trigger: GCCCCTCTGCCCACAGCTCCAGTACCAAGTGAAAAA...TTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR GCA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGCTGGTCCCCTCAGATaGGCCACCAAAAAGATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KYNLYNDELGNQWMCIMEAGPLR*ATKKIQ Trigger: CTGAATCTTTTTGGTGGCGCATCTGAGGGGACCAGC...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | TGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGTCTTCGTATCGTCTCTaGTTTTCTGGATCTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CTMMNWEINGCASWRNLQSSYRL*FSGSLA Trigger: TGCCAAAGATCCAGAAAAGCAGAGACGATACGAAGA...CTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | TGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGTCGTCTCTGCTTTTCTaGATCTTTGGCAAAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTMMNWEINGCASWRNLQSSLLF*IFGKRL Trigger: AAGCCTTTTGCCAAAGATCCAGAAAAGCAGAGACGA...CTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| 3UTR CAA 72 bp | AAAAACTCGCTAATGGAATCCTCTTTCTTCTCCTGTTaGGATGTGTCCCATCGTGATGGTTTCCTGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: KNSLMESSFFSC*DVSHRDGFLDL Trigger: CAAATCCAGGAAACCATCACGATGGGACACATCCAAACAGGAGAAGAAAGAGGATTCCATTAGCGAGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
||
| CDS-3UTR TCA 90 bp | TACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAATTGAGCCGACGGTATTaGAGTAACCAGCAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YNLYNDELGNQWMCIMEELSRRY*SNQQRN Trigger: GTTTCTCTGCTGGTTACTTCAATACCGTCGGCTCAA...TTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | TGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGCTCTCGGGTTCTTTCTaGTTTTTGTATTGTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CTMMNWEINGCASWRNLQLSGSF*FLYCLG Trigger: TCCCAAACAATACAAAAATCAGAAAGAACCCGAGAG...CTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGCTCCTCCTCCGAAGATaGGGACTTTTCATCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KYNLYNDELGNQWMCIMELLLRR*GLFIRG Trigger: TCCTCTGATGAAAAGTCCTCATCTTCGGAGGAGGAG...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | TGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGTGGATAGAGTTTCTGTaGCGTAGATGTCATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTMMNWEINGCASWRNLQWIEFL*RRCHHL Trigger: AAGATGATGACATCTACGCCACAGAAACTCTATCCA...CTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | TGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGGATTTTTGTATTGTTTaGGAGCTGTCCAGCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTMMNWEINGCASWRNLQDFCIV*ELSSHR Trigger: TCTATGGCTGGACAGCTCCCAAACAATACAAAAATC...CTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGTGGCGAAGATGGCTTTaGATAAATCCATGGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KYNLYNDELGNQWMCIMEWRRWL*INPWKG Trigger: GCCCTTCCATGGATTTATTCAAAGCCATCTTCGCCA...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGTCCTCACTATCATCTTaGTCCTCCTCCGAAGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: KYNLYNDELGNQWMCIMESSLSS*SSSEDE Trigger: CTCATCTTCGGAGGAGGAGCAAGATGATAGTGAGGA...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | TACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAAAGGAATGGGTTTCTTTaGTCTTTCACCTTCGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YNLYNDELGNQWMCIMEERNGFL*SFTFVQ Trigger: CTGGACGAAGGTGAAAGACCAAAGAAACCCATTCCT...TTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CCA 90 bp | AATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGTCATCTCTGACAGTCTaGTCTTGTAGAGGAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTICTMMNWEINGCASWRSSLTV*SCRGMG Trigger: ACCCATTCCTCTACAAGACCAGACTGTCAGAGATGA...CCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR GCA 90 bp | TACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAAGGCTTTCAGGTCAGTTaGCTGCTTCACTTCTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YNLYNDELGNQWMCIMEEGFQVS*LLHFFN Trigger: ATTAAAGAAGTGAAGCAGGCAACTGACCTGAAAGCC...TTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGATCCGTGGTAACAATTaGTTTAGGTGCTATCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KYNLYNDELGNQWMCIMEIRGNN*FRCYPE Trigger: TTCGGGATAGCACCTAAAGCAATTGTTACCACGGAT...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | TACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAATTCTGTCTTTGGTTTTaGAAGCAAAATCATCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YNLYNDELGNQWMCIMEEFCLWF*KQNHPW Trigger: CCACGGATGATTTTGCTTCCAAAACCAAAGACAGAA...TTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGTTCTGTGTTCCTTTTTaGTCTTGTGTCTTTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTICTMMNWEINGCASWRFCVPF*SCVFLC Trigger: GCAAAGAAAGACACAAGAGCAAAAAGGAACACAGAA...CCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | GTTAAAAATAGAAATCAATTTCTGCAACCTTTCAGGGCAGCCTTTGAAATGTCAATTCAGGTGTTCTCCTaGCATTCCAAACAATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKNRNQFLQPFRAAFEMSIQVFS*HSKQCL Trigger: CAAGCATTGTTTGGAATGCCAGGAGAACACCTGAAT...TGACATTTCAAAGGCTGCCCTGAAAGGTTGCAGAAATTGATTTCTATTTTTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR TCA 90 bp | GTTAAAAATAGAAATCAATTTCTGCAACCTTTCAGGGCAGCCTTTGAAATGTCACTCTCTTTGTCTTTTTaGGACAGAAACTCCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: VKNRNQFLQPFRAAFEMSLSLSF*DRNSNT Trigger: AGTGTTGGAGTTTCTGTCTCAAAAAGACAAAGAGAG...TGACATTTCAAAGGCTGCCCTGAAAGGTTGCAGAAATTGATTTCTATTTTTAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CCA 90 bp | GTTAAAAATAGAAATCAATTTCTGCAACCTTTCAGGGCAGCCTTTGAAATGTCAGATTTTTGTATTGTTTaGGAGCTGTCCAGCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKNRNQFLQPFRAAFEMSDFCIV*ELSSHR Trigger: TCTATGGCTGGACAGCTCCCAAACAATACAAAAATC...TGACATTTCAAAGGCTGCCCTGAAAGGTTGCAGAAATTGATTTCTATTTTTAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR GCA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGATCCTTCCAAAATTTTaGCAACATATCGAAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KYNLYNDELGNQWMCIMEILPKF*QHIEDL Trigger: GAGATCTTCGATATGTTGGCAAAATTTTGGAAGGAT...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | AATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTGCCAGACTCCTGGCCTaGGCTTGGGCGGCTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NGCASWRNLQTETGQGRAARLLA*AWAAFR Trigger: CCTGAAAGCCGCCCAAGCCAAGGCCAGGAGTCTGGC...AGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS GCA 90 bp | GGGGAGACACTTCAGTCTTCTCAGCAGCTCCTGAGGGGACAGCTCTaGTGGCCCTCCGTCATCGCTCCCACTGTCACTGCTGTCTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: GETLQSSQQLLRGQL*WPSVIAPTVTAVCT Trigger: AGTACAGACAGCAGTGACAGTGGGAGCGATGACGGAGGGCCAGCAGAGCTGTCCCCTCAGGAGCTGCTGAGAAGACTGAAGTGTCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079693.12 |
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| CDS CCA 90 bp | GAGACACTTCAGTCTTCTCAGCAGCTCCTGAGGGGACAGCTCTGCTaGCCCTCCGTCATCGCTCCCACTGTCACTGCTGTCTGTACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ETLQSSQQLLRGQLC*PSVIAPTVTAVCTL Trigger: GAGAGTACAGACAGCAGTGACAGTGGGAGCGATGACGGAGGGCCAGCAGAGCTGTCCCCTCAGGAGCTGCTGAGAAGACTGAAGTGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079693.12 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCGAGGCCCGAACTCTTCCCGTTCGTCAATCTGTGCCTTTTGGATGGGGGCTCCGTGGAAGCGCTaGTACCTTCCTTTCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GSRGPNSSRSSICAFWMGAPWKR*YLPFSS Trigger: AGATGAGAAAGGAAGGTACAAGCGCTTCCACGGAGC...CCCCATCCAAAAGGCACAGATTGACGAACGGGAAGAGTTCGGGCCTCGGCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131143.2 |
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| CDS-3UTR CAA 90 bp | TGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGCCAGACTCCTGGCCTaGGCTTGGGCGGCTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WEINGCASWRNLQTETGQARLLA*AWAAFR Trigger: CCTGAAAGCCGCCCAAGCCAAGGCCAGGAGTCTGGC...CTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCGGATGGGGAAGGGGGTaGCAGGCTCACAAGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TGKSMDVHHGGTSRLRQAGWGRG*QAHKAP Trigger: CGGAGCCTTGTGAGCCTGCAACCCCCTTCCCCATCC...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGATGGGGAAGGGGGTaGCAGGCTCACAAGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: KSMDVHHGGTSRLRQARAGWGRG*QAHKAP Trigger: CGGAGCCTTGTGAGCCTGCAACCCCCTTCCCCATCC...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | AATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTAGTTTCTGGCGAGAGTaGGGGCAGAAGACAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NGCASWRNLQTETGQGRASFWRE*GQKTGG Trigger: GCCTCCTGTCTTCTGCCCCAACTCTCGCCAGAAACT...AGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | GACAGGCCAGGGCAGGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCGTCAATCTGTGCCTTTaGGATGGGGAAGGGGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DRPGQGSIIAFLGGDTSVVNLCL*DGEGGC Trigger: GCAACCCCCTTCCCCATCCAAAAGGCACAGATTGAC...GACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCCTGCCCTGGCCTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCTTGCACCAGGTTACTCCTGGCCTTGGCTaGGGCGGCTTTCAGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QGSIIAFLGGDTSVLHQVTPGLG*GGFQVS Trigger: ACTGACCTGAAAGCCGCCCAAGCCAAGGCCAGGAGT...AACCTGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | AATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGCTCTCTTACACAGAAGCTaGTCGGGGTGCCACTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NGCASWRNLQTETGQGRALLHRS*SGCHSN Trigger: GTTTGAGTGGCACCCCGACAAGCTTCTGTGTAAGAG...AGCCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGCATTCCAAACAATGCTaGGTGGGGGTCCAGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GKSMDVHHGGTSRLRQARHSKQC*VGVQAL Trigger: AAGGGCCTGGACCCCCACCAAGCATTGTTTGGAATG...CCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCTTGCACCAGGTTAGTTTCTGGCGAGAGTaGGGGCAGAAGACAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QGSIIAFLGGDTSVLHQVSFWRE*GQKTGG Trigger: GCCTCCTGTCTTCTGCCCCAACTCTCGCCAGAAACT...AACCTGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGCTTGGAGGCATTGAGTaGATGCCTACTGTGTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GKSMDVHHGGTSRLRQARLGGIE*MPTVCP Trigger: GGGACACACAGTAGGCATCAACTCAATGCCTCCAAG...CCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCCTCTTACACAGAAGCTaGTCGGGGTGCCACTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TGKSMDVHHGGTSRLRQALLHRS*SGCHSN Trigger: GTTTGAGTGGCACCCCGACAAGCTTCTGTGTAAGAG...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAAAGGCTTGAAGTTGTaGGCTCTGGTGGTGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TGKSMDVHHGGTSRLRQAKGLKL*ALVVTV Trigger: GACAGTCACCACCAGAGCCAACAACTTCAAGCCTTT...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | GACAGGCCAGGGCAGGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCTGCTTTTCTGGATCTTaGGCAAAAGGCTTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DRPGQGSIIAFLGGDTSVCFSGS*AKGLKL Trigger: CAACTTCAAGCCTTTTGCCAAAGATCCAGAAAAGCA...GACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCCTGCCCTGGCCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGTAAGCCAACTAAAGTaGAGCCTGGATAAGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: KSMDVHHGGTSRLRQARAVSQLK*SLDKGP Trigger: CGGACCCTTATCCAGGCTCAACTTTAGTTGGCTTAC...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGGAGACACTTCAGTCTTGCACCAGGTTCCACTTCTAACAGCAACTCCAACGTAAGCCAACTAAAGTaGAGCCTGGATAAGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RGRHFSLAPGSTSNSNSNVSQLK*SLDKGP Trigger: CGGACCCTTATCCAGGCTCAACTTTAGTTGGCTTAC...GTTGGAGTTGCTGTTAGAAGTGGAACCTGGTGCAAGACTGAAGTGTCTCCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCACTCCTCAGTGTGCTCTaGACTGTCCTCACTATCATC | + |
|
Preference number: 5 (lower is better) Translates to: KSMDVHHGGTSRLRQARALLSVL*TVLTII Trigger: GATGATAGTGAGGACAGTCAAGAGCACACTGAGGAG...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
||
| CDS CCA 90 bp | GCTCCGTGGAAGCGCTTGTACCTTCCTTTCTCATCTCTGACAGTCTaGTCTTGTAGAGGAATGGGTTTCTTTGGTCTTTCACCTTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: APWKRLYLPFSSLTV*SCRGMGFFGLSPSS Trigger: GGACGAAGGTGAAAGACCAAAGAAACCCATTCCTCTACAAGACCAGACTGTCAGAGATGAGAAAGGAAGGTACAAGCGCTTCCACGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079693.12 ENSMUST00000131143.2 ENSMUST00000131213.8 |
||
| CDS-3UTR CAA 90 bp | TCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAGGGATTCTGTCTTTGGTTTaGGAAGCAAAATCATCCGTG | + |
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Preference number: 5 (lower is better) Translates to: SMDVHHGGTSRLRQARAGILSLV*EAKSSV Trigger: CACGGATGATTTTGCTTCCAAAACCAAAGACAGAAT...CCCTGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | GACAGGCCAGGGCAGGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCATTCTGTCTTTGGTTTaGGAAGCAAAATCATCCGTG | + |
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Preference number: 5 (lower is better) Translates to: DRPGQGSIIAFLGGDTSVILSLV*EAKSSV Trigger: CACGGATGATTTTGCTTCCAAAACCAAAGACAGAAT...GACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCCTGCCCTGGCCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCAAGCACAGTGTCATACTaGGATAGAGTTTCTGTGGCG | + |
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Preference number: 5 (lower is better) Translates to: KSMDVHHGGTSRLRQARASTVSY*DRVSVA Trigger: CGCCACAGAAACTCTATCCAAGTATGACACTGTGCT...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | AGGGGGAGACACTTCAGTCTTGCACCAGGTTCCACTTCTAACAGCAACTCCAACGGGAGCGTCAGGAAGTaGAAGACTGAGTATTTATCC | + |
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Preference number: 5 (lower is better) Translates to: RGRHFSLAPGSTSNSNSNGSVRK*KTEYLS Trigger: GGATAAATACTCAGTCTTCAACTTCCTGACGCTCCC...GTTGGAGTTGCTGTTAGAAGTGGAACCTGGTGCAAGACTGAAGTGTCTCCCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | TGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGGTCAATCTGTGCCTTTaGGATGGGGAAGGGGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: CTMMNWEINGCASWRNLQVNLCL*DGEGGC Trigger: GCAACCCCCTTCCCCATCCAAAAGGCACAGATTGAC...CTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | GGGCTCCATTATTGCCTTCTTAGGGGGAGACACTTCAGTCTTGCACCAGGTTCCCTTGGGTTTCTCTTTTaGAGGTATCTCGAGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: GLHYCLLRGRHFSLAPGSLGFLF*RYLEFL Trigger: CAGAAACTCGAGATACCTCAAAAAGAGAAACCCAAG...GGAACCTGGTGCAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | AAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCAGGGCATGCTTTTCTGGATCTTaGGCAAAAGGCTTGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: KSMDVHHGGTSRLRQARACFSGS*AKGLKL Trigger: CAACTTCAAGCCTTTTGCCAAAGATCCAGAAAAGCA...TGCCCTGGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | ATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGTTCACAGCCGACTGCTaGTCACTGACATCGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: MMNWEINGCASWRNLQTEFTADC*SLTSFS Trigger: AGAGAACGATGTCAGTGACAAGCAGTCGGCTGTGAA...CTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | ACTGGGAAATCAATGGATGTGCATCATGGAGGAACCTCCAGACTGAGACAGGCCCACTGGATTCTTGTTTaGGAGGTCCAACTTTTGATC | + |
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Preference number: 5 (lower is better) Translates to: TGKSMDVHHGGTSRLRQAHWILV*EVQLLI Trigger: GATCAAAAGTTGGACCTCCAAAACAAGAATCCAGTG...GGCCTGTCTCAGTCTGGAGGTTCCTCCATGATGCACATCCATTGATTTCCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGACTCCTGGCCTTGGCTaGGGCGGCTTTCAGGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: KYNLYNDELGNQWMCIMETPGLG*GGFQVS Trigger: ACTGACCTGAAAGCCGCCCAAGCCAAGGCCAGGAGT...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | AATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGGATGGTTTCCTGGATTaGTCTGAACCCCGTTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: NTICTMMNWEINGCASWRDGFLD*SEPRCC Trigger: GCAGCAACGGGGTTCAGACAAATCCAGGAAACCATC...CCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGCTCCGTGGAAGCGCTaGTACCTTCCTTTCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: KYNLYNDELGNQWMCIMEAPWKR*YLPFSS Trigger: AGATGAGAAAGGAAGGTACAAGCGCTTCCACGGAGC...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGCTTGGAGGCATTGAGTaGATGCCTACTGTGTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: KYNLYNDELGNQWMCIMELGGIE*MPTVCP Trigger: GGGACACACAGTAGGCATCAACTCAATGCCTCCAAG...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | TACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGAACTCCTCAGTGTGCTCTaGACTGTCCTCACTATCATC | + |
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Preference number: 5 (lower is better) Translates to: YNLYNDELGNQWMCIMEELLSVL*TVLTII Trigger: GATGATAGTGAGGACAGTCAAGAGCACACTGAGGAG...TTCCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGTTCACAGCCGACTGCTaGTCACTGACATCGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: KYNLYNDELGNQWMCIMEFTADC*SLTSFS Trigger: AGAGAACGATGTCAGTGACAAGCAGTCGGCTGTGAA...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | AATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGGGGGAGCGTCAGGAAGTaGAAGACTGAGTATTTATCC | + |
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Preference number: 5 (lower is better) Translates to: NTICTMMNWEINGCASWRGSVRK*KTEYLS Trigger: GGATAAATACTCAGTCTTCAACTTCCTGACGCTCCC...CCTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | GTTAAAAATAGAAATCAATTTCTGCAACCTTTCAGGGCAGCCTTTGAAATGTCAGATGGTTTCCTGGATTaGTCTGAACCCCGTTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: VKNRNQFLQPFRAAFEMSDGFLD*SEPRCC Trigger: GCAGCAACGGGGTTCAGACAAATCCAGGAAACCATC...TGACATTTCAAAGGCTGCCCTGAAAGGTTGCAGAAATTGATTTCTATTTTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS GCA 90 bp | GATTCTGTCTTTGGTTTTGGAAGCAAAATCATCCGTGGTAACAATTaGTTTAGGTGCTATCCCGAATTCACTAAGATCCTCTTCGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: DSVFGFGSKIIRGNN*FRCYPEFTKILFVH Trigger: ATGGACGAAGAGGATCTTAGTGAATTCGGGATAGCACCTAAAGCAATTGTTACCACGGATGATTTTGCTTCCAAAACCAAAGACAGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | GTTAAAAATAGAAATCAATTTCTGCAACCTTTCAGGGCAGCCTTTGAAATGTCAAAAGGCTTGAAGTTGTaGGCTCTGGTGGTGACTGTC | + |
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Preference number: 5 (lower is better) Translates to: VKNRNQFLQPFRAAFEMSKGLKL*ALVVTV Trigger: GACAGTCACCACCAGAGCCAACAACTTCAAGCCTTT...TGACATTTCAAAGGCTGCCCTGAAAGGTTGCAGAAATTGATTTCTATTTTTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | GTTAAAAATAGAAATCAATTTCTGCAACCTTTCAGGGCAGCCTTTGAAATGTCAAGCACAGTGTCATACTaGGATAGAGTTTCTGTGGCG | + |
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Preference number: 5 (lower is better) Translates to: VKNRNQFLQPFRAAFEMSSTVSY*DRVSVA Trigger: CGCCACAGAAACTCTATCCAAGTATGACACTGTGCT...TGACATTTCAAAGGCTGCCCTGAAAGGTTGCAGAAATTGATTTCTATTTTTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGCACTGGATTCTTGTTTaGGAGGTCCAACTTTTGATC | + |
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Preference number: 5 (lower is better) Translates to: KYNLYNDELGNQWMCIMEHWILV*EVQLLI Trigger: GATCAAAAGTTGGACCTCCAAAACAAGAATCCAGTG...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS-3UTR CAA 90 bp | AAATACAATCTGTACAATGATGAACTGGGAAATCAATGGATGTGCATCATGGAGCTTGGGTTTCTCTTTTaGAGGTATCTCGAGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: KYNLYNDELGNQWMCIMELGFLF*RYLEFL Trigger: CAGAAACTCGAGATACCTCAAAAAGAGAAACCCAAG...CTCCATGATGCACATCCATTGATTTCCCAGTTCATCATTGTACAGATTGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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| CDS CCA 72 bp | CAGTCTTCTCAGCAGCTCCTGAGGGGACAGCTCTGCTaGCCCTCCGTCATCGCTCCCACTGTCACTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: QSSQQLLRGQLC*PSVIAPTVTAV Trigger: GACAGCAGTGACAGTGGGAGCGATGACGGAGGGCCAGCAGAGCTGTCCCCTCAGGAGCTGCTGAGAAGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079693.12 |
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| CDS TCA 72 bp | CTTAGGGGGAGACACTTCAGTCTTCTCAGCAGCTCCTaGGGGGACAGCTCTGCTGGCCCTCCGTCATCGCTC | + |
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Preference number: 6 (lower is better) Translates to: LRGRHFSLLSSS*GDSSAGPPSSL Trigger: GAGCGATGACGGAGGGCCAGCAGAGCTGTCCCCTCAGGAGCTGCTGAGAAGACTGAAGTGTCTCCCCCTAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079693.12 |
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| CDS GCA 72 bp | CTTCAGTCTTCTCAGCAGCTCCTGAGGGGACAGCTCTaGTGGCCCTCCGTCATCGCTCCCACTGTCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LQSSQQLLRGQL*WPSVIAPTVTA Trigger: AGCAGTGACAGTGGGAGCGATGACGGAGGGCCAGCAGAGCTGTCCCCTCAGGAGCTGCTGAGAAGACTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079693.12 |
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| CDS CAA 72 bp | GCAGAGAAACCACCACTAAAGGCTCCGTGGAAGCGCTaGTACCTTCCTTTCTCATCTCTGACAGTCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: AEKPPLKAPWKR*YLPFSSLTVWS Trigger: AGACCAGACTGTCAGAGATGAGAAAGGAAGGTACAAGCGCTTCCACGGAGCCTTTAGTGGTGGTTTCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079693.12 ENSMUST00000131143.2 ENSMUST00000131213.8 |
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| CDS TCA 72 bp | AGGTCCAAGAGCAGATTTGTCCGCCCTGTTCTGTCTTaGAGACACAAAGGTAGAGGGTGTCCATCCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RSKSRFVRPVLS*RHKGRGCPSFL Trigger: AAGGAAGGATGGACACCCTCTACCTTTGTGTCTTCAAGACAGAACAGGGCGGACAAATCTGCTCTTGGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079693.12 ENSMUST00000131143.2 ENSMUST00000131213.8 |
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| CDS TCA 72 bp | CTCCGTGGAAGCGCTTGTACCTTCCTTTCTCATCTCTaGCAGTCTGGTCTTGTAGAGGAATGGGTTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LRGSACTFLSHL*QSGLVEEWVSL Trigger: CAAAGAAACCCATTCCTCTACAAGACCAGACTGTCAGAGATGAGAAAGGAAGGTACAAGCGCTTCCACGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079693.12 ENSMUST00000131143.2 ENSMUST00000131213.8 |
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| CDS GCA 72 bp | GGAAGCAAAATCATCCGTGGTAACAATTGCTTTAGGTaGTATCCCGAATTCACTAAGATCCTCTTCGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GSKIIRGNNCFR*YPEFTKILFVH Trigger: ATGGACGAAGAGGATCTTAGTGAATTCGGGATAGCACCTAAAGCAATTGTTACCACGGATGATTTTGCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079693.12 ENSMUST00000131213.8 |
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